Pregenerated sensors for H2AC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000278463

Ensembl transcript IDs: ENST00000615868.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATAGGAAACTGCAAACCTaGACGAGAAGACCGAGTCTT	+
Preference number: 4 (lower is better) Translates to: RAFAVRLILSADRKTAVHRKLQT*TRRPSL Trigger: AAGACTCGGTCTTCTCGTGCAGGTTTGCAGTTTCCT...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615868.2
CDS-3UTR CCA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATCTCTTCACTTTCCCTTaGCCTTATGATGGCTCTCAG	+
Preference number: 4 (lower is better) Translates to: RAFAVRLILSADRKTAVHLFTFP*PYDGSQ Trigger: CTGAGAGCCATCATAAGGCCAAGGGAAAGTGAAGAG...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615868.2
CDS-3UTR TCA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATGCTGATTTTGTCTGCTaGCAGAAAAACAGCAGTGCA	+
Preference number: 4 (lower is better) Translates to: RAFAVRLILSADRKTAVHADFVC*QKNSSA Trigger: TGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGC...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000615868.2
CDS-3UTR TCA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATCCTTTGCTGTTAGGCTaGTTTTGTCTGCTGACAGAA	+
Preference number: 4 (lower is better) Translates to: RAFAVRLILSADRKTAVHPLLLG*FCLLTE Trigger: TTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGG...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000615868.2
CDS-3UTR TCA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATAAAAACAGCAGTGCATaGAGCGTTAACTCTTCACTT	+
Preference number: 4 (lower is better) Translates to: RAFAVRLILSADRKTAVHKNSSA*SVNSSL Trigger: AAGTGAAGAGTTAACGCTTCATGCACTGCTGTTTTT...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000615868.2
CDS-3UTR CAA 90 bp	AGAGCCTTTGCTGTTAGGCTGATTTTGTCTGCTGACAGAAAAACAGCAGTGCATGCTGTTAGGCTGATTTaGTCTGCTGACAGAAAAACA	+
Preference number: 5 (lower is better) Translates to: RAFAVRLILSADRKTAVHAVRLI*SADRKT Trigger: TGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGC...ATGCACTGCTGTTTTTCTGTCAGCAGACAAAATCAGCCTAACAGCAAAGGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000615868.2

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