Pregenerated sensors for H2AC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000277075Ensembl transcript IDs: ENST00000303910.4
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGATTTCAGGCATCGTATGTGTATTCCAGCACTTTACAGAAAAGGTGGGTGGCAGAGCCTTTGGTTTCTaGGACTCGGGATCACTGACG | + |
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Preference number: 2 (lower is better) Translates to: EISGIVCVFQHFTEKVGGRAFGF*DSGSLT Trigger: CGTCAGTGATCCCGAGTCCCAGAAACCAAAGGCTCT...GCCACCCACCTTTTCTGTAAAGTGCTGGAATACACATACGATGCCTGAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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| CDS-3UTR GCA 90 bp | AGAGCCTTTGGTTTCTGGGACTCGGGATCACTGACGGATTTGACTAGTAATCATCTTTTGCCCGAGCTTTaGCGCCTTGCTTTCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAFGFWDSGSLTDLTSNHLLPEL*RLAFHV Trigger: GACGTGGAAAGCAAGGCGGCAAAGCTCGGGCAAAAG...ATGATTACTAGTCAAATCCGTCAGTGATCCCGAGTCCCAGAAACCAAAGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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| CDS-3UTR GCA 90 bp | TTTCAGGCATCGTATGTGTATTCCAGCACTTTACAGAAAAGGTGGGTGGCTCTGACGCGTTTTAGCTTTTaGCCGAGCTTTGCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQASYVYSSTLQKRWVALTRFSF*PSFAAL Trigger: CAAGGCGGCAAAGCTCGGGCAAAAGCTAAAACGCGT...CAGAGCCACCCACCTTTTCTGTAAAGTGCTGGAATACACATACGATGCCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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| CDS-3UTR CCA 90 bp | AGATTTCAGGCATCGTATGTGTATTCCAGCACTTTACAGAAAAGGTGGGTGGCTAGAGCCTTTGGTTTCTaGGACTCGGGATCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: RFQASYVYSSTLQKRWVARAFGF*DSGSLT Trigger: CGTCAGTGATCCCGAGTCCCAGAAACCAAAGGCTCT...AGCCACCCACCTTTTCTGTAAAGTGCTGGAATACACATACGATGCCTGAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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| CDS-3UTR GCA 90 bp | AGATTTCAGGCATCGTATGTGTATTCCAGCACTTTACAGAAAAGGTGGGTGGCTAGTAATCATTTCACTTaGCCTTGGCCTTATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RFQASYVYSSTLQKRWVASNHFT*PWPYGG Trigger: GCCACCATAAGGCCAAGGGCAAGTGAAATGATTACT...AGCCACCCACCTTTTCTGTAAAGTGCTGGAATACACATACGATGCCTGAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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| CDS-3UTR CAA 90 bp | GATTTCAGGCATCGTATGTGTATTCCAGCACTTTACAGAAAAGGTGGGTGGCTCGGATCACTGACGGATTaGACTAGTAATCATTTCACT | + |
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Preference number: 5 (lower is better) Translates to: DFRHRMCIPALYRKGGWLGSLTD*TSNHFT Trigger: AGTGAAATGATTACTAGTCAAATCCGTCAGTGATCC...GAGCCACCCACCTTTTCTGTAAAGTGCTGGAATACACATACGATGCCTGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303910.4 |
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