Pregenerated sensors for H1-4 (Homo sapiens)
Ensembl gene IDs: ENSG00000168298Ensembl transcript IDs: ENST00000304218.6
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGGGCCCAGACGCTTTaGGCTTGGCCGCACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGAQTL*AWPHLQ Trigger: CTGCAGGTGCGGCCAAGCGCAAAGCGTCTGGGCCCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCGCTCTTCTTGGGGGTaGCCGCCCCCGTCGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTRSSWG*PPPSPS Trigger: AGAAGGCGACGGGGGCGGCCACCCCCAAGAAGAGCG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTCTTGGCGCTCTTCTTaGGGGTGGCCGCCCCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTSWRSS*GWPPPS Trigger: CGACGGGGGCGGCCACCCCCAAGAAGAGCGCCAAGA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCTTCGCCGCTCCTGCTaGCTTCTTGGCCTTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLRRSC*LLGLGR Trigger: GCGGCCAAGGCCAAGAAGCCAGCAGGAGCGGCGAAG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCCCCCGTCGCCTTCTTaGGCTTCTTCGCCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTPPSPS*ASSPLL Trigger: CAGGAGCGGCGAAGAAGCCCAAGAAGGCGACGGGGG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCGCTTGGCCGCACCTaGAGACTTGCGGGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTALGRT*RLAGLL Trigger: AAGAAGGCCCGCAAGTCTGCAGGTGCGGCCAAGCGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCCAAAGATACGCCGCTaGGCTCCTTGGAGGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTPKIRR*APWRRQ Trigger: TTGCCGCCTCCAAGGAGCGCAGCGGCGTATCTTTGG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCTTCTTCGCCGCTCCTaGTGGCTTCTTGGCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLLRRS*WLLGLG Trigger: GCCAAGGCCAAGAAGCCAGCAGGAGCGGCGAAGAAG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCAGACGCTTTGCGCTTaGCCGCACCTGCAGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTQTLCA*PHLQTC Trigger: GCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGCTGCCGCCTTCTTTaGCTTGGCTGCCTTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGCRLL*LGCLGL Trigger: AAGCCCAAGGCAGCCAAGCCAAAGAAGGCGGCAGCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGTCATAGCCAGCGGCTaGCAGCGCTTTCTTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTVIASG*QRFLES Trigger: GCTCTCAAGAAAGCGCTGGCAGCCGCTGGCTATGAC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGCCTTGGCCGCGCCTaGCTTTTTAGCCTTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGLGRA*LFSLRL Trigger: AAGCCTAAGGCTAAAAAGGCAGGCGCGGCCAAGGCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTTTGGCTCCAGCAGCTaGAGCCGGCTTCTTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTFGSSS*SRLLRL Trigger: AAGGCGAAGAAGCCGGCTGCAGCTGCTGGAGCCAAA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCTTCTTTGGCTTGGCTaGCTTGGGCTTGGCGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLLWLG*LGLGGL Trigger: AAGACCGCCAAGCCCAAGGCAGCCAAGCCAAAGAAG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTGCTTTGGCCTTCGCTaGGCTCTTGGGCGCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTCFGLR*ALGRLF Trigger: AAAAAGGCGCCCAAGAGCCCAGCGAAGGCCAAAGCA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCCTTTGGGTTGTGTTaGGCTTCTAAGCAGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAFGLC*ASKQLA Trigger: GGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCTACTTTTTCTTGGCTaGCGCCTTCTTTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLLFLG*RLLWLG Trigger: GCCAAGCCAAAGAAGGCGGCAGCCAAGAAAAAGTAG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCTTCTTCGCCTTCTTTaGGGTCTTCTTGGCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLLRLL*GLLGAL Trigger: AAGAGCGCCAAGAAGACCCCAAAGAAGGCGAAGAAG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGGCTTCTAAGCAGTTaGCCAAAGGAACTTTCTACT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGLLSS*PKELST Trigger: AGTAGAAAGTTCCTTTGGCCAACTGCTTAGAAGCCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGGGGCCCAGACGCTTaGCGCTTGGCCGCACCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGGPDA*RLAAPA Trigger: TGCAGGTGCGGCCAAGCGCAAAGCGTCTGGGCCCCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCTCCTGCTGGCTTCTaGGCCTTGGCCGCGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAPAGF*ALAAPA Trigger: GGCAGGCGCGGCCAAGGCCAAGAAGCCAGCAGGAGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCCCCCGTCGCCTTCTaGGGCTTCTTCGCCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAPVAF*GFFAAP Trigger: AGGAGCGGCGAAGAAGCCCAAGAAGGCGACGGGGGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCCGCACCTGCAGACTaGCGGGCCTTCTTCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAAPAD*RAFFFT Trigger: CGTGAAGAAGAAGGCCCGCAAGTCTGCAGGTGCGGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTCCAGACGCTTTGCGCTaGGCCGCACCTGCAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTPDALR*AAPADL Trigger: CAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTGG...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTACGCCGCTGCGCTCCTaGGAGGCGGCAACAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTTPLRS*EAATAL Trigger: TAAAGCTGTTGCCGCCTCCAAGGAGCGCAGCGGCGT...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCTGGCTTCTTGGCCTaGGCCGCGCCTGCCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAGFLA*AAPAFL Trigger: TAAAAAGGCAGGCGCGGCCAAGGCCAAGAAGCCAGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCAGTCTCGGACATGTaGAAGGCAAGCGTGAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAVSDM*KASVSE Trigger: CTCGCTCACGCTTGCCTTCAACATGTCCGAGACTGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGCTGCCAGCGCTTTCTaGAGAGCGGCCAAAGATACG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTAASAF*RAAKDT Trigger: CGTATCTTTGGCCGCTCTCAAGAAAGCGCTGGCAGC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTTTTTAGCCTTAGGCTaGGCTTCCCCAGAGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTFLALG*ASPEAA Trigger: GGCGGCCTCTGGGGAAGCCAAGCCTAAGGCTAAAAA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTGGGCTTTTCGCTTTTTaGGCTCCAGCAGCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTGLFAF*APAAAA Trigger: GGCTGCAGCTGCTGGAGCCAAAAAAGCGAAAAGCCC...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTTGGCTGCCTTGGGCTaGGCGGTCTTTGGTTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTLAALG*AVFGLA Trigger: GGCTAAACCAAAGACCGCCAAGCCCAAGGCAGCCAA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTTTGGCTTGGCTGCCTaGGGCTTGGCGGTCTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTFGLAA*GLAVFG Trigger: ACCAAAGACCGCCAAGCCCAAGGCAGCCAAGCCAAA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTTCTTTGGGGTCTTCTaGGCGCTCTTCTTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTFFGVF*ALFLGV Trigger: CACCCCCAAGAAGAGCGCCAAGAAGACCCCAAAGAA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTCTTGGGCGCCTTTTTaGGCTTGGCTGCTTTCGCCT | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTSWAPF*AWLLSP Trigger: AGGCGAAAGCAGCCAAGCCAAAAAAGGCGCCCAAGA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTACTTTCTACTTTTTCTaGGCTGCCGCCTTCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTTFYFF*AAAFFG Trigger: GCCAAAGAAGGCGGCAGCCAAGAAAAAGTAGAAAGT...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTTGGGCTTCTAAGCAGTaGGCCAAAGGAACTTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTWASKQ*AKGTFY Trigger: GTAGAAAGTTCCTTTGGCCAACTGCTTAGAAGCCCA...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTGGCCAAAGGAACTAAAAGAGCCTTTGGGTaGTGTTGGGCTTCTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFGLCWASKQLAKGTKRAFG*CWASKQ Trigger: CTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTT...AGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CCA 72 bp | CGCTCTTCTTGGGGGTGGCCGCCCCCGTCGCCTTCTTaGGCTTCTTCGCCGCTCCTGCTGGCTTCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSSWGWPPPSPS*ASSPLLLASWP Trigger: AGGCCAAGAAGCCAGCAGGAGCGGCGAAGAAGCCCAAGAAGGCGACGGGGGCGGCCACCCCCAAGAAGAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CAA 72 bp | GGCCCAGACGCTTTGCGCTTGGCCGCACCTGCAGACTaGCGGGCCTTCTTCTTCACGGGAGTCTTCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GPDALRLAAPAD*RAFFFTGVFSA Trigger: TGCCGAGAAGACTCCCGTGAAGAAGAAGGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CAA 90 bp | TTTGGCTTGGCTGCCTTGGGCTTGGCGGTCTTTGGTTTAGCCGCCTaGGGTTTAACTGCTTTGGCCTTCGCTGGGCTCTTGGGCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FGLAALGLAVFGLAA*GLTALAFAGLLGAF Trigger: AAAGGCGCCCAAGAGCCCAGCGAAGGCCAAAGCAGTTAAACCCAAGGCGGCTAAACCAAAGACCGCCAAGCCCAAGGCAGCCAAGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CAA 72 bp | GCTGCCTTGGGCTTGGCGGTCTTTGGTTTAGCCGCCTaGGGTTTAACTGCTTTGGCCTTCGCTGGGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AALGLAVFGLAA*GLTALAFAGLL Trigger: CAAGAGCCCAGCGAAGGCCAAAGCAGTTAAACCCAAGGCGGCTAAACCAAAGACCGCCAAGCCCAAGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CCA 72 bp | CTTCTTTGGCTTGGCTGCCTTGGGCTTGGCGGTCTTTaGTTTAGCCGCCTTGGGTTTAACTGCTTTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LLWLGCLGLGGL*FSRLGFNCFGL Trigger: AAGGCCAAAGCAGTTAAACCCAAGGCGGCTAAACCAAAGACCGCCAAGCCCAAGGCAGCCAAGCCAAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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| CDS CCA 72 bp | AAAGAGCCTTTGGGTTGTGTTGGGCTTCTAAGCAGTTaGCCAAAGGAACTTTCTACTTTTTCTTGGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: KEPLGCVGLLSS*PKELSTFSWLP Trigger: CGGCAGCCAAGAAAAAGTAGAAAGTTCCTTTGGCCAACTGCTTAGAAGCCCAACACAACCCAAAGGCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304218.6 |
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