Pregenerated sensors for H2AC6 (Homo sapiens)
Ensembl gene IDs: ENSG00000180573Ensembl transcript IDs: ENST00000314088.6, ENST00000377791.4, ENST00000602637.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTGTATGTTCTCATAGGGAAAGTTCTCCAAGATAGATTGTTATaGAAAGGGCAAGTGCAGAAAAGTCTACACAGTCTGCTACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: ALYVLIGKVLQDRLL*KGQVQKSLHSLLPD Trigger: GTCAGGTAGCAGACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTTTCCCTATGAGAACATACAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR CCA 90 bp | CACTTATTCCTTAGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGAAGCTTTTGCAACCTTAGTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: HLFLRIGKFGRHLGS*HLSEMRSFCNLSAF Trigger: AAAGGCACTAAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCTAAGGAATAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCAACCACCTGGGTAAGTTaGGGGATGGATTCTTTATAT | + |
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Preference number: 2 (lower is better) Translates to: ESSPRVTGIFSSLTTIPATTWVS*GMDSLY Trigger: ATATAAAGAATCCATCCCTCAACTTACCCAGGTGGT...TGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCAGAAAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSPRVTGIFSSLTTIPAERHLGS*HLSEMR Trigger: TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCT...TTCTGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR TCA 90 bp | TCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCAGAAGGCATCTCTCTGAAATaGGAAGCTTTTGCAACCTTA | + |
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Preference number: 2 (lower is better) Translates to: SSPRVTGIFSSLTTIPAEGISLK*EAFATL Trigger: TAAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCC...TTCTGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAATCCTGGCATCTCTCTaGAATGAGAAGCTTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: VESSPRVTGIFSSLTTIPILASL*NEKLLQ Trigger: TTGCAAAAGCTTCTCATTTCAGAGAGATGCCAGGAT...TGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAACCACCTGGGTAAGTTaGGGGATGGATTCTTTATAT | + |
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Preference number: 2 (lower is better) Translates to: VESSPRVTGIFSSLTTIPTTWVS*GMDSLY Trigger: ATATAAAGAATCCATCCCTCAACTTACCCAGGTGGT...TGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCATATGAAAAGGGCAAGTaGAGAAAAGTCTACACAGTC | + |
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Preference number: 2 (lower is better) Translates to: ESSPRVTGIFSSLTTIPAYEKGK*RKVYTV Trigger: GACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATA...TGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCAAGCAGGAATGAATACTaGGCAGATACACAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: ESSPRVTGIFSSLTTIPASRNEY*ADTQEK Trigger: TTTTTCTTGTGTATCTGCCCAGTATTCATTCCTGCT...TGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCTCCAAGATAGATTGTTATGAAAAGGGCAAGTGCAGAAAAGTCTACACAGGCATCTCTCTGAAATaGGAAGCTTTTGCAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: KFSKIDCYEKGKCRKVYTGISLK*EAFATC Trigger: ACAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCC...TGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000602637.1 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCTCCAAGATAGATTGTTATGAAAAGGGCAAGTGCAGAAAAGTCTACACAAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: KFSKIDCYEKGKCRKVYTRHLGS*HLSEMR Trigger: TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCT...TGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCCCTTTGCATTACCTTTTATTACCTCATGCCAGGCTGGAATTTGGGAAAACTTATTCCTTAGAATaGGTAAGTTTGGCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: PLPLHYLLLPHARLEFGKTYSLE*VSLAGT Trigger: AGTGCCTGCCAAACTTACCAATTCTAAGGAATAAGT...TTTCCCAAATTCCAGCCTGGCATGAGGTAATAAAAGGTAATGCAAAGGGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCTCCAAGATAGATTGTTATGAAAAGGGCAAGTGCAGAAAAGTCTACACAGACCACCTGGGTAAGTaGAGGGATGGATTCTTTATA | + |
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Preference number: 3 (lower is better) Translates to: KFSKIDCYEKGKCRKVYTDHLGK*RDGFFI Trigger: TATAAAGAATCCATCCCTCAACTTACCCAGGTGGTC...TGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR TCA 72 bp | GTTCTCATAGGGAAAGTTCTCCAAGATAGATTGTTATaGAAAGGGCAAGTGCAGAAAAGTCTACACAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: VLIGKVLQDRLL*KGQVQKSLHSL Trigger: CAGACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTTTCCCTATGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| 3UTR GCA 72 bp | AAGTTCTCCAAGATAGATTGTTATGAAAAGGGCAAGTaGAGAAAAGTCTACACAGTCTGCTACCTGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: KFSKIDCYEKGK*RKVYTVCYLTR Trigger: TCTTGTCAGGTAGCAGACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTTGATAGCGTTTCCGGGAGCTCAGATACCTGTCAAACCTGTCAAATCACTTaGCCTTGGCCTTGTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGFDSVSGSSDTCQTCQIT*PWPCGD Trigger: GTCACCACAAGGCCAAGGGCAAGTGATTTGACAGGT...TTGACAGGTATCTGAGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000377791.4 |
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| CDS-3UTR GCA 90 bp | GTTGAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAACCTGTCAAATCACTTaGCCTTGGCCTTGTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VESSPRVTGIFSSLTTIPTCQIT*PWPCGD Trigger: GTCACCACAAGGCCAAGGGCAAGTGATTTGACAGGT...TGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTTGATAGCGTTTCCGGGAGCTCAGATACCTGTCAAACCACGTCCAGACATTaGAATCAGACAAAAATCACC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGFDSVSGSSDTCQTTSRH*NQTKIT Trigger: GGTGATTTTTGTCTGATTGCAATGTCTGGACGTGGT...TTGACAGGTATCTGAGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000377791.4 |
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| CDS-3UTR TCA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAGTCTAGCCCAAGAGTaGCTGGAATTTTCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RIGKFGRHLGSWHLSEMRSLAQE*LEFSVH Trigger: GTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACT...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR TCA 90 bp | TCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCAGAAAGTCTAGCCCAAGAGTaGCTGGAATTTTCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SSPRVTGIFSSLTTIPAESLAQE*LEFSVH Trigger: GTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACT...TTCTGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: RIGKFGRHLGSWHLSEMRRHLGS*HLSEMR Trigger: TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCT...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR TCA 90 bp | GTTGAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGGCATCTCTCTGAAATaGGAAGCTTTTGCAACCTTA | + |
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Preference number: 4 (lower is better) Translates to: VESSPRVTGIFSSLTTIPGISLK*EAFATL Trigger: TAAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCC...TGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTTGATAGCGTTTCCGGGAGCTCAGATACCTGTCAAAAAGTCTACACAGTCTaGTACCTGACAAGAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGFDSVSGSSDTCQKVYTV*YLTRMK Trigger: TTTCATTCTTGTCAGGTAGCAGACTGTGTAGACTTT...TTGACAGGTATCTGAGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR GCA 90 bp | GGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAGCTTTTATGAAAAGGGCAAGTaGAGAAAAGTCTACACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GKFGRHLGSWHLSEMRSFYEKGK*RKVYTV Trigger: GACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATA...AAAGCTTCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGACCTTTTATTACCTCATaGCAGGCTGGAATTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RIGKFGRHLGSWHLSEMRPFITS*QAGIWE Trigger: TTCCCAAATTCCAGCCTGGCATGAGGTAATAAAAGG...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCAGCATGCCAGGCTGGAATTTaGGAAATCTGTTTCTATTAC | + |
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Preference number: 4 (lower is better) Translates to: ESSPRVTGIFSSLTTIPACQAGI*EICFYY Trigger: GTAATAGAAACAGATTTCCCAAATTCCAGCCTGGCA...TGCTGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR TCA 90 bp | TTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATCCAGGCATCTCTCTGAAATaGGAAGCTTTTGCAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: FADAESISNVGISNAIHPGISLK*EAFATC Trigger: ACAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCC...TGGATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | GTTGAGTCTAGCCCAAGAGTGACTGGAATTTTCAGTTCACTTACCACCATTCCATGCCAGGCTGGAATTTaGGAAATCTGTTTCTATTAC | + |
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Preference number: 4 (lower is better) Translates to: VESSPRVTGIFSSLTTIPCQAGI*EICFYY Trigger: GTAATAGAAACAGATTTCCCAAATTCCAGCCTGGCA...TGGAATGGTGGTAAGTGAACTGAAAATTCCAGTCACTCTTGGGCTAGACTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | TTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATCCAACCACGTCCAGACATTaGAATCAGACAAAAATCACC | + |
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Preference number: 4 (lower is better) Translates to: FADAESISNVGISNAIHPTTSRH*NQTKIT Trigger: GGTGATTTTTGTCTGATTGCAATGTCTGGACGTGGT...TGGATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAAAGTCTACACAGTCTaGTACCTGACAAGAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: RIGKFGRHLGSWHLSEMRKVYTV*YLTRMK Trigger: TTTCATTCTTGTCAGGTAGCAGACTGTGTAGACTTT...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAGAAATGAGAAGCTTTTaGAACCTGTCAAATCACTTG | + |
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Preference number: 4 (lower is better) Translates to: RIGKFGRHLGSWHLSEMREMRSF*NLSNHL Trigger: CAAGTGATTTGACAGGTTGCAAAAGCTTCTCATTTC...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | CAATTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGA | + |
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Preference number: 4 (lower is better) Translates to: QFADAESISNVGISNAIHRHLGS*HLSEMR Trigger: TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCT...ATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCTTTGCATTACCTTTTATTACCTCATGCCAGGCTGGAATTTGGGAAAAGTGCCTACCAACAGTaGACAGGTTACATAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: PLPLHYLLLPHARLEFGKSAYQQ*TGYIKY Trigger: ATATTTTATGTAACCTGTCCACTGTTGGTAGGCACT...TTTCCCAAATTCCAGCCTGGCATGAGGTAATAAAAGGTAATGCAAAGGGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR CCA 90 bp | TTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATCCATACCTCATGCCAGGCTaGAATTTGGGAAATCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FADAESISNVGISNAIHPYLMPG*NLGNLF Trigger: AAACAGATTTCCCAAATTCCAGCCTGGCATGAGGTA...TGGATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR TCA 90 bp | CTGATATCAGCAGGAATGAATACTGGGCAGATACACAAGAAAAAGAAAAGTGACACCACCTGGGTAAGTTaGGGGATGGATTCTTTATAT | + |
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Preference number: 4 (lower is better) Translates to: LISAGMNTGQIHKKKKSDTTWVS*GMDSLY Trigger: ATATAAAGAATCCATCCCTCAACTTACCCAGGTGGT...GTCACTTTTCTTTTTCTTGTGTATCTGCCCAGTATTCATTCCTGCTGATATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | CTGATATCAGCAGGAATGAATACTGGGCAGATACACAAGAAAAAGAAAAGTGACACCACGTCCAGACATTaGAATCAGACAAAAATCACC | + |
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Preference number: 4 (lower is better) Translates to: LISAGMNTGQIHKKKKSDTTSRH*NQTKIT Trigger: GGTGATTTTTGTCTGATTGCAATGTCTGGACGTGGT...GTCACTTTTCTTTTTCTTGTGTATCTGCCCAGTATTCATTCCTGCTGATATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR TCA 90 bp | CATTCCAGCAGAATAGCAGAGCAATTTCAATTTTGCAGTAAATCAGGGTTAATCATCCTGGCATCTCTCTaGAATGAGAAGCTTTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSSRIAEQFQFCSKSGLIILASL*NEKLLQ Trigger: TTGCAAAAGCTTCTCATTTCAGAGAGATGCCAGGAT...GATTAACCCTGATTTACTGCAAAATTGAAATTGCTCTGCTATTCTGCTGGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | TTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATCCAAGCAGGAATGAATACTaGGCAGATACACAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: FADAESISNVGISNAIHPSRNEY*ADTQEK Trigger: TTTTTCTTGTGTATCTGCCCAGTATTCATTCCTGCT...TGGATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR GCA 90 bp | CATTCCAGCAGAATAGCAGAGCAATTTCAATTTTGCAGTAAATCAGGGTTAATCTATGAAAAGGGCAAGTaGAGAAAAGTCTACACAGTC | + |
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Preference number: 4 (lower is better) Translates to: HSSRIAEQFQFCSKSGLIYEKGK*RKVYTV Trigger: GACTGTGTAGACTTTTCTGCACTTGCCCTTTTCATA...GATTAACCCTGATTTACTGCAAAATTGAAATTGCTCTGCTATTCTGCTGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CCA 90 bp | AAGTTCTCCAAGATAGATTGTTATGAAAAGGGCAAGTGCAGAAAAGTCTACACAAGCAGGAATGAATACTaGGCAGATACACAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: KFSKIDCYEKGKCRKVYTSRNEY*ADTQEK Trigger: TTTTTCTTGTGTATCTGCCCAGTATTCATTCCTGCT...TGTGTAGACTTTTCTGCACTTGCCCTTTTCATAACAATCTATCTTGGAGAACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTTGATAGCGTTTCCGGGAGCTCAGATACCTGTCAAAAAGAGCCTTTGGGTTaGATAGCGTTTCCGGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGFDSVSGSSDTCQKEPLG*IAFPGA Trigger: AGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTT...TTGACAGGTATCTGAGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000377791.4 |
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| CDS-3UTR CAA 90 bp | GGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAGCTTTAAAGAGCCTTTGGGTTaGATAGCGTTTCCGGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: GKFGRHLGSWHLSEMRSFKEPLG*IAFPGA Trigger: AGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTT...AAAGCTTCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTTGATAGCGTTTCCGGGAGCTCAGATACCTGTCAATACCACGTCCAGACATaGCAATCAGACAAAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGFDSVSGSSDTCQYHVQT*QSDKNH Trigger: GTGATTTTTGTCTGATTGCAATGTCTGGACGTGGTA...TTGACAGGTATCTGAGCTCCCGGAAACGCTATCAAACCCAAAGGCTCTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000377791.4 |
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| CDS-3UTR CAA 90 bp | GGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGAAGCTTTTACCACGTCCAGACATaGCAATCAGACAAAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: GKFGRHLGSWHLSEMRSFYHVQT*QSDKNH Trigger: GTGATTTTTGTCTGATTGCAATGTCTGGACGTGGTA...AAAGCTTCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CAA 90 bp | AGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTGGCATCTCTCTGAAATGAGATACCACGTCCAGACATaGCAATCAGACAAAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: RIGKFGRHLGSWHLSEMRYHVQT*QSDKNH Trigger: GTGATTTTTGTCTGATTGCAATGTCTGGACGTGGTA...TCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS CCA 90 bp | CACTTATTCCTTAGAATTGGTAAGTTTGGCAGGCACTTAGGATCCTaGCATCTCTCTGAAATGAGAAGCTTTTGCAACCTGTCAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: HLFLRIGKFGRHLGS*HLSEMRSFCNLSNH Trigger: GTGATTTGACAGGTTGCAAAAGCTTCTCATTTCAGAGAGATGCCAGGATCCTAAGTGCCTGCCAAACTTACCAATTCTAAGGAATAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602637.1 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTTGCATTACCTTTTATTACCTCATGCCAGGCTGGAATTTGGGAAATACTTATTCCTTAGAATaGGTAAGTTTGGCAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: LSLCITFYYLMPGWNLGNTYSLE*VSLAGT Trigger: AGTGCCTGCCAAACTTACCAATTCTAAGGAATAAGT...ATTTCCCAAATTCCAGCCTGGCATGAGGTAATAAAAGGTAATGCAAAGGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR CAA 90 bp | CAATTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATGACCACCTGGGTAAGTaGAGGGATGGATTCTTTATA | + |
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Preference number: 5 (lower is better) Translates to: QFADAESISNVGISNAIHDHLGK*RDGFFI Trigger: TATAAAGAATCCATCCCTCAACTTACCCAGGTGGTC...ATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTTTGCATTACCTTTTATTACCTCATGCCAGGCTGGAATTTGGGAAATATGCCAGGCTGGAATTaGGGAAATCTGTTTCTATTA | + |
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Preference number: 5 (lower is better) Translates to: LSLCITFYYLMPGWNLGNMPGWN*GNLFLL Trigger: TAATAGAAACAGATTTCCCAAATTCCAGCCTGGCAT...ATTTCCCAAATTCCAGCCTGGCATGAGGTAATAAAAGGTAATGCAAAGGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314088.6 |
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| CDS-3UTR CAA 90 bp | CAATTTGCGGATGCAGAATCAATCAGTAATGTAGGAATCAGTAATGCCATCCATATGCCAGGCTGGAATTaGGGAAATCTGTTTCTATTA | + |
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Preference number: 5 (lower is better) Translates to: QFADAESISNVGISNAIHMPGWN*GNLFLL Trigger: TAATAGAAACAGATTTCCCAAATTCCAGCCTGGCAT...ATGGATGGCATTACTGATTCCTACATTACTGATTGATTCTGCATCCGCAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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| CDS-3UTR CAA 90 bp | CATTCCAGCAGAATAGCAGAGCAATTTCAATTTTGCAGTAAATCAGGGTTAATCACTTATTCCTTAGAATaGGTAAGTTTGGCAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: HSSRIAEQFQFCSKSGLITYSLE*VSLAGT Trigger: AGTGCCTGCCAAACTTACCAATTCTAAGGAATAAGT...GATTAACCCTGATTTACTGCAAAATTGAAATTGCTCTGCTATTCTGCTGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314088.6 ENST00000602637.1 |
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