RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GYS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104812

Ensembl transcript IDs: ENST00000263276.6, ENST00000323798.8, ENST00000457974.1, ENST00000472004.5, ENST00000484289.2, ENST00000496048.1, ENST00000594220.1

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTaGTTATGCATATTCTGGAGCCAGAGAAAGGCACGGCTTTGTGGA +
Preference number: 1 (lower is better)
Translates to: PGLWEAVQAQGTPGR*LCIFWSQRKARLCG
Trigger: TCCACAAAGCCGTGCCTTTCTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTTCCCAGAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp GGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTaGGCGTGGCCTGCTCTGTATGCTGTAGAATTTGTAAGCCACACG +
Preference number: 1 (lower is better)
Translates to: GHHVVSRTWWPACRA*AWPALYAVEFVSHT
Trigger: CGTGTGGCTTACAAATTCTACAGCATACAGAGCAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp AGCCAAGTGGTTCTACCACCTCTTGCTTGGCCAAAGTGTAGGGGATaGCAGGAGCCGGATGGAGGGATCCTCCAGGCAGAGCCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: SQVVLPPLAWPKCRG*QEPDGGILQAEPGS
Trigger: AGAGCCAGGCTCTGCCTGGAGGATCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTAGAACCACTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp CCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACATaGGGGGCCCTCCCTTTCACCAAAGCTGAAGGCAGGGCACAGTTT +
Preference number: 1 (lower is better)
Translates to: PLNCKPSGADTAQHT*GALPFTKAEGRAQF
Trigger: AAACTGTGCCCTGCCTTCAGCTTTGGTGAAAGGGAGGGCCCCTCATGTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp GCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTaGTCGCCCCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGG +
Preference number: 1 (lower is better)
Translates to: ALSYLQTLKVPRLWT*SPHSQGHHVVSRTW
Trigger: CCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp GGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTaGAAGTGCCCCGGCTCTGGACTTGATCGCCCCATTCGCAGGGAC +
Preference number: 1 (lower is better)
Translates to: GVEMEDHLLSVTFKL*KCPGSGLDRPIRRD
Trigger: GTCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR GCA 90 bp ATCCCTCCCAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAC +
Preference number: 1 (lower is better)
Translates to: IPPRAPLLELKWRTI*SQLPSNSESAPALD
Trigger: GTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTGGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CCA 90 bp GCGCTGATTATGCATATTCTGGAGCCAGAGAAAGGCACGGCTTTGTaGATTCTGGAGTGCAGGAACTTGGAAACTGGAGCTGGAGGGGGT +
Preference number: 1 (lower is better)
Translates to: ALIMHILEPEKGTAL*ILECRNLETGAGGG
Trigger: ACCCCCTCCAGCTCCAGTTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTCTGGCTCCAGAATATGCATAATCAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 90 bp GGGATGGAAGAGCCTCGAGGTAAATGTGGGGGTTCTAGAACCCAGTaGCCTCAGTTCTGGATCATGGGAAAGGGATCAGTATGCAGTAAC +
Preference number: 1 (lower is better)
Translates to: GMEEPRGKCGGSRTQ*PQFWIMGKGSVCSN
Trigger: GTTACTGCATACTGATCCCTTTCCCATGATCCAGAACTGAGGTCACTGGGTTCTAGAACCCCCACATTTACCTCGAGGCTCTTCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCACTGGGTGGGGGCACTaGGGGGCCACACCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGTGWGH*GATPSA
Trigger: TGCACTGGGTGTGGCCCCGCAGTGCCCCCACCCAGT...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGGAGTGTTTGGCGGACTaGGTGGGGGCACTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRECLAD*VGALRG
Trigger: GCCCCGCAGTGCCCCCACCCAGTCCGCCAAACACTC...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGTGGAGCTGGAGGGGGTaGAGTGTTTGGCGGACTGGG +
Preference number: 2 (lower is better)
Translates to: TTWFPELGGPHAGPERGLWSWRG*SVWRTG
Trigger: CCCAGTCCGCCAAACACTCCACCCCCTCCAGCTCCA...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGTGGAGCTGGAGGGGGTaGAGTGTTTGGCGGACTGGG +
Preference number: 2 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRWSWRG*SVWRTG
Trigger: CCCAGTCCGCCAAACACTCCACCCCCTCCAGCTCCA...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CAA 90 bp GACTTGATCGCCCCATTCGCAGGGACACCACGTGGTTTCCAGAACTaGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCTCTGTATGC +
Preference number: 2 (lower is better)
Translates to: DLIAPFAGTPRGFQN*VARMPGLSVACSVC
Trigger: GCATACAGAGCAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR TCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCCCCGGCTCTGGACTTaGTCGCCCCATTCGCAGGGA +
Preference number: 2 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHPRLWT*SPHSQG
Trigger: TCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCACCCAGTGCAGATCTaGAGCGGGGGTTTAGGAGCA +
Preference number: 2 (lower is better)
Translates to: TTWFPELGGPHAGPERGLHPVQI*SGGLGA
Trigger: TGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR TCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCCCCGGCTCTGGACTTaGTCGCCCCATTCGCAGGGA +
Preference number: 2 (lower is better)
Translates to: QLGISQVRGGGRQPALSSPRLWT*SPHSQG
Trigger: TCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGGAGCAGCACCCCTCTaGATCCTCTCTCTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHGAAPL*ILSLEQ
Trigger: CTGCTCCAGAGAGAGGATGCAGAGGGGTGCTGCTCC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGGAGTGTTTGGCGGACTaGGTGGGGGCACTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGECLAD*VGALRG
Trigger: GCCCCGCAGTGCCCCCACCCAGTCCGCCAAACACTC...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCAGGAACTTGGAAACTaGAGCTGGAGGGGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGQELGN*SWRGWS
Trigger: ACTCCACCCCCTCCAGCTCCAGTTTCCAAGTTCCTG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGCGGGGCCACACCCAGTaGAGATCTGGAGCGGGGGTT +
Preference number: 2 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWRGHTQ*RSGAGV
Trigger: AACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCG...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCACTGGGTGGGGGCACTaGGGGGCCACACCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: CSQLPSNSESAPALDLIATGWGH*GATPSA
Trigger: TGCACTGGGTGTGGCCCCGCAGTGCCCCCACCCAGT...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCACCCAGTGCAGATCTaGAGCGGGGGTTTAGGAGCA +
Preference number: 2 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAHPVQI*SGGLGA
Trigger: TGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTGGAGCAGCACCCCTCTaGATCCTCTCTCTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: QLGISQVRGGGRQPALSSGAAPL*ILSLEQ
Trigger: CTGCTCCAGAGAGAGGATGCAGAGGGGTGCTGCTCC...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGTAATGGCAGATTCCTaGCCTCTGGGAAGCGGTCCA +
Preference number: 2 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHVMADS*PLGSGP
Trigger: TGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTAC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGTGGTTTCCAGAACTTaGTGGCCCGCATGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWVVSRT*WPACRA
Trigger: GGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCAC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCAGGGGGTGGAGTGTTTaGCGGACTGGGTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRGWSV*RTGWGH
Trigger: GTGCCCCCACCCAGTCCGCCAAACACTCCACCCCCT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACAGGAACTTGGAAACTaGAGCTGGAGGGGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGQELGN*SWRGWS
Trigger: ACTCCACCCCCTCCAGCTCCAGTTTCCAAGTTCCTG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGATGACAGGAGCCGGATaGAGGGATCCTCCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGMTGAG*RDPPGR
Trigger: TCTGCCTGGAGGATCCCTCCATCCGGCTCCTGTCAT...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR TCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTGTTACCTTCAAACTCTaGAAGTGCCCCGGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: QLGISQVRGGGRQPALSSVTFKL*KCPGSG
Trigger: TCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAAC...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGAGCCTGGCTCTGACATaGCAGGGAGGGCTAGAACAT +
Preference number: 2 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGSLALT*QGGLEH
Trigger: ATGTTCTAGCCCTCCCTGGCATGTCAGAGCCAGGCT...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCGGCTTTGTGGATTCTaGAGTGCAGGAACTTGGAAA +
Preference number: 2 (lower is better)
Translates to: KRSRPRGLQGADYAYSGARLCGF*SAGTWK
Trigger: TTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTaGATCGCCCCATTCGCAGGGACACCACGTGGTTTCCAGAACTTG +
Preference number: 2 (lower is better)
Translates to: CSQLPSNSESAPALD*IAPFAGTPRGFQNL
Trigger: CAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR TCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCGGGACTCCAGGGCGCTaGTTATGCATATTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: CSQLPSNSESAPALDLIAGTPGR*LCIFWS
Trigger: GCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCC...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGGCCTGAGCGTGGCCTaGTCTGTATGCTGTAGAATT +
Preference number: 2 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWGLSVA*SVCCRI
Trigger: AATTCTACAGCATACAGAGCAGGCCACGCTCAGGCC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCGCAGGGACACCACGTaGTTTCCAGAACTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRRDTT*FPELGG
Trigger: GCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CAA 90 bp AGGGCGCTGATTATGCATATTCTGGAGCCAGAGAAAGGCACGGCTTaGTGGATTCTGGAGTGCAGGAACTTGGAAACTGGAGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: RALIMHILEPEKGTA*WILECRNLETGAGG
Trigger: CCCTCCAGCTCCAGTTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTCTGGCTCCAGAATATGCATAATCAGCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHKWRTI*SQLPSN
Trigger: GTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTT...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACGGCTTTGTGGATTCTaGAGTGCAGGAACTTGGAAA +
Preference number: 2 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGRLCGF*SAGTWK
Trigger: TTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAAAGGCACGGCTTTGTaGATTCTGGAGTGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWKGTAL*ILECRN
Trigger: GTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTGTGGCCTGCTCTGTATaGTGTAGAATTTGTAAGCCA +
Preference number: 2 (lower is better)
Translates to: QLGISQVRGGGRQPALSSVACSV*CRICKP
Trigger: TGGCTTACAAATTCTACAGCATACAGAGCAGGCCAC...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGTAATGGCAGATTCCTaGCCTCTGGGAAGCGGTCCA +
Preference number: 2 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVVMADS*PLGSGP
Trigger: TGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTAC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGKWRTI*SQLPSN
Trigger: GTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGTGGCCTGCTCTGTATaGTGTAGAATTTGTAAGCCA +
Preference number: 2 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKVACSV*CRICKP
Trigger: TGGCTTACAAATTCTACAGCATACAGAGCAGGCCAC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CAA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGAGGGGGTGGAGTGTTaGGCGGACTGGGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: TTWFPELGGPHAGPERGLEGVEC*ADWVGA
Trigger: TGCCCCCACCCAGTCCGCCAAACACTCCACCCCCTC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR GCA 72 bp CAGATCTGGAGCGGGGGTTTAGGAGCAGCACCCCTCTaGATCCTCTCTCTGGAGCAGAGAGGCAGGACAGGC +
Preference number: 3 (lower is better)
Translates to: QIWSGGLGAAPL*ILSLEQRGRTG
Trigger: GCCTGTCCTGCCTCTCTGCTCCAGAGAGAGGATGCAGAGGGGTGCTGCTCCTAAACCCCCGCTCCAGATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CCA 72 bp TCTGGACTTGATCGCCCCATTCGCAGGGACACCACGTaGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCT +
Preference number: 3 (lower is better)
Translates to: SGLDRPIRRDTT*FPELGGPHAGP
Trigger: AGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CAA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCGTGGTTTCCAGAACTaGGTGGCCCGCATGCCGGGC +
Preference number: 3 (lower is better)
Translates to: QLGISQVRGGGRQPALSSRGFQN*VARMPG
Trigger: GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR GCA 72 bp AACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTaGTCTGTATGCTGTAGAATTTGTAAGCCACACGGG +
Preference number: 3 (lower is better)
Translates to: NLVARMPGLSVA*SVCCRICKPHG
Trigger: CCCGTGTGGCTTACAAATTCTACAGCATACAGAGCAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGAGGGGGTGGAGTGTTaGGCGGACTGGGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVEGVEC*ADWVGA
Trigger: TGCCCCCACCCAGTCCGCCAAACACTCCACCCCCTC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 72 bp GTTCTACCACCTCTTGCTTGGCCAAAGTGTAGGGGATaGCAGGAGCCGGATGGAGGGATCCTCCAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: VLPPLAWPKCRG*QEPDGGILQAE
Trigger: CTCTGCCTGGAGGATCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 72 bp TGCAAACCAAGCGGTGCAGACACAGCACAGCACACATaGGGGGCCCTCCCTTTCACCAAAGCTGAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: CKPSGADTAQHT*GALPFTKAEGR
Trigger: CCTGCCTTCAGCTTTGGTGAAAGGGAGGGCCCCTCATGTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CAA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAGAGAAAGGCACGGCTTaGTGGATTCTGGAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGEKGTA*WILECR
Trigger: CCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTC...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 72 bp TACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTaGTCGCCCCATTCGCAGGGACACCACGTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: YLQTLKVPRLWT*SPHSQGHHVVS
Trigger: GGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTTGGTTCTACCACCTCTaGCTTGGCCAAAGTGTAGGG +
Preference number: 3 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVWFYHL*LGQSVG
Trigger: CCCTACACTTTGGCCAAGCAAGAGGTGGTAGAACCA...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR TCA 72 bp GAGCCTCGAGGTAAATGTGGGGGTTCTAGAACCCAGTaGCCTCAGTTCTGGATCATGGGAAAGGGATCAGTA +
Preference number: 3 (lower is better)
Translates to: EPRGKCGGSRTQ*PQFWIMGKGSV
Trigger: TACTGATCCCTTTCCCATGATCCAGAACTGAGGTCACTGGGTTCTAGAACCCCCACATTTACCTCGAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR GCA 72 bp AGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCG +
Preference number: 3 (lower is better)
Translates to: RAPLLELKWRTI*SQLPSNSESAP
Trigger: CGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CCA 72 bp ATGCATATTCTGGAGCCAGAGAAAGGCACGGCTTTGTaGATTCTGGAGTGCAGGAACTTGGAAACTGGAGCT +
Preference number: 3 (lower is better)
Translates to: MHILEPEKGTAL*ILECRNLETGA
Trigger: AGCTCCAGTTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTCTGGCTCCAGAATATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCAGCGAGGGCGACGGTaGCACCGAGGCTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLQRGRR*HRGWPW
Trigger: CCACGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGCTCGCTCGGGGTGCTaGGTGAGCTGGAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLARSGC*VSWRWP
Trigger: CGGCCACCTCCAGCTCACTCAGCACCCCGAGCGAGC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCGCGCGGCCACTCTGGTaGACGGATGTTGCGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSARPLW*TDVAPV
Trigger: GACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGC...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCGGGCTGGAGTGTCGTaGCAGCGAGGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGRAGVS*QRGRRW
Trigger: CCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCCCCCGGCTCTGGACTTaGTCGCCCCATTCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSPRLWT*SPHSQG
Trigger: TCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGG...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGCGGTGGCACCGAGGCTaGCCGTGGGTAGCGGTACCC +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRRWHRG*PWVAVP
Trigger: GGGTACCGCTACCCACGGCCAGCCTCGGTGCCACCG...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CAA 72 bp GCCCCATTCGCAGGGACACCACGTGGTTTCCAGAACTaGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: APFAGTPRGFQN*VARMPGLSVAC
Trigger: GCAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGCAAGACCGCACCCCTaGCCCGAAGCGTTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGARPHP*PEALGP
Trigger: AGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCGGTGGTGAAGATGGTTaGTACAGGCAGTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSGGEDG*YRQSPG
Trigger: GCCCGGCGACTGCCTGTAGCAACCATCTTCACCACC...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCAGAGTTGCGCTTGCTaGCGCTGGTGGAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLQSCAC*RWWRRC
Trigger: GCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGCGGGGCCACACCCAGTaGAGATCTGGAGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRRGHTQ*RSGAGV
Trigger: AACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCG...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCACTCTGGTGCGGGCTaGAGTGTCGTGACAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLHSGAG*SVVTAR
Trigger: CCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGCTCGGGGTGCTGAGTaGGCTGGAGGTGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHARGAE*AGGGRV
Trigger: GACACGGCCACCTCCAGCTCACTCAGCACCCCGAGC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGTCGTCCTCACTCTGGTaGGGGCTGGAGTGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLSSSLW*GLECRD
Trigger: GTCACGACACTCCAGCCCGCACCAGAGTGAGGACGA...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACGCTGGTGGAGGAGGTaGAGGACGCTCGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGRWWRR*RTLGAA
Trigger: GGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGCAGAGTTGCGCTTGCTaGCGCTGGTGGAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRQSCAC*RWWRRC
Trigger: GCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTG...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCCACAGAGTTGCGCTTaGTGCCGCTGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGPQSCA*CRWWRR
Trigger: CCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCCTGCCCCGAAGCGTTaGGACCTAGGCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGPAPKR*DLGRRR
Trigger: CCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGCTCTGGAAAGGCCTTaGACAGCGCCATGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGALERP*TAPCGA
Trigger: CGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGAGGCGGGGAGTGTGGTaGGGCGGACTTAGTTACGCT +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLRRGVW*GGLSYA
Trigger: AGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCT...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGAGTGTTTGGCGGACTaGGTGGGGGCACTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAECLAD*VGALRG
Trigger: GCCCCGCAGTGCCCCCACCCAGTCCGCCAAACACTC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCCGCAGGGACACCACGTaGTTTCCAGAACTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSRRDTT*FPELGG
Trigger: GCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCG...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGAGAGGACAGCGTCGTTaGCCTCGCGGTCGTACCACG +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRRGQRR*PRGRTT
Trigger: CGTGGTACGACCGCGAGGCCAACGACGCTGTCCTCT...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCTCCAGTCCTGGCAGTaGGGACATGGACAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLLQSWQ*GHGQSA
Trigger: CGCACTTTGTCCATGTCCTCACTGCCAGGACTGGAG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGCGTGGCATGGGTGGTaGAGATGGTTGCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLAWHGW*RWLLQA
Trigger: TGCCTGTAGCAACCATCTTCACCACCCATGCCACGC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCGATGTGTTCCTCCATaGAGCAGCCGAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLRCVPP*SSRSRR
Trigger: TCTCCGGCTTCGGCTGCTTCATGGAGGAACACATCG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGACAGCACAGCACACATaGGGGGCCCTCCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRTAQHT*GALPFT
Trigger: GGTGAAAGGGAGGGCCCCTCATGTGTGCTGTGCTGT...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGCCCGACGGGAAGCTTaGAAGACGCTCGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGARREA*KTLGFL
Trigger: TAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCAGGAATCATCCAGGCTaGGGAACCGCCGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSRNHPG*GTAGQE
Trigger: TTCTTGACCGGCGGTTCCGCAGCCTGGATGATTCCT...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCAGCCTGGCTCTGACATaGCAGGGAGGGCTAGAACAT +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSSLALT*QGGLEH
Trigger: ATGTTCTAGCCCTCCCTGGCATGTCAGAGCCAGGCT...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCCCAGCAGCGTGGCATaGGTGGTGAAGATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLPSSVA*VVKMVA
Trigger: AGCAACCATCTTCACCACCCATGCCACGCTGCTGGG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCGATTCGGCGGATGGTaGTCAGGATGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGRFGGW*SGWGLR
Trigger: CCTCAGACCCCATCCTGACCACCATCCGCCGAATCG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCGTAGGTGAAGTGCTCTaGAAAGGCCTTGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSVGEVL*KGLGQR
Trigger: GCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTAC...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACACCGAGGCTGGCCGTaGGTAGCGGTACCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGHRGWP*VAVPLG
Trigger: GCCCAGGGGTACCGCTACCCACGGCCAGCCTCGGTG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCTGCGCTTGCTGCCGCTaGTGGAGGAGGTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGACACCR*WRRCRT
Trigger: CGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCA...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGGACAGGCGGGGAGTGTaGTGGGGCGGACTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRDRRGV*WGGLSY
Trigger: GTAACTAAGTCCGCCCCACCACACTCCCCGCCTGTC...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGGGGGTGGAGTGTTTaGCGGACTGGGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGARGWSV*RTGWGH
Trigger: GTGCCCCCACCCAGTCCGCCAAACACTCCACCCCCT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGCTCGCTCGGGGTGCTaGGTGAGCTGGAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWARSGC*VSWRWP
Trigger: CGGCCACCTCCAGCTCACTCAGCACCCCGAGCGAGC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGGAAGGCATCTGGACTaGGACTGTGTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLGRHLD*DCVSSR
Trigger: TCTGGAGGACACACAGTCTCAGTCCAGATGCCTTCC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCGCTCGGCTTCCTATTaGAAGACCGCACCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHRSASY*KTAPLP
Trigger: GGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTACTGGGTGGGGGCACTaGGGGGCCACACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSTGWGH*GATPSA
Trigger: TGCACTGGGTGTGGCCCCGCAGTGCCCCCACCCAGT...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCAATCACACCCCTCCTaGCCTCCCCTCTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGQSHPS*PPLSTA
Trigger: TGCAGTTGAGAGGGGAGGGCAGGAGGGGTGTGATTG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCCTGCCCCGAAGCGTTaGGACCTAGGCAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAPAPKR*DLGRRR
Trigger: CCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGGCCGATTCGGCGGATaGTGGTCAGGATGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAGRFGG*WSGWGL
Trigger: CAGACCCCATCCTGACCACCATCCGCCGAATCGGCC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTTCCGTGCGGTTCCGCTaGATGATACGCTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGSVRFR*MIRCRR
Trigger: CCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGA...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGCTCTGGAAAGGCCTTaGACAGCGCCATGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHALERP*TAPCGA
Trigger: CGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGCACCCAGTGCAGATCTaGAGCGGGGGTTTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRHPVQI*SGGLGA
Trigger: TGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTG...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCTGGAGCTGGAGGGGGTaGAGTGTTTGGCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAWSWRG*SVWRTG
Trigger: CCCAGTCCGCCAAACACTCCACCCCCTCCAGCTCCA...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGTAATGGCAGATTCCTaGCCTCTGGGAAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLVMADS*PLGSGP
Trigger: TGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTAC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCGCAGGGACACCACGTaGTTTCCAGAACTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGRRDTT*FPELGG
Trigger: GCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGTAGATACCGTAAGCTaGGGGGTCTGCGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLVDTVS*GVCDVF
Trigger: GAACACATCGCAGACCCCTCAGCTTACGGTATCTAC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTTGCGGTTCCGCTGGATaGTACGCTGCCGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSCGSAG*YAAAGS
Trigger: AGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCA...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCGGGCTGGAGTGTCGTaGCAGCGAGGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIARAGVS*QRGRRW
Trigger: CCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGTTACCTTCAAACTCTaGAAGTGCCCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLVTFKL*KCPGSG
Trigger: TCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAAC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAGCAAGACCGCACCCCTaGCCCGAAGCGTTGGGACCT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGARPHP*PEALGP
Trigger: AGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGC...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGCTGCCGCCCTTTCCATaGAGTATCGGTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLLPPFP*SIGGRS
Trigger: AGATCTACCACCGATACTGCATGGAAAGGGCGGCAG...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGTGAGCGCAGTGGGCTaGCGCCCTTTCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPEVSAVG*RPFHAV
Trigger: TACTGCATGGAAAGGGCGGCAGCCCACTGCGCTCAC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGTGAGCGCAGTGGGCTaGCGCCCTTTCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHVSAVG*RPFHAV
Trigger: TACTGCATGGAAAGGGCGGCAGCCCACTGCGCTCAC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCGCTGGTGGAGGAGGTaGAGGACGCTCGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKRWWRR*RTLGAA
Trigger: GGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACGGGGCCACACCCAGTaGAGATCTGGAGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGRGHTQ*RSGAGV
Trigger: AACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGCAAACCAAGCGGTaGAGACACAGCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGLQTKR*RHSTAH
Trigger: GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGGCGGGGCCGAGTAGCTaGTGCCCGACGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGAGPSS*CPTGSL
Trigger: CAAGCTTCCCGTCGGGCACCAGCTACTCGGCCCCGC...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTTCTTCAGGGCCGGGGTaGGGGCCTCCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSSSGPG*GPPAVP
Trigger: TGGAACTGCTGGAGGCCCCCACCCCGGCCCTGAAGA...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTGGCCGATTCGGCGGATaGTGGTCAGGATGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGGRFGG*WSGWGL
Trigger: CAGACCCCATCCTGACCACCATCCGCCGAATCGGCC...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTCGGCGCGGCCACTCTaGTGCACGGATGTTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGSARPL*CTDVAP
Trigger: CGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGGCGGGGAGTGTGGTaGGGCGGACTTAGTTACGCT +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGARRGVW*GGLSYA
Trigger: AGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTAGGGGGTGGAGTGTTTaGCGGACTGGGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSRGWSV*RTGWGH
Trigger: GTGCCCCCACCCAGTCCGCCAAACACTCCACCCCCT...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTTGGAGCTGGAGGGGGTaGAGTGTTTGGCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGWSWRG*SVWRTG
Trigger: CCCAGTCCGCCAAACACTCCACCCCCTCCAGCTCCA...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAACAGTAGTGAAGACGTaGGCGCAGTGGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGTVVKT*AQWAAA
Trigger: GGCGGCAGCCCACTGCGCTCACGTCTTCACTACTGT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGTGTCGGCACTGCTATTaGAGAGGCCGATTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPECRHCY*RGRFGG
Trigger: TCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACA...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTGCGGTTCCGCTGGATaGTACGCTGCCGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGCGSAG*YAAAGS
Trigger: AGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCTGGGTCCTCACGCCCTaGTCCGTGTACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAWVLTP*SVYGPT
Trigger: GGTGGGGCCGTACACGGAGCAGGGCGTGAGGACCCA...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCCGTGTCCACAGAGTTaGGCTTGCTGCCGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSPCPQS*ACCRWW
Trigger: CCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGGCCTGAGCGTGGCCTaGTCTGTATGCTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGGLSVA*SVCCRI
Trigger: AATTCTACAGCATACAGAGCAGGCCACGCTCAGGCC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCAATCACACCCCTCCTaGCCTCCCCTCTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHQSHPS*PPLSTA
Trigger: TGCAGTTGAGAGGGGAGGGCAGGAGGGGTGTGATTG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTCTTCAGGGCCGGGGTaGGGGCCTCCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGSSGPG*GPPAVP
Trigger: TGGAACTGCTGGAGGCCCCCACCCCGGCCCTGAAGA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCGGGGGTCACAATATCTaGTTTCCTCTTGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSGGHNI*FPLEQV
Trigger: CACTTGCTCAAGAGGAAACCAGATATTGTGACCCCC...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCGTCAGCACCCTTGTTaGAGAACTCATAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGARQHPC*RTHSGR
Trigger: CCGGCCGCTATGAGTTCTCCAACAAGGGTGCTGACG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCGTCAGCACCCTTGTTaGAGAACTCATAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHRQHPC*RTHSGR
Trigger: CCGGCCGCTATGAGTTCTCCAACAAGGGTGCTGACG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCACCGAGGCTGGCCGTaGGTAGCGGTACCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFHRGWP*VAVPLG
Trigger: GCCCAGGGGTACCGCTACCCACGGCCAGCCTCGGTG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCAGCGAGGGCGACGGTaGCACCGAGGCTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVQRGRR*HRGWPW
Trigger: CCACGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAGTGGTTTCCAGAACTTaGTGGCCCGCATGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGVVSRT*WPACRA
Trigger: GGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCAC...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCCTTCTGGAGTTGAAATaGAGGACCATCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GHCGATPSADLERGFRSSLLELK*RTICSQ
Trigger: CTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAG...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCGTTGGGCTCGTAGGTaGAGTGCTCTGGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGRWARR*SALERP
Trigger: AGGCCTTTCCAGAGCACTTCACCTACGAGCCCAACG...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGGGACTCCAGGGCGCTaGTTATGCATATTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPEGTPGR*LCIFWS
Trigger: GCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACCAAAGTGTAGGGGATaGCAGGAGCCGGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGPKCRG*QEPDGG
Trigger: CCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGGAAGGCATCTGGACTaGGACTGTGTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHGRHLD*DCVSSR
Trigger: TCTGGAGGACACACAGTCTCAGTCCAGATGCCTTCC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGGTTCTAGAACCCAGTaGCCTCAGTTCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGGSRTQ*PQFWIM
Trigger: CATGATCCAGAACTGAGGTCACTGGGTTCTAGAACC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCTCCAGGGCCCAAGCTaGGGCACCCACGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKLQGPS*GTHVQE
Trigger: CTCCTGGACGTGGGTGCCTCAGCTTGGGCCCTGGAG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR GCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGGCCGAGTAGCTGGTaGCCGACGGGAAGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGGPSSW*PTGSLQ
Trigger: TTGCAAGCTTCCCGTCGGGCACCAGCTACTCGGCCC...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCTGGGTCCTCACGCCCTaGTCCGTGTACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFWVLTP*SVYGPT
Trigger: GGTGGGGCCGTACACGGAGCAGGGCGTGAGGACCCA...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCTTGAGCAAGTGCTGTaGCTCGATGGCGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHLEQVL*LDGGDL
Trigger: CAGATCACCGCCATCGAGGCACAGCACTTGCTCAAG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTGTTGAGCCGAGCCAATaGCTCCAGGAAGACGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGVEPSQ*LQEDVS
Trigger: GCTGACGTCTTCCTGGAGGCATTGGCTCGGCTCAAC...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAAGGCAACCACTGTCTaGTCGCTGCCGTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAKATTV*SLPFTL
Trigger: CAGAGTGAACGGCAGCGAGCAGACAGTGGTTGCCTT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCTGGTGCACGGATGTTaGGCCGGTCCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIALVHGC*AGPWRP
Trigger: AGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGCCACAGAGTTGCGCTTaGTGCCGCTGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGPQSCA*CRWWRR
Trigger: CCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGG...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAGGAGCAGCACCCCTCTaGATCCTCTCTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGGAAPL*ILSLEQ
Trigger: CTGCTCCAGAGAGAGGATGCAGAGGGGTGCTGCTCC...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCACTGGGTGGGGGCACTaGGGGGCCACACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFTGWGH*GATPSA
Trigger: TGCACTGGGTGTGGCCCCGCAGTGCCCCCACCCAGT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACAGCCTGGCTCTGACATaGCAGGGAGGGCTAGAACAT +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHSLALT*QGGLEH
Trigger: ATGTTCTAGCCCTCCCTGGCATGTCAGAGCCAGGCT...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGGATGGTGGTCAGGATaGGGTCTGAGGAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPEGWWSG*GLRSHP
Trigger: TGGATGACTCCTCAGACCCCATCCTGACCACCATCC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCGGTGGCACCGAGGCTaGCCGTGGGTAGCGGTACCC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVRWHRG*PWVAVP
Trigger: GGGTACCGCTACCCACGGCCAGCCTCGGTGCCACCG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGATCCTCGTCCTCACTCTaGTGCGGGCTGGAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGSSSSL*CGLECR
Trigger: ACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGA...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGTGTTGCGCCGGTCCTTaGCGGCCTCCTCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWCCAGP*RPPRPH
Trigger: ATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACA...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCTCGGCGCGGCCACTCTaGTGCACGGATGTTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFSARPL*CTDVAP
Trigger: CGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGA...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCTGCGCTTGCTGCCGCTaGTGGAGGAGGTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIACACCR*WRRCRT
Trigger: CGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCA...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTGACAGGCGGGGAGTGTaGTGGGGCGGACTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSDRRGV*WGGLSY
Trigger: GTAACTAAGTCCGCCCCACCACACTCCCCGCCTGTC...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGAGTGTTTGGCGGACTaGGTGGGGGCACTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKECLAD*VGALRG
Trigger: GCCCCGCAGTGCCCCCACCCAGTCCGCCAAACACTC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGAGGAAGAGTAGGATCTaGTCCAGAAAGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TTWFPELGGPHAGPERGLRKSRI*SRKGQK
Trigger: TTTCTGGCCCTTTCTGGACCAGATCCTACTCTTCCT...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTAGGCAGGGCACAGTTTaGGGATGGAAGAGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGRQGTV*GWKSLE
Trigger: CTCGAGGCTCTTCCATCCCCAAACTGTGCCCTGCCT...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCACAGTAGTGAAGACGTaGGCGCAGTGGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIATVVKT*AQWAAA
Trigger: GGCGGCAGCCCACTGCGCTCACGTCTTCACTACTGT...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCGATGTGTTCCTCCATaGAGCAGCCGAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSRCVPP*SSRSRR
Trigger: TCTCCGGCTTCGGCTGCTTCATGGAGGAACACATCG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGCTCGGGGTGCTGAGTaGGCTGGAGGTGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVARGAE*AGGGRV
Trigger: GACACGGCCACCTCCAGCTCACTCAGCACCCCGAGC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGCCAAAGTGTAGGGGATaGCAGGAGCCGGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWPKCRG*QEPDGG
Trigger: CCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGG...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGACAGCACAGCACACATaGGGGGCCCTCCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGTAQHT*GALPFT
Trigger: GGTGAAAGGGAGGGCCCCTCATGTGTGCTGTGCTGT...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGTCGTCCTCACTCTGGTaGGGGCTGGAGTGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWSSSLW*GLECRD
Trigger: GTCACGACACTCCAGCCCGCACCAGAGTGAGGACGA...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCTGGTGCACGGATGTTaGGCCGGTCCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFLVHGC*AGPWRP
Trigger: AGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGCCCGAAATACACCTTaGAGCCCTTGCTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAARNTP*SPCCSW
Trigger: CCATGAACAGCAAGGGCTGCAAGGTGTATTTCGGGC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGCGGGGCCGAGTAGCTaGTGCCCGACGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVAGPSS*CPTGSL
Trigger: CAAGCTTCCCGTCGGGCACCAGCTACTCGGCCCCGC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGGGGGTCACAATATCTaGTTTCCTCTTGAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGGGHNI*FPLEQV
Trigger: CACTTGCTCAAGAGGAAACCAGATATTGTGACCCCC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGAGAGGAACTCCGGGTaGAAAATCACCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAERNSG*KITFTL
Trigger: CAGGGTGAAGGTGATTTTCCACCCGGAGTTCCTCTC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGTCCGTGCGGTTCCGCTaGATGATACGCTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKSVRFR*MIRCRR
Trigger: CCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGA...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCGTGGTTTCCAGAACTTaGTGGCCCGCATGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAVVSRT*WPACRA
Trigger: GGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCAC...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTAGTGGTTTCACAGTaGGCAGAGCAGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGLVVSQ*AEQLGI
Trigger: TATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACAACCACTCATGGAAGTaGGCAACCACATGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHNHSWK*ATTCGF
Trigger: GAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTT...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGAGGTCTTGTCCAAGTTaGAGTCCAGATGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRRSCPS*SPDAHK
Trigger: TTTATGGGCATCTGGACTTCAACTTGGACAAGACCT...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGTGTCGGCACTGCTATTaGAGAGGCCGATTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWCRHCY*RGRFGG
Trigger: TCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACA...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTGTTACCTTCAAACTCTaGAAGTGCCCCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGVTFKL*KCPGSG
Trigger: TCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAAC...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACCCTTTCACCAAAGCTaGAGGCAGGGCACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGPFHQS*RQGTVW
Trigger: CCAAACTGTGCCCTGCCTTCAGCTTTGGTGAAAGGG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCGCTCGGCTTCCTATTaGAAGACCGCACCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRSASY*KTAPLP
Trigger: GGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGGGCCGAGTAGCTGGTaGCCGACGGGAAGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKGPSSW*PTGSLQ
Trigger: TTGCAAGCTTCCCGTCGGGCACCAGCTACTCGGCCC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGGAACTTGCAGCCCTTaGTGTTCATGGAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPEGTCSP*CSWNPV
Trigger: CACTGGATTCCATGAACAGCAAGGGCTGCAAGTTCC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAGCAGAGTCCAACGCCTaGCAACCACTCATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGAESNA*QPLMEV
Trigger: CACTTCCATGAGTGGTTGGCAGGCGTTGGACTCTGC...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCGGTGGTGAAGATGGTTaGTACAGGCAGTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAGGEDG*YRQSPG
Trigger: GCCCGGCGACTGCCTGTAGCAACCATCTTCACCACC...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACTTGAGCAAGTGCTGTaGCTCGATGGCGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGLEQVL*LDGGDL
Trigger: CAGATCACCGCCATCGAGGCACAGCACTTGCTCAAG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGATTCCTCTTGAGCAAGTaGTGTGCCTCGATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGFLLSK*CASMAV
Trigger: CACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAA...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGAGACTGCCGCTGCGTTaGAAAGATGGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPERLPLR*KDGSLH
Trigger: ATGAAGAGAGCCATCTTTGCAACGCAGCGGCAGTCT...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTAGGAATCATCCAGGCTaGGGAACCGCCGGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSRNHPG*GTAGQE
Trigger: TTCTTGACCGGCGGTTCCGCAGCCTGGATGATTCCT...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGGTGGCCTGCTCTGTATaGTGTAGAATTTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRVACSV*CRICKP
Trigger: TGGCTTACAAATTCTACAGCATACAGAGCAGGCCAC...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACTGCAAACCAAGCGGTaGAGACACAGCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGLQTKR*RHSTAH
Trigger: GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGCCCTCCCCTCTCAACTaGAAACCAAGCGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWPSPLN*KPSGAD
Trigger: GTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGG...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCTTCTCCTCACTCTGTaGCAGGAACTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGLLLTL*QELTQE
Trigger: TTCCTGGGTGAGTTCCTGGCACAGAGTGAGGAGAAG...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCGATTCGGCGGATGGTaGTCAGGATGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIARFGGW*SGWGLR
Trigger: CCTCAGACCCCATCCTGACCACCATCCGCCGAATCG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGTGTTGCGCCGGTCCTTaGCGGCCTCCTCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKCCAGP*RPPRPH
Trigger: ATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACA...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGCACCCAGTGCAGATCTaGAGCGGGGGTTTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGHPVQI*SGGLGA
Trigger: TGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTG...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCAGGAACTTGGAAACTaGAGCTGGAGGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSQELGN*SWRGWS
Trigger: ACTCCACCCCCTCCAGCTCCAGTTTCCAAGTTCCTG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACAAAGGCACGGCTTTGTaGATTCTGGAGTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHKGTAL*ILECRN
Trigger: GTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTT...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGATGACAGGAGCCGGATaGAGGGATCCTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWMTGAG*RDPPGR
Trigger: TCTGCCTGGAGGATCCCTCCATCCGGCTCCTGTCAT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGTGCAGGCGGATTCCCTaGAGGGAGATCTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPECRRIP*REISDL
Trigger: TAAATCTGAGATCTCCCTCCAGGGAATCCGCCTGCA...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGGCACAGTTTGGGGATaGAAGAGCCTCGAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPEGTVWG*KSLEVN
Trigger: ATTTACCTCGAGGCTCTTCCATCCCCAAACTGTGCC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCACTTCGAAGAGCACTaGGTTCTCCAGGTCGAATTC +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGHFEEH*VLQVEF
Trigger: GAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTG...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCTTCTCCTCACTCTGTaGCAGGAACTTGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSLLLTL*QELAAL
Trigger: AAGGGCTGCAAGTTCCTGGCACAGAGTGAGGAGAAG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS-3UTR GCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTTCCTCTTGAGCAAGTaGTGTGCCTCGATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGFLLSK*CASMAV
Trigger: CACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGACCTGGATTCGAGCCTTaGTCTGAGCATGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGPGFEP*SEHGGS
Trigger: AGAACCTCCATGCTCAGAGCAAGGCTCGAATCCAGG...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAAGGCAACCACTGTCTaGTCGCTGCCGTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWKATTV*SLPFTL
Trigger: CAGAGTGAACGGCAGCGAGCAGACAGTGGTTGCCTT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCCGTGTCCACAGAGTTaGGCTTGCTGCCGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVPCPQS*ACCRWW
Trigger: CCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCCCAGCAGCGTGGCATaGGTGGTGAAGATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAPSSVA*VVKMVA
Trigger: AGCAACCATCTTCACCACCCATGCCACGCTGCTGGG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGGTAGGTGAAGTGCTCTaGAAAGGCCTTGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGVGEVL*KGLGQR
Trigger: GCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTAC...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCACTCTGGTGCGGGCTaGAGTGTCGTGACAGCGAGG +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVHSGAG*SVVTAR
Trigger: CCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACCGGCTTTGTGGATTCTaGAGTGCAGGAACTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHRLCGF*SAGTWK
Trigger: TTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCG...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTAGACAGGAAGGCATCTaGACTGAGACTGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGRQEGI*TETVCP
Trigger: AGGACACACAGTCTCAGTCCAGATGCCTTCCTGTCT...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCAGGCAGGGCACAGTTTaGGGATGGAAGAGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIARQGTV*GWKSLE
Trigger: CTCGAGGCTCTTCCATCCCCAAACTGTGCCCTGCCT...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
3UTR CAA 72 bp TTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTaGATCGCCCCATTCGCAGGGACACCACGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LPSNSESAPALD*IAPFAGTPRGF
Trigger: GAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCTCCAGTCCTGGCAGTaGGGACATGGACAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKLQSWQ*GHGQSA
Trigger: CGCACTTTGTCCATGTCCTCACTGCCAGGACTGGAG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAAACCACTCATGGAAGTaGGCAACCACATGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGNHSWK*ATTCGF
Trigger: GAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGATTCGAGCCTTGCTCTaGGCATGGAGGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGIRALL*AWRFWN
Trigger: GTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGAAT...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGGGAAGACTCCAAGGTaGCAGCCACGGACAAACTCC +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKGKTPR*QPRTNS
Trigger: GGAGTTTGTCCGTGGCTGTCACCTTGGAGTCTTCCC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGTAGATACCGTAAGCTaGGGGGTCTGCGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWVDTVS*GVCDVF
Trigger: GAACACATCGCAGACCCCTCAGCTTACGGTATCTAC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCGTTGGGCTCGTAGGTaGAGTGCTCTGGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRWARR*SALERP
Trigger: AGGCCTTTCCAGAGCACTTCACCTACGAGCCCAACG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCCCTTTCACCAAAGCTaGAGGCAGGGCACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAPFHQS*RQGTVW
Trigger: CCAAACTGTGCCCTGCCTTCAGCTTTGGTGAAAGGG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTAGGACATGGACAAAGTaGGGTTTAAAGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGRTWTK*GLKAWL
Trigger: CAGCCATGCCTTTAAACCGCACTTTGTCCATGTCCT...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGATCTGCCTCTCCCCTaGTTCCTTGTCCACGTTGAA +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWDLPLP*FLVHVE
Trigger: TTCAACGTGGACAAGGAAGCAGGGGAGAGGCAGATC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAAGACTGCCGCTGCGTTaGAAAGATGGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGRLPLR*KDGSLH
Trigger: ATGAAGAGAGCCATCTTTGCAACGCAGCGGCAGTCT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGTGGCCTGCTCTGTATaGTGTAGAATTTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAVACSV*CRICKP
Trigger: TGGCTTACAAATTCTACAGCATACAGAGCAGGCCAC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCGGAAAGGGATCAGTATaGAGTAACGTGGTAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAGKGSV*SNVVRF
Trigger: GAACCTTACCACGTTACTGCATACTGATCCCTTTCC...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCCTCCCCTCTCAACTaGAAACCAAGCGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKPSPLN*KPSGAD
Trigger: GTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGTCTGGAACTCATGCATaGCAGAAAACTTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRSGTHA*QKTSSH
Trigger: ATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGA...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAATTGTTGGTCCGCGCTaGCATGATGAAGAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGIVGPR*HDEEGN
Trigger: GTTGCCTTCTTCATCATGCCAGCGCGGACCAACAAT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCAGGAACTTGGAAACTaGAGCTGGAGGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIAQELGN*SWRGWS
Trigger: ACTCCACCCCCTCCAGCTCCAGTTTCCAAGTTCCTG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCATGACAGGAGCCGGATaGAGGGATCCTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFMTGAG*RDPPGR
Trigger: TCTGCCTGGAGGATCCCTCCATCCGGCTCCTGTCAT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTTGCAGGCGGATTCCCTaGAGGGAGATCTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSCRRIP*REISDL
Trigger: TAAATCTGAGATCTCCCTCCAGGGAATCCGCCTGCA...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGCTCAGTTCTGGATCATaGGAAAGGGATCAGTATGCA +
Preference number: 4 (lower is better)
Translates to: GPGPGDSRALIMHILEPELSSGS*ERDQYA
Trigger: TGCATACTGATCCCTTTCCCATGATCCAGAACTGAG...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAAGACTCCAAGGTaGCAGCCACGGACAAACTCC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVGKTPR*QPRTNS
Trigger: GGAGTTTGTCCGTGGCTGTCACCTTGGAGTCTTCCC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGTTGAGCCGAGCCAATaGCTCCAGGAAGACGTCAGC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVVEPSQ*LQEDVS
Trigger: GCTGACGTCTTCCTGGAGGCATTGGCTCGGCTCAAC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAKWRTI*SQLPSN
Trigger: GTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCACGGCACTCCGATGTTaGAGGTATCCCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFTALRC*RYPRAL
Trigger: GAGAGCTCTGGGATACCTGCAACATCGGAGTGCCGT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CCA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCTCGATGGCGGTGATCTaGGACACAGTAGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: CSQLPSNSESAPALDLIASMAVI*DTVVKT
Trigger: CGTCTTCACTACTGTGTCCCAGATCACCGCCATCGA...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGATTGTTGGTCCGCGCTaGCATGATGAAGAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGIVGPR*HDEEGN
Trigger: GTTGCCTTCTTCATCATGCCAGCGCGGACCAACAAT...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTTTCCTTCACCGTGTTaGCCGTGTCCCAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGFPSPC*PCPKAV
Trigger: AACAGCTTTGGGACACGGCCAACACGGTGAAGGAAA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGGATGGTGGTCAGGATaGGGTCTGAGGAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFGWWSG*GLRSHP
Trigger: TGGATGACTCCTCAGACCCCATCCTGACCACCATCC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTCGGCTTTGTGGATTCTaGAGTGCAGGAACTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QLGISQVRGGGRQPALSSRLCGF*SAGTWK
Trigger: TTTCCAAGTTCCTGCACTCCAGAATCCACAAAGCCG...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGTAATGGCAGATTCCTaGCCTCTGGGAAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFVMADS*PLGSGP
Trigger: TGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTAC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAGGACATGGACAAAGTaGGGTTTAAAGGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWRTWTK*GLKAWL
Trigger: CAGCCATGCCTTTAAACCGCACTTTGTCCATGTCCT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGATCTGCCTCTCCCCTaGTTCCTTGTCCACGTTGAA +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKDLPLP*FLVHVE
Trigger: TTCAACGTGGACAAGGAAGCAGGGGAGAGGCAGATC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCTGGATTCGAGCCTTaGTCTGAGCATGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKPGFEP*SEHGGS
Trigger: AGAACCTCCATGCTCAGAGCAAGGCTCGAATCCAGG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGGCCTGAGCGTGGCCTaGTCTGTATGCTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFGLSVA*SVCCRI
Trigger: AATTCTACAGCATACAGAGCAGGCCACGCTCAGGCC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGCTGGCAGTGAGGACATaGACAAAGTGCGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWLAVRT*TKCGLK
Trigger: CTTTAAACCGCACTTTGTCCATGTCCTCACTGCCAG...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGTCGATGGCGGTGATCTaGGACACAGTAGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKSMAVI*DTVVKT
Trigger: CGTCTTCACTACTGTGTCCCAGATCACCGCCATCGA...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGATCACATTCAGCCCATTaGGGGTCACAATATCTGGTT +
Preference number: 4 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGSHSAH*GSQYLV
Trigger: AACCAGATATTGTGACCCCCAATGGGCTGAATGTGA...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCTCTGGAACTCATGCATaGCAGAAAACTTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: KRSRPRGLQGADYAYSGASGTHA*QKTSSH
Trigger: ATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGA...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAGGAAGAGTAGGATCTaGTCCAGAAAGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWRKSRI*SRKGQK
Trigger: TTTCTGGCCCTTTCTGGACCAGATCCTACTCTTCCT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGGTTCTAGAACCCAGTaGCCTCAGTTCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFGSRTQ*PQFWIM
Trigger: CATGATCCAGAACTGAGGTCACTGGGTTCTAGAACC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTCACATTCAGCCCATTaGGGGTCACAATATCTGGTT +
Preference number: 4 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGSHSAH*GSQYLV
Trigger: AACCAGATATTGTGACCCCCAATGGGCTGAATGTGA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGAGACAGGAAGGCATCTaGACTGAGACTGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKRQEGI*TETVCP
Trigger: AGGACACACAGTCTCAGTCCAGATGCCTTCCTGTCT...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGGCACAGTTTGGGGATaGAAGAGCCTCGAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFGTVWG*KSLEVN
Trigger: ATTTACCTCGAGGCTCTTCCATCCCCAAACTGTGCC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCACTTCGAAGAGCACTaGGTTCTCCAGGTCGAATTC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVHFEEH*VLQVEF
Trigger: GAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGAAATGGAGGACCATCTaGTCTCAGTTACCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWKWRTI*SQLPSN
Trigger: GTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTAAAGGCACGGCTTTGTaGATTCTGGAGTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVKGTAL*ILECRN
Trigger: GTTCCTGCACTCCAGAATCCACAAAGCCGTGCCTTT...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCTTCTGGAGTTGAAATaGAGGACCATCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKLLELK*RTICSQ
Trigger: CTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCCTAGTGGTTTCACAGTaGGCAGAGCAGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFLVVSQ*AEQLGI
Trigger: TATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR TCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCAGGTCTTGTCCAAGTTaGAGTCCAGATGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRSCPS*SPDAHK
Trigger: TTTATGGGCATCTGGACTTCAACTTGGACAAGACCT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR GCA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGGAAAGGGATCAGTATaGAGTAACGTGGTAAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFGKGSV*SNVVRF
Trigger: GAACCTTACCACGTTACTGCATACTGATCCCTTTCC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CCA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCTCAGTTCTGGATCATaGGAAAGGGATCAGTATGCA +
Preference number: 4 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVLSSGS*ERDQYA
Trigger: TGCATACTGATCCCTTTCCCATGATCCAGAACTGAG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp GCGGCCCGTTCCGGGGATCCTCCTCGTCCTCACTCTGGTGCGGGCTaGAGTGTCGTGACAGCGAGGGCGACGGTGGCACCGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AARSGDPPRPHSGAG*SVVTARATVAPRLA
Trigger: GGCCAGCCTCGGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp CCGGGGATCCTCCTCGTCCTCACTCTGGTGCGGGCTGGAGTGTCGTaGCAGCGAGGGCGACGGTGGCACCGAGGCTGGCCGTGGGTAGCG +
Preference number: 5 (lower is better)
Translates to: PGILLVLTLVRAGVS*QRGRRWHRGWPWVA
Trigger: CGCTACCCACGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp GCCGCTGGTGGAGGAGGTGCAGGACGCTCGGCGCGGCCACTCTGGTaGACGGATGTTGCGCCGGTCCTTGGCGGCCTCCTCGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: AAGGGGAGRSARPLW*TDVAPVLGGLLVLI
Trigger: GATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp TCCTCCAGCGGCCCGTTCCGGGGATCCTCCTCGTCCTCACTCTGGTaGGGGCTGGAGTGTCGTGACAGCGAGGGCGACGGTGGCACCGAG +
Preference number: 5 (lower is better)
Translates to: SSSGPFRGSSSSSLW*GLECRDSEGDGGTE
Trigger: CTCGGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGCTGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp AGGAGGTGCAGGACGCTCGGCGCGGCCACTCTGGTGCACGGATGTTaGGCCGGTCCTTGGCGGCCTCCTCGTCCTCATCGTAGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: RRCRTLGAATLVHGC*AGPWRPPRPHRSAR
Trigger: GCGAGCGCTACGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCT
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp TGGCCGTGTCCACAGAGTTGCGCTTGCTGCCGCTGGTGGAGGAGGTaGAGGACGCTCGGCGCGGCCACTCTGGTGCACGGATGTTGCGCC +
Preference number: 5 (lower is better)
Translates to: WPCPQSCACCRWWRR*RTLGAATLVHGCCA
Trigger: GGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp TCTTCCTCCAGCGGCCCGTTCCGGGGATCCTCCTCGTCCTCACTCTaGTGCGGGCTGGAGTGTCGTGACAGCGAGGGCGACGGTGGCACC +
Preference number: 5 (lower is better)
Translates to: SSSSGPFRGSSSSSL*CGLECRDSEGDGGT
Trigger: GGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGCTGGAGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp GTGAGCTGGAGGTGGCCGTGTCCACAGAGTTGCGCTTGCTGCCGCTaGTGGAGGAGGTGCAGGACGCTCGGCGCGGCCACTCTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: VSWRWPCPQSCACCR*WRRCRTLGAATLVH
Trigger: GTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCTCAC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGGCCCCGGCTCTGGACTaGATCGCCCCATTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: TTWFPELGGPHAGPERGLAPALD*IAPFAG
Trigger: CCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGC...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp CGGCACCGGCACACAGGTAGCGCCCCAGCAGCGTGGCATGGGTGGTaGAGATGGTTGCTACAGGCAGTCGCCGGGCACGACACAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RHRHTGSAPAAWHGW*RWLLQAVAGHDTGR
Trigger: TCTGCCTGTGTCGTGCCCGGCGACTGCCTGTAGCAACCATCTTCACCACCCATGCCACGCTGCTGGGGCGCTACCTGTGTGCCGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp GCAGGTATCCCAGAGCTCTCCCTTCCAGCGCTCCAGGGCCCAAGCTaGGGCACCCACGTCCAGGAGCACCACCAGAGGGCCTCCCTCGAT +
Preference number: 5 (lower is better)
Translates to: AGIPELSLPALQGPS*GTHVQEHHQRASLD
Trigger: ATCGAGGGAGGCCCTCTGGTGGTGCTCCTGGACGTGGGTGCCTCAGCTTGGGCCCTGGAGCGCTGGAAGGGAGAGCTCTGGGATACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS GCA 90 bp ATTCGTCCCCTGTCACCTTCGCCTTCGTCTGCAGCACCGTGTAGATaGCACCCACTGTGGGCCCAAGCGTGTGAGGGCAGGCCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: IRPLSPSPSSAAPCR*HPLWAQACEGRPRP
Trigger: CGGCCGGGGCCTGCCCTCACACGCTTGGGCCCACAGTGGGTGGCATCTACACGGTGCTGCAGACGAAGGCGAAGGTGACAGGGGACGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457974.1
CDS CCA 90 bp CATCCTCTCTCTGGAGCAGAGAGGCAGGACAGGCGGGGAGTGTGGTaGGGCGGACTTAGTTACGCTCCTCGCCCAGGGAGCTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: HPLSGAERQDRRGVW*GGLSYAPRPGSWWG
Trigger: GCCCCACCAGCTCCCTGGGCGAGGAGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCTGTCCTGCCTCTCTGCTCCAGAGAGAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCTGCTCTGGAAAGGCCTaGGACAGCGCCATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: GHCGATPSADLERGFRSSCSGKA*DSAMWR
Trigger: GCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCA...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp GGACAGCGTCGTTGGCCTCGCGGTCGTACCACGGCACTCCGATGTTaGAGGTATCCCAGAGCTCTCCCTTCCAGCGCTCCAGGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GQRRWPRGRTTALRC*RYPRALPSSAPGPK
Trigger: CTTGGGCCCTGGAGCGCTGGAAGGGAGAGCTCTGGGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS CCA 90 bp CTGCATCCTCTCTCTGGAGCAGAGAGGCAGGACAGGCGGGGAGTGTaGTGGGGCGGACTTAGTTACGCTCCTCGCCCAGGGAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LHPLSGAERQDRRGV*WGGLSYAPRPGSWW
Trigger: CCACCAGCTCCCTGGGCGAGGAGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCTGTCCTGCCTCTCTGCTCCAGAGAGAGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp ACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCCTGAGCGTGGCCTGTGCCCGACGGGAAGCTaGCAAGACGCTCGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TTWFPELGGPHAGPERGLCPTGS*QDARLP
Trigger: AGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGCA...CAGGCCACGCTCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGCGTGGTTTCCAGAACTaGGTGGCCCGCATGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRRGFQN*VARMPG
Trigger: GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACG...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp TCACCTTCGCCTTCGTCTGCAGCACCGTGTAGATGCCACCCACTGTaGGCCCAAGCGTGTGAGGGCAGGCCCCGGCCGAGGTCCATAGTT +
Preference number: 5 (lower is better)
Translates to: SPSPSSAAPCRCHPL*AQACEGRPRPRSIV
Trigger: AACTATGGACCTCGGCCGGGGCCTGCCCTCACACGCTTGGGCCCACAGTGGGTGGCATCTACACGGTGCTGCAGACGAAGGCGAAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457974.1
CDS-3UTR CAA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCACGCTCGGCTTCCTATaGCAAGACCGCACCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGTLGFL*QDRTPA
Trigger: GGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGT...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCTCCACAGAGTTGCGCTaGCTGCCGCTGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGSTELR*LPLVEE
Trigger: CTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGA...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGGAGGGGGTGGAGTGTTaGGCGGACTGGGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GPGPGDSRALIMHILEPEEGVEC*ADWVGA
Trigger: TGCCCCCACCCAGTCCGCCAAACACTCCACCCCCTC...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACGCCCCGGCTCTGGACTaGATCGCCCCATTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHAPALD*IAPFAG
Trigger: CCCTGCGAATGGGGCGATCAAGTCCAGAGCCGGGGC...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp GGAAGCTTGCAAGACGCTCGGCTTCCTATTGCAAGACCGCACCCCTaGCCCGAAGCGTTGGGACCTAGGCAGAAGGAGGCCGCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: GSLQDARLPIARPHP*PEALGPRQKEAAAS
Trigger: TGACGCTGCGGCCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGCCCTGCCCCGAAGCGTaGGGACCTAGGCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GPGPGDSRALIMHILEPEPCPEA*GPRQKE
Trigger: CTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGG...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCCTCTGTGCCAGGAACTaGCAGCCCTTGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: GHCGATPSADLERGFRSSLCARN*QPLLFM
Trigger: CATGAACAGCAAGGGCTGCAAGTTCCTGGCACAGAG...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS-3UTR CAA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCATGTTGCGCCGGTCCTaGGCGGCCTCCTCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAMLRRS*AASSSS
Trigger: TGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACAT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp TCCAGTCCAGAAGGTCGGAGAGGCGCTCCGTGCGGTTCCGCTGGATaGTACGCTGCCGCCGGCTCTGCTGACAGAAACTGTAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSPEGRRGAPCGSAG*YAAAGSADRNCRGR
Trigger: CCTTCCTCTACAGTTTCTGTCAGCAGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGAGCGCCTCTCCGACCTTCTGGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000594220.1
CDS CCA 90 bp CCCCTGGGCCGCATCCGCCTCGTTGGGCTCGTAGGTGAAGTGCTCTaGAAAGGCCTTGGACAGCGCCATGTGGCGCGCAGACATATAGTA +
Preference number: 5 (lower is better)
Translates to: PLGRIRLVGLVGEVL*KGLGQRHVARRHIV
Trigger: TACTATATGTCTGCGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTACGAGCCCAACGAGGCGGATGCGGCCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTATGTTGCGCCGGTCCTaGGCGGCCTCCTCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGMLRRS*AASSSS
Trigger: TGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACAT...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGATCTGGTGCACGGATGTaGCGCCGGTCCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGSGARM*RRSLAA
Trigger: GGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGA...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp CACCCAGGAACCAGGTGGTCAGAAAGCCAAAGAGGACAGCGTCGTTaGCCTCGCGGTCGTACCACGGCACTCCGATGTTGCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: HPGTRWSESQRGQRR*PRGRTTALRCCRYP
Trigger: GGGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCCTCTTTGGCTTTCTGACCACCTGGTTCCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS-3UTR CAA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGCTGTCGGCACTGCTATaGAAGAGGCCGATTCGGCGG +
Preference number: 5 (lower is better)
Translates to: GPGPGDSRALIMHILEPELSALL*KRPIRR
Trigger: CCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAG...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp GCCACCCACCTTGTTAGCCACCTCCCAGGCCACTTCGAAGAGCACTaGGTTCTCCAGGTCGAATTCATCCTCCCAGTCCTCCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ATHLVSHLPGHFEEH*VLQVEFILPVLQSW
Trigger: CCAGGACTGGAGGACTGGGAGGATGAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTGGCCTGGGAGGTGGCTAACAAGGTGGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp TGCTACAGGCAGTCGCCGGGCACGACACAGGCAGAGTCCAACGCCTaGCAACCACTCATGGAAGTGAGCAACCACATGTGGCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: CYRQSPGTTQAESNA*QPLMEVSNHMWLLL
Trigger: GAGGAGAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGCCCGGCGACTGCCTGTAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp TCTGGGGCCCTTGTTAGCCACCTCCCAGGCCACTTCGAAGAGCACTaGGTTCTCCAGGTCGAATTCATCCTCCCAGTCCTCCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SGALVSHLPGHFEEH*VLQVEFILPVLQSW
Trigger: CCAGGACTGGAGGACTGGGAGGATGAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTGGCCTGGGAGGTGGCTAACAAGGGCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457974.1
CDS-3UTR CAA 90 bp GGGCACTGCGGGGCCACACCCAGTGCAGATCTGGAGCGGGGGTTTAGGAGCAGCTTCACATTCAGCCCATaGGGGGTCACAATATCTGGT +
Preference number: 5 (lower is better)
Translates to: GHCGATPSADLERGFRSSFTFSP*GVTISG
Trigger: ACCAGATATTGTGACCCCCAATGGGCTGAATGTGAA...GCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGTGTGGCCCCGCAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGCCGTGTCCACAGAGTaGCGCTTGCTGCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWAVSTE*RLLPLV
Trigger: CACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp GGAACTCCGGGTGGAAAATCACCTTCACCCTGTCGGCACTGCTATTaGAGAGGCCGATTCGGCGGATGGTGGTCAGGATGGGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GTPGGKSPSPCRHCY*RGRFGGWWSGWGLR
Trigger: CCTCAGACCCCATCCTGACCACCATCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAGGGTGAAGGTGATTTTCCACCCGGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS CCA 90 bp AGCCACGGACAAACTCCTCATAGTCCACAGGGAGCAGGGGGCTTGTaGAGGAGAGGAACTCCGGGTGGAAAATCACCTTCACCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: SHGQTPHSPQGAGGL*RRGTPGGKSPSPCR
Trigger: CCGACAGGGTGAAGGTGATTTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTGTCCGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS-3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCCCTGCCCCGAAGCGTaGGGACCTAGGCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: CSQLPSNSESAPALDLIAPCPEA*GPRQKE
Trigger: CTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGGCTTCCTTGTCCACGTaGAAGTTCTCCAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRASLST*KFSRLL
Trigger: CAACAACCTGGAGAACTTCAACGTGGACAAGGAAGC...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCGCTTCCTTGTCCACGTaGAAGTTCTCCAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGASLST*KFSRLL
Trigger: CAACAACCTGGAGAACTTCAACGTGGACAAGGAAGC...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGCTCTCCCCTGCTTCCTaGTCCACGTTGAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GPGPGDSRALIMHILEPELSPAS*STLKFS
Trigger: GGAGAACTTCAACGTGGACAAGGAAGCAGGGGAGAG...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCTCTCCCCTGCTTCCTaGTCCACGTTGAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: KRSRPRGLQGADYAYSGALSPAS*STLKFS
Trigger: GGAGAACTTCAACGTGGACAAGGAAGCAGGGGAGAG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGTGCTCTGGAAAGGCCTaGGACAGCGCCATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWCSGKA*DSAMWR
Trigger: GCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCA...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCATTCGCAGGGACACCACGTGGTTTCCAGAACTTGGTGGCCCGCATGCCGGGCTACACCTTGCAGCCCTaGCTGTTCATGGAATCCAGT +
Preference number: 5 (lower is better)
Translates to: PFAGTPRGFQNLVARMPGYTLQP*LFMESS
Trigger: ACTGGATTCCATGAACAGCAAGGGCTGCAAGGTGTA...GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CAA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCCGCCCGAAATACACCTaGCAGCCCTTGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: KRSRPRGLQGADYAYSGARPKYT*QPLLFM
Trigger: CATGAACAGCAAGGGCTGCAAGGTGTATTTCGGGCG...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCACGCTCGGCTTCCTATaGCAAGACCGCACCCCTGCC +
Preference number: 5 (lower is better)
Translates to: CSQLPSNSESAPALDLIATLGFL*QDRTPA
Trigger: GGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGT...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCAGAGTCCACGTTGAAATTGTaGGTCCGCGCTGGCATGATG +
Preference number: 5 (lower is better)
Translates to: GPGPGDSRALIMHILEPESTLKL*VRAGMM
Trigger: CATCATGCCAGCGCGGACCAACAATTTCAACGTGGA...CTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AACCTCTGGCACCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCGAAGCCGGAGAGATaGGTGGAGATACTGGGGATT +
Preference number: 5 (lower is better)
Translates to: NLWHHRRVMADSWPLGSGPKPER*VEILGI
Trigger: AATCCCCAGTATCTCCACCAATCTCTCCGGCTTCGG...ACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTTCTGGTGCACGGATGTaGCGCCGGTCCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVSGARM*RRSLAA
Trigger: GGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGA...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCGTGGTTTCCAGAACTaGGTGGCCCGCATGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKRGFQN*VARMPG
Trigger: GCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACG...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACTGGTTCTACCACCTCTaGCTTGGCCAAAGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHWFYHL*LGQSVG
Trigger: CCCTACACTTTGGCCAAGCAAGAGGTGGTAGAACCA...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 90 bp GCACGACACAGGCAGAGTCCAACGCCTGCCAACCACTCATGGAAGTaGGCAACCACATGTGGCTTCTCCTCACTCTGTGCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: ARHRQSPTPANHSWK*ATTCGFSSLCARNL
Trigger: CAAGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS TCA 90 bp GCACGACACAGGCAGAGTCCAACGCCTGCCAACCACTCATGGAAGTaGGCAACCACATGTGGCTTCTCCTCACTCTGTGCCAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: ARHRQSPTPANHSWK*ATTCGFSSLCARNS
Trigger: TGAGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS CCA 90 bp GAGTCCAACGCCTGCCAACCACTCATGGAAGTGAGCAACCACATGTaGCTTCTCCTCACTCTGTGCCAGGAACTCACCCAGGAACCAGGT +
Preference number: 5 (lower is better)
Translates to: ESNACQPLMEVSNHM*LLLTLCQELTQEPG
Trigger: ACCTGGTTCCTGGGTGAGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CAA 90 bp AAGCGGTCCAGGCCCAGGGGACTCCAGGGCGCTGATTATGCATATTCTGGAGCCATATCTGGTTTCCTCTaGAGCAAGTGCTGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: KRSRPRGLQGADYAYSGAISGFL*SKCCAS
Trigger: CGAGGCACAGCACTTGCTCAAGAGGAAACCAGATAT...GGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCCTGGACCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACTCCTTATCCAGCATCTaGTTCATGTCGGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHSLSSI*FMSGRL
Trigger: GAGCCTTCCCGACATGAACAAGATGCTGGATAAGGA...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCCTGTCGGCACTGCTATaGAAGAGGCCGATTCGGCGG +
Preference number: 5 (lower is better)
Translates to: CSQLPSNSESAPALDLIALSALL*KRPIRR
Trigger: CCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAG...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGCCGTGTCCACAGAGTaGCGCTTGCTGCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVAVSTE*RLLPLV
Trigger: CACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGC...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGAAGAGGACAGCGTCGTaGGCCTCGCGGTCGTACCAC +
Preference number: 5 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKKRTAS*ASRSYH
Trigger: GTGGTACGACCGCGAGGCCAACGACGCTGTCCTCTT...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS CCA 90 bp GAGTCCAACGCCTGCCAACCACTCATGGAAGTGAGCAACCACATGTaGCTTCTCCTCACTCTGTGCCAGGAACTTGCAGCCCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: ESNACQPLMEVSNHM*LLLTLCQELAALAV
Trigger: AACAGCAAGGGCTGCAAGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS-3UTR CAA 90 bp CCTGCCCTCCCCTCTCAACTGCAAACCAAGCGGTGCAGACACAGCACAGCACACTTCACATTCAGCCCATaGGGGGTCACAATATCTGGT +
Preference number: 5 (lower is better)
Translates to: PALPSQLQTKRCRHSTAHFTFSP*GVTISG
Trigger: ACCAGATATTGTGACCCCCAATGGGCTGAATGTGAA...GTGTGCTGTGCTGTGTCTGCACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGGTGTCCCAAAGCTGTTaGCGCACAGCTTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWVSQSC*RTAWPL
Trigger: CAAAGGCCAAGCTGTGCGCAAACAGCTTTGGGACAC...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGGTGTCCCAAAGCTGTTaGCGCACAGCTTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGVSQSC*RTAWPL
Trigger: CAAAGGCCAAGCTGTGCGCAAACAGCTTTGGGACAC...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp TACCACCTCTTGCTTGGCCAAAGTGTAGGGGATGACAGGAGCCGGATGGAGGGAAAGACTGCCGCTGCGTaGCAAAGATGGCTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YHLLLGQSVGDDRSRMEGKTAAA*QRWLSS
Trigger: TGAAGAGAGCCATCTTTGCAACGCAGCGGCAGTCTT...TCCCTCCATCCGGCTCCTGTCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 90 bp CCCATTGGGGGTCACAATATCTGGTTTCCTCTTGAGCAAGTGCTGTaGCTCGATGGCGGTGATCTGGGACACAGTAGTGAAGACGTGAGC +
Preference number: 5 (lower is better)
Translates to: PIGGHNIWFPLEQVL*LDGGDLGHSSEDVS
Trigger: GCTCACGTCTTCACTACTGTGTCCCAGATCACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAAACCAGATATTGTGACCCCCAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CCACCGCAGAGTAATGGCAGATTCCTGGCCTCTGGGAAGCGGTCCAGGCCCAGGAAGAAGTATAAGGTCTaGTCCAAGTTGAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PPQSNGRFLASGKRSRPRKKYKV*SKLKSR
Trigger: TCTGGACTTCAACTTGGACAAGACCTTATACTTCTT...CCTGGGCCTGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCGAGAAAGGCACGGCTTaGTGGATTCTGGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CSQLPSNSESAPALDLIAEKGTA*WILECR
Trigger: CCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTC...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGCCAGGTTAGGGGTGGGTGGTTCTACCACCTCTaGCTTGGCCAAAGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: LVVSQWAEQLGISQVRGGWFYHL*LGQSVG
Trigger: CCCTACACTTTGGCCAAGCAAGAGGTGGTAGAACCA...CCCACCCCTAACCTGGCTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp GGAGGACCATCTGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGATATCTGGTTTCCTCTaGAGCAAGTGCTGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: GGPSALSYLQTLKVPRLWISGFL*SKCCAS
Trigger: CGAGGCACAGCACTTGCTCAAGAGGAAACCAGATAT...CCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp TGCTCTCAGTTACCTTCAAACTCTGAAAGTGCCCCGGCTCTGGACTTGATCGCCTCCACGTTGAAATTGTaGGTCCGCGCTGGCATGATG +
Preference number: 5 (lower is better)
Translates to: CSQLPSNSESAPALDLIASTLKL*VRAGMM
Trigger: CATCATGCCAGCGCGGACCAACAATTTCAACGTGGA...GGCGATCAAGTCCAGAGCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGAGAAAGGCACGGCTTaGTGGATTCTGGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKEKGTA*WILECR
Trigger: CCTGCACTCCAGAATCCACAAAGCCGTGCCTTTCTC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCACGGCACTCCGATGTaGCAGGTATCCCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVHGTPM*QVSQSS
Trigger: AGAGCTCTGGGATACCTGCAACATCGGAGTGCCGTG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323798.8
CDS-3UTR CAA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGGTTTCCACGTTGAAATaGTTGGTCCGCGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKVSTLK*LVRAGM
Trigger: CATGCCAGCGCGGACCAACAATTTCAACGTGGAAAC...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCGTTTCCACGTTGAAATaGTTGGTCCGCGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFVSTLK*LVRAGM
Trigger: CATGCCAGCGCGGACCAACAATTTCAACGTGGAAAC...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTCCGAAGCCGGAGAGATaGGTGGAGATACTGGGGATT +
Preference number: 5 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVPKPER*VEILGI
Trigger: AATCCCCAGTATCTCCACCAATCTCTCCGGCTTCGG...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp GTAAGGATTCATAAAGCTTCCTCCCGAACTTTTCCTTCACCGTGTTaGCCGTGTCCCTGGAGGAAGCAGAGCAACAGGGTCACATACACA +
Preference number: 5 (lower is better)
Translates to: VRIHKASSRTFPSPC*PCPWRKQSNRVTYT
Trigger: TGTGTATGTGACCCTGTTGCTCTGCTTCCTCCAGGGACACGGCCAACACGGTGAAGGAAAAGTTCGGGAGGAAGCTTTATGAATCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496048.1
CDS-3UTR CAA 90 bp CAGAGCCCCACTTCTGGAGTTGAAATGGAGGACCATCTGCTCTCAGTTACCTTCAGGAACTTGCAGCCCTaGCTGTTCATGGAATCCAGT +
Preference number: 5 (lower is better)
Translates to: QSPTSGVEMEDHLLSVTFRNLQP*LFMESS
Trigger: ACTGGATTCCATGAACAGCAAGGGCTGCAAGTTCCT...GAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS-3UTR CAA 90 bp AGATCTAGAAGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTTTTTCCTTCACCGTGTaGGCCGTGTCCCAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RSRSQDLEPSGFTVGRAVFSFTV*AVSQSC
Trigger: ACAGCTTTGGGACACGGCCAACACGGTGAAGGAAAA...AACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp AGCCAGGACCTAGAACCTAGTGGTTTCACAGTGGGCAGAGCAGTTGGGAATAAGTCCTTATCCAGCATCTaGTTCATGTCGGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SQDLEPSGFTVGRAVGNKSLSSI*FMSGRL
Trigger: GAGCCTTCCCGACATGAACAAGATGCTGGATAAGGA...CTTATTCCCAACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS-3UTR CAA 90 bp CAGTTGGGAATAAGCCAGGTTAGGGGTGGGGGAAGACAGCCAGCTCTGTCCTCTAAGAAGTATAAGGTCTaGTCCAAGTTGAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: QLGISQVRGGGRQPALSSKKYKV*SKLKSR
Trigger: TCTGGACTTCAACTTGGACAAGACCTTATACTTCTT...AGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 90 bp GGATTCGAGCCTTGCTCTGAGCATGGAGGTTCTGGAACTCATGCATaGCAGAAAACTTCTTCACATTCAGCCCATTGGGGGTCACAATAT +
Preference number: 5 (lower is better)
Translates to: GFEPCSEHGGSGTHA*QKTSSHSAHWGSQY
Trigger: ATATTGTGACCCCCAATGGGCTGAATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000484289.2
CDS GCA 72 bp GGAGGAGGTGCAGGACGCTCGGCGCGGCCACTCTGGTaGACGGATGTTGCGCCGGTCCTTGGCGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GGGAGRSARPLW*TDVAPVLGGLL
Trigger: GAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCTCC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 72 bp CTCCTCGTCCTCACTCTGGTGCGGGCTGGAGTGTCGTaGCAGCGAGGGCGACGGTGGCACCGAGGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: LLVLTLVRAGVS*QRGRRWHRGWP
Trigger: CGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CAA 72 bp CAGGACGCTCGGCGCGGCCACTCTGGTGCACGGATGTaGCGCCGGTCCTTGGCGGCCTCCTCGTCCTCATCG +
Preference number: 6 (lower is better)
Translates to: QDARRGHSGARM*RRSLAASSSSS
Trigger: CGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CAA 90 bp GGGGTGCTGAGTGAGCTGGAGGTGGCCGTGTCCACAGAGTTGCGCTaGCTGCCGCTGGTGGAGGAGGTGCAGGACGCTCGGCGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: GVLSELEVAVSTELR*LPLVEEVQDARRGH
Trigger: GTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCTCACTCAGCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp GGCCCGTTCCGGGGATCCTCCTCGTCCTCACTCTGGTaGGGGCTGGAGTGTCGTGACAGCGAGGGCGACGGT +
Preference number: 6 (lower is better)
Translates to: GPFRGSSSSSLW*GLECRDSEGDG
Trigger: ACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp AGGACGCTCGGCGCGGCCACTCTGGTGCACGGATGTTaGGCCGGTCCTTGGCGGCCTCCTCGTCCTCATCGT +
Preference number: 6 (lower is better)
Translates to: RTLGAATLVHGC*AGPWRPPRPHR
Trigger: ACGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp CCACAGAGTTGCGCTTGCTGCCGCTGGTGGAGGAGGTaGAGGACGCTCGGCGCGGCCACTCTGGTGCACGGA +
Preference number: 6 (lower is better)
Translates to: PQSCACCRWWRR*RTLGAATLVHG
Trigger: TCCGTGCACCAGAGTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp AGCTGGAGGTGGCCGTGTCCACAGAGTTGCGCTTGCTaGCGCTGGTGGAGGAGGTGCAGGACGCTCGGCGCG +
Preference number: 6 (lower is better)
Translates to: SWRWPCPQSCAC*RWWRRCRTLGA
Trigger: CGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp TCCGGGGATCCTCCTCGTCCTCACTCTGGTGCGGGCTaGAGTGTCGTGACAGCGAGGGCGACGGTGGCACCG +
Preference number: 6 (lower is better)
Translates to: SGDPPRPHSGAG*SVVTARATVAP
Trigger: CGGTGCCACCGTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp AGCGGCCCGTTCCGGGGATCCTCCTCGTCCTCACTCTaGTGCGGGCTGGAGTGTCGTGACAGCGAGGGCGAC +
Preference number: 6 (lower is better)
Translates to: SGPFRGSSSSSL*CGLECRDSEGD
Trigger: GTCGCCCTCGCTGTCACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp GCGGCCACTCTGGTGCACGGATGTTGCGCCGGTCCTTaGCGGCCTCCTCGTCCTCATCGTAGCGCTCGCCGT +
Preference number: 6 (lower is better)
Translates to: AATLVHGCCAGP*RPPRPHRSARR
Trigger: ACGGCGAGCGCTACGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp AGGTGGCCGTGTCCACAGAGTTGCGCTTGCTGCCGCTaGTGGAGGAGGTGCAGGACGCTCGGCGCGGCCACT +
Preference number: 6 (lower is better)
Translates to: RWPCPQSCACCR*WRRCRTLGAAT
Trigger: AGTGGCCGCGCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp CCTTCGTCTGCAGCACCGTGTAGATGCCACCCACTGTaGGCCCAAGCGTGTGAGGGCAGGCCCCGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: PSSAAPCRCHPL*AQACEGRPRPR
Trigger: CCTCGGCCGGGGCCTGCCCTCACACGCTTGGGCCCACAGTGGGTGGCATCTACACGGTGCTGCAGACGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457974.1
CDS GCA 72 bp GTGAGCTGGAGGTGGCCGTGTCCACAGAGTTGCGCTTaGTGCCGCTGGTGGAGGAGGTGCAGGACGCTCGGC +
Preference number: 6 (lower is better)
Translates to: VSWRWPCPQSCA*CRWWRRCRTLG
Trigger: GCCGAGCGTCCTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCTCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp GCGCCCCAGCAGCGTGGCATGGGTGGTGAAGATGGTTaGTACAGGCAGTCGCCGGGCACGACACAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: APQQRGMGGEDG*YRQSPGTTQAE
Trigger: CTCTGCCTGTGTCGTGCCCGGCGACTGCCTGTAGCAACCATCTTCACCACCCATGCCACGCTGCTGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp CTCTCTGGAGCAGAGAGGCAGGACAGGCGGGGAGTGTaGTGGGGCGGACTTAGTTACGCTCCTCGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LSGAERQDRRGV*WGGLSYAPRPG
Trigger: CCCTGGGCGAGGAGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCTGTCCTGCCTCTCTGCTCCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp CCCGACGGGAAGCTTGCAAGACGCTCGGCTTCCTATTaGAAGACCGCACCCCTGCCCCGAAGCGTTGGGACC +
Preference number: 6 (lower is better)
Translates to: PDGKLARRSASY*KTAPLPRSVGT
Trigger: GGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS GCA 72 bp GTGCGGGGCCGAGTAGCTGGTGCCCGACGGGAAGCTTaGAAGACGCTCGGCTTCCTATTGCAAGACCGCACC +
Preference number: 6 (lower is better)
Translates to: VRGRVAGARREA*KTLGFLLQDRT
Trigger: GGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGCACCAGCTACTCGGCCCCGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS CAA 72 bp GCCCGACGGGAAGCTTGCAAGACGCTCGGCTTCCTATaGCAAGACCGCACCCCTGCCCCGAAGCGTTGGGAC +
Preference number: 6 (lower is better)
Translates to: ARREACKTLGFL*QDRTPAPKRWD
Trigger: GTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS CAA 72 bp GGTGCGGGGCCGAGTAGCTGGTGCCCGACGGGAAGCTaGCAAGACGCTCGGCTTCCTATTGCAAGACCGCAC +
Preference number: 6 (lower is better)
Translates to: GAGPSSWCPTGS*QDARLPIARPH
Trigger: GTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGCACCAGCTACTCGGCCCCGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS CAA 90 bp AGGACAGCGTCGTTGGCCTCGCGGTCGTACCACGGCACTCCGATGTaGCAGGTATCCCAGAGCTCTCCCTTCCAGCGCTCCAGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: RTASLASRSYHGTPM*QVSQSSPFQRSRAQ
Trigger: TTGGGCCCTGGAGCGCTGGAAGGGAGAGCTCTGGGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS TCA 72 bp GAAGGTCGGAGAGGCGCTCCGTGCGGTTCCGCTGGATaGTACGCTGCCGCCGGCTCTGCTGACAGAAACTGT +
Preference number: 6 (lower is better)
Translates to: EGRRGAPCGSAG*YAAAGSADRNC
Trigger: ACAGTTTCTGTCAGCAGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGAGCGCCTCTCCGACCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000594220.1
CDS TCA 72 bp ACCCCTGGGCCGCATCCGCCTCGTTGGGCTCGTAGGTaGAGTGCTCTGGAAAGGCCTTGGACAGCGCCATGT +
Preference number: 6 (lower is better)
Translates to: TPGPHPPRWARR*SALERPWTAPC
Trigger: ACATGGCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTACGAGCCCAACGAGGCGGATGCGGCCCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp CAAGACGCTCGGCTTCCTATTGCAAGACCGCACCCCTaGCCCGAAGCGTTGGGACCTAGGCAGAAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QDARLPIARPHP*PEALGPRQKEA
Trigger: GGCCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS GCA 72 bp CGTTGGCCTCGCGGTCGTACCACGGCACTCCGATGTTaGAGGTATCCCAGAGCTCTCCCTTCCAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: RWPRGRTTALRC*RYPRALPSSAP
Trigger: TGGAGCGCTGGAAGGGAGAGCTCTGGGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS GCA 72 bp CTGTCACCTTCGCCTTCGTCTGCAGCACCGTGTAGATaGCACCCACTGTGGGCCCAAGCGTGTGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: LSPSPSSAAPCR*HPLWAQACEGR
Trigger: CCTGCCCTCACACGCTTGGGCCCACAGTGGGTGGCATCTACACGGTGCTGCAGACGAAGGCGAAGGTGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457974.1
CDS CCA 72 bp TGTTCATGGAATCCAGTGTCCTCTTCAGGGCCGGGGTaGGGGCCTCCAGCAGTTCCACCTGGGTCCTCACGC +
Preference number: 6 (lower is better)
Translates to: CSWNPVSSSGPG*GPPAVPPGSSR
Trigger: GCGTGAGGACCCAGGTGGAACTGCTGGAGGCCCCCACCCCGGCCCTGAAGAGGACACTGGATTCCATGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS CCA 72 bp CGCATCCGCCTCGTTGGGCTCGTAGGTGAAGTGCTCTaGAAAGGCCTTGGACAGCGCCATGTGGCGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RIRLVGLVGEVL*KGLGQRHVARR
Trigger: TCTGCGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTACGAGCCCAACGAGGCGGATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp AGGAGAAACACAGGACCCAAAGCATGCATCTGGGAGTaGGCTGCGCCAGGGGCCGGAGCGAGGGCTGCTAAC +
Preference number: 6 (lower is better)
Translates to: RRNTGPKACIWE*AAPGAGARAAN
Trigger: GTTAGCAGCCCTCGCTCCGGCCCCTGGCGCAGCCCACTCCCAGATGCATGCTTTGGGTCCTGTGTTTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484289.2
CDS CAA 72 bp CTTCCTATTGCAAGACCGCACCCCTGCCCCGAAGCGTaGGGACCTAGGCAGAAGGAGGCCGCAGCGTCACTG +
Preference number: 6 (lower is better)
Translates to: LPIARPHPCPEA*GPRQKEAAASL
Trigger: CAGTGACGCTGCGGCCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263276.6
CDS CAA 72 bp TCGTTGGCCTCGCGGTCGTACCACGGCACTCCGATGTaGCAGGTATCCCAGAGCTCTCCCTTCCAGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SLASRSYHGTPM*QVSQSSPFQRS
Trigger: GGAGCGCTGGAAGGGAGAGCTCTGGGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS CAA 90 bp GTAGCTGGTGCCCGACGGGAAGCTTGCAAGACGCTCGGCTTCCTATaGCAAGACCGCACCCCTGCCCCGAAGCGTTGGGACCTAGGCAGA +
Preference number: 6 (lower is better)
Translates to: VAGARREACKTLGFL*QDRTPAPKRWDLGR
Trigger: TCTGCCTAGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCGAGCGTCTTGCAAGCTTCCCGTCGGGCACCAGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS TCA 72 bp CCAGAATCCTCAGGGGCCTGGGCGCTGACCGTAAGCTaGGGGGTCTGCGATGTGTTCCTCCATGAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: PESSGAWALTVS*GVCDVFLHEAA
Trigger: GGCTGCTTCATGGAGGAACACATCGCAGACCCCTCAGCTTACGGTCAGCGCCCAGGCCCCTGAGGATTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472004.5
CDS GCA 72 bp CAGTCGCCGGGCACGACACAGGCAGAGTCCAACGCCTaGCAACCACTCATGGAAGTGAGCAACCACATGTGG +
Preference number: 6 (lower is better)
Translates to: QSPGTTQAESNA*QPLMEVSNHMW
Trigger: CCACATGTGGTTGCTCACTTCCATGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGCCCGGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp ACCAGGTGGTCAGAAAGCCAAAGAGGACAGCGTCGTTaGCCTCGCGGTCGTACCACGGCACTCCGATGTTGC +
Preference number: 6 (lower is better)
Translates to: TRWSESQRGQRR*PRGRTTALRCC
Trigger: GCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCCTCTTTGGCTTTCTGACCACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS CAA 90 bp TCACCCAGGAACCAGGTGGTCAGAAAGCCAAAGAGGACAGCGTCGTaGGCCTCGCGGTCGTACCACGGCACTCCGATGTTGCAGGTATCC +
Preference number: 6 (lower is better)
Translates to: SPRNQVVRKPKRTAS*ASRSYHGTPMLQVS
Trigger: GGATACCTGCAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCCTCTTTGGCTTTCTGACCACCTGGTTCCTGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS CAA 72 bp AACCAGGTGGTCAGAAAGCCAAAGAGGACAGCGTCGTaGGCCTCGCGGTCGTACCACGGCACTCCGATGTTG +
Preference number: 6 (lower is better)
Translates to: NQVVRKPKRTAS*ASRSYHGTPML
Trigger: CAACATCGGAGTGCCGTGGTACGACCGCGAGGCCAACGACGCTGTCCTCTTTGGCTTTCTGACCACCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323798.8
ENST00000457974.1
CDS CAA 90 bp GACAGCCACGGACAAACTCCTCATAGTCCACAGGGAGCAGGGGGCTaGTGGAGGAGAGGAACTCCGGGTGGAAAATCACCTTCACCCTGT +
Preference number: 6 (lower is better)
Translates to: DSHGQTPHSPQGAGG*WRRGTPGGKSPSPC
Trigger: ACAGGGTGAAGGTGATTTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTGTCCGTGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS TCA 72 bp TCGATGGCGGTGATCTGGGACACAGTAGTGAAGACGTaGGCGCAGTGGGCTGCCGCCCTTTCCATGCAGTAT +
Preference number: 6 (lower is better)
Translates to: SMAVIWDTVVKT*AQWAAALSMQY
Trigger: ATACTGCATGGAAAGGGCGGCAGCCCACTGCGCTCACGTCTTCACTACTGTGTCCCAGATCACCGCCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp CATCCTCCCAGTCCTCCAGTCCTGGCAGTGAGGACATaGACAAAGTGCGGTTTAAAGGCATGGCTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: HPPSPPVLAVRT*TKCGLKAWLAQ
Trigger: CTGCGCCAGCCATGCCTTTAAACCGCACTTTGTCCATGTCCTCACTGCCAGGACTGGAGGACTGGGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000457974.1
CDS CAA 72 bp GGGTGGAAAATCACCTTCACCCTGTCGGCACTGCTATaGAAGAGGCCGATTCGGCGGATGGTGGTCAGGATG +
Preference number: 6 (lower is better)
Translates to: GWKITFTLSALL*KRPIRRMVVRM
Trigger: CATCCTGACCACCATCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAGGGTGAAGGTGATTTTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS CAA 72 bp GGACAAACTCCTCATAGTCCACAGGGAGCAGGGGGCTaGTGGAGGAGAGGAACTCCGGGTGGAAAATCACCT +
Preference number: 6 (lower is better)
Translates to: GQTPHSPQGAGG*WRRGTPGGKSP
Trigger: AGGTGATTTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS TCA 72 bp TGGCCCCGCACAAACTCCTGGATTCGAGCCTTGCTCTaGGCATGGAGGTTCTGGAACTCATGCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: WPRTNSWIRALL*AWRFWNSCMAE
Trigger: TTCTGCCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGAATCCAGGAGTTTGTGCGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000484289.2
CDS GCA 72 bp GCCGTTCACTCTGAGCAGATAGTTGAGCCGAGCCAATaGCTCCAGGAAGACGTCAGCACCCTTGTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: AVHSEQIVEPSQ*LQEDVSTLVGE
Trigger: TTCTCCAACAAGGGTGCTGACGTCTTCCTGGAGGCATTGGCTCGGCTCAACTATCTGCTCAGAGTGAACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000484289.2
CDS CCA 72 bp CAAACTCCTCATAGTCCACAGGGAGCAGGGGGCTTGTaGAGGAGAGGAACTCCGGGTGGAAAATCACCTTCA +
Preference number: 6 (lower is better)
Translates to: QTPHSPQGAGGL*RRGTPGGKSPS
Trigger: TGAAGGTGATTTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS CAA 72 bp ATGTGTTCCTCCATGAAGCAGCCGAAGCCGGAGAGATaGGTGGAGATACTGGGGATTCCCATAACCGTGCAC +
Preference number: 6 (lower is better)
Translates to: MCSSMKQPKPER*VEILGIPITVH
Trigger: GTGCACGGTTATGGGAATCCCCAGTATCTCCACCAATCTCTCCGGCTTCGGCTGCTTCATGGAGGAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000472004.5
ENST00000496048.1
CDS GCA 72 bp AAAAATGGCCCCGCACAAACTCCTGGATTCGAGCCTTaGTCTGAGCATGGAGGTTCTGGAACTCATGCATGG +
Preference number: 6 (lower is better)
Translates to: KNGPAQTPGFEP*SEHGGSGTHAW
Trigger: CCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGAATCCAGGAGTTTGTGCGGGGCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000484289.2
CDS CAA 90 bp GCTGGGATTACAACCATGAGCCACCATCGCGATCGGCCTGGTTCATaGCTTAAAGGGACAGCAACTGTTACAAGTAGGATGAGACCCTGC +
Preference number: 6 (lower is better)
Translates to: AGITTMSHHRDRPGS*LKGTATVTSRMRPC
Trigger: GCAGGGTCTCATCCTACTTGTAACAGTTGCTGTCCCTTTAAGCAATGAACCAGGCCGATCGCGATGGTGGCTCATGGTTGTAATCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594220.1
CDS GCA 72 bp GGTCACAATATCTGGTTTCCTCTTGAGCAAGTGCTGTaGCTCGATGGCGGTGATCTGGGACACAGTAGTGAA +
Preference number: 6 (lower is better)
Translates to: GHNIWFPLEQVL*LDGGDLGHSSE
Trigger: TTCACTACTGTGTCCCAGATCACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAAACCAGATATTGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263276.6
ENST00000323798.8
CDS CCA 72 bp CCTTGCTCTGAGCATGGAGGTTCTGGAACTCATGCATaGCAGAAAACTTCTTCACATTCAGCCCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: PCSEHGGSGTHA*QKTSSHSAHWG
Trigger: CCCCCAATGGGCTGAATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263276.6
ENST00000323798.8
ENST00000484289.2
CDS CAA 72 bp ACAACCATGAGCCACCATCGCGATCGGCCTGGTTCATaGCTTAAAGGGACAGCAACTGTTACAAGTAGGATG +
Preference number: 6 (lower is better)
Translates to: TTMSHHRDRPGS*LKGTATVTSRM
Trigger: CATCCTACTTGTAACAGTTGCTGTCCCTTTAAGCAATGAACCAGGCCGATCGCGATGGTGGCTCATGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594220.1