Pregenerated sensors for H2AC15 (Homo sapiens)
Ensembl gene IDs: ENSG00000275221Ensembl transcript IDs: ENST00000618958.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAAAAGAACCTTTTTGGTTTGGACCGAGGTATGAGTAATGAACTGCTCCAGCCCCGGCCCACTGGGAACTaGAGACCCGCCCTTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: EKNLFGLDRGMSNELLQPRPTGN*RPALEE Trigger: TTCTTCAAGGGCGGGTCTTCAGTTCCCAGTGGGCCG...GGGCTGGAGCAGTTCATTACTCATACCTCGGTCCAAACCAAAAAGGTTCTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000618958.2 |
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| CDS-3UTR TCA 90 bp | TCTGAAAAGAACCTTTTTGGTTTGGACCGAGGTATGAGTAATGAACTGCTCCAGCTGAAGACCCGCCCTTaGAGAACGGGTCTTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEKNLFGLDRGMSNELLQLKTRP*RTGLSL Trigger: AAGGCTAAGACCCGTTCTTCAAGGGCGGGTCTTCAG...CTGGAGCAGTTCATTACTCATACCTCGGTCCAAACCAAAAAGGTTCTTTTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618958.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGAACCTTTTTGGTTTGGACCGAGGTATGAGTAATGAACTGCTCCAGCCCGTTTGGACCGAGGTATaGGTAATGAACTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKNLFGLDRGMSNELLQPVWTEV*VMNCSS Trigger: GCTGGAGCAGTTCATTACTCATACCTCGGTCCAAAC...GGGCTGGAGCAGTTCATTACTCATACCTCGGTCCAAACCAAAAAGGTTCTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618958.2 |
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| CDS-3UTR CAA 90 bp | TCTGAAAAGAACCTTTTTGGTTTGGACCGAGGTATGAGTAATGAACTGCTCCAGAAGAACCTTTTTGGTTaGGACCGAGGTATGAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEKNLFGLDRGMSNELLQKNLFG*DRGMSN Trigger: ATTACTCATACCTCGGTCCAAACCAAAAAGGTTCTT...CTGGAGCAGTTCATTACTCATACCTCGGTCCAAACCAAAAAGGTTCTTTTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000618958.2 |
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