Pregenerated sensors for H1-8 (Homo sapiens)
Ensembl gene IDs: ENSG00000178804Ensembl transcript IDs: ENST00000324382.7, ENST00000503977.1
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 72 bp | TCCCACCGGGAGGCTGCTGTGGCTCGGGCCTCCTGGTaGGACACCGCCGTGGCTCGGGCCTGGCTTTTCAGA | + |
Preference number: 6 (lower is better) Translates to: SHREAAVARASW*DTAVARAWLFR Trigger: TCTGAAAAGCCAGGCCCGAGCCACGGCGGTGTCCCACCAGGAGGCCCGAGCCACAGCAGCCTCCCGGTGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324382.7 |
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CDS CCA 72 bp | CTGCCAGCACACCGCATCAGACACCTGACGCCCCTCTaGCTCTTCTCCCTGCTTAGCCGCCTGGTCCTGCTG | + |
Preference number: 6 (lower is better) Translates to: LPAHRIRHLTPL*LFSLLSRLVLL Trigger: CAGCAGGACCAGGCGGCTAAGCAGGGAGAAGAGCCAGAGGGGCGTCAGGTGTCTGATGCGGTGTGCTGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503977.1 |