Pregenerated sensors for GZMH (Homo sapiens)
Ensembl gene IDs: ENSG00000100450Ensembl transcript IDs: ENST00000216338.9, ENST00000382548.4, ENST00000557220.6
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTaGGGATTCTTGCCTCTGTCCCAGAGATGGTCAGGCCCAGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: RDPFITVLQPRLPTP*GFLPLSQRWSGPEE Trigger: TTCCTCTGGGCCTGACCATCTCTGGGACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| 3UTR CCA 72 bp | TTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTaGGGATTCTTGCCTCTGTCCCAGAGATGGTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FITVLQPRLPTP*GFLPLSQRWSG Trigger: GCCTGACCATCTCTGGGACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR TCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGGAGCTTCCCTGGCAGTaGGCAGCTGTCAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGELPWQ*AAVSTK Trigger: CTTTGTGCTGACAGCTGCTCACTGCCAGGGAAGCTC...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000216338.9 ENST00000382548.4 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGCGACTGCCCACCCCTTaGGGATTCTTGCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGRLPTP*GFLPLS Trigger: GGACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCG...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGAGCTTCCCTGGCAGTaGGCAGCTGTCAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGELPWQ*AAVSTK Trigger: CTTTGTGCTGACAGCTGCTCACTGCCAGGGAAGCTC...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216338.9 ENST00000382548.4 |
||
| CDS-3UTR TCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCCCCGGAGTCCCCCTTaGAACCGGTCTGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWPRSPP*NRSVSS Trigger: AGAAGACACAGACCGGTTTCAAGGGGGACTCCGGGG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCCCCTTGGGGATTCTTaGCTCTGTCCCAGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGPLGDS*LCPRDG Trigger: ACCATCTCTGGGACAGAGGCAAGAATCCCCAAGGGG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCGACTGCCCACCCCTTaGGGATTCTTGCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWRLPTP*GFLPLS Trigger: GGACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGCCAGGGCAGGAAGTGTaGGACCTTGATGTAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGPGQEV*DLDVDS Trigger: GGAGTCTACATCAAGGTCTCACACTTCCTGCCCTGG...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGTTTTCTCAGGAAGGCTaGCCAGGTCAGAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGFSQEG*PGQSCW Trigger: CCAACAGCTCTGACCTGGGCAGCCTTCCTGAGAAAA...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCATTTATTACAGTCCTaGAACCCCGACTGCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGHLLQS*NPDCPP Trigger: GGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGCGACTGCCCACCCCTTaGGGATTCTTGCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLRLPTP*GFLPLS Trigger: GGACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCG...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGCATTTATTACAGTCCTaGAACCCCGACTGCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGHLLQS*NPDCPP Trigger: GGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATG...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGTTTTCTCAGGAAGGCTaGCCAGGTCAGAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWFSQEG*PGQSCW Trigger: CCAACAGCTCTGACCTGGGCAGCCTTCCTGAGAAAA...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCACTGGCAGTCCTTCTaGACTGTCAGCAACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWHWQSF*TVSNTS Trigger: GGAAGTGTTGCTGACAGTGCAGAAGGACTGCCAGTG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGGAAGGTTAGTCTCATaGCTGCTGTTAGAGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGGRLVS*LLLEAL Trigger: AAGCGCCTCTAACAGCAGGCATGAGACTAACCTTCC...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGCCCCTTGGGGATTCTTaGCTCTGTCCCAGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLPLGDS*LCPRDG Trigger: ACCATCTCTGGGACAGAGGCAAGAATCCCCAAGGGG...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCATTTATTACAGTCCTaGAACCCCGACTGCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWHLLQS*NPDCPP Trigger: GGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCCTTCCAGAAACAAATaGTGGAGGGAGATGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGPSRNK*WREMKE Trigger: CTCCTTCATCTCCCTCCAGCATTTGTTTCTGGAAGG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382548.4 |
||
| CDS-3UTR GCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGTTTTCTCAGGAAGGCTaGCCAGGTCAGAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLFSQEG*PGQSCW Trigger: CCAACAGCTCTGACCTGGGCAGCCTTCCTGAGAAAA...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGAAGAGACGTTCACACTaGCAGTCCTTCTGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWKRRSH*QSFCTV Trigger: GACAGTGCAGAAGGACTGCCAGTGTGAACGTCTCTT...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCCACACAAATCTCAGTaGCTCTGCTGTAATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HQRSIYYSPATPTAHPLGPHKSQ*LCCNCH Trigger: ATGGCAATTACAGCAGAGCCACTGAGATTTGTGTGG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR TCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGCAGAGCTGTTGGTGTTaGCTCCTTCCAGAAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGQSCWC*LLPETN Trigger: ATTTGTTTCTGGAAGGAGTCAACACCAACAGCTCTG...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216338.9 ENST00000382548.4 |
||
| CDS-3UTR GCA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGTGTGGTTGCTAAAGTaGTCATTGAGACATAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGVWLLK*SLRHNP Trigger: GGGGTTATGTCTCAATGAGCACTTTAGCAACCACAC...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR GCA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGTGGCTCTGCTGTAATTaGCATGGAAGAGACGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTRDPFITVLQPRLPTPWWLCCN*HGRDVH Trigger: GTGAACGTCTCTTCCATGGCAATTACAGCAGAGCCA...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR GCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGAAGGTTAGTCTCATaGCTGCTGTTAGAGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLGRLVS*LLLEAL Trigger: AAGCGCCTCTAACAGCAGGCATGAGACTAACCTTCC...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR GCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGTCAGCAACACTTCCTaGAGTGTGGTTGCTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLVSNTS*SVVAKV Trigger: CACTTTAGCAACCACACTGCAGGAAGTGTTGCTGAC...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR GCA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGAAATCTCAGTGGCTCTaGTGTAATTGCCATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHQRSIYYSPATPTAHPLKSQWL*CNCHGR Trigger: TCTTCCATGGCAATTACAGCAGAGCCACTGAGATTT...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGCCGACTGCCCACCCCTaGGGGATTCTTGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGPTAHP*GILASV Trigger: GACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCGG...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CAA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCCGACTGCCCACCCCTaGGGGATTCTTGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YTRDPFITVLQPRLPTPWPTAHP*GILASV Trigger: GACAGAGGCAAGAATCCCCAAGGGGTGGGCAGTCGG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CAA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGCCCCCGGAGTCCCCCTaGAAACCGGTCTGTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHQRSIYYSPATPTAHPLPPESP*KPVCVF Trigger: GAAGACACAGACCGGTTTCAAGGGGGACTCCGGGGG...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS GCA 90 bp | GCCTCTGTCCCAGAGATGGTCAGGCCCAGAGGAAGGTTAGTCTCATaGCTGCTGTTAGAGGCGCTTCATTGTTCTCTTTATCCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASVPEMVRPRGRLVS*LLLEALHCSLYPGQ Trigger: CTGCCCTGGATAAAGAGAACAATGAAGCGCCTCTAACAGCAGGCATGAGACTAACCTTCCTCTGGGCCTGACCATCTCTGGGACAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS CCA 90 bp | CACACTGGCAGTCCTTCTGCACTGTCAGCAACACTTCCTGCAGTGTaGTTGCTAAAGTGCTCATTGAGACATAACCCCAGCCAGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HTGSPSALSATLPAV*LLKCSLRHNPSQPH Trigger: GTGTGGCTGGCTGGGGTTATGTCTCAATGAGCACTTTAGCAACCACACTGCAGGAAGTGTTGCTGACAGTGCAGAAGGACTGCCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CAA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCTTCCGACTCTTCTCTaGCAGAAACTGAACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HQRSIYYSPATPTAHPLGLPTLL*QKLNKG Trigger: GCCTTTGTTCAGTTTCTGCAAGAGAAGAGTCGGAAG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CAA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGCTTCCTGCAGTGTGGTaGCTAAAGTGCTCATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQRSIYYSPATPTAHPLGLPAVW*LKCSLR Trigger: TCTCAATGAGCACTTTAGCAACCACACTGCAGGAAG...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CAA 90 bp | CACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGGTCAGAGCTGTTGGTGTaGACTCCTTCCAGAAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: HQRSIYYSPATPTAHPLGSELLV*TPSRNK Trigger: TTTGTTTCTGGAAGGAGTCAACACCAACAGCTCTGA...CCCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000216338.9 ENST00000382548.4 |
||
| CDS-3UTR CAA 90 bp | ACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGGTTGCTAAAGTGCTCATaGAGACATAACCCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPEIHLLQSCNPDCPPLGLLKCS*RHNPSQ Trigger: CTGGCTGGGGTTATGTCTCAATGAGCACTTTAGCAA...CCCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS GCA 90 bp | CGGTCTGTGTCTTCTTTGGATCCCCCACACAAATCTCAGTGGCTCTaGTGTAATTGCCATGGAAGAGACGTTCACACTGGCAGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSVSSLDPPHKSQWL*CNCHGRDVHTGSPS Trigger: AGAAGGACTGCCAGTGTGAACGTCTCTTCCATGGCAATTACAGCAGAGCCACTGAGATTTGTGTGGGGGATCCAAAGAAGACACAGACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CAA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGCTTCCGACTCTTCTCTaGCAGAAACTGAACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTRDPFITVLQPRLPTPWLPTLL*QKLNKG Trigger: GCCTTTGTTCAGTTTCTGCAAGAGAAGAGTCGGAAG...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS-3UTR CAA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGCGGTCTGTGTCTTCTTaGGATCCCCCACACAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LHQRSIYYSPATPTAHPLRSVSS*DPPHKS Trigger: AGATTTGTGTGGGGGATCCAAAGAAGACACAGACCG...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS-3UTR CAA 90 bp | TACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGGTCAGAGCTGTTGGTGTaGACTCCTTCCAGAAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: YTRDPFITVLQPRLPTPWSELLV*TPSRNK Trigger: TTTGTTTCTGGAAGGAGTCAACACCAACAGCTCTGA...CCAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000216338.9 ENST00000382548.4 |
||
| CDS-3UTR CAA 90 bp | TTACACCAGAGATCCATTTATTACAGTCCTGCAACCCCGACTGCCCACCCCTTGCTTCCGACTCTTCTCTaGCAGAAACTGAACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHQRSIYYSPATPTAHPLLPTLL*QKLNKG Trigger: GCCTTTGTTCAGTTTCTGCAAGAGAAGAGTCGGAAG...CAAGGGGTGGGCAGTCGGGGTTGCAGGACTGTAATAAATGGATCTCTGGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS GCA 72 bp | GATCCCCCACACAAATCTCAGTGGCTCTGCTGTAATTaGCATGGAAGAGACGTTCACACTGGCAGTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DPPHKSQWLCCN*HGRDVHTGSPS Trigger: AGAAGGACTGCCAGTGTGAACGTCTCTTCCATGGCAATTACAGCAGAGCCACTGAGATTTGTGTGGGGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS GCA 72 bp | TCTTCTTTGGATCCCCCACACAAATCTCAGTGGCTCTaGTGTAATTGCCATGGAAGAGACGTTCACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLDPPHKSQWL*CNCHGRDVHTG Trigger: GCCAGTGTGAACGTCTCTTCCATGGCAATTACAGCAGAGCCACTGAGATTTGTGTGGGGGATCCAAAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||
| CDS GCA 72 bp | CCAGAGATGGTCAGGCCCAGAGGAAGGTTAGTCTCATaGCTGCTGTTAGAGGCGCTTCATTGTTCTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PEMVRPRGRLVS*LLLEALHCSLY Trigger: ATAAAGAGAACAATGAAGCGCCTCTAACAGCAGGCATGAGACTAACCTTCCTCTGGGCCTGACCATCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000216338.9 ENST00000382548.4 ENST00000557220.6 |
||
| CDS CCA 72 bp | TCTGTGTCTTCTTTGGATCCCCCACACAAATCTCAGTaGCTCTGCTGTAATTGCCATGGAAGAGACGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVSSLDPPHKSQ*LCCNCHGRDVH Trigger: GTGAACGTCTCTTCCATGGCAATTACAGCAGAGCCACTGAGATTTGTGTGGGGGATCCAAAGAAGACACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216338.9 |
||