RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GZF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125812

Ensembl transcript IDs: ENST00000338121.10, ENST00000377051.2, ENST00000424216.1, ENST00000461789.1, ENST00000477239.1

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCTCGCTTCCACTCAGCATGGCTGTGCTTGGACTTGGAGGAATaGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAG +
Preference number: 1 (lower is better)
Translates to: WPRFHSAWLCLDLEE*GRCSRRSSVTSPLQ
Trigger: CTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCCATGCTGAGTGGAAGCGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 90 bp GAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTaGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATG +
Preference number: 1 (lower is better)
Translates to: ERHCAGTWPLSSLHT*DQSTQMVASLPLSM
Trigger: CATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 90 bp AAATGGCCCTTCTTGAGGCTCTGGGAGAGGCACTGTGCCGGCACCTaGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATG +
Preference number: 1 (lower is better)
Translates to: KWPFLRLWERHCAGT*PLSSLHTWDQSTQM
Trigger: CATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 90 bp GGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTaGCCTCGCTTCCACTCAGCATGGCTGTGCTTGGACTTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: GHFPHYTLGTNPLRW*PRFHSAWLCLDLEE
Trigger: TTCCTCCAAGTCCAAGCACAGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 90 bp GGAAAATGGTTGAAGCAAGCTCCTAAATGGCCCTTCTTGAGGCTCTaGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACAC +
Preference number: 1 (lower is better)
Translates to: GKWLKQAPKWPFLRL*ERHCAGTWPLSSLH
Trigger: GTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTTAGGAGCTTGCTTCAACCATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR GCA 90 bp GGTAAGTGTGCTGAGACTTTTGGTCCCTACTGCTATGTTCTCACATaGTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTTTCCATC +
Preference number: 1 (lower is better)
Translates to: GKCAETFGPYCYVLT*SQGNRHVSYLPVSI
Trigger: GATGGAAACAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGTAGGGACCAAAAGTCTCAGCACACTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 90 bp CATCTTTGCACATGGACAATTATTTTTCTTAGCCCCACATCATCTTaGGTTCAGCTACCACACACGCAGACTAACAGGATGGGAACTGCT +
Preference number: 1 (lower is better)
Translates to: HLCTWTIIFLSPTSS*VQLPHTQTNRMGTA
Trigger: AGCAGTTCCCATCCTGTTAGTCTGCGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATGTGCAAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR GCA 90 bp GCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTaGCTGTTTCCATCTCTAGGTGTGGAAATGAGAAGTCTGGGTTTC +
Preference number: 1 (lower is better)
Translates to: AMFSHAPKEIDMSVT*LFPSLGVEMRSLGF
Trigger: GAAACCCAGACTTCTCATTTCCACACCTAGAGATGGAAACAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 90 bp AATGTATATAGTAGAAGTCGTATCTTTGATGCCTACTTTTTACATTaGAGAAAGTGGCAGAGAGCTCAACCGCACTTCCAGCCCGGTTGT +
Preference number: 1 (lower is better)
Translates to: NVYSRSRIFDAYFLH*RKWQRAQPHFQPGC
Trigger: ACAACCGGGCTGGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAAAGATACGACTTCTACTATATACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 90 bp CCAACTGGGATCCAAGCAGTTAAACAGCTTAATCCTAGGACTGTATaGAATAAAGGCTTATGGACCCGGATTTTACATTTCATTATTCAC +
Preference number: 1 (lower is better)
Translates to: PTGIQAVKQLNPRTV*NKGLWTRILHFIIH
Trigger: GTGAATAATGAAATGTAAAATCCGGGTCCATAAGCCTTTATTTCATACAGTCCTAGGATTAAGCTGTTTAACTGCTTGGATCCCAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 90 bp CAAGAATTAGAACGATTAGCACATACACCCTACACCAGAATTAAGTaGGGTTATGTTCACTGCCTTTTTGTCAATAAAGTAGCTGAGATC +
Preference number: 1 (lower is better)
Translates to: QELERLAHTPYTRIK*GYVHCLFVNKVAEI
Trigger: GATCTCAGCTACTTTATTGACAAAAAGGCAGTGAACATAACCTCACTTAATTCTGGTGTAGGGTGTATGTGCTAATCGTTCTAATTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 90 bp GGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTaGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCAT +
Preference number: 2 (lower is better)
Translates to: GEALCRHLATFLITH*GPIHSDGGLASTQH
Trigger: ATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAAGCCCCACATCATCTTaGGTTCAGCTACCACACACG +
Preference number: 2 (lower is better)
Translates to: LGEALCRHLATFLITHLGSPTSS*VQLPHT
Trigger: CGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCT...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTGCAGAGGCCATTCTTaGCCACATCTTTGCACATGG +
Preference number: 2 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGCRGHS*PHLCTW
Trigger: CCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAAATCCACTCAGATGGTaGCCTCGCTTCCACTCAGCA +
Preference number: 2 (lower is better)
Translates to: LGEALCRHLATFLITHLGNPLRW*PRFHSA
Trigger: TGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATT...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATACACCAGAATTAAGTaGGGTTATGTTCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: ESSTALPARLWPAHEQRPYTRIK*GYVHCL
Trigger: AAGGCAGTGAACATAACCTCACTTAATTCTGGTGTA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACACTCAGCATGGCTGTaGTTGGACTTGGAGGAATGG +
Preference number: 2 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRHSAWL*LDLEEW
Trigger: CCATTCCTCCAAGTCCAAGCACAGCCATGCTGAGTG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATTTACTGCCTACAAATaGGGGGTGGGGAGGAATGAA +
Preference number: 2 (lower is better)
Translates to: LGEALCRHLATFLITHLGFTAYK*GVGRNE
Trigger: TTCATTCCTCCCCACCCCCCATTTGTAGGCAGTAAA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAGTTGTGGCCTGCGCATaGGCAGAGGCCAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREVVACA*AEARIS
Trigger: AGAAATCCTGGCCTCTGCTCATGCGCAGGCCACAAC...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCACTCAGCATGGCTGTaGTTGGACTTGGAGGAATGG +
Preference number: 2 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASHSAWL*LDLEEW
Trigger: CCATTCCTCCAAGTCCAAGCACAGCCATGCTGAGTG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTTGGGACAAAGTTACTaGTTCTTCACAATCAACTCT +
Preference number: 2 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGLGQSY*FFTINS
Trigger: AGAGTTGATTGTGAAGAACCAGTAACTTTGTCCCAA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCATTTCACAAGCACGTaGCACATACTCAAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASHFTST*HILKAL
Trigger: TAGGGCCTTGAGTATGTGCCACGTGCTTGTGAAATG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTAGGTTCGGTCTCCTCTaGATGTATGACAGTCATTAT +
Preference number: 2 (lower is better)
Translates to: HTWDQSTQMVASLPLSMARFGLL*MYDSHY
Trigger: ATAATGACTGTCATACATCCAGAGGAGACCGAACCT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGCCTACTTTTTACATTaGAGAAAGTGGCAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRAYFLH*RKWQRA
Trigger: AGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 90 bp GGAGTTTGGGCTGACAGCATTTCACAGAAAATGGTTGGAAAATGGTaGAAGCAAGCTCCTAAATGGCCCTTCTTGAGGCTCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GVWADSISQKMVGKW*KQAPKWPFLRLWER
Trigger: CCTCTCCCAGAGCCTCAAGAAGGGCCATTTAGGAGCTTGCTTCAACCATTTTCCAACCATTTTCTGTGAAATGCTGTCAGCCCAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAAGCCAAAGAAGCATTTaGGACAAAGTTACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRSQRSI*DKVTGS
Trigger: AGAACCAGTAACTTTGTCCCAAATGCTTCTTTGGCT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGAGCCCCACATCATCTTaGGTTCAGCTACCACACACG +
Preference number: 2 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSPTSS*VQLPHT
Trigger: CGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTGCTATGTTCTCACATaGTCCCAAGGAAATAGACAT +
Preference number: 2 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASCYVLT*SQGNRH
Trigger: ATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTGCAGAGGCCATTCTTaGCCACATCTTTGCACATGG +
Preference number: 2 (lower is better)
Translates to: LMPTFYIEESGRELNRTSCRGHS*PHLCTW
Trigger: CCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAGCTGTGATAAAGCCGTaGAAGTTAGCAGAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSAVIKP*KLAEVQ
Trigger: CTGAACTTCTGCTAACTTGCACGGCTTTATCACAGC...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGCTGTGATAAAGCCGTaGAAGTTAGCAGAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCAVIKP*KLAEVQ
Trigger: CTGAACTTCTGCTAACTTGCACGGCTTTATCACAGC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTTTTACTGCCTACAAATaGGGGGTGGGGAGGAATGAA +
Preference number: 2 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIFTAYK*GVGRNE
Trigger: TTCATTCCTCCCCACCCCCCATTTGTAGGCAGTAAA...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGCAGGGAAGAAATGACTaGAAATATGTGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLQGRND*KYVAPV
Trigger: AACTGGGGCCACATATTTTCAGTCATTTCTTCCCTG...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTAATCCTAGGACTGTATaGAATAAAGGCTTATGGACC +
Preference number: 2 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCNPRTV*NKGLWT
Trigger: GGTCCATAAGCCTTTATTTCATACAGTCCTAGGATT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTACTTTTGGTCCCTACTaGTATGTTCTCACATGCTCC +
Preference number: 2 (lower is better)
Translates to: NLVKRKAAHPFGVWADSITFGPY*YVLTCS
Trigger: GGAGCATGTGAGAACATAGCAGTAGGGACCAAAAGT...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 90 bp GACAAACTTCCTAGCTGCGTATGTGCTGAGATTACGCTAGCAGTTTaGCAGGTGTTCAATCTGTCAGTCATACTTTGTTTACTGCCTACA +
Preference number: 2 (lower is better)
Translates to: DKLPSCVCAEITLAV*QVFNLSVILCLLPT
Trigger: TGTAGGCAGTAAACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGCACATACGCAGCTAGGAAGTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 90 bp TGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTaGCCTGTTTCCATCTCTAGGTGTGGAAATGAGAAGTCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: CYVLTCSQGNRHVSY*PVSISRCGNEKSGF
Trigger: AAACCCAGACTTCTCATTTCCACACCTAGAGATGGAAACAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATAAGTTCAGGAAAATCTaGAGAGGCCATTCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNKFRKI*RGHSCP
Trigger: TGGGCAAGAATGGCCTCTGCAGATTTTCCTGAACTT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCACTGTGTTCTATAATTTaGCACAGTCACCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSLCSII*HSHLIL
Trigger: CAAAATGAGGTGACTGTGGCAAATTATAGAACACAG...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATGACATGTCAGTTACTTaGCTGTTTCCATCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNDMSVT*LFPSLG
Trigger: ACCTAGAGATGGAAACAGGCAAGTAACTGACATGTC...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTAGAAGTCTGGGTTTCTaGAAATTACAGAAATCAAGT +
Preference number: 2 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCRSLGF*KLQKSS
Trigger: ACTTGATTTCTGTAATTTCCAGAAACCCAGACTTCT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGCAATAATTAAGTCCTaGATGAAACAGCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: LMPTFYIEESGRELNRTSAIIKS*MKQPKK
Trigger: CTTCTTTGGCTGTTTCATGCAGGACTTAATTATTGC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTTCTTGCCCACATCTTTaGACATGGACAATTATTTTT +
Preference number: 2 (lower is better)
Translates to: NLVKRKAAHPFGVWADSISCPHL*TWTIIF
Trigger: AAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGA...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTCTTGCCCACATCTTTaGACATGGACAATTATTTTT +
Preference number: 2 (lower is better)
Translates to: LMPTFYIEESGRELNRTSSCPHL*TWTIIF
Trigger: AAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 90 bp TCTGTTCTCAGGGACAGAGAAATGTATATAGTAGAAGTCGTATCTTaGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: SVLRDREMYIVEVVS*MPTFYIEESGRELN
Trigger: GTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAAAGATACGACTTCTACTATATACATTTCTCTGTCCCTGAGAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 72 bp GTGGCAGAGAGCTCAACCGCACTTCCAGCCCGGTTGTaGCCTGCGCATGAGCAGAGGCCAGGATTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: VAESSTALPARL*PAHEQRPGFLL
Trigger: GAGGAGAAATCCTGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGGCTGTGCTTGGACTaGGAGGAATGGGGCAGATGC +
Preference number: 3 (lower is better)
Translates to: LGEALCRHLATFLITHLGWLCLD*EEWGRC
Trigger: GCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAAGACATGTCAGTTACTaGCCTGTTTCCATCTCTAGG +
Preference number: 3 (lower is better)
Translates to: ESSTALPARLWPAHEQRPRHVSY*PVSISR
Trigger: CCTAGAGATGGAAACAGGCAAGTAACTGACATGTCT...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 72 bp TGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTaGGACCAATCCACTCAGATGGTGGCCTCGCTTCCA +
Preference number: 3 (lower is better)
Translates to: CAGTWPLSSLHT*DQSTQMVASLP
Trigger: TGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAGTTTTGCTAGACTCTTaGGTAGGACAGCTTTTACCT +
Preference number: 3 (lower is better)
Translates to: ESSTALPARLWPAHEQRPVLLDS*VGQLLP
Trigger: AGGTAAAAGCTGTCCTACCAAAGAGTCTAGCAAAAC...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTAGTGTGCTGAGACTTTaGGTCCCTACTGCTATGTTC +
Preference number: 3 (lower is better)
Translates to: HTWDQSTQMVASLPLSMASVLRL*VPTAMF
Trigger: GAACATAGCAGTAGGGACCAAAAGTCTCAGCACACT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGCCTACTTTTTACATaGAAGAAAGTGGCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: LGEALCRHLATFLITHLGCLLFT*KKVAES
Trigger: GCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTTTCTTCAGTTGCATTaGAGGGTCCCCACAGAAAAT +
Preference number: 3 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAFLQLH*RVPTEN
Trigger: ATTTTCTGTGGGGACCCTCAAATGCAACTGAAGAAA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTGCCTACTTTTTACATaGAAGAAAGTGGCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: HTWDQSTQMVASLPLSMACLLFT*KKVAES
Trigger: GCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAATTACGCTAGCAGTTTaGCAGGTGTTCAATCTGTCA +
Preference number: 3 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRITLAV*QVFNLS
Trigger: TGACAGATTGAACACCTGCAAAACTGCTAGCGTAAT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTCTGCAGAGGCCATTCTaGCCCACATCTTTGCACATG +
Preference number: 3 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVLQRPF*PTSLHM
Trigger: CATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCAG...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTCACAGAAAATCTGATTaGCTTCAATTCAACAGGGAA +
Preference number: 3 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAHRKSD*LQFNRE
Trigger: TTCCCTGTTGAATTGAAGCAAATCAGATTTTCTGTG...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTTTCTTCAGTTGCATTaGAGGGTCCCCACAGAAAAT +
Preference number: 3 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASFLQLH*RVPTEN
Trigger: ATTTTCTGTGGGGACCCTCAAATGCAACTGAAGAAA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAATCTGTCAGTCATACTTaGTTTACTGCCTACAAATGG +
Preference number: 3 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRESVSHT*FTAYKW
Trigger: CCATTTGTAGGCAGTAAACAAAGTATGACTGACAGA...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 72 bp GAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTaGTTCAGTTCTCTGTACTCTGCAATTAAGACCAGC +
Preference number: 3 (lower is better)
Translates to: EARKTANYNIRS*FSSLYSAIKTS
Trigger: GCTGGTCTTAATTGCAGAGTACAGAGAACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATCTGTCAGTCATACTTaGTTTACTGCCTACAAATGG +
Preference number: 3 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSSVSHT*FTAYKW
Trigger: CCATTTGTAGGCAGTAAACAAAGTATGACTGACAGA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCACACAGAAAATCTGATTaGCTTCAATTCAACAGGGAA +
Preference number: 3 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSHRKSD*LQFNRE
Trigger: TTCCCTGTTGAATTGAAGCAAATCAGATTTTCTGTG...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGTTTTGCTAGACTCTTaGGTAGGACAGCTTTTACCT +
Preference number: 3 (lower is better)
Translates to: LMPTFYIEESGRELNRTSVLLDS*VGQLLP
Trigger: AGGTAAAAGCTGTCCTACCAAAGAGTCTAGCAAAAC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 72 bp ACATGGACAATTATTTTTCTTAGCCCCACATCATCTTaGGTTCAGCTACCACACACGCAGACTAACAGGATG +
Preference number: 3 (lower is better)
Translates to: TWTIIFLSPTSS*VQLPHTQTNRM
Trigger: CATCCTGTTAGTCTGCGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 72 bp AGTAGAAGTCGTATCTTTGATGCCTACTTTTTACATTaGAGAAAGTGGCAGAGAGCTCAACCGCACTTCCAG +
Preference number: 3 (lower is better)
Translates to: SRSRIFDAYFLH*RKWQRAQPHFQ
Trigger: CTGGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAAAGATACGACTTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 72 bp CAATCTGTCAGTCATACTTTGTTTACTGCCTACAAATaGGGGGTGGGGAGGAATGAATGCAACAATCTATTT +
Preference number: 3 (lower is better)
Translates to: QSVSHTLFTAYK*GVGRNECNNLF
Trigger: AAATAGATTGTTGCATTCATTCCTCCCCACCCCCCATTTGTAGGCAGTAAACAAAGTATGACTGACAGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CCA 72 bp AAGCACTTAGGAAGAAAGTCTTCCCTCATTAATTTCTaGCATAGTGCAGCTACATGTTCATTCTGGAACTTA +
Preference number: 3 (lower is better)
Translates to: KHLGRKSSLINF*HSAATCSFWNL
Trigger: TAAGTTCCAGAATGAACATGTAGCTGCACTATGCCAGAAATTAATGAGGGAAGACTTTCTTCCTAAGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 72 bp GAACGATTAGCACATACACCCTACACCAGAATTAAGTaGGGTTATGTTCACTGCCTTTTTGTCAATAAAGTA +
Preference number: 3 (lower is better)
Translates to: ERLAHTPYTRIK*GYVHCLFVNKV
Trigger: TACTTTATTGACAAAAAGGCAGTGAACATAACCTCACTTAATTCTGGTGTAGGGTGTATGTGCTAATCGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR TCA 72 bp ATCCAAGCAGTTAAACAGCTTAATCCTAGGACTGTATaGAATAAAGGCTTATGGACCCGGATTTTACATTTC +
Preference number: 3 (lower is better)
Translates to: IQAVKQLNPRTV*NKGLWTRILHF
Trigger: GAAATGTAAAATCCGGGTCCATAAGCCTTTATTTCATACAGTCCTAGGATTAAGCTGTTTAACTGCTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATTGAGCGCGGACGGCTaGGAGAACCTGGCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPLSADG*ENLAPH
Trigger: GTGCGGCGCCAGGTTCTCGCAGCCGTCCGCGCTCAA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAGGTACACCACCTCGGTaGCCACGCCGTGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPGTPPR*PRRGGA
Trigger: AGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACC...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAGTGAGACCACTGGGGTaGGGGCCATCGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPVRPLG*GPSVAT
Trigger: TGTGGCCACCGATGGCCCTCACCCCAGTGGTCTCAC...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACCTGCTCCATCTCCGTaGCCACCCTGTCCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPPAPSP*PPCPGF
Trigger: AAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCGGTTGGCGAAGGTCTaGCCGCAGGTGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGRLAKV*PQVSQR
Trigger: CCGCTGCGACACCTGCGGCCAGACCTTCGCCAACCG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAGTCACGTCACACAGGTaGCCCAGGAGGCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPVTSHR*PRRRSS
Trigger: TGAGCTTCGCCTCCTGGGTCACCTGTGTGACGTGAC...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGGTCTCCCGTGTGTGTaGGCTCGTGCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGGLPCV*ARAAAA
Trigger: CGCTGCGGCTGCACGAGCGCACACACACGGGAGACC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACGGTTGGCGAAGGTCTaGCCGCAGGTGTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGRLAKV*PQVSQR
Trigger: CCGCTGCGACACCTGCGGCCAGACCTTCGCCAACCG...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATGGAGGGCGTTGAGCTaGGTGAACTGCTTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPWRALS*VNCLPH
Trigger: GTGCGGCAAGCAGTTCACCCAGCTCAACGCCCTCCA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATGCACCTGCAGCACGTaGCGCTTCACGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPCTCST*RFTSFL
Trigger: CAAGAAGGACGTGAAGCGGCACGTGCTGCAGGTGCA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTCAGGTTGCAGCGGTTaGCGAAGGTCTGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGSGCSG*RRSGRR
Trigger: CCTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTACGGCTGCGAGAACCTaGCGCCGCACTCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMATAART*RRTRCS
Trigger: GCTGCACCGAGTGCGGCGCCAGGTTCTCGCAGCCGT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTTCTCATGTGCGTCTTaGGCGCGGACGGCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGFSCAS*ARTAAR
Trigger: TCTCGCAGCCGTCCGCGCTCAAGACGCACATGAGAA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACTAAATGGCCCTTCTTaGGGCTCTGGGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPLNGPS*GSGRGT
Trigger: AGTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTTAG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCGCCGTGGCGGTGCTTaGTGTGCTTCAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGRRGGA*CASGSS
Trigger: AGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTGGAACTCAGGCCCTTaGCGCACTGGCCGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAWNSGP*RTGRSG
Trigger: ACCGCTGCGGCCAGTGCGGCAAGGGCCTGAGTTCCA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGCACGTGGCGCTGGTaGCTCTTCAGGTTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGCTWRW*LFRLQR
Trigger: CCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTGCCGCAGCGCTGTCTTaGAACTCAGGCCCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAAAALS*NSGPCR
Trigger: GCGGCAAGGGCCTGAGTTCCAAGACAGCGCTGCGGC...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACGGCCCTGCTTTCTTTaGCAATTCCTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPRPCFL*QFLQLS
Trigger: GCTGAGTTGGAGGAATTGTCAAAGAAAGCAGGGCCG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGAGTGGACTTGTCGGTaGATGTCCGTCCGCACGCAT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGEWTCR*MSVRTH
Trigger: ATGCGTGCGGACGGACATTCACCGACAAGTCCACTC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAAGCCCCACATCATCTTaGGTTCAGCTACCACACACG +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPSPTSS*VQLPHT
Trigger: CGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCT...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACCCTCAGCAGTTTTCTaGTGCTCTCGGAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPPSAVF*CSRSLL
Trigger: GAGAAGACTCCGAGAGCAGCAGAAAACTGCTGAGGG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTGTGTGTGTGCGCTCGTaGAGCCGCAGCGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAVCVRS*SRSAVL
Trigger: CAAGACAGCGCTGCGGCTGCACGAGCGCACACACAC...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTTGAGCGCGGACGGCTaGGAGAACCTGGCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASLSADG*ENLAPH
Trigger: GTGCGGCGCCAGGTTCTCGCAGCCGTCCGCGCTCAA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGCCGCAGCGCTGTCTTaGAACTCAGGCCCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRAAALS*NSGPCR
Trigger: GCGGCAAGGGCCTGAGTTCCAAGACAGCGCTGCGGC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTGTCACGTCACACAGGTaGCCCAGGAGGCGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAVTSHR*PRRRSS
Trigger: TGAGCTTCGCCTCCTGGGTCACCTGTGTGACGTGAC...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGGTGGCTCTTCAGGTTaGAGCGGTTGGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGGGSSG*SGWRRS
Trigger: AGACCTTCGCCAACCGCTGCAACCTGAAGAGCCACC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGGAAATGGCGCTCGCTaGTGTGCACGTGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRGNGAR*CARGAG
Trigger: ACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACTGGGAGAGGCACTGTaGCGGCACCTGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRLGEAL*RHLATF
Trigger: GAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMALCTWR*WLFRLQ
Trigger: CTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAG...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRSLLCT*RWWLFR
Trigger: CCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGA...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCTGATACTCCACGCTaGCTGTCACGTCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGPDTPR*LSRHTG
Trigger: ACCTGTGTGACGTGACAGTCAGCGTGGAGTATCAGG...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAAGTAAATTAGTACTGTaGCCTCCAAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPSKLVL*PPRAGV
Trigger: CACACCTGCCCTTGGAGGTCACAGTACTAATTTACT...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGGTGGCAGCCAGCACTaGCTTGTGGGCCATGAAGTC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRGGSQH*LVGHEV
Trigger: GACTTCATGGCCCACAAGGCAGTGCTGGCTGCCACC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCACTCAGCATGGCTGTaGTTGGACTTGGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGHSAWL*LDLEEW
Trigger: CCATTCCTCCAAGTCCAAGCACAGCCATGCTGAGTG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAGTGTGGATGCGGCGGTaGCGCTGGAGGGCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREVWMRR*RWRALS
Trigger: GCTCAACGCCCTCCAGCGCCACCGCCGCATCCACAC...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGTAGGTACAGTGTCTTaGACTGCAGCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGVGTVS*TAARLW
Trigger: CCACAACCTGGCTGCAGTCCAAGACACTGTACCTAC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACATCGAGTCTGTCTGTaGGGTCAGCTCGCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGHRVCL*GQLAKL
Trigger: GAGCTTAGCGAGCTGACCCCACAGACAGACTCGATG...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 72 bp CTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTaGGGACCAATCCACTCAGATGGTGGCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCRHLATFLITH*GPIHSDGGLAS
Trigger: GGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCTCACCTCCACCTCCTaGGACTCTGAGAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGLTSTS*DSEKFC
Trigger: GCAAAATTTCTCAGAGTCTCAGGAGGTGGAGGTGAG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTTCTCATGTGCGTCTTaGGCGCGGACGGCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASFSCAS*ARTAAR
Trigger: TCTCGCAGCCGTCCGCGCTCAAGACGCACATGAGAA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGAGTGGACTTGTCGGTaGATGTCCGTCCGCACGCAT +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLREWTCR*MSVRTH
Trigger: ATGCGTGCGGACGGACATTCACCGACAAGTCCACTC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCGCCGTGGCGGTGCTTaGTGTGCTTCAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASRRGGA*CASGSS
Trigger: AGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACCGCCCTCATGCACCTaGAGCACGTGCCGCTTCACG +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREPPSCT*STCRFT
Trigger: CGTGAAGCGGCACGTGCTGCAGGTGCATGAGGGCGG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTCGGAGTCATCTGCCTTaGAGGCTGTGTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMARSHLP*RLCQQN
Trigger: GTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCG...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACACCACGGAGTCATCTaGCTTGCAGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRHHGVI*LAGCVS
Trigger: GCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGGCAACCCTCATTTTTaGAAACCTGCTCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGGNPHF*KPAPSP
Trigger: CGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGGACGCTCCCCTGTGTaGACTTTAATATGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGGRSPV*TLICWY
Trigger: GTACCAGCATATTAAAGTCCACACAGGGGAGCGTCC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAATGCGGCGGTGGCGCTaGAGGGCGTTGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSMRRWR*RALSWV
Trigger: CACCCAGCTCAACGCCCTCCAGCGCCACCGCCGCAT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGTGAGACCACTGGGGTaGGGGCCATCGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCVRPLG*GPSVAT
Trigger: TGTGGCCACCGATGGCCCTCACCCCAGTGGTCTCAC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCGCACGCATTGCACATaGATGGCCTCTCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASRTHCT*MASPLC
Trigger: ACACAGGGGAGAGGCCATTCATGTGCAATGCGTGCG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTAGCCCCACATCATCTTaGGTTCAGCTACCACACACG +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMASPTSS*VQLPHT
Trigger: CGTGTGTGGTAGCTGAACTCAAGATGATGTGGGGCT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGGTTGTGGCCTGCGCATaGGCAGAGGCCAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASVVACA*AEARIS
Trigger: AGAAATCCTGGCCTCTGCTCATGCGCAGGCCACAAC...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATGGAACTCAGGCCCTTaGCGCACTGGCCGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSWNSGP*RTGRSG
Trigger: ACCGCTGCGGCCAGTGCGGCAAGGGCCTGAGTTCCA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTGGTCTCCCGTGTGTGTaGGCTCGTGCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVGLPCV*ARAAAA
Trigger: CGCTGCGGCTGCACGAGCGCACACACACGGGAGACC...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTACAGTGTCTTGGACTaGAGCCAGGTTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGYSVLD*SQVVEM
Trigger: CATTTCCACAACCTGGCTGCAGTCCAAGACACTGTA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGCAGAACTGTTCTCCTaGATGGTAGGTACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGAELFS*MVGTVS
Trigger: AGACACTGTACCTACCATGCAGGAGAACAGTTCTGC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATACAGTGAATTCCGCTaGGCAAAAGTCCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPYSEFR*AKVLKH
Trigger: ATGTTTCAGGACTTTTGCCCAGCGGAATTCACTGTA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGGACGCTCCCCTGTGTaGACTTTAATATGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGGRSPV*TLICWY
Trigger: GTACCAGCATATTAAAGTCCACACAGGGGAGCGTCC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTGTAGGTACAGTGTCTTaGACTGCAGCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAVGTVS*TAARLW
Trigger: CCACAACCTGGCTGCAGTCCAAGACACTGTACCTAC...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACATCGAGTCTGTCTGTaGGGTCAGCTCGCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRHRVCL*GQLAKL
Trigger: GAGCTTAGCGAGCTGACCCCACAGACAGACTCGATG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACCCTTCTTGAGGCTCTaGGAGAGGCACTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREPFLRL*ERHCAG
Trigger: GCCGGCACAGTGCCTCTCCCAGAGCCTCAAGAAGGG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAGTCCAAGGAATCCGTaGGACCACTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRESPRNP*DHWGEG
Trigger: GCCCTCACCCCAGTGGTCTCACGGATTCCTTGGACT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGAATATGCTGGTACAGTaGATTCCGCTGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGNMLVQ*IPLGKS
Trigger: ACTTTTGCCCAGCGGAATTCACTGTACCAGCATATT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGAGCTCATGCATCTCATaGAGTAGGTTAAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGSSCIS*SRLNGE
Trigger: CTCCCCATTTAACCTACTGCATGAGATGCATGAGCT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGCAAATCTGAAGACATaGCATTGCTGGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGANLKT*HCWLSL
Trigger: GAGAGAGAGCCAGCAATGGCATGTCTTCAGATTTGC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATCAGCAGTTTTCTGCTaGTCTCGGAGTCTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGSAVFC*SRSLLV
Trigger: TACGAGAAGACTCCGAGAGCAGCAGAAAACTGCTGA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTCTCCAACTCAGCACCTaGCTGGCAACCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMALQLST*LATLIF
Trigger: AAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAG...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGCCACGCCGTGGCGGTaGTTGCTGTGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCATPWR*LLCFRK
Trigger: CTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTAAGACATGCCATTGCTaGCTCTCTCTCCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAKTCHC*LSLLGS
Trigger: ACTACCCAGGAGAGAGAGCCAGCAATGGCATGTCTT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGGTACACCACCTCGGTaGCCACGCCGTGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSGTPPR*PRRGGA
Trigger: AGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGACGGCTGCGAGAACCTaGCGCCGCACTCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLTAART*RRTRCS
Trigger: GCTGCACCGAGTGCGGCGCCAGGTTCTCGCAGCCGT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAATGGAGGGCGTTGAGCTaGGTGAACTGCTTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREWRALS*VNCLPH
Trigger: GTGCGGCAAGCAGTTCACCCAGCTCAACGCCCTCCA...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGTGTGGATGCGGCGGTaGCGCTGGAGGGCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSVWMRR*RWRALS
Trigger: GCTCAACGCCCTCCAGCGCCACCGCCGCATCCACAC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTAAACAGTACATCAGCTaGGCAGGTTCGGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAKQYIS*AGSVSS
Trigger: AGAGGAGACCGAACCTGCCCAGCTGATGTACTGTTT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTAGTCCAAGGAATCCGTaGGACCACTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCSPRNP*DHWGEG
Trigger: GCCCTCACCCCAGTGGTCTCACGGATTCCTTGGACT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGCATGTGGTTCTGAGTaGATCTTGCACCACATTCAT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGACGSE*ILHHIH
Trigger: ATGAATGTGGTGCAAGATTCACTCAGAACCACATGC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGCCTACTTTTTACATTaGAGAAAGTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGAYFLH*RKWQRA
Trigger: AGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGGTTGGAAAATGGTTaGAGCAAGCTCCTAAATGGC +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGWLENG*SKLLNG
Trigger: GCCATTTAGGAGCTTGCTTCAACCATTTTCCAACCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTATCGGTGGCCACACTTaGCCTGGGGGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIIGGHT*PGGRSS
Trigger: GCTGCTCCTGCCCCCAGGGCAAGTGTGGCCACCGAT...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATCATTTTTGGAAACCTaGTCCATCTCCGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRSFLET*SISVPT
Trigger: GGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGA...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTGCCACGCCGTGGCGGTaGTTGCTGTGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVATPWR*LLCFRK
Trigger: CTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGC...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTCGTGTATTGAGGTGTaGCGCCGAAGAGTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASSCIEV*RRRVDL
Trigger: CAAGTCCACTCTTCGGCGGCACACCTCAATACACGA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTACAGTGTCTTGGACTaGAGCCAGGTTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAYSVLD*SQVVEM
Trigger: CATTTCCACAACCTGGCTGCAGTCCAAGACACTGTA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGCTGTGATAAAGCCGTaGAAGTTAGCAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGAVIKP*KLAEVQ
Trigger: CTGAACTTCTGCTAACTTGCACGGCTTTATCACAGC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACTGTGTTCTATAATTTaGCACAGTCACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPLCSII*HSHLIL
Trigger: CAAAATGAGGTGACTGTGGCAAATTATAGAACACAG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGACATGTCAGTTACTTaGCTGTTTCCATCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGDMSVT*LFPSLG
Trigger: ACCTAGAGATGGAAACAGGCAAGTAACTGACATGTC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCAGCAATAATTAAGTCCTaGATGAAACAGCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPAIIKS*MKQPKK
Trigger: CTTCTTTGGCTGTTTCATGCAGGACTTAATTATTGC...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTCGGTGGCCACGCCGTaGCGGTGCTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSSVATP*RCLLCF
Trigger: GAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTCGGTGGCCACGCCGTaGCGGTGCTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSVATP*RCLLCF
Trigger: GAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVSLLCT*RWWLFR
Trigger: CCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAAGCTCGCATGGGAAATaGCGCTCGCTGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSSSHGK*RSLLCT
Trigger: CGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTGGACTTTAATATGCTaGTACAGTGAATTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGWTLIC*YSEFRW
Trigger: CCAGCGGAATTCACTGTACCAGCATATTAAAGTCCA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATATGCGGCGGTGGCGCTaGAGGGCGTTGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNMRRWR*RALSWV
Trigger: CACCCAGCTCAACGCCCTCCAGCGCCACCGCCGCAT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTACTGCAGCCAGGTTGTaGAAATGGCCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMATAARL*KWPFSA
Trigger: TGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATTGGGACAAAGTTACTaGTTCTTCACAATCAACTCT +
Preference number: 4 (lower is better)
Translates to: ESSTALPARLWPAHEQRPLGQSY*FFTINS
Trigger: AGAGTTGATTGTGAAGAACCAGTAACTTTGTCCCAA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTCTGCCTTGTGGGCCATaGAGTCTTTGCGGACACCCT +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCLPCGP*SLCGHP
Trigger: AGGGTGTCCGCAAAGACTTCATGGCCCACAAGGCAG...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACGTCCTTCTTGCGCTTaGACTTCTTCCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRERPSCA*TSSRTA
Trigger: AGCTGTGCGGGAAGAAGTTCAAGCGCAAGAAGGACG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCACGCACGCATTGCACATaGATGGCCTCTCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSRTHCT*MASPLC
Trigger: ACACAGGGGAGAGGCCATTCATGTGCAATGCGTGCG...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAATCCGAAAGCTTGGATaGCACATACTCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRIRKLG*HILFVR
Trigger: CCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGAT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTATCGGTGGCCACACTTaGCCTGGGGGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCIGGHT*PGGRSS
Trigger: GCTGCTCCTGCCCCCAGGGCAAGTGTGGCCACCGAT...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATCCGCCCTCATGCACCTaGAGCACGTGCCGCTTCACG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNPPSCT*STCRFT
Trigger: CGTGAAGCGGCACGTGCTGCAGGTGCATGAGGGCGG...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGGTGTGTGTGCGCTCGTaGAGCCGCAGCGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLVCVRS*SRSAVL
Trigger: CAAGACAGCGCTGCGGCTGCACGAGCGCACACACAC...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGTCTAGTTTGTCCTTaGACTTCTTCGGTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGCLVCP*TSSVAN
Trigger: ATTTGCCACCGAAGAAGTCCAAGGACAAACTAGACA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAAACTCAGCACCTGCCTaGCAACCCTCATTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRNSAPA*QPSFLE
Trigger: TTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTCAGGTTGCAGCGGTTaGCGAAGGTCTGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSGCSG*RRSGRR
Trigger: CCTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTCTTCCAGCCCGGTTGTaGCCTGCGCATGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSILPARL*PAHEQR
Trigger: CCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAG...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCCCCTTCTTGAGGCTCTaGGAGAGGCACTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSPFLRL*ERHCAG
Trigger: GCCGGCACAGTGCCTCTCCCAGAGCCTCAAGAAGGG...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGAAGCAAGCTCCTAAATaGCCCTTCTTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASKQAPK*PFLRLW
Trigger: CCAGAGCCTCAAGAAGGGCCATTTAGGAGCTTGCTT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTCCTGATACTCCACGCTaGCTGTCACGTCACACAGGT +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCPDTPR*LSRHTG
Trigger: ACCTGTGTGACGTGACAGTCAGCGTGGAGTATCAGG...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAAGGATGGGAACTGCTTaGAGCTCTTATTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRRMGTA*SSYSML
Trigger: CAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACAGGGAAGAAATGACTaGAAATATGTGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRQGRND*KYVAPV
Trigger: AACTGGGGCCACATATTTTCAGTCATTTCTTCCCTG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGAGTAAATTAGTACTGTaGCCTCCAAGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASSKLVL*PPRAGV
Trigger: CACACCTGCCCTTGGAGGTCACAGTACTAATTTACT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTGTTGTGGCCTGCGCATaGGCAGAGGCCAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVVVACA*AEARIS
Trigger: AGAAATCCTGGCCTCTGCTCATGCGCAGGCCACAAC...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTTGGAAAATGGTTaGAGCAAGCTCCTAAATGGC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRWLENG*SKLLNG
Trigger: GCCATTTAGGAGCTTGCTTCAACCATTTTCCAACCA...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGGCAAATCTGAAGACATaGCATTGCTGGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASANLKT*HCWLSL
Trigger: GAGAGAGAGCCAGCAATGGCATGTCTTCAGATTTGC...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTCAGCAGTTTTCTGCTaGTCTCGGAGTCTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASSAVFC*SRSLLV
Trigger: TACGAGAAGACTCCGAGAGCAGCAGAAAACTGCTGA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATCCTGCTCCATCTCCGTaGCCACCCTGTCCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNPAPSP*PPCPGF
Trigger: AAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGG...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAATGGCGGTGCTTGCTGTaGTTCAGGAAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREWRCLL*FRKLFS
Trigger: TGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCA...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTGGAAATGGCGCTCGCTaGTGTGCACGTGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCGNGAR*CARGAG
Trigger: ACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCC...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTGCACCTGCAGCACGTaGCGCTTCACGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVCTCST*RFTSFL
Trigger: CAAGAAGGACGTGAAGCGGCACGTGCTGCAGGTGCA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTTTGAGCTGGGTGAACTaGTTGCCGCACTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCLSWVN*LPHWSQ
Trigger: CTGTGACCAGTGCGGCAAGCAGTTCACCCAGCTCAA...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAATCGTGTATTGAGGTGTaGCGCCGAAGAGTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRESCIEV*RRRVDL
Trigger: CAAGTCCACTCTTCGGCGGCACACCTCAATACACGA...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGGCAGAACTGTTCTCCTaGATGGTAGGTACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASAELFS*MVGTVS
Trigger: AGACACTGTACCTACCATGCAGGAGAACAGTTCTGC...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGCTATGTTCTCACATaGTCCCAAGGAAATAGACAT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGCYVLT*SQGNRH
Trigger: ATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAACTTTTGGTCCCTACTaGTATGTTCTCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRTFGPY*YVLTCS
Trigger: GGAGCATGTGAGAACATAGCAGTAGGGACCAAAAGT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTGGAGCAGCACTAACTTaGGAGCCACTGCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVGAALT*EPLLTS
Trigger: GGAGGTGAGCAGTGGCTCCCAAGTTAGTGCTGCTCC...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATTGCACGTGGCGCTGGTaGCTCTTCAGGTTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNCTWRW*LFRLQR
Trigger: CCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCA...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLLCTWR*WLFRLQ
Trigger: CTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAG...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCGCAGACTAACAGGATaGGAACTGCTTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASRRLTG*ELLEAL
Trigger: AAGAGCTTCAAGCAGTTCCCATCCTGTTAGTCTGCG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAAGCCAAAGAAGCATTTaGGACAAAGTTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGSQRSI*DKVTGS
Trigger: AGAACCAGTAACTTTGTCCCAAATGCTTCTTTGGCT...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAATCCACTCAGATGGTaGCCTCGCTTCCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRENPLRW*PRFHSA
Trigger: TGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCATCCCTTTGGAGTTTaGGCTGACAGCATTTCACAG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASHPFGV*ADSISQ
Trigger: CTGTGAAATGCTGTCAGCCCAAACTCCAAAGGGATG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGAGGATGGGAACTGCTTaGAGCTCTTATTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASRMGTA*SSYSML
Trigger: CAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTACACCAGAATTAAGTaGGGTTATGTTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAYTRIK*GYVHCL
Trigger: AAGGCAGTGAACATAACCTCACTTAATTCTGGTGTA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGAAATATAAGGCAGAGTaGGAAGCCAGGAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASKYKAE*EARKTA
Trigger: AGCAGTCTTCCTGGCTTCTCACTCTGCCTTATATTT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCAGGGAAGAAATGACTaGAAATATGTGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASQGRND*KYVAPV
Trigger: AACTGGGGCCACATATTTTCAGTCATTTCTTCCCTG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGACTCTGAGAAATTTTaGAACTCCAAAAGTACTGAC +
Preference number: 4 (lower is better)
Translates to: LGEALCRHLATFLITHLGDSEKF*NSKSTD
Trigger: GTCAGTACTTTTGGAGTTGCAAAATTTCTCAGAGTC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCGGTGGCTCTTCAGGTTaGAGCGGTTGGCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAGGSSG*SGWRRS
Trigger: AGACCTTCGCCAACCGCTGCAACCTGAAGAGCCACC...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGTGTGGACTTTAATATaGTGGTACAGTGAATTCCGC +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRVWTLI*WYSEFR
Trigger: GCGGAATTCACTGTACCAGCATATTAAAGTCCACAC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGCACCACGGAGTCATCTaGCTTGCAGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLHHGVI*LAGCVS
Trigger: GCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTG...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGCTCTTATTCCATGTTaGTCAAAGAGTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRALIPC*SKSEAV
Trigger: CACAGCTTCACTCTTTGAGCAACATGGAATAAGAGC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGGACAAACTTCCTAGCTaGGTATGTGCTGAGATTACG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASDKLPS*VCAEIT
Trigger: CGTAATCTCAGCACATACGCAGCTAGGAAGTTTGTC...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACTGGGAGAGGCACTGTaGCGGCACCTGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTLGEAL*RHLATF
Trigger: GAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCGCCAGCACTGCCTTGTaGGCCATGAAGTCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAASTAL*AMKSLR
Trigger: CCGCAAAGACTTCATGGCCCACAAGGCAGTGCTGGC...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAGGCAACCCTCATTTTTaGAAACCTGCTCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREGNPHF*KPAPSP
Trigger: CGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCC...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATAGCTCGCATGGGAAATaGCGCTCGCTGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNSSHGK*RSLLCT
Trigger: CGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACTTCCAGCCCGGTTGTaGCCTGCGCATGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTLPARL*PAHEQR
Trigger: CCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTCTTCGGTGGCAAATCTaGAGACATGCCATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVLRWQI*RHAIAG
Trigger: GCCAGCAATGGCATGTCTTCAGATTTGCCACCGAAG...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCCGTCCTTCTTGCGCTTaGACTTCTTCCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLARPSCA*TSSRTA
Trigger: AGCTGTGCGGGAAGAAGTTCAAGCGCAAGAAGGACG...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGGCCTACTTTTTACATTaGAGAAAGTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASAYFLH*RKWQRA
Trigger: AGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGC...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAGGAGGCGAAGCTCATaGATCTCATGCAGTAGGTTA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRERRRSS*ISCSRL
Trigger: TAACCTACTGCATGAGATGCATGAGCTTCGCCTCCT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTTCCACCTGTACCTTTaGAGTGTAGACAAACTCAAG +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASFHLYL*SVDKLK
Trigger: CTTGAGTTTGTCTACACTGCAAAGGTACAGGTGGAA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTTTGAGCTGGGTGAACTaGTTGCCGCACTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSILSWVN*LPHWSQ
Trigger: CTGTGACCAGTGCGGCAAGCAGTTCACCCAGCTCAA...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCCGGAGTCATCTGCCTTaGAGGCTGTGTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSRSHLP*RLCQQN
Trigger: GTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCG...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATGCAGAGGCCATTCTTaGCCACATCTTTGCACATGG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSCRGHS*PHLCTW
Trigger: CCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGCTATGTTCTCACATaGTCCCAAGGAAATAGACAT +
Preference number: 4 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRCYVLT*SQGNRH
Trigger: ATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCA...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAACTCAGCACCTGCCTaGCAACCCTCATTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRENSAPA*QPSFLE
Trigger: TTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTGGTTTGGATCCAGTATaGATTCTATTGTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAGLDPV*ILLWCF
Trigger: AAAACACCACAATAGAATCCATACTGGATCCAAACC...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTATTTATCCGAAAGCTTaGATGACACATACTCTTCGT +
Preference number: 4 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAIYPKA*MTHTLR
Trigger: ACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAAT...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAAAGAGTGAAGCTGTGTaGGCATCGAGTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSKSEAV*ASSLSV
Trigger: CACAGACAGACTCGATGCCCACACAGCTTCACTCTT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAAAACAGTACATCAGCTaGGCAGGTTCGGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSKQYIS*AGSVSS
Trigger: AGAGGAGACCGAACCTGCCCAGCTGATGTACTGTTT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGGCTGTGCTTGGACTTaGAGGAATGGGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSGCAWT*RNGADA
Trigger: AGCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACACCTCCTGAGACTCTaGGAAATTTTGCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREHLLRL*EILQLQ
Trigger: TTGGAGTTGCAAAATTTCTCAGAGTCTCAGGAGGTG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCCTTCGGTGGCAAATCTaGAGACATGCCATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLALRWQI*RHAIAG
Trigger: GCCAGCAATGGCATGTCTTCAGATTTGCCACCGAAG...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAGCGAGCCATCTACAATaGCAAGGAAAGACTTCCATG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSASHLQ*QGKTSM
Trigger: CATGGAAGTCTTTCCTTGTCATTGTAGATGGCTCGC...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGCGAGCCATCTACAATaGCAAGGAAAGACTTCCATG +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCASHLQ*QGKTSM
Trigger: CATGGAAGTCTTTCCTTGTCATTGTAGATGGCTCGC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCACTTCCAGCATTCGCTaGACCCGATCTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSTSSIR*TRSSST
Trigger: GGTGGAAGAAGATCGGGTGCAGCGAATGCTGGAAGT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCACTTCCAGCATTCGCTaGACCCGATCTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLATSSIR*TRSSST
Trigger: GGTGGAAGAAGATCGGGTGCAGCGAATGCTGGAAGT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCTGGCGGTGCTTGCTGTaGTTCAGGAAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAWRCLL*FRKLFS
Trigger: TGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCA...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAAGTTCAGGAAAATCTaGAGAGGCCATTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREKFRKI*RGHSCP
Trigger: TGGGCAAGAATGGCCTCTGCAGATTTTCCTGAACTT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATTCTCCAGGATCCCACTaGCAGAGACCAACTGGGATC +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNSPGSH*QRPTGI
Trigger: GATCCCAGTTGGTCTCTGGCAGTGGGATCCTGGAGA...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAGGAGCAGCACTAACTTaGGAGCCACTGCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTGAALT*EPLLTS
Trigger: GGAGGTGAGCAGTGGCTCCCAAGTTAGTGCTGCTCC...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAACTGCAGCCAGGTTGTaGAAATGGCCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSTAARL*KWPFSA
Trigger: TGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATGGCTGTGCTTGGACTTaGAGGAATGGGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNGCAWT*RNGADA
Trigger: AGCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCC...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTCATCCCTTTGGAGTTTaGGCTGACAGCATTTCACAG +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCHPFGV*ADSISQ
Trigger: CTGTGAAATGCTGTCAGCCCAAACTCCAAAGGGATG...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGCATGTGGTTCTGAGTaGATCTTGCACCACATTCAT +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCACGSE*ILHHIH
Trigger: ATGAATGTGGTGCAAGATTCACTCAGAACCACATGC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCATGTTGCTCAAAGAGTaGAGCTGTGTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSMLLKE*SCVGIE
Trigger: CTCGATGCCCACACAGCTTCACTCTTTGAGCAACAT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACTAAATGGCCCTTCTTaGGGCTCTGGGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTLNGPS*GSGRGT
Trigger: AGTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTTAG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATCCCTCAGCAGTTTTCTaGTGCTCTCGGAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNPSAVF*CSRSLL
Trigger: GAGAAGACTCCGAGAGCAGCAGAAAACTGCTGAGGG...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTCATTTTTGGAAACCTaGTCCATCTCCGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSFLET*SISVPT
Trigger: GGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTAAGTTCAGGAAAATCTaGAGAGGCCATTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCKFRKI*RGHSCP
Trigger: TGGGCAAGAATGGCCTCTGCAGATTTTCCTGAACTT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGGTAAAACGAAAGGCTaGACATCCCTTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCGKTKG*TSLWSL
Trigger: CAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGAAGACATGCCATTGCTaGCTCTCTCTCCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLKTCHC*LSLLGS
Trigger: ACTACCCAGGAGAGAGAGCCAGCAATGGCATGTCTT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCAAGAGTGAAGCTGTGTaGGCATCGAGTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAKSEAV*ASSLSV
Trigger: CACAGACAGACTCGATGCCCACACAGCTTCACTCTT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATCCTCATTACACACTTaGGACCAATCCACTCAGATG +
Preference number: 4 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSSSLHT*DQSTQM
Trigger: CATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGAAGCAAGCTCCTAAATaGCCCTTCTTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLKQAPK*PFLRLW
Trigger: CCAGAGCCTCAAGAAGGGCCATTTAGGAGCTTGCTT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTCTCACCTCCACCTCCTaGGACTCTGAGAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCLTSTS*DSEKFC
Trigger: GCAAAATTTCTCAGAGTCTCAGGAGGTGGAGGTGAG...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACGGCCCTGCTTTCTTTaGCAATTCCTCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTRPCFL*QFLQLS
Trigger: GCTGAGTTGGAGGAATTGTCAAAGAAAGCAGGGCCG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGATCCGAAAGCTTGGATaGCACATACTCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLIRKLG*HILFVR
Trigger: CCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGAT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTAGGAGGCGAAGCTCATaGATCTCATGCAGTAGGTTA +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIRRRSS*ISCSRL
Trigger: TAACCTACTGCATGAGATGCATGAGCTTCGCCTCCT...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTCTCCAACTCAGCACCTaGCTGGCAACCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCLQLST*LATLIF
Trigger: AAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAG...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTTGCAGAGGCCATTCTTaGCCACATCTTTGCACATGG +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCCRGHS*PHLCTW
Trigger: CCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCA...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACACTCAGCATGGCTGTaGTTGGACTTGGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTHSAWL*LDLEEW
Trigger: CCATTCCTCCAAGTCCAAGCACAGCCATGCTGAGTG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTTACAGTGAATTCCGCTaGGCAAAAGTCCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCYSEFR*AKVLKH
Trigger: ATGTTTCAGGACTTTTGCCCAGCGGAATTCACTGTA...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCCGCAGACTAACAGGATaGGAACTGCTTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSRRLTG*ELLEAL
Trigger: AAGAGCTTCAAGCAGTTCCCATCCTGTTAGTCTGCG...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTTTACTGCCTACAAATaGGGGGTGGGGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLFTAYK*GVGRNE
Trigger: TTCATTCCTCCCCACCCCCCATTTGTAGGCAGTAAA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTCATTTCACAAGCACGTaGCACATACTCAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIHFTST*HILKAL
Trigger: TAGGGCCTTGAGTATGTGCCACGTGCTTGTGAAATG...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGAAAATGGTTGGAAAATaGTTGAAGCAAGCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASKMVGK*LKQAPK
Trigger: TTTAGGAGCTTGCTTCAACCATTTTCCAACCATTTT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCCACCTCCTGAGACTCTaGGAAATTTTGCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAHLLRL*EILQLQ
Trigger: TTGGAGTTGCAAAATTTCTCAGAGTCTCAGGAGGTG...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGATCAGCATGTGGTTCTaGGTGAATCTTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLISMWF*VNLAPH
Trigger: ATGTGGTGCAAGATTCACTCAGAACCACATGCTGAT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAATGTTGCTCAAAGAGTaGAGCTGTGTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTMLLKE*SCVGIE
Trigger: CTCGATGCCCACACAGCTTCACTCTTTGAGCAACAT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCAAATATAAGGCAGAGTaGGAAGCCAGGAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSKYKAE*EARKTA
Trigger: AGCAGTCTTCCTGGCTTCTCACTCTGCCTTATATTT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGCTGTGATAAAGCCGTaGAAGTTAGCAGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSAVIKP*KLAEVQ
Trigger: CTGAACTTCTGCTAACTTGCACGGCTTTATCACAGC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCACTTTTGGTCCCTACTaGTATGTTCTCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSTFGPY*YVLTCS
Trigger: GGAGCATGTGAGAACATAGCAGTAGGGACCAAAAGT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTGGACTTTAATATGCTaGTACAGTGAATTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVWTLIC*YSEFRW
Trigger: CCAGCGGAATTCACTGTACCAGCATATTAAAGTCCA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATTTTACTGCCTACAAATaGGGGGTGGGGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNFTAYK*GVGRNE
Trigger: TTCATTCCTCCCCACCCCCCATTTGTAGGCAGTAAA...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATCATTTCACAAGCACGTaGCACATACTCAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNHFTST*HILKAL
Trigger: TAGGGCCTTGAGTATGTGCCACGTGCTTGTGAAATG...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTCCTCATTACACACTTaGGACCAATCCACTCAGATG +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSSSLHT*DQSTQM
Trigger: CATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATAGCTCATGCATCTCATaGAGTAGGTTAAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNSSCIS*SRLNGE
Trigger: CTCCCCATTTAACCTACTGCATGAGATGCATGAGCT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTGACTCTGAGAAATTTTaGAACTCCAAAAGTACTGAC +
Preference number: 4 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCDSEKF*NSKSTD
Trigger: GTCAGTACTTTTGGAGTTGCAAAATTTCTCAGAGTC...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTGCTCTTATTCCATGTTaGTCAAAGAGTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIALIPC*SKSEAV
Trigger: CACAGCTTCACTCTTTGAGCAACATGGAATAAGAGC...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAATCTTGCCCACATCTTTaGACATGGACAATTATTTTT +
Preference number: 4 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRESCPHL*TWTIIF
Trigger: AAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGA...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCAGGTTCGGTCTCCTCTaGATGTATGACAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLARFGLL*MYDSHY
Trigger: ATAATGACTGTCATACATCCAGAGGAGACCGAACCT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTAGGTTCGGTCTCCTCTaGATGTATGACAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIRFGLL*MYDSHY
Trigger: ATAATGACTGTCATACATCCAGAGGAGACCGAACCT...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 72 bp CCTAGCTGCGTATGTGCTGAGATTACGCTAGCAGTTTaGCAGGTGTTCAATCTGTCAGTCATACTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PSCVCAEITLAV*QVFNLSVILCL
Trigger: TAAACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGCACATACGCAGCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAATCAGCATGTGGTTCTaGGTGAATCTTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTISMWF*VNLAPH
Trigger: ATGTGGTGCAAGATTCACTCAGAACCACATGCTGAT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAAATATGCTGGTACAGTaGATTCCGCTGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTNMLVQ*IPLGKS
Trigger: ACTTTTGCCCAGCGGAATTCACTGTACCAGCATATT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCAATCCTAGGACTGTATaGAATAAAGGCTTATGGACC +
Preference number: 4 (lower is better)
Translates to: AEAILAHIFAHGQLFFLANPRTV*NKGLWT
Trigger: GGTCCATAAGCCTTTATTTCATACAGTCCTAGGATT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTAATCCTAGGACTGTATaGAATAAAGGCTTATGGACC +
Preference number: 4 (lower is better)
Translates to: NLVKRKAAHPFGVWADSINPRTV*NKGLWT
Trigger: GGTCCATAAGCCTTTATTTCATACAGTCCTAGGATT...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATGTGTGGACTTTAATATaGTGGTACAGTGAATTCCGC +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNVWTLI*WYSEFR
Trigger: GCGGAATTCACTGTACCAGCATATTAAAGTCCACAC...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAGACAAACTTCCTAGCTaGGTATGTGCTGAGATTACG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTDKLPS*VCAEIT
Trigger: CGTAATCTCAGCACATACGCAGCTAGGAAGTTTGTC...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTGACATGTCAGTTACTTaGCTGTTTCCATCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCDMSVT*LFPSLG
Trigger: ACCTAGAGATGGAAACAGGCAAGTAACTGACATGTC...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAGGTAAAACGAAAGGCTaGACATCCCTTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTGKTKG*TSLWSL
Trigger: CAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACC...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTGGTTTGGATCCAGTATaGATTCTATTGTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVGLDPV*ILLWCF
Trigger: AAAACACCACAATAGAATCCATACTGGATCCAAACC...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTTGGGACAAAGTTACTaGTTCTTCACAATCAACTCT +
Preference number: 4 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVLGQSY*FFTINS
Trigger: AGAGTTGATTGTGAAGAACCAGTAACTTTGTCCCAA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTCCCTCATTAATTTCTaGCATAGTGCAGCTACATGT +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSLINF*HSAATC
Trigger: ACATGTAGCTGCACTATGCCAGAAATTAATGAGGGA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACATTCCACCTGTACCTTTaGAGTGTAGACAAACTCAAG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTFHLYL*SVDKLK
Trigger: CTTGAGTTTGTCTACACTGCAAAGGTACAGGTGGAA...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACATGTCTAGTTTGTCCTTaGACTTCTTCGGTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTCLVCP*TSSVAN
Trigger: ATTTGCCACCGAAGAAGTCCAAGGACAAACTAGACA...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCATTTATCCGAAAGCTTaGATGACACATACTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LMPTFYIEESGRELNRTSIYPKA*MTHTLR
Trigger: ACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAAT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATTCCCTCATTAATTTCTaGCATAGTGCAGCTACATGT +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNSLINF*HSAATC
Trigger: ACATGTAGCTGCACTATGCCAGAAATTAATGAGGGA...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR TCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACATACACCAGAATTAAGTaGGGTTATGTTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTYTRIK*GYVHCL
Trigger: AAGGCAGTGAACATAACCTCACTTAATTCTGGTGTA...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTCTTGCCCACATCTTTaGACATGGACAATTATTTTT +
Preference number: 4 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLSCPHL*TWTIIF
Trigger: AAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATGCAATAATTAAGTCCTaGATGAAACAGCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNAIIKS*MKQPKK
Trigger: CTTCTTTGGCTGTTTCATGCAGGACTTAATTATTGC...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAAGCCAAAGAAGCATTTaGGACAAAGTTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTSQRSI*DKVTGS
Trigger: AGAACCAGTAACTTTGTCCCAAATGCTTCTTTGGCT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR GCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACACTGTGTTCTATAATTTaGCACAGTCACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTLCSII*HSHLIL
Trigger: CAAAATGAGGTGACTGTGGCAAATTATAGAACACAG...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATAGAAGTCTGGGTTTCTaGAAATTACAGAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNRSLGF*KLQKSS
Trigger: ACTTGATTTCTGTAATTTCCAGAAACCCAGACTTCT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTAAAATGGTTGGAAAATaGTTGAAGCAAGCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: AEITLAVLQVFNLSVILCKMVGK*LKQAPK
Trigger: TTTAGGAGCTTGCTTCAACCATTTTCCAACCATTTT...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CCA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAAGAAGTCTGGGTTTCTaGAAATTACAGAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTRSLGF*KLQKSS
Trigger: ACTTGATTTCTGTAATTTCCAGAAACCCAGACTTCT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
3UTR CAA 72 bp AGGGACAGAGAAATGTATATAGTAGAAGTCGTATCTTaGATGCCTACTTTTTACATTGAAGAAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RDREMYIVEVVS*MPTFYIEESGR
Trigger: TCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAAAGATACGACTTCTACTATATACATTTCTCTGTCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp GTGTGCGCTCGTGCAGCCGCAGCGCTGTCTTGGAACTCAGGCCCTTaGCGCACTGGCCGCAGCGGTGCCGCTCGCCGCCGCCCTCATGCA +
Preference number: 5 (lower is better)
Translates to: VCARAAAALSWNSGP*RTGRSGAARRRPHA
Trigger: TGCATGAGGGCGGCGGCGAGCGGCACCGCTGCGGCCAGTGCGGCAAGGGCCTGAGTTCCAAGACAGCGCTGCGGCTGCACGAGCGCACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 90 bp GCTACCCGCAGCCCAGTCCACGGCCACAAGGGCCGGGGTTTCCAGTaGGGCTTAAATCCGCCGCTGTCCTCGCCGCCCTCACGGCACCTC +
Preference number: 5 (lower is better)
Translates to: ATRSPVHGHKGRGFQ*GLNPPLSSPPSRHL
Trigger: GAGGTGCCGTGAGGGCGGCGAGGACAGCGGCGGATTTAAGCCCCACTGGAAACCCCGGCCCTTGTGGCCGTGGACTGGGCTGCGGGTAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 90 bp CCGCACTGGCCGCAGCGGTGCCGCTCGCCGCCGCCCTCATGCACCTaGAGCACGTGCCGCTTCACGTCCTTCTTGCGCTTGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: PHWPQRCRSPPPSCT*STCRFTSFLRLNFF
Trigger: GAAGAAGTTCAAGCGCAAGAAGGACGTGAAGCGGCACGTGCTGCAGGTGCATGAGGGCGGCGGCGAGCGGCACCGCTGCGGCCAGTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 90 bp GGACGCCGCTCGGCCACTCCAAAGACGACCCAGAGAACAAACTACTaGAGCCACAGAGAAGCCCCTCCTCGGCCCGACGCGCCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GRRSATPKTTQRTNY*SHREAPPRPDAPPP
Trigger: GGGAGGCGGCGCGTCGGGCCGAGGAGGGGCTTCTCTGTGGCTGCAGTAGTTTGTTCTCTGGGTCGTCTTTGGAGTGGCCGAGCGGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 90 bp GCTGCGTATCCGCCGAATCTCATTGGCATTCCGGCCGCCTCCCAGTaGGCCCGGCATCTGCACCAACGTCGGCGGCCCCTGAATCCCCGA +
Preference number: 5 (lower is better)
Translates to: AAYPPNLIGIPAASQ*ARHLHQRRRPLNPR
Trigger: TCGGGGATTCAGGGGCCGCCGACGTTGGTGCAGATGCCGGGCGCACTGGGAGGCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CCA 90 bp GGGCAGTCTGCGGCCGGTGACAGCTGCGTATCCGCCGAATCTCATTaGCATTCCGGCCGCCTCCCAGTGCGCCCGGCATCTGCACCAACG +
Preference number: 5 (lower is better)
Translates to: GQSAAGDSCVSAESH*HSGRLPVRPASAPT
Trigger: CGTTGGTGCAGATGCCGGGCGCACTGGGAGGCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 90 bp CAGGCACTGGAGGTGGCGACAGGGCAGTCTGCGGCCGGTGACAGCTaGGTATCCGCCGAATCTCATTGGCATTCCGGCCGCCTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: QALEVATGQSAAGDS*VSAESHWHSGRLPV
Trigger: CACTGGGAGGCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS TCA 90 bp TGGAGTGCAGGCACTGGAGGTGGCGACAGGGCAGTCTGCGGCCGGTaGCAGCTGCGTATCCGCCGAATCTCATTGGCATTCCGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WSAGTGGGDRAVCGR*QLRIRRISLAFRPP
Trigger: AGGCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CCA 90 bp AGCTCGCATGGGAAATGGCGCTCGCTGCTGTGCACGTGGCGCTGGTaGCTCTTCAGGTTGCAGCGGTTGGCGAAGGTCTGGCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SSHGKWRSLLCTWRW*LFRLQRLAKVWPQV
Trigger: CACCTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 90 bp CACAGCTCGCATGGGAAATGGCGCTCGCTGCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAGCGGTTGGCGAAGGTCTGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: HSSHGKWRSLLCTWR*WLFRLQRLAKVWPQ
Trigger: CTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 90 bp GGAATCCGTGAGACCACTGGGGTGAGGGCCATCGGTGGCCACACTTaGCCTGGGGGCAGGAGCAGCACTAACTTGGGAGCCACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: GIRETTGVRAIGGHT*PGGRSSTNLGATAH
Trigger: GTGAGCAGTGGCTCCCAAGTTAGTGCTGCTCCTGCCCCCAGGGCAAGTGTGGCCACCGATGGCCCTCACCCCAGTGGTCTCACGGATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp TTCCCGCACAGCTCGCATGGGAAATGGCGCTCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCGAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FPHSSHGKWRSLLCT*RWWLFRLQRLAKVW
Trigger: CCAGACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCTGTGCGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 90 bp GCGATTTCCTATGTTGCTTGGCTACTGGAGTGCAGGCACTGGAGGTaGCGACAGGGCAGTCTGCGGCCGGTGACAGCTGCGTATCCGCCG +
Preference number: 5 (lower is better)
Translates to: AISYVAWLLECRHWR*RQGSLRPVTAAYPP
Trigger: CGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS-3UTR CAA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCACGCCGAAGAGTGGACTaGTCGGTGAATGTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: ESSTALPARLWPAHEQRPRRRVD*SVNVRP
Trigger: CGGACGGACATTCACCGACAAGTCCACTCTTCGGCG...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp AACTTCTTCCCGCACAGCTCGCATGGGAAATGGCGCTCGCTGCTGTaGACGTGGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: NFFPHSSHGKWRSLL*TWRWWLFRLQRLAK
Trigger: CTTCGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCTGTGCGGGAAGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 90 bp TGGCCGCAGGTGTCGCAGCGGTACACCACCTCGGTGGCCACGCCGTaGCGGTGCTTGCTGTGCTTCAGGAAGCTCTTCTCATACAGAAAC +
Preference number: 5 (lower is better)
Translates to: WPQVSQRYTTSVATP*RCLLCFRKLFSYRN
Trigger: GTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTGCGACACCTGCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS TCA 90 bp ACATGCCATTGCTGGCTCTCTCTCCTGGGTAGTCCAAGGAATCCGTaGGACCACTGGGGTGAGGGCCATCGGTGGCCACACTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TCHCWLSLLGSPRNP*DHWGEGHRWPHLPW
Trigger: CCAGGGCAAGTGTGGCCACCGATGGCCCTCACCCCAGTGGTCTCACGGATTCCTTGGACTACCCAGGAGAGAGAGCCAGCAATGGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp CACCTGCCTGGCAACCCTCATTTTTGGAAACCTGCTCCATCTCCGTaGCCACCCTGTCCGGGCTTTGGTCCTGGGGACACCTGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: HLPGNPHFWKPAPSP*PPCPGFGPGDTCSP
Trigger: GGGACTACAGGTGTCCCCAGGACCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp TGTCGCAGCGGTACACCACCTCGGTGGCCACGCCGTGGCGGTGCTTaGTGTGCTTCAGGAAGCTCTTCTCATACAGAAACGCCTTCTCGC +
Preference number: 5 (lower is better)
Translates to: CRSGTPPRWPRRGGA*CASGSSSHTETPSR
Trigger: GCGAGAAGGCGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTGCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 90 bp CAGGTGTCGCAGCGGTACACCACCTCGGTGGCCACGCCGTGGCGGTaGTTGCTGTGCTTCAGGAAGCTCTTCTCATACAGAAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: QVSQRYTTSVATPWR*LLCFRKLFSYRNAF
Trigger: GAAGGCGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTGCGACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 90 bp CTGAGCGCGATTTCCTATGTTGCTTGGCTACTGGAGTGCAGGCACTaGAGGTGGCGACAGGGCAGTCTGCGGCCGGTGACAGCTGCGTAT +
Preference number: 5 (lower is better)
Translates to: LSAISYVAWLLECRH*RWRQGSLRPVTAAY
Trigger: ATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTGGTGGCTCTTCAGGTaGCAGCGGTTGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGWWLFR*QRLAKV
Trigger: GACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATGGCGCTGGAGGGCGTaGAGCTGGGTGAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGEALCRHLATFLITHLGWRWRA*SWVNCL
Trigger: CAAGCAGTTCACCCAGCTCAACGCCCTCCAGCGCCA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCGCCGAAGAGTGGACTaGTCGGTGAATGTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGRRRVD*SVNVRP
Trigger: CGGACGGACATTCACCGACAAGTCCACTCTTCGGCG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp TCCTCCAACTCAGCACCTGCCTGGCAACCCTCATTTTTGGAAACCTaGTCCATCTCCGTGCCCACCCTGTCCGGGCTTTGGTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SSNSAPAWQPSFLET*SISVPTLSGLWSWG
Trigger: TCCCCAGGACCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp GATGGTGGTGGCCAGGAGGGTGTCCTGGGACACCACGGAGTCATCTaGCTTGCAGGCTGTGTCAGCAGAACTGTTCTCCTGCATGGTAGG +
Preference number: 5 (lower is better)
Translates to: DGGGQEGVLGHHGVI*LAGCVSRTVLLHGR
Trigger: CCTACCATGCAGGAGAACAGTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCTGGCCACCACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 90 bp AAGTGGGTTCTGAGCGCGATTTCCTATGTTGCTTGGCTACTGGAGTaGAGGCACTGGAGGTGGCGACAGGGCAGTCTGCGGCCGGTGACA +
Preference number: 5 (lower is better)
Translates to: KWVLSAISYVAWLLE*RHWRWRQGSLRPVT
Trigger: TGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CCA 90 bp GTCAGCTCGCTAAGCTCACTGATGGTGGTGGCCAGGAGGGTGTCCTaGGACACCACGGAGTCATCTGCCTTGCAGGCTGTGTCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VSSLSSLMVVARRVS*DTTESSALQAVSAE
Trigger: TTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCTGGCCACCACCATCAGTGAGCTTAGCGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAGTCCGTCCGCACGCATaGCACATGAATGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LGEALCRHLATFLITHLGVRPHA*HMNGLS
Trigger: GGAGAGGCCATTCATGTGCAATGCGTGCGGACGGAC...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTGGCTGTGCTTGGACTaGGAGGAATGGGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGWLCLD*EEWGRC
Trigger: GCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCCA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp CAGCGGTACACCACCTCGGTGGCCACGCCGTGGCGGTGCTTGCTGTaGTTCAGGAAGCTCTTCTCATACAGAAACGCCTTCTCGCAAATG +
Preference number: 5 (lower is better)
Translates to: QRYTTSVATPWRCLL*FRKLFSYRNAFSQM
Trigger: CATTTGCGAGAAGGCGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGACGTCCTTCTTGCGCTaGAACTTCTTCCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGTSFLR*NFFPHS
Trigger: GCTGTGCGGGAAGAAGTTCAAGCGCAAGAAGGACGT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GAGAGCTCAACCGCACTTCCAGCCCGGTTGTGGCCTGCGCATGAGCAGAGGCCATCAGGCTGTTCAGTCTaGTGTCCGTCATCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ESSTALPARLWPAHEQRPSGCSV*CPSSFL
Trigger: CAAGAACGATGACGGACACAAGACTGAACAGCCTGA...TGGCCTCTGCTCATGCGCAGGCCACAACCGGGCTGGAAGTGCGGTTGAGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGGGTAGGTACAGTGTCTaGGACTGCAGCCAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGGRYSV*DCSQVV
Trigger: CACAACCTGGCTGCAGTCCAAGACACTGTACCTACC...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGATCTGAAGACATGCCATaGCTGGCTCTCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGEALCRHLATFLITHLGSEDMP*LALSPG
Trigger: CCCAGGAGAGAGAGCCAGCAATGGCATGTCTTCAGA...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGTCCGTCCGCACGCATaGCACATGAATGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRVRPHA*HMNGLS
Trigger: GGAGAGGCCATTCATGTGCAATGCGTGCGGACGGAC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGCTGCAGAGGCCATTCTaGCCCACATCTTTGCACATG +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGLQRPF*PTSLHM
Trigger: CATGTGCAAAGATGTGGGCAAGAATGGCCTCTGCAG...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp CATGTTGCTCAAAGAGTGAAGCTGTGTGGGCATCGAGTCTGTCTGTaGGGTCAGCTCGCTAAGCTCACTGATGGTGGTGGCCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HVAQRVKLCGHRVCL*GQLAKLTDGGGQEG
Trigger: ACCCTCCTGGCCACCACCATCAGTGAGCTTAGCGAGCTGACCCCACAGACAGACTCGATGCCCACACAGCTTCACTCTTTGAGCAACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGATTCTCATGTGCGTCTaGAGCGCGGACGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASILMCV*SADGCE
Trigger: CTCGCAGCCGTCCGCGCTCAAGACGCACATGAGAAT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATCAGCATGGCTGTGCTaGGACTTGGAGGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRSAWLC*DLEEWG
Trigger: GCCCCATTCCTCCAAGTCCAAGCACAGCCATGCTGA...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGACCTAAATGGCCCTTCTaGAGGCTCTGGGAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRPKWPF*RLWERH
Trigger: GTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTTAGG...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp TTGACAATTCCTCCAACTCAGCACCTGCCTGGCAACCCTCATTTTTaGAAACCTGCTCCATCTCCGTGCCCACCCTGTCCGGGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LTIPPTQHLPGNPHF*KPAPSPCPPCPGFG
Trigger: ACCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAGGAATTGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp TCCGGCCCTGCTTTCTTTGACAATTCCTCCAACTCAGCACCTGCCTaGCAACCCTCATTTTTGGAAACCTGCTCCATCTCCGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SGPAFFDNSSNSAPA*QPSFLETCSISVPT
Trigger: GGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAGGAATTGTCAAAGAAAGCAGGGCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGAGTGTGCTGAGACTTTaGGTCCCTACTGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGSVLRL*VPTAMF
Trigger: GAACATAGCAGTAGGGACCAAAAGTCTCAGCACACT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp TCTCAATCAACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTGCTTaGCTACTGGAGTGCAGGCACTGGAGGTGGCGACAGGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SQSTKWVLSAISYVA*LLECRHWRWRQGSL
Trigger: CAGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTTGATTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAACGCCGTGGCGGTGCTaGCTGTGCTTCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSTPWRC*LCFRKL
Trigger: GAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCGCTTCACGTCCTTCTaGCGCTTGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASRFTSF*RLNFFP
Trigger: CGGGAAGAAGTTCAAGCGCAAGAAGGACGTGAAGCG...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTTGGAACTCAGGCCCTaGCCGCACTGGCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LMPTFYIEESGRELNRTSLELRP*PHWPQR
Trigger: CCGCTGCGGCCAGTGCGGCAAGGGCCTGAGTTCCAA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTAGCCGCAGCGCTGTCTaGGAACTCAGGCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVSRSAV*ELRPLP
Trigger: CGGCAAGGGCCTGAGTTCCAAGACAGCGCTGCGGCT...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAAGCTGGGTGAACTGCTaGCCGCACTGGTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: LCNQSPTGLRFSVLRDRESWVNC*PHWSQQ
Trigger: CTGCTGTGACCAGTGCGGCAAGCAGTTCACCCAGCT...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp ACGGAGTCATCTGCCTTGCAGGCTGTGTCAGCAGAACTGTTCTCCTaGATGGTAGGTACAGTGTCTTGGACTGCAGCCAGGTTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: TESSALQAVSAELFS*MVGTVSWTAARLWK
Trigger: TTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAGTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 90 bp GATTTCTCAATCAACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTaGTTGGCTACTGGAGTGCAGGCACTGGAGGTGGCGACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: DFSINKVGSERDFLC*LATGVQALEVATGQ
Trigger: CTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTTGATTGAGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGTTCTTCTTGTCTAGTTaGTCCTTGGACTTCTTCGGT +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGFFLSS*SLDFFG
Trigger: ACCGAAGAAGTCCAAGGACAAACTAGACAAGAAGAA...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTTCAGGTTGCAGCGGTaGGCGAAGGTCTGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVFRLQR*AKVWPQ
Trigger: CTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGAA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATTTGGAACTCAGGCCCTaGCCGCACTGGCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNLELRP*PHWPQR
Trigger: CCGCTGCGGCCAGTGCGGCAAGGGCCTGAGTTCCAA...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCAGCCGCAGCGCTGTCTaGGAACTCAGGCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLASRSAV*ELRPLP
Trigger: CGGCAAGGGCCTGAGTTCCAAGACAGCGCTGCGGCT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTAGCTGGGTGAACTGCTaGCCGCACTGGTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCSWVNC*PHWSQQ
Trigger: CTGCTGTGACCAGTGCGGCAAGCAGTTCACCCAGCT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGATTACGCTAGCAGTTTaGCAGGTGTTCAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGITLAV*QVFNLS
Trigger: TGACAGATTGAACACCTGCAAAACTGCTAGCGTAAT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GGAGGAATGGGGCAGATGCTCCAGGAGGTCCTCTGTAACCAGTCCCCTACAGGGACGACAGCAAAGAATTaGGTAAAACGAAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GGMGQMLQEVLCNQSPTGTTAKN*VKRKAA
Trigger: TGCAGCCTTTCGTTTTACCAAATTCTTTGCTGTCGT...CCCTGTAGGGGACTGGTTACAGAGGACCTCCTGGAGCATCTGCCCCATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTCACCCTGTCCGGGCTTaGGTCCTGGGGACACCTGTA +
Preference number: 5 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIHPVRA*VLGTPV
Trigger: TACAGGTGTCCCCAGGACCAAAGCCCGGACAGGGTG...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTGGCAACCCTCATTTTaGGAAACCTGCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASWQPSF*ETCSIS
Trigger: GGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGACGCCGTGGCGGTGCTaGCTGTGCTTCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLTPWRC*LCFRKL
Trigger: GAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTGGTGGCTCTTCAGGTaGCAGCGGTTGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVWWLFR*QRLAKV
Trigger: GACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTGGCGCTGGAGGGCGTaGAGCTGGGTGAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLWRWRA*SWVNCL
Trigger: CAAGCAGTTCACCCAGCTCAACGCCCTCCAGCGCCA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CACACTTGGGACCAATCCACTCAGATGGTGGCCTCGCTTCCACTCAGCATGGCTTTCCTCATTACACACTaGGGACCAATCCACTCAGAT +
Preference number: 5 (lower is better)
Translates to: HTWDQSTQMVASLPLSMAFLITH*GPIHSD
Trigger: ATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAA...AGCCATGCTGAGTGGAAGCGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp CGCAGACTAACAGGATGGGAACTGCTTGAAGCTCTTATTCCATGTTaGTCAAAGAGTGAAGCTGTGTGGGCATCGAGTCTGTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: RRLTGWELLEALIPC*SKSEAVWASSLSVG
Trigger: CCCCACAGACAGACTCGATGCCCACACAGCTTCACTCTTTGAGCAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTGTTAGTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATCACCCTGTCCGGGCTTaGGTCCTGGGGACACCTGTA +
Preference number: 5 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNHPVRA*VLGTPV
Trigger: TACAGGTGTCCCCAGGACCAAAGCCCGGACAGGGTG...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACCGGCCCTGCTTTCTTaGACAATTCCTCCAACTCAG +
Preference number: 5 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREPALLS*TIPPTQ
Trigger: CTGAGTTGGAGGAATTGTCAAAGAAAGCAGGGCCGG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTTTCAGGTTGCAGCGGTaGGCGAAGGTCTGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCFRLQR*AKVWPQ
Trigger: CTGCGGCCAGACCTTCGCCAACCGCTGCAACCTGAA...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTCGCTTCACGTCCTTCTaGCGCTTGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCRFTSF*RLNFFP
Trigger: CGGGAAGAAGTTCAAGCGCAAGAAGGACGTGAAGCG...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCATTCTCATGTGCGTCTaGAGCGCGGACGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: LMPTFYIEESGRELNRTSILMCV*SADGCE
Trigger: CTCGCAGCCGTCCGCGCTCAAGACGCACATGAGAAT...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTGGGAGAGGCACTGTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGAAATTTATCCGAAAGCTaGGATGACACATACTCTTCG +
Preference number: 5 (lower is better)
Translates to: LGEALCRHLATFLITHLGNLSES*DDTYSS
Trigger: CGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATT...TCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCACAGTGCCTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp GCTGTGTCAGCAGAACTGTTCTCCTGCATGGTAGGTACAGTGTCTTaGACTGCAGCCAGGTTGTGGAAATGGCCATTTTCTGCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: AVSAELFSCMVGTVS*TAARLWKWPFSAKD
Trigger: GTCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAGTTCTGCTGACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCGCAGCCAGCACTGCCTaGTGGGCCATGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LMPTFYIEESGRELNRTSAASTA*WAMKSL
Trigger: CAAAGACTTCATGGCCCACAAGGCAGTGCTGGCTGC...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTCCGGCCCTGCTTTCTTaGACAATTCCTCCAACTCAG +
Preference number: 5 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCPALLS*TIPPTQ
Trigger: CTGAGTTGGAGGAATTGTCAAAGAAAGCAGGGCCGG...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGATGCTGCACTTAAAGTaGCTCTTCTTCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASMLHLK*LFFFSP
Trigger: AGGGGAGAAGAAGAAGAGCAACTTTAAGTGCAGCAT...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATGTCCGTCATCGTTCTaGGGCGAGCCATCTACAATG +
Preference number: 5 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSCPSSF*GEPSTM
Trigger: CATTGTAGATGGCTCGCCCAAGAACGATGACGGACA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAGTTTTGCTAGACTCTTaGGTAGGACAGCTTTTACCT +
Preference number: 5 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRVLLDS*VGQLLP
Trigger: AGGTAAAAGCTGTCCTACCAAAGAGTCTAGCAAAAC...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTGGCTGTGCTTGGACTaGGAGGAATGGGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: LMPTFYIEESGRELNRTSWLCLD*EEWGRC
Trigger: GCATCTGCCCCATTCCTCCAAGTCCAAGCACAGCCA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCTCAGCATGGCTGTGCTaGGACTTGGAGGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLASAWLC*DLEEWG
Trigger: GCCCCATTCCTCCAAGTCCAAGCACAGCCATGCTGA...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTGCCGGCACCTGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGAACGACAGCAAAGAATTaGGTAAAACGAAAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VPAPGHFPHYTLGTNPLRTTAKN*VKRKAA
Trigger: TGCAGCCTTTCGTTTTACCAAATTCTTTGCTGTCGT...TCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCAGGTGCCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 90 bp GTCAGCAGAACTGTTCTCCTGCATGGTAGGTACAGTGTCTTGGACTaGAGCCAGGTTGTGGAAATGGCCATTTTCTGCAAAAGACAGCAA +
Preference number: 5 (lower is better)
Translates to: VSRTVLLHGRYSVLD*SQVVEMAIFCKRQQ
Trigger: TTGCTGTCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAGTTCTGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTGCAGCCAGCACTGCCTaGTGGGCCATGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCAASTA*WAMKSL
Trigger: CAAAGACTTCATGGCCCACAAGGCAGTGCTGGCTGC...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGACGTCCTTCTTGCGCTaGAACTTCTTCCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLTSFLR*NFFPHS
Trigger: GCTGTGCGGGAAGAAGTTCAAGCGCAAGAAGGACGT...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTGGTAGGTACAGTGTCTaGGACTGCAGCCAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: NLVKRKAAHPFGVWADSIGRYSV*DCSQVV
Trigger: CACAACCTGGCTGCAGTCCAAGACACTGTACCTACC...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCACGGAGTCATCTGCCTaGCAGGCTGTGTCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLATESSA*QAVSAE
Trigger: TTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTCCTAAATGGCCCTTCTaGAGGCTCTGGGAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCPKWPF*RLWERH
Trigger: GTGCCTCTCCCAGAGCCTCAAGAAGGGCCATTTAGG...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTTATTCTTATCGTGTATaGAGGTGTGCCGCCGAAGAG +
Preference number: 5 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCYSYRV*RCAAEE
Trigger: CTCTTCGGCGGCACACCTCAATACACGATAAGAATA...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TTGATGCCTACTTTTTACATTGAAGAAAGTGGCAGAGAGCTCAACCGCACTTCCTGTCCGTCATCGTTCTaGGGCGAGCCATCTACAATG +
Preference number: 5 (lower is better)
Translates to: LMPTFYIEESGRELNRTSCPSSF*GEPSTM
Trigger: CATTGTAGATGGCTCGCCCAAGAACGATGACGGACA...GGAAGTGCGGTTGAGCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp TGGCCACTTTCCTCATTACACACTTGGGACCAATCCACTCAGATGGTGGCCTCGTCTGTCAGTCATACTTaGTTTACTGCCTACAAATGG +
Preference number: 5 (lower is better)
Translates to: WPLSSLHTWDQSTQMVASSVSHT*FTAYKW
Trigger: CCATTTGTAGGCAGTAAACAAAGTATGACTGACAGA...CGAGGCCACCATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAAAGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 90 bp TTCTCCTGCATGGTAGGTACAGTGTCTTGGACTGCAGCCAGGTTGTaGAAATGGCCATTTTCTGCAAAAGACAGCAATTTATCCGAAAGC +
Preference number: 5 (lower is better)
Translates to: FSCMVGTVSWTAARL*KWPFSAKDSNLSES
Trigger: GCTTTCGGATAAATTGCTGTCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS-3UTR CAA 90 bp AATTTGGTAAAACGAAAGGCTGCACATCCCTTTGGAGTTTGGGCTGACAGCATTTCAGGCTGTTCAGTCTaGTGTCCGTCATCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NLVKRKAAHPFGVWADSISGCSV*CPSSFL
Trigger: CAAGAACGATGACGGACACAAGACTGAACAGCCTGA...AATGCTGTCAGCCCAAACTCCAAAGGGATGTGCAGCCTTTCGTTTTACCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAACGGAGTCATCTGCCTaGCAGGCTGTGTCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTTESSA*QAVSAE
Trigger: TTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS TCA 90 bp GCAGTAGGGACGCTCCCCTGTGTGGACTTTAATATGCTGGTACAGTaGATTCCGCTGGGCAAAAGTCCTGAAACATACTTCACATTTAAA +
Preference number: 5 (lower is better)
Translates to: AVGTLPCVDFNMLVQ*IPLGKSPETYFTFK
Trigger: TTTAAATGTGAAGTATGTTTCAGGACTTTTGCCCAGCGGAATTCACTGTACCAGCATATTAAAGTCCACACAGGGGAGCGTCCCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS TCA 90 bp GTTCAGTCTTGTGTCCGTCATCGTTCTTGGGCGAGCCATCTACAATaGCAAGGAAAGACTTCCATGGAGTATTCTTATCGTGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: VQSCVRHRSWASHLQ*QGKTSMEYSYRVLR
Trigger: CCTCAATACACGATAAGAATACTCCATGGAAGTCTTTCCTTGTCATTGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS TCA 90 bp GTTCAGTCTTGTGTCCGTCATCGTTCTTGGGCGAGCCATCTACAATaGCAAGGAAAGACTTCCATGGAGTATTCTTATCGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: VQSCVRHRSWASHLQ*QGKTSMEYSYRVSV
Trigger: CACAGATACACGATAAGAATACTCCATGGAAGTCTTTCCTTGTCATTGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477239.1
CDS CCA 90 bp CCACATCATCTTGAGTTCAGCTACCACACACGCAGACTAACAGGATaGGAACTGCTTGAAGCTCTTATTCCATGTTGCTCAAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: PHHLEFSYHTRRLTG*ELLEALIPCCSKSE
Trigger: TTCACTCTTTGAGCAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTGTTAGTCTGCGTGTGTGGTAGCTGAACTCAAGATGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACCAGTATGGATTCTATaGTGGTGTTTTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREPVWIL*WCFKYS
Trigger: GGAGTACTTAAAACACCACAATAGAATCCATACTGG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTCAGGATGGGAACTGCTaGAAGCTCTTATTCCATGTT +
Preference number: 5 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVQDGNC*KLLFHV
Trigger: AACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTG...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCATGCCTACTTTTTACATaGAAGAAAGTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSCLLFT*KKVAES
Trigger: GCTCTCTGCCACTTTCTTCAATGTAAAAAGTAGGCA...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAAATGTATGGTTGGAAAATGGTaGAAGCAAGCTCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: VTSPLQGYVSLFSGTEKCMVGKW*KQAPKW
Trigger: CCATTTAGGAGCTTGCTTCAACCATTTTCCAACCAT...ACATTTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS TCA 90 bp ATGGCCATTTTCTGCAAAAGACAGCAATTTATCCGAAAGCTTGGATaGCACATACTCTTCGTCAGGCTGTTCAGTCTTGTGTCCGTCATC +
Preference number: 5 (lower is better)
Translates to: MAIFCKRQQFIRKLG*HILFVRLFSLVSVI
Trigger: GATGACGGACACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATTGCTGTCTTTTGCAGAAAATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CCA 90 bp GGAAATGGCCATTTTCTGCAAAAGACAGCAATTTATCCGAAAGCTTaGATGACACATACTCTTCGTCAGGCTGTTCAGTCTTGTGTCCGT +
Preference number: 5 (lower is better)
Translates to: GNGHFLQKTAIYPKA*MTHTLRQAVQSCVR
Trigger: ACGGACACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATTGCTGTCTTTTGCAGAAAATGGCCATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCTTAAATGGGGAGGATTaGGATTCCAGCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLALNGED*DSSRTA
Trigger: TGCAGTTCTGCTGGAATCCAAATCCTCCCCATTTAA...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACATGGCAACCCTCATTTTaGGAAACCTGCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTWQPSF*ETCSIS
Trigger: GGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCA...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTTATTCTTATCGTGTATaGAGGTGTGCCGCCGAAGAG +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCYSYRV*RCAAEE
Trigger: CTCTTCGGCGGCACACCTCAATACACGATAAGAATA...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGGGCAGGTGTGAAGCATGTTATCAGCGCCTGAAACACCTTGTAGTGGTTTCAAATTTATCCGAAAGCTaGGATGACACATACTCTTCG +
Preference number: 5 (lower is better)
Translates to: KGRCEACYQRLKHLVVVSNLSES*DDTYSS
Trigger: CGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATT...TGAAACCACTACAAGGTGTTTCAGGCGCTGATAACATGCTTCACACCTGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CTCTGTAACCAGTCCCCTACAGGGTTACGTTTCTCTGTTCTCAGGGACAGAGAACACAGAAAATCTGATTaGCTTCAATTCAACAGGGAA +
Preference number: 5 (lower is better)
Translates to: LCNQSPTGLRFSVLRDREHRKSD*LQFNRE
Trigger: TTCCCTGTTGAATTGAAGCAAATCAGATTTTCTGTG...TTCTCTGTCCCTGAGAACAGAGAAACGTAACCCTGTAGGGGACTGGTTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CAGAGTGAGAAGCCAGGAAGACTGCTAACTACAATATCAGGAGCTGGTTCAGTTTTTCTTCAGTTGCATTaGAGGGTCCCCACAGAAAAT +
Preference number: 5 (lower is better)
Translates to: QSEKPGRLLTTISGAGSVFLQLH*RVPTEN
Trigger: ATTTTCTGTGGGGACCCTCAAATGCAACTGAAGAAA...AACTGAACCAGCTCCTGATATTGTAGTTAGCAGTCTTCCTGGCTTCTCACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCAGACATGTCAGTTACTaGCCTGTTTCCATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLARHVSY*PVSISR
Trigger: CCTAGAGATGGAAACAGGCAAGTAACTGACATGTCT...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGTTCCTCATTACACACTaGGGACCAATCCACTCAGAT +
Preference number: 5 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLFLITH*GPIHSD
Trigger: ATCTGAGTGGATTGGTCCCAAGTGTGTAATGAGGAA...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTTTAAATGGGGAGGATTaGGATTCCAGCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCLNGED*DSSRTA
Trigger: TGCAGTTCTGCTGGAATCCAAATCCTCCCCATTTAA...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTCTTCCACCTGTACCTTaGCAGTGTAGACAAACTCAA +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCLPPVP*QCRQTQ
Trigger: TTGAGTTTGTCTACACTGCAAAGGTACAGGTGGAAG...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTTTGTCTAGTTTGTCCTaGGACTTCTTCGGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCLSSLS*DFFGGK
Trigger: TTTGCCACCGAAGAAGTCCAAGGACAAACTAGACAA...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCTTCTTCTTGTCTAGTTaGTCCTTGGACTTCTTCGGT +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAFFLSS*SLDFFG
Trigger: ACCGAAGAAGTCCAAGGACAAACTAGACAAGAAGAA...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp AAGCACGTGGCACATACTCAAGGCCCTAGAACCAAATGTCAACGTTTAACAAATATGCTGCACTTAAAGTaGCTCTTCTTCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: KHVAHTQGPRTKCQRLTNMLHLK*LFFFSP
Trigger: AGGGGAGAAGAAGAAGAGCAACTTTAAGTGCAGCAT...ATTTGTTAAACGTTGACATTTGGTTCTAGGGCCTTGAGTATGTGCCACGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCTGAGATTACGCTAGCAGTTTTGCAGGTGTTCAATCTGTCAGTCATACTTTGTCAGGATGGGAACTGCTaGAAGCTCTTATTCCATGTT +
Preference number: 5 (lower is better)
Translates to: AEITLAVLQVFNLSVILCQDGNC*KLLFHV
Trigger: AACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTG...ACAAAGTATGACTGACAGATTGAACACCTGCAAAACTGCTAGCGTAATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp GCAGAGGCCATTCTTGCCCACATCTTTGCACATGGACAATTATTTTTCTTAGCCGTTTTGCTAGACTCTTaGGTAGGACAGCTTTTACCT +
Preference number: 5 (lower is better)
Translates to: AEAILAHIFAHGQLFFLAVLLDS*VGQLLP
Trigger: AGGTAAAAGCTGTCCTACCAAAGAGTCTAGCAAAAC...GGCTAAGAAAAATAATTGTCCATGTGCAAAGATGTGGGCAAGAATGGCCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAAGTGTGCTGAGACTTTaGGTCCCTACTGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTSVLRL*VPTAMF
Trigger: GAACATAGCAGTAGGGACCAAAAGTCTCAGCACACT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACATTGTCTAGTTTGTCCTaGGACTTCTTCGGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTLSSLS*DFFGGK
Trigger: TTTGCCACCGAAGAAGTCCAAGGACAAACTAGACAA...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp ACTGCTATGTTCTCACATGCTCCCAAGGAAATAGACATGTCAGTTACTTGCCTGCCAGTATGGATTCTATaGTGGTGTTTTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: TAMFSHAPKEIDMSVTCLPVWIL*WCFKYS
Trigger: GGAGTACTTAAAACACCACAATAGAATCCATACTGG...CAGGCAAGTAACTGACATGTCTATTTCCTTGGGAGCATGTGAGAACATAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAATTACGCTAGCAGTTTaGCAGGTGTTCAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTITLAV*QVFNLS
Trigger: TGACAGATTGAACACCTGCAAAACTGCTAGCGTAAT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS-3UTR CAA 90 bp CATGGACAATTATTTTTCTTAGCCCCACATCATCTTGAGTTCAGCTACCACACAATGGTTGGAAAATGGTaGAAGCAAGCTCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: HGQLFFLAPHHLEFSYHTMVGKW*KQAPKW
Trigger: CCATTTAGGAGCTTGCTTCAACCATTTTCCAACCAT...TGTGTGGTAGCTGAACTCAAGATGATGTGGGGCTAAGAAAAATAATTGTCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 72 bp CGAGGCTCACGGGGCCAGAGCCCTTCCAGGAGACGCTaGTACCCGCAGCCCAGTCCACGGCCACAAGGGCCG +
Preference number: 6 (lower is better)
Translates to: RGSRGQSPSRRR*YPQPSPRPQGP
Trigger: CGGCCCTTGTGGCCGTGGACTGGGCTGCGGGTAGCAGCGTCTCCTGGAAGGGCTCTGGCCCCGTGAGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 72 bp CCGCAGCGGTGCCGCTCGCCGCCGCCCTCATGCACCTaGAGCACGTGCCGCTTCACGTCCTTCTTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: PQRCRSPPPSCT*STCRFTSFLRL
Trigger: CAAGCGCAAGAAGGACGTGAAGCGGCACGTGCTGCAGGTGCATGAGGGCGGCGGCGAGCGGCACCGCTGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 72 bp CCGCCGAATCTCATTGGCATTCCGGCCGCCTCCCAGTaGGCCCGGCATCTGCACCAACGTCGGCGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PPNLIGIPAASQ*ARHLHQRRRPL
Trigger: CAGGGGCCGCCGACGTTGGTGCAGATGCCGGGCGCACTGGGAGGCGGCCGGAATGCCAATGAGATTCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 72 bp TTCCTTCCAAAAACAGCTCCCAGCCGGCGCCCCCGCTaGAGCCGCTGTCCGCTGGACCAGGCCGGTAGGAAC +
Preference number: 6 (lower is better)
Translates to: FLPKTAPSRRPR*SRCPLDQAGRN
Trigger: GTTCCTACCGGCCTGGTCCAGCGGACAGCGGCTGCAGCGGGGGCGCCGGCTGGGAGCTGTTTTTGGAAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338121.10
CDS CCA 72 bp GCGGCCGGTGACAGCTGCGTATCCGCCGAATCTCATTaGCATTCCGGCCGCCTCCCAGTGCGCCCGGCATCT +
Preference number: 6 (lower is better)
Translates to: AAGDSCVSAESH*HSGRLPVRPAS
Trigger: AGATGCCGGGCGCACTGGGAGGCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 72 bp GAGACCACTGGGGTGAGGGCCATCGGTGGCCACACTTaGCCTGGGGGCAGGAGCAGCACTAACTTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: ETTGVRAIGGHT*PGGRSSTNLGA
Trigger: GGCTCCCAAGTTAGTGCTGCTCCTGCCCCCAGGGCAAGTGTGGCCACCGATGGCCCTCACCCCAGTGGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 72 bp GAGGTGGCGACAGGGCAGTCTGCGGCCGGTGACAGCTaGGTATCCGCCGAATCTCATTGGCATTCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: EVATGQSAAGDS*VSAESHWHSGR
Trigger: GCGGCCGGAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CCA 72 bp AGCTCGCATGGGAAATGGCGCTCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: SSHGKWRSLLCT*RWWLFRLQRLA
Trigger: CGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATGCGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS TCA 72 bp GGCACTGGAGGTGGCGACAGGGCAGTCTGCGGCCGGTaGCAGCTGCGTATCCGCCGAATCTCATTGGCATTC +
Preference number: 6 (lower is better)
Translates to: GTGGGDRAVCGR*QLRIRRISLAF
Trigger: GAATGCCAATGAGATTCGGCGGATACGCAGCTGTCACCGGCCGCAGACTGCCCTGTCGCCACCTCCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 72 bp TGCCGCTCGCCGCCGCCCTCATGCACCTGCAGCACGTaGCGCTTCACGTCCTTCTTGCGCTTGAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: CRSPPPSCTCST*RFTSFLRLNFF
Trigger: GAAGAAGTTCAAGCGCAAGAAGGACGTGAAGCGGCACGTGCTGCAGGTGCATGAGGGCGGCGGCGAGCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 72 bp GTGTCGCAGCGGTACACCACCTCGGTGGCCACGCCGTaGCGGTGCTTGCTGTGCTTCAGGAAGCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VSQRYTTSVATP*RCLLCFRKLFS
Trigger: TGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTGCGACAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CCA 72 bp CATGGGAAATGGCGCTCGCTGCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAGCGGTTGGCGAAGGTC +
Preference number: 6 (lower is better)
Translates to: HGKWRSLLCTWR*WLFRLQRLAKV
Trigger: GACCTTCGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCATTTCCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS TCA 72 bp TGCTGGCTCTCTCTCCTGGGTAGTCCAAGGAATCCGTaGGACCACTGGGGTGAGGGCCATCGGTGGCCACAC +
Preference number: 6 (lower is better)
Translates to: CWLSLLGSPRNP*DHWGEGHRWPH
Trigger: GTGTGGCCACCGATGGCCCTCACCCCAGTGGTCTCACGGATTCCTTGGACTACCCAGGAGAGAGAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 90 bp GTGTCGCAGCGGTACACCACCTCGGTGGCCACGCCGTGGCGGTGCTaGCTGTGCTTCAGGAAGCTCTTCTCATACAGAAACGCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: VSQRYTTSVATPWRC*LCFRKLFSYRNAFS
Trigger: CGAGAAGGCGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTGCGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 72 bp GGCAACCCTCATTTTTGGAAACCTGCTCCATCTCCGTaGCCACCCTGTCCGGGCTTTGGTCCTGGGGACACC +
Preference number: 6 (lower is better)
Translates to: GNPHFWKPAPSP*PPCPGFGPGDT
Trigger: GGTGTCCCCAGGACCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 72 bp CAGCGGTACACCACCTCGGTGGCCACGCCGTGGCGGTaGTTGCTGTGCTTCAGGAAGCTCTTCTCATACAGA +
Preference number: 6 (lower is better)
Translates to: QRYTTSVATPWR*LLCFRKLFSYR
Trigger: TCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACCGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 72 bp GGCCAGGAGGGTGTCCTGGGACACCACGGAGTCATCTaGCTTGCAGGCTGTGTCAGCAGAACTGTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GQEGVLGHHGVI*LAGCVSRTVLL
Trigger: CAGGAGAACAGTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CCA 72 bp CTAAGCTCACTGATGGTGGTGGCCAGGAGGGTGTCCTaGGACACCACGGAGTCATCTGCCTTGCAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSSLMVVARRVS*DTTESSALQAV
Trigger: CACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCTGGCCACCACCATCAGTGAGCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 72 bp TCAGCACCTGCCTGGCAACCCTCATTTTTGGAAACCTaGTCCATCTCCGTGCCCACCCTGTCCGGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: SAPAWQPSFLET*SISVPTLSGLW
Trigger: CCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 72 bp ACCACCTCGGTGGCCACGCCGTGGCGGTGCTTGCTGTaGTTCAGGAAGCTCTTCTCATACAGAAACGCCTTC +
Preference number: 6 (lower is better)
Translates to: TTSVATPWRCLL*FRKLFSYRNAF
Trigger: GAAGGCGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS GCA 72 bp GGTACACCACCTCGGTGGCCACGCCGTGGCGGTGCTTaGTGTGCTTCAGGAAGCTCTTCTCATACAGAAACG +
Preference number: 6 (lower is better)
Translates to: GTPPRWPRRGGA*CASGSSSHTET
Trigger: CGTTTCTGTATGAGAAGAGCTTCCTGAAGCACAGCAAGCACCGCCACGGCGTGGCCACCGAGGTGGTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CAA 90 bp GTGGTGGCCAGGAGGGTGTCCTGGGACACCACGGAGTCATCTGCCTaGCAGGCTGTGTCAGCAGAACTGTTCTCCTGCATGGTAGGTACA +
Preference number: 6 (lower is better)
Translates to: VVARRVSWDTTESSA*QAVSAELFSCMVGT
Trigger: TGTACCTACCATGCAGGAGAACAGTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCTGGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CAA 72 bp AGGAGGGTGTCCTGGGACACCACGGAGTCATCTGCCTaGCAGGCTGTGTCAGCAGAACTGTTCTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: RRVSWDTTESSA*QAVSAELFSCM
Trigger: CATGCAGGAGAACAGTTCTGCTGACACAGCCTGCAAGGCAGATGACTCCGTGGTGTCCCAGGACACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CCA 72 bp CAAAGAGTGAAGCTGTGTGGGCATCGAGTCTGTCTGTaGGGTCAGCTCGCTAAGCTCACTGATGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: QRVKLCGHRVCL*GQLAKLTDGGG
Trigger: GCCACCACCATCAGTGAGCTTAGCGAGCTGACCCCACAGACAGACTCGATGCCCACACAGCTTCACTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 90 bp TTTGACAATTCCTCCAACTCAGCACCTGCCTGGCAACCCTCATTTTaGGAAACCTGCTCCATCTCCGTGCCCACCCTGTCCGGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: FDNSSNSAPAWQPSF*ETCSISVPTLSGLW
Trigger: CCAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGTTGCCAGGCAGGTGCTGAGTTGGAGGAATTGTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 72 bp ACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTGCTTaGCTACTGGAGTGCAGGCACTGGAGGTGGCGACAG +
Preference number: 6 (lower is better)
Translates to: TKWVLSAISYVA*LLECRHWRWRQ
Trigger: CTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS GCA 72 bp ATCAACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTaGTTGGCTACTGGAGTGCAGGCACTGGAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: INKVGSERDFLC*LATGVQALEVA
Trigger: CGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CAA 72 bp TTATCGTGTATTGAGGTGTGCCGCCGAAGAGTGGACTaGTCGGTGAATGTCCGTCCGCACGCATTGCACATG +
Preference number: 6 (lower is better)
Translates to: LSCIEVCRRRVD*SVNVRPHALHM
Trigger: CATGTGCAATGCGTGCGGACGGACATTCACCGACAAGTCCACTCTTCGGCGGCACACCTCAATACACGATAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 72 bp AACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTGCTaGGCTACTGGAGTGCAGGCACTGGAGGTGGCGACA +
Preference number: 6 (lower is better)
Translates to: NKVGSERDFLCC*ATGVQALEVAT
Trigger: TGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CAA 90 bp GGAGTATTCTTATCGTGTATTGAGGTGTGCCGCCGAAGAGTGGACTaGTCGGTGAATGTCCGTCCGCACGCATTGCACATGAATGGCCTC +
Preference number: 6 (lower is better)
Translates to: GVFLSCIEVCRRRVD*SVNVRPHALHMNGL
Trigger: GAGGCCATTCATGTGCAATGCGTGCGGACGGACATTCACCGACAAGTCCACTCTTCGGCGGCACACCTCAATACACGATAAGAATACTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 90 bp TTCTCAATCAACAAAGTGGGTTCTGAGCGCGATTTCCTATGTTGCTaGGCTACTGGAGTGCAGGCACTGGAGGTGGCGACAGGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: FSINKVGSERDFLCC*ATGVQALEVATGQS
Trigger: AGACTGCCCTGTCGCCACCTCCAGTGCCTGCACTCCAGTAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTTGATTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS CAA 90 bp CTCTTCTCATACAGAAACGCCTTCTCGCAAATGCTGCACTTAAAGTaGCTCTTCTTCTTCTCCCCTTCTTCGTCCTCCTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFSYRNAFSQMLHLK*LFFFSPSSSSSSSS
Trigger: GGAGGAGGAGGAGGAGGACGAAGAAGGGGAGAAGAAGAAGAGCAACTTTAAGTGCAGCATTTGCGAGAAGGCGTTTCTGTATGAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000461789.1
CDS CAA 90 bp TCCGAAAGCTTGGATGACACATACTCTTCGTCAGGCTGTTCAGTCTaGTGTCCGTCATCGTTCTTGGGCGAGCCATCTACAATGACAAGG +
Preference number: 6 (lower is better)
Translates to: SESLDDTYSSSGCSV*CPSSFLGEPSTMTR
Trigger: CCTTGTCATTGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CAA 90 bp GGCTGTGTCAGCAGAACTGTTCTCCTGCATGGTAGGTACAGTGTCTaGGACTGCAGCCAGGTTGTGGAAATGGCCATTTTCTGCAAAAGA +
Preference number: 6 (lower is better)
Translates to: GCVSRTVLLHGRYSV*DCSQVVEMAIFCKR
Trigger: TCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAGTTCTGCTGACACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CAA 72 bp TCGTCAGGCTGTTCAGTCTTGTGTCCGTCATCGTTCTaGGGCGAGCCATCTACAATGACAAGGAAAGACTTC +
Preference number: 6 (lower is better)
Translates to: SSGCSVLCPSSF*GEPSTMTRKDF
Trigger: GAAGTCTTTCCTTGTCATTGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAACAGCCTGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CAA 72 bp TTGGATGACACATACTCTTCGTCAGGCTGTTCAGTCTaGTGTCCGTCATCGTTCTTGGGCGAGCCATCTACA +
Preference number: 6 (lower is better)
Translates to: LDDTYSSSGCSV*CPSSFLGEPST
Trigger: TGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 72 bp AAACATTTCAGCTTTTCAGCCACTTCCAGCATTCGCTaGACCCGATCTTCTTCCACCTGTACCTTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: KHFSFSATSSIR*TRSSSTCTFAV
Trigger: CACTGCAAAGGTACAGGTGGAAGAAGATCGGGTGCAGCGAATGCTGGAAGTGGCTGAAAAGCTGAAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS GCA 72 bp ACTGTTCTCCTGCATGGTAGGTACAGTGTCTTGGACTaGAGCCAGGTTGTGGAAATGGCCATTTTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: TVLLHGRYSVLD*SQVVEMAIFCK
Trigger: TTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 72 bp ACAGGATGGGAACTGCTTGAAGCTCTTATTCCATGTTaGTCAAAGAGTGAAGCTGTGTGGGCATCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: TGWELLEALIPC*SKSEAVWASSL
Trigger: CAGACTCGATGCCCACACAGCTTCACTCTTTGAGCAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 90 bp ACATACTCTTCGTCAGGCTGTTCAGTCTTGTGTCCGTCATCGTTCTaGGGCGAGCCATCTACAATGACAAGGAAAGACTTCCATGGAGTA +
Preference number: 6 (lower is better)
Translates to: TYSSSGCSVLCPSSF*GEPSTMTRKDFHGV
Trigger: TACTCCATGGAAGTCTTTCCTTGTCATTGTAGATGGCTCGCCCAAGAACGATGACGGACACAAGACTGAACAGCCTGACGAAGAGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CAA 90 bp CTGTTCTCCTGCATGGTAGGTACAGTGTCTTGGACTGCAGCCAGGTaGTGGAAATGGCCATTTTCTGCAAAAGACAGCAATTTATCCGAA +
Preference number: 6 (lower is better)
Translates to: LFSCMVGTVSWTAAR*WKWPFSAKDSNLSE
Trigger: TTCGGATAAATTGCTGTCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCATGCAGGAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS TCA 72 bp ACGCTCCCCTGTGTGGACTTTAATATGCTGGTACAGTaGATTCCGCTGGGCAAAAGTCCTGAAACATACTTC +
Preference number: 6 (lower is better)
Translates to: TLPCVDFNMLVQ*IPLGKSPETYF
Trigger: GAAGTATGTTTCAGGACTTTTGCCCAGCGGAATTCACTGTACCAGCATATTAAAGTCCACACAGGGGAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 72 bp CTTGAGTTCAGCTACCACACACGCAGACTAACAGGATaGGAACTGCTTGAAGCTCTTATTCCATGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: LEFSYHTRRLTG*ELLEALIPCCS
Trigger: TGAGCAACATGGAATAAGAGCTTCAAGCAGTTCCCATCCTGTTAGTCTGCGTGTGTGGTAGCTGAACTCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CAA 72 bp TCATGCATCTCATGCAGTAGGTTAAATGGGGAGGATTaGGATTCCAGCAGAACTGCACCGCTTTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: SCISCSRLNGED*DSSRTAPLSIF
Trigger: AAAGATGGAAAGCGGTGCAGTTCTGCTGGAATCCAAATCCTCCCCATTTAACCTACTGCATGAGATGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000424216.1
CDS CAA 90 bp TGGAAATGGCCATTTTCTGCAAAAGACAGCAATTTATCCGAAAGCTaGGATGACACATACTCTTCGTCAGGCTGTTCAGTCTTGTGTCCG +
Preference number: 6 (lower is better)
Translates to: WKWPFSAKDSNLSES*DDTYSSSGCSVLCP
Trigger: CGGACACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATTGCTGTCTTTTGCAGAAAATGGCCATTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CCA 72 bp ATGGTAGGTACAGTGTCTTGGACTGCAGCCAGGTTGTaGAAATGGCCATTTTCTGCAAAAGACAGCAATTTA +
Preference number: 6 (lower is better)
Translates to: MVGTVSWTAARL*KWPFSAKDSNL
Trigger: TAAATTGCTGTCTTTTGCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGACACTGTACCTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS CCA 72 bp TCGGATTCAACGTGTCTGATTTCTCAATCAACAAAGTaGGTTCTGAGCGCGATTTCCTATGTTGCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: SDSTCLISQSTK*VLSAISYVAWL
Trigger: TAGCCAAGCAACATAGGAAATCGCGCTCAGAACCCACTTTGTTGATTGAGAAATCAGACACGTTGAATCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424216.1
CDS TCA 72 bp TTCTGCAAAAGACAGCAATTTATCCGAAAGCTTGGATaGCACATACTCTTCGTCAGGCTGTTCAGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: FCKRQQFIRKLG*HILFVRLFSLV
Trigger: CACAAGACTGAACAGCCTGACGAAGAGTATGTGTCATCCAAGCTTTCGGATAAATTGCTGTCTTTTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338121.10
ENST00000377051.2
ENST00000477239.1
CDS GCA 72 bp GAGTATTCTTATCGTGTATCTGTGTGGACTTTAATATaGTGGTACAGTGAATTCCGCTGGGCAAAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: EYSYRVSVWTLI*WYSEFRWAKVL
Trigger: CAGGACTTTTGCCCAGCGGAATTCACTGTACCAGCATATTAAAGTCCACACAGATACACGATAAGAATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477239.1
CDS CAA 72 bp GGTTTAACTACCTCTTTCTTCTTGTCTAGTTTGTCCTaGGACTTCTTCGGTGGCAAATCTGAAGACATGCCA +
Preference number: 6 (lower is better)
Translates to: GLTTSFFLSSLS*DFFGGKSEDMP
Trigger: TGGCATGTCTTCAGATTTGCCACCGAAGAAGTCCAAGGACAAACTAGACAAGAAGAAAGAGGTAGTTAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2
CDS CCA 72 bp TATTCTTATCGTGTATCTGTGTGGACTTTAATATGCTaGTACAGTGAATTCCGCTGGGCAAAAGTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: YSYRVSVWTLIC*YSEFRWAKVLK
Trigger: TTTCAGGACTTTTGCCCAGCGGAATTCACTGTACCAGCATATTAAAGTCCACACAGATACACGATAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477239.1
CDS TCA 72 bp GACACCTTTTATGATAAATCAGCATGTGGTTCTGAGTaGATCTTGCACCACATTCATCACAGACAAAAGGTT +
Preference number: 6 (lower is better)
Translates to: DTFYDKSACGSE*ILHHIHHRQKV
Trigger: AACCTTTTGTCTGTGATGAATGTGGTGCAAGATTCACTCAGAACCACATGCTGATTTATCATAAAAGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338121.10
ENST00000377051.2