Pregenerated sensors for H1-1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124610

Ensembl transcript IDs: ENST00000244573.5

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	AGATGCACCCGTTGCCTTAGTTTTTGTAGCCACCTTTaGGGCGCCGGGCTTGGTTTCCACGGAGGACGCCTT	+
Preference number: 6 (lower is better) Translates to: RCTRCLSFCSHL*GAGLGFHGGRL Trigger: AAGGCGTCCTCCGTGGAAACCAAGCCCGGCGCCTCAAAGGTGGCTACAAAAACTAAGGCAACGGGTGCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244573.5
CDS CAA 90 bp	GCCGCTTTCTTGGGTTTGGCAGTCTTTGGCTTCGTCACCCTAGCCTaGGCCGCCTTGGGTTTTACAGCCTTAGCTTTAGCAGGGCTTTTA	+
Preference number: 6 (lower is better) Translates to: AAFLGLAVFGFVTLA*AALGFTALALAGLL Trigger: TAAAAGCCCTGCTAAAGCTAAGGCTGTAAAACCCAAGGCGGCCAAGGCTAGGGTGACGAAGCCAAAGACTGCCAAACCCAAGAAAGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244573.5
CDS CAA 72 bp	GCAGTCTTTGGCTTCGTCACCCTAGCCTTGGCCGCCTaGGGTTTTACAGCCTTAGCTTTAGCAGGGCTTTTA	+
Preference number: 6 (lower is better) Translates to: AVFGFVTLALAA*GFTALALAGLL Trigger: TAAAAGCCCTGCTAAAGCTAAGGCTGTAAAACCCAAGGCGGCCAAGGCTAGGGTGACGAAGCCAAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244573.5
CDS CAA 72 bp	TTGGGTTTGGCAGTCTTTGGCTTCGTCACCCTAGCCTaGGCCGCCTTGGGTTTTACAGCCTTAGCTTTAGCA	+
Preference number: 6 (lower is better) Translates to: LGLAVFGFVTLA*AALGFTALALA Trigger: TGCTAAAGCTAAGGCTGTAAAACCCAAGGCGGCCAAGGCTAGGGTGACGAAGCCAAAGACTGCCAAACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244573.5
CDS CAA 90 bp	TTGGGTTTGGCAGTCTTTGGCTTCGTCACCCTAGCCTTGGCCGCCTaGGGTTTTACAGCCTTAGCTTTAGCAGGGCTTTTAGCTACTTTC	+
Preference number: 6 (lower is better) Translates to: LGLAVFGFVTLALAA*GFTALALAGLLATF Trigger: GAAAGTAGCTAAAAGCCCTGCTAAAGCTAAGGCTGTAAAACCCAAGGCGGCCAAGGCTAGGGTGACGAAGCCAAAGACTGCCAAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244573.5

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