RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GYPC (Homo sapiens)

Ensembl gene IDs: ENSG00000136732

Ensembl transcript IDs: ENST00000259254.9, ENST00000356887.12, ENST00000409836.3, ENST00000459787.1, ENST00000484700.2

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCCTCCTCCGTTCCTCCCTGGGCAGGCACCTAGTGTTTCCAGGTaGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTG +
Preference number: 1 (lower is better)
Translates to: SPPPFLPGQAPSVSR*LSREESSALSLCLV
Trigger: CACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAGGAACGGAGGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR CCA 90 bp CGGTTACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATaGCAGACAAAGGTACCTTTTAGCTCTGGCACCTGCTGTTCCCCC +
Preference number: 1 (lower is better)
Translates to: RLHFKFISNRSELDQ*QTKVPFSSGTCCSP
Trigger: GGGGGAACAGCAGGTGCCAGAGCTAAAAGGTACCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
3UTR-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTaGTATCAGCAGGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLSLSVW*YQQGCW
Trigger: CCAGCACCCCTGCTGATACCACCAGACAGAGAGAGA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR GCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTTGGTATCAGCAGGGGTaGTGGGCGATGGGGTGTATT +
Preference number: 2 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSWYQQG*WAMGCI
Trigger: AATACACCCCATCGCCCAGCACCCCTGCTGATACCA...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTAGGGGTGCTGGGCGATaGGGTGTATTTTTCCTGATG +
Preference number: 2 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSRGAGR*GVFFLM
Trigger: CATCAGGAAAAATACACCCCATCGCCCAGCACCCCT...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGGGGTGCTGGGCGATaGGGTGTATTTTTCCTGATG +
Preference number: 2 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIRGAGR*GVFFLM
Trigger: CATCAGGAAAAATACACCCCATCGCCCAGCACCCCT...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGAGGGGTGCTGGGCGATaGGGTGTATTTTTCCTGATG +
Preference number: 2 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWRGAGR*GVFFLM
Trigger: CATCAGGAAAAATACACCCCATCGCCCAGCACCCCT...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTATCAGCAGGGGTGCTaGGCGATGGGGTGTATTTTT +
Preference number: 2 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWYQQGC*AMGCIF
Trigger: AAAAATACACCCCATCGCCCAGCACCCCTGCTGATA...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTCTCTCTCTGTCTGGTaGTATCAGCAGGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDSLSVW*YQQGCW
Trigger: CCAGCACCCCTGCTGATACCACCAGACAGAGAGAGA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCCGTGGAGCAAAAGGTaGCCTCTGGGGTGGCCATCG +
Preference number: 2 (lower is better)
Translates to: YISNLFPIVLSWINGRQRPWSKR*PLGWPS
Trigger: CGATGGCCACCCCAGAGGCCACCTTTTGCTCCACGG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR TCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGTTCCTGCCAGTGAGCTaGTGTTGTCCTGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: YISNLFPIVLSWINGRQRFLPVS*CCPALP
Trigger: GGGCAGTGCAGGACAACATCAGCTCACTGGCAGGAA...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTATCAGCAGGGGTGCTaGGCGATGGGGTGTATTTTT +
Preference number: 2 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDYQQGC*AMGCIF
Trigger: AAAAATACACCCCATCGCCCAGCACCCCTGCTGATA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCCTAGTGTTTCCAGGTaGCTATCTCGGGAAGAATCA +
Preference number: 2 (lower is better)
Translates to: YISNLFPIVLSWINGRQRPSVSR*LSREES
Trigger: TGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR CCA 72 bp TCTGGGGTGGCCATCGCCTCCCTGGGTCCCTGGGAGTaGCCTCTTGTAGCGCGAGTCCTCCTCCGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: SGVAIASLGPWE*PLVARVLLRSS
Trigger: GGAGGAACGGAGGAGGACTCGCGCTACAAGAGGCCACTCCCAGGGACCCAGGGAGGCGATGGCCACCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR CCA 72 bp TATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTaGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGT +
Preference number: 3 (lower is better)
Translates to: YLGKNQVLSLSV*WYQQGCWAMGC
Trigger: ACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR-3UTR CAA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGCCAGTGAGCTGATGTaGTCCTGCACTGCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: YISNLFPIVLSWINGRQRASELM*SCTAQG
Trigger: CCCCTGGGCAGTGCAGGACAACATCAGCTCACTGGC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
3UTR CCA 72 bp TTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATaGCAGACAAAGGTACCTTTTAGCTCTGGCACCTGC +
Preference number: 3 (lower is better)
Translates to: FKFISNRSELDQ*QTKVPFSSGTC
Trigger: GCAGGTGCCAGAGCTAAAAGGTACCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGTGGCCATCGCCTCCCTaGGTCCCTGGGAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGWPSPP*VPGSGL
Trigger: GAGGCCACTCCCAGGGACCCAGGGAGGCGATGGCCA...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGATGTTGTCCTGCACTaGCCAGGGGGCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGDVVLH*PGGPMC
Trigger: GCACATGGGGCCCCCTGGGCAGTGCAGGACAACATC...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTGGCCATCGCCTCCCTaGGTCCCTGGGAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLWPSPP*VPGSGL
Trigger: GAGGCCACTCCCAGGGACCCAGGGAGGCGATGGCCA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCTGGCCATCGCCTCCCTaGGTCCCTGGGAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGWPSPP*VPGSGL
Trigger: GAGGCCACTCCCAGGGACCCAGGGAGGCGATGGCCA...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATCCGTGGAGCAAAAGGTaGCCTCTGGGGTGGCCATCG +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYPWSKR*PLGWPS
Trigger: CGATGGCCACCCCAGAGGCCACCTTTTGCTCCACGG...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGAAGGCAGCCACCCCTaGAGGCAGCGGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSEGSHP*RQRGTQ
Trigger: CTGTGTGCCCCGCTGCCTCCAGGGGTGGCTGCCTTC...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATTTCCTGCCAGTGAGCTaGTGTTGTCCTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYFLPVS*CCPALP
Trigger: GGGCAGTGCAGGACAACATCAGCTCACTGGCAGGAA...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATCTTCAGTTGGCAGCTTaGGTGCAGCTGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYLQLAA*VQLLGC
Trigger: GCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAG...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCAGGGCAGGGTCTCCCTaGAGGGCTGCATCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLRAGSP*RAASAL
Trigger: GAGTGCAGATGCAGCCCTGCAGGGAGACCCTGCCCT...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGAAGGGCAGGGTCTCCCTaGAGGGCTGCATCTGCACTC +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRRAGSP*RAASAL
Trigger: GAGTGCAGATGCAGCCCTGCAGGGAGACCCTGCCCT...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCGCCACGCCGTGCTGTTaGGGCTTCTCGTCGACCACA +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLATPCC*GFSSTT
Trigger: TGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGC...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCCTGGGTCCCTGGGAGTaGCCTCTTGTAGCGCGAGTC +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGLGPWE*PLVARV
Trigger: GACTCGCGCTACAAGAGGCCACTCCCAGGGACCCAG...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGAGCAAAAGGTGGCCTCTaGGGTGGCCATCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRAKGGL*GGHRLP
Trigger: AGGGAGGCGATGGCCACCCCAGAGGCCACCTTTTGC...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCGCAAAAGGTGGCCTCTaGGGTGGCCATCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLAKGGL*GGHRLP
Trigger: AGGGAGGCGATGGCCACCCCAGAGGCCACCTTTTGC...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGCTGCAGGGCTGCATCTaGACTCTCAGCAAACTCCGT +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGLQGCI*TLSKLR
Trigger: ACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAG...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCACACAGGCACAACCCTaGAGTGCGGGCAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGTQAQP*SAGSAL
Trigger: GAGAGCACTGCCCGCACTGCAGGGTTGTGCCTGTGT...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGCGTCGACCACATTCCTaGGCGTCAGCCCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWRRPHS*ASARAE
Trigger: CTCTGCCCGGGCTGACGCCCAGGAATGTGGTCGACG...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCCGTCGACCACATTCCTaGGCGTCAGCCCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIRRPHS*ASARAE
Trigger: CTCTGCCCGGGCTGACGCCCAGGAATGTGGTCGACG...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCGTCGACCACATTCCTaGGCGTCAGCCCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGRRPHS*ASARAE
Trigger: CTCTGCCCGGGCTGACGCCCAGGAATGTGGTCGACG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATTGCCCTTGGCCTCATTaGTGTGGTACGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYCPWPH*CGTCPC
Trigger: ACAAGGGCACGTACCACACCAATGAGGCCAAGGGCA...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTCCGGCCCATCTCCTATaGCTCCCCTCTGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSPAHLL*LPSAIG
Trigger: TCCTATGGCAGAGGGGAGCCATAGGAGATGGGCCGG...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATTCTCAGCAAACTCCGTaGCCTTGGCCTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYSQQTP*PWPHWC
Trigger: ACACCAATGAGGCCAAGGGCACGGAGTTTGCTGAGA...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGGAGCTGATGTTGTCCTaGACTGCCCAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWELMLS*TAQGAP
Trigger: TGGGGCCCCCTGGGCAGTGCAGGACAACATCAGCTC...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGGCGGGCAGTGCTCTCTaGTTCAGTTGGCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVAGSAL*FSWQLE
Trigger: CTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGC...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCCTGCAGTGCGGGCAGTaGTCTCTGCTTCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLLQCGQ*SLLQLA
Trigger: TGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAG...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCGCCACGCCGTGCTGTTaGGGCTTCTCGTCGACCACA +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIATPCC*GFSSTT
Trigger: TGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGC...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCCTATCACCAGCATCTTaGAGGGCAGGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLLSPAS*RAGSPC
Trigger: GCAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAG...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTCTATCACCAGCATCTTaGAGGGCAGGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSLSPAS*RAGSPC
Trigger: GCAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAG...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCTGGGTCCCTGGGAGTaGCCTCTTGTAGCGCGAGTC +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGLGPWE*PLVARV
Trigger: GACTCGCGCTACAAGAGGCCACTCCCAGGGACCCAG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGCCGTGGAGCAAAAGGTaGCCTCTGGGGTGGCCATCG +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWPWSKR*PLGWPS
Trigger: CGATGGCCACCCCAGAGGCCACCTTTTGCTCCACGG...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGCTCTCTGCTTCAGTTaGCAGCTTGAGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGALCFS*QLECSC
Trigger: ACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGC...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTGGAGGTCTCCATTCTaGCATCCGGCCATCCAGACA +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLWRSPF*HPAIQT
Trigger: TGTCTGGATGGCCGGATGGCAGAATGGAGACCTCCA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGTGGTATCAGCAGGGGTaGTGGGCGATGGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVWYQQG*WAMGCI
Trigger: AATACACCCCATCGCCCAGCACCCCTGCTGATACCA...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTGATGTTGTCCTGCACTaGCCAGGGGGCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCDVVLH*PGGPMC
Trigger: GCACATGGGGCCCCCTGGGCAGTGCAGGACAACATC...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTGAGCTGATGTTGTCCTaGACTGCCCAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCELMLS*TAQGAP
Trigger: TGGGGCCCCCTGGGCAGTGCAGGACAACATCAGCTC...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATCAATGTCCATTATGGTaGGGGTGGAGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYQCPLW*GWRSPF
Trigger: GAATGGAGACCTCCACCCCCACCATAATGGACATTG...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGAGGGAGACTAGGACGATaGCCACAGCAGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRGRLGR*PQQQSH
Trigger: GTGTGATTGCTGCTGTGGCCATCGTCCTAGTCTCCC...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGCCCTTGGCCTCATTaGTGTGGTACGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRCPWPH*CGTCPC
Trigger: ACAAGGGCACGTACCACACCAATGAGGCCAAGGGCA...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCCAAACTCCGTGCCCTTaGCCTCATTGGTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGQTPCP*PHWCGT
Trigger: CGTACCACACCAATGAGGCCAAGGGCACGGAGTTTG...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCCTCTCTCTCTCTGTCTaGTGGTATCAGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGLSLSV*WYQQGC
Trigger: GCACCCCTGCTGATACCACCAGACAGAGAGAGAGAG...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGGTATTTTTCAGATGTaGACGGAGAGCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYGIFQM*TESRGQ
Trigger: CTGACCCCTGCTCTCCGTCCACATCTGAAAAATACC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTACATGTAGCGCAGCATaGCGAAGAGGAGGGAGACTA +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSTCSAA*RRGGRL
Trigger: TAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGT...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGACATGTAGCGCAGCATaGCGAAGAGGAGGGAGACTA +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVTCSAA*RRGGRL
Trigger: TAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGT...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCTTCCTGCCAGTGAGCTaGTGTTGTCCTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIFLPVS*CCPALP
Trigger: GGGCAGTGCAGGACAACATCAGCTCACTGGCAGGAA...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATCAACTGCTGAATGTTTaGAAGCCTTCTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYQLLNV*KPSGEP
Trigger: TGGTTCCCCAGAAGGCTTTCAAACATTCAGCAGTTG...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCATTGGTGTGGTACGTaGCCTTGTGCCGGTACATGT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVHWCGT*PCAGTC
Trigger: ACATGTACCGGCACAAGGGCACGTACCACACCAATG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCAGCAAACTCCGTaGCCTTGGCCTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLSQQTP*PWPHWC
Trigger: ACACCAATGAGGCCAAGGGCACGGAGTTTGCTGAGA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTGGCACAACCCTGCAGTaGGGGCAGTGCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCGTTLQ*GQCSLL
Trigger: AAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTGCC...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCCCATCCAGACATCCCTaGATCAGGCTCTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGPSRHP*IRLCNG
Trigger: ACCATTGCAGAGCCTGATCCAGGGATGTCTGGATGG...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR CCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCCATCCAGACATCCCTaGATCAGGCTCTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVPSRHP*IRLCNG
Trigger: ACCATTGCAGAGCCTGATCCAGGGATGTCTGGATGG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR CCA 90 bp GAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCCGACAATGTCCATTATaGTGGGGGTGGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EESSALSLCLVVSAGVLGRQCPL*WGWRSP
Trigger: TGGAGACCTCCACCCCCACCATAATGGACATTGTCG...GCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCTTGGCCTCATTGGTGTaGTACGTGCCCTTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGILASLV*YVPLCR
Trigger: CCGGCACAAGGGCACGTACCACACCAATGAGGCCAA...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCAGGGGTGCTGGGCGATaGGGTGTATTTTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLRGAGR*GVFFLM
Trigger: CATCAGGAAAAATACACCCCATCGCCCAGCACCCCT...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTCTCTCTGTCTaGTGGTATCAGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSLSLSV*WYQQGC
Trigger: GCACCCCTGCTGATACCACCAGACAGAGAGAGAGAG...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATTTCATGGGGGTCCTTaGAGACTTCCGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRFHGGP*RLPRLR
Trigger: TCTCAGCCTCGGAAGTCTCCAAGGACCCCCATGAAA...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGCAGCTGTCCATTCTCTaGCAGAAGGCAGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWQLSIL*QKAATP
Trigger: AGGGGTGGCTGCCTTCTGCCAGAGAATGGACAGCTG...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATCAATCACACCTGCAATaGCGACAATGTCCATTATGG +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYQSHLQ*RQCPLW
Trigger: CCATAATGGACATTGTCGTCATTGCAGGTGTGATTG...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTTTCCTGCCAGTGAGCTaGTGTTGTCCTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCFLPVS*CCPALP
Trigger: GGGCAGTGCAGGACAACATCAGCTCACTGGCAGGAA...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCGGACTTTCCTGCCAGTaGGCTGATGTTGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIGLSCQ*ADVVLH
Trigger: GTGCAGGACAACATCAGCTCACTGGCAGGAAAGTCC...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGGGACTTTCCTGCCAGTaGGCTGATGTTGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWGLSCQ*ADVVLH
Trigger: GTGCAGGACAACATCAGCTCACTGGCAGGAAAGTCC...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGGACTTTCCTGCCAGTaGGCTGATGTTGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGGLSCQ*ADVVLH
Trigger: GTGCAGGACAACATCAGCTCACTGGCAGGAAAGTCC...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCCCTGGATCAGGCTCTaGAATGGTGGTAGTATGCAT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVPWIRL*NGGSMH
Trigger: ATGCATACTACCACCATTGCAGAGCCTGATCCAGGG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR GCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGAGCAGCAATCACACCTaGAATGACGACAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGSSNHT*NDDNVH
Trigger: ATGGACATTGTCGTCATTGCAGGTGTGATTGCTGCT...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATAGCAGCAATCACACCTaGAATGACGACAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYSSNHT*NDDNVH
Trigger: ATGGACATTGTCGTCATTGCAGGTGTGATTGCTGCT...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCTGCAGGGCTGCATCTaGACTCTCAGCAAACTCCGT +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGLQGCI*TLSKLR
Trigger: ACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGTGCAGAACCTCAGTTaGAATGGATTCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSVQNLS*NGFSGP
Trigger: TGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCAC...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGACAATGTCCATTATGGTaGGGGTGGAGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRQCPLW*GWRSPF
Trigger: GAATGGAGACCTCCACCCCCACCATAATGGACATTG...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCGACAATGTCCATTATaGTGGGGGTGGAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSRQCPL*WGWRSP
Trigger: TGGAGACCTCCACCCCCACCATAATGGACATTGTCG...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGGGAGACTAGGACGATaGCCACAGCAGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGGRLGR*PQQQSH
Trigger: GTGTGATTGCTGCTGTGGCCATCGTCCTAGTCTCCC...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCTCTCTCTCTGTCTGGTaGTATCAGCAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGISLSVW*YQQGCW
Trigger: CCAGCACCCCTGCTGATACCACCAGACAGAGAGAGA...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCAATGCAGGTGTTTCATaGGGGTCCTTGGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLNAGVS*GSLETS
Trigger: GGAAGTCTCCAAGGACCCCCATGAAACACCTGCATT...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTTTTTCCTGCGTGGGCTaGTCTTTACATTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSFSCVG*SLHFPA
Trigger: GGCCGGGAAATGTAAAGACCAGCCCACGCAGGAAAA...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGGAACCTCAGTTGCAATaGATTCTCAGGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVEPQLQ*ILRASG
Trigger: ACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTC...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGCTATGCTCATCTTTGTaGAGTTGGGAGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGLCSSL*SWEWLF
Trigger: GAAAAGCCACTCCCAACTCCACAAAGATGAGCATAG...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGATCAGGCTCGAGGCTaGGAGGCCACGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDDQARG*EATPCC
Trigger: ACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCACATGTAGCGCAGCATaGCGAAGAGGAGGGAGACTA +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGITCSAA*RRGGRL
Trigger: TAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGT...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCTGCCATAGGAGTTGTTaGAGGGGTTCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGICHRSC*RGSPLP
Trigger: AGGAAGTGGGGAACCCCTTCAACAACTCCTATGGCA...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCATTGGTGTGGTACGTaGCCTTGTGCCGGTACATGT +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGHWCGT*PCAGTC
Trigger: ACATGTACCGGCACAAGGGCACGTACCACACCAATG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTCTCAGCAAACTCCGTaGCCTTGGCCTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWSQQTP*PWPHWC
Trigger: ACACCAATGAGGCCAAGGGCACGGAGTTTGCTGAGA...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTTGGTATCAGCAGGGGTaGTGGGCGATGGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCWYQQG*WAMGCI
Trigger: AATACACCCCATCGCCCAGCACCCCTGCTGATACCA...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGATGACTTATTTCCTTaGTTCCCCAGCCCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGDDLFP*FPSPRV
Trigger: TACCCGGGGGCTGGGGAAGCAAGGAAATAAGTCATC...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGGATGACTTATTTCCTTaGTTCCCCAGCCCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWDDLFP*FPSPRV
Trigger: TACCCGGGGGCTGGGGAAGCAAGGAAATAAGTCATC...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCGTGCAGCTGTTGGGGTaGAGAACCTCAGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIVQLLG*RTSVAM
Trigger: CATTGCAACTGAGGTTCTGCACCCCAACAGCTGCAC...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGACTGCAGCCTTCACTATaGTCATCTTTGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRLQPSL*SSLWSW
Trigger: CCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAG...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCAAACTCCGTGCCCTTaGCCTCATTGGTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCQTPCP*PHWCGT
Trigger: CGTACCACACCAATGAGGCCAAGGGCACGGAGTTTG...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTTATCAGCAGGGGTGCTaGGCGATGGGGTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSYQQGC*AMGCIF
Trigger: AAAAATACACCCCATCGCCCAGCACCCCTGCTGATA...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTTCTCTCTCTGTCTGGTaGTATCAGCAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCSLSVW*YQQGCW
Trigger: CCAGCACCCCTGCTGATACCACCAGACAGAGAGAGA...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTCAATCACACCTGCAATaGCGACAATGTCCATTATGG +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSQSHLQ*RQCPLW
Trigger: CCATAATGGACATTGTCGTCATTGCAGGTGTGATTG...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCAGTCAGCATACAGATaGCTTATTTCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVQSAYR*LISLLP
Trigger: GGGAAGCAAGGAAATAAGTCATCTGTATGCTGACTG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTATTTCCAATCGTTCTaGGCTGGATCAATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLYFQSF*AGSMAD
Trigger: GTCTGCCATTGATCCAGCTCAGAACGATTGGAAATA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCAGTACTCCTTTCTGCTaGTATCACCAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLSTPFC*YHQHLG
Trigger: TCCAAGATGCTGGTGATAGCAGCAGAAAGGAGTACT...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGAGTACTCCTTTCTGCTaGTATCACCAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVSTPFC*YHQHLG
Trigger: TCCAAGATGCTGGTGATAGCAGCAGAAAGGAGTACT...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTGATGACTTATTTCCTTaGTTCCCCAGCCCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCDDLFP*FPSPRV
Trigger: TACCCGGGGGCTGGGGAAGCAAGGAAATAAGTCATC...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTAGTTGGCAGCTTGAGTaGAGCTGTTGGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCSWQLE*SCWGAE
Trigger: TTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACT...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGCAATGTCCATTATGGTaGGGGTGGAGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWQCPLW*GWRSPF
Trigger: GAATGGAGACCTCCACCCCCACCATAATGGACATTG...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTTATCAGCAGGGGTGCTaGGCGATGGGGTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGYQQGC*AMGCIF
Trigger: AAAAATACACCCCATCGCCCAGCACCCCTGCTGATA...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGTGGCTTTTCATCCATaGGATTTGCCATTGGCTACA +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSVAFHP*DLPLAT
Trigger: TGTAGCCAATGGCAAATCCCATGGATGAAAAGCCAC...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp CTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTTGTGGAGTTGGGAGTaGCTTTTCATCCATGGGATT +
Preference number: 4 (lower is better)
Translates to: LGRHLVFPGGYLGKNQVLLWSWE*LFIHGI
Trigger: AATCCCATGGATGAAAAGCCACTCCCAACTCCACAA...GAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCCAAATGTCAAGGACTaGCATTTGATGCCATTATCC +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVPNVKD*HLMPLS
Trigger: GGATAATGGCATCAAATGTCAGTCCTTGACATTTGG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTTATTTCCAATCGTTCTaGGCTGGATCAATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSYFQSF*AGSMAD
Trigger: GTCTGCCATTGATCCAGCTCAGAACGATTGGAAATA...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCCCTGGATCAGGCTCTaGAATGGTGGTAGTATGCAT +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCPWIRL*NGGSMH
Trigger: ATGCATACTACCACCATTGCAGAGCCTGATCCAGGG...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR GCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGACGAACCAACTAAACTaGAGCCTTCACTATGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVTNQLN*SLHYAH
Trigger: ATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGT...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCCTAGTGTTTCCAGGTaGCTATCTCGGGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGPSVSR*LSREES
Trigger: TGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp CTCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTTCTGAGCTGGATCAATaGCAGACAAAGGTACCTTTT +
Preference number: 4 (lower is better)
Translates to: LPGQAPSVSRWLSREESSSELDQ*QTKVPF
Trigger: AAAAGGTACCTTTGTCTGCCATTGATCCAGCTCAGA...ACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGTCTGAGCTGGATCAATaGCAGACAAAGGTACCTTTT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVSELDQ*QTKVPF
Trigger: AAAAGGTACCTTTGTCTGCCATTGATCCAGCTCAGA...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGACATGGGATTTGCCATTaGCTACAGTCATTCCTACTA +
Preference number: 4 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRHGICH*LQSFLL
Trigger: TAGTAGGAATGACTGTAGCCAATGGCAAATCCCATG...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGTCATCTTTGTGGAGTTaGGAGTGGCTTTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVSSLWS*EWLFIH
Trigger: ATGGATGAAAAGCCACTCCCAACTCCACAAAGATGA...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR TCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGATCAGGCTCGAGGCTaGGAGGCCACGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRDQARG*EATPCC
Trigger: ACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000409836.3
CDS-3UTR TCA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTCAGTCAGCATACAGATaGCTTATTTCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGQSAYR*LISLLP
Trigger: GGGAAGCAAGGAAATAAGTCATCTGTATGCTGACTG...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCTCAAGGACTGACATTTaGTGCCATTATCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGISRTDI*CHYPQS
Trigger: TGACTGGGGATAATGGCATCAAATGTCAGTCCTTGA...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTATTTCCAATCGTTCTaGGCTGGATCAATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWYFQSF*AGSMAD
Trigger: GTCTGCCATTGATCCAGCTCAGAACGATTGGAAATA...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGGAGACTTCCGAGGCTaGGAGGCCACGCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRGDFRG*EATPCC
Trigger: ACAGCACGGCGTGGCCTCTCAGCCTCGGAAGTCTCC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGTACTCCTTTCTGCTaGTATCACCAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGISTPFC*YHQHLG
Trigger: TCCAAGATGCTGGTGATAGCAGCAGAAAGGAGTACT...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGAATCATGACAGGAAATaGAGGTGTTTCATGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWNHDRK*RCFMGV
Trigger: GACCCCCATGAAACACCTGCATTTCCTGTCATGATT...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTTGGCCTCATTGGTGTaGTACGTGCCCTTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDLASLV*YVPLCR
Trigger: CCGGCACAAGGGCACGTACCACACCAATGAGGCCAA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCCCAAATGTCAAGGACTaGCATTTGATGCCATTATCC +
Preference number: 4 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIPNVKD*HLMPLS
Trigger: GGATAATGGCATCAAATGTCAGTCCTTGACATTTGG...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGATGTTGTCCTGCACTaGCCAGGGGGCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRDVVLH*PGGPMC
Trigger: GCACATGGGGCCCCCTGGGCAGTGCAGGACAACATC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGAGCTGATGTTGTCCTaGACTGCCCAGGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRELMLS*TAQGAP
Trigger: TGGGGCCCCCTGGGCAGTGCAGGACAACATCAGCTC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGGGAGACTAGGACGATaGCCACAGCAGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDGRLGR*PQQQSH
Trigger: GTGTGATTGCTGCTGTGGCCATCGTCCTAGTCTCCC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTGCCCTTGGCCTCATTaGTGTGGTACGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDCPWPH*CGTCPC
Trigger: ACAAGGGCACGTACCACACCAATGAGGCCAAGGGCA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACCAAACTCCGTGCCCTTaGCCTCATTGGTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDQTPCP*PHWCGT
Trigger: CGTACCACACCAATGAGGCCAAGGGCACGGAGTTTG...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACCTCTCTCTCTCTGTCTaGTGGTATCAGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDLSLSV*WYQQGC
Trigger: GCACCCCTGCTGATACCACCAGACAGAGAGAGAGAG...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCTGGGTCCCTGGGAGTaGCCTCTTGTAGCGCGAGTC +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRLGPWE*PLVARV
Trigger: GACTCGCGCTACAAGAGGCCACTCCCAGGGACCCAG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGCAAAAGGTGGCCTCTaGGGTGGCCATCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRAKGGL*GGHRLP
Trigger: AGGGAGGCGATGGCCACCCCAGAGGCCACCTTTTGC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCCAAATGTCAAGGACTaGCATTTGATGCCATTATCC +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCPNVKD*HLMPLS
Trigger: GGATAATGGCATCAAATGTCAGTCCTTGACATTTGG...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACCATTGGTGTGGTACGTaGCCTTGTGCCGGTACATGT +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDHWCGT*PCAGTC
Trigger: ACATGTACCGGCACAAGGGCACGTACCACACCAATG...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGTCACACTCCTCTGTTaGCACCAAGAGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDVTLLC*HQEPLF
Trigger: GAAGAGAGGCTCTTGGTGGCAACAGAGGAGTGTGAC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp CCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTTTCATCCATGGGATTTaGCATTGGCTACAGTCATTC +
Preference number: 4 (lower is better)
Translates to: PSVSRWLSREESSALSLCFIHGI*HWLQSF
Trigger: GAATGACTGTAGCCAATGGCAAATCCCATGGATGAA...ACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACAGGGGTGCTGGGCGATaGGGTGTATTTTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDRGAGR*GVFFLM
Trigger: CATCAGGAAAAATACACCCCATCGCCCAGCACCCCT...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGCAATGGTGGTAGTATaGATTGTGGTGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDAMVVV*IVVEAE
Trigger: CTCTGCCTCCACCACAATGCATACTACCACCATTGC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGTTGGCCTCATTGGTGTaGTACGTGCCCTTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRLASLV*YVPLCR
Trigger: CCGGCACAAGGGCACGTACCACACCAATGAGGCCAA...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCTATCACCAGCATCTTaGAGGGCAGGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRLSPAS*RAGSPC
Trigger: GCAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCTGCAGGGCTGCATCTaGACTCTCAGCAAACTCCGT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRLQGCI*TLSKLR
Trigger: ACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACCCTAGTGTTTCCAGGTaGCTATCTCGGGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDPSVSR*LSREES
Trigger: TGATTCTTCCCGAGATAGCCACCTGGAAACACTAGG...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACCAGTCAGCATACAGATaGCTTATTTCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDQSAYR*LISLLP
Trigger: GGGAAGCAAGGAAATAAGTCATCTGTATGCTGACTG...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTCAAGGACTGACATTTaGTGCCATTATCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDSRTDI*CHYPQS
Trigger: TGACTGGGGATAATGGCATCAAATGTCAGTCCTTGA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR GCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACAGCAGCAATCACACCTaGAATGACGACAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDSSNHT*NDDNVH
Trigger: ATGGACATTGTCGTCATTGCAGGTGTGATTGCTGCT...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCTTGAGTGCAGCTGTTaGGGTGCAGAACCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRLECSC*GAEPQL
Trigger: CAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTGTTTGAAAGCCTTCTaGGGAACCACGAACCAACTA +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDCLKAF*GTTNQL
Trigger: TAGTTGGTTCGTGGTTCCCCAGAAGGCTTTCAAACA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR GCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGCAATGGTGGTAGTATaGATTGTGGTGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRAMVVV*IVVEAE
Trigger: CTCTGCCTCCACCACAATGCATACTACCACCATTGC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGTATCAGCAGGGGTGCTaGGCGATGGGGTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRYQQGC*AMGCIF
Trigger: AAAAATACACCCCATCGCCCAGCACCCCTGCTGATA...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGCAATCACACCTGCAATaGCGACAATGTCCATTATGG +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRQSHLQ*RQCPLW
Trigger: CCATAATGGACATTGTCGTCATTGCAGGTGTGATTG...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGTCAAGGACTGACATTTaGTGCCATTATCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRSRTDI*CHYPQS
Trigger: TGACTGGGGATAATGGCATCAAATGTCAGTCCTTGA...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR TCA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACTCTTGCATTTTCAGATaGCACTGTGCTAAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDSCIFR*HCAKKF
Trigger: GAACTTTTTAGCACAGTGTCATCTGAAAATGCAAGA...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CCA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGTCTGAGCTGGATCAATaGCAGACAAAGGTACCTTTT +
Preference number: 4 (lower is better)
Translates to: YISNLFPIVLSWINGRQRSELDQ*QTKVPF
Trigger: AAAAGGTACCTTTGTCTGCCATTGATCCAGCTCAGA...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS CCA 90 bp GAGAGGCCACGCCGTGCTGTTGGGGCTTCTCGTCGACCACATTCCTaGGCGTCAGCCCGGGCAGAGACCGCGGGGACTGGCCAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: ERPRRAVGASRRPHS*ASARAETAGTGQAG
Trigger: CCCGGCCTGGCCAGTCCCCGCGGTCTCTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
ENST00000459787.1
ENST00000484700.2
CDS GCA 90 bp GAAGGCAGCCACCCCTGGAGGCAGCGGGGCACACAGGCACAACCCTaGAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: EGSHPWRQRGTQAQP*SAGSALCFSWQLEC
Trigger: GCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTGCCTGTGTGCCCCGCTGCCTCCAGGGGTGGCTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp CTCAGGATGTCAGCTGTCCATTCTCTGGCAGAAGGCAGCCACCCCTaGAGGCAGCGGGGCACACAGGCACAACCCTGCAGTGCGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LRMSAVHSLAEGSHP*RQRGTQAQPCSAGS
Trigger: ACTGCCCGCACTGCAGGGTTGTGCCTGTGTGCCCCGCTGCCTCCAGGGGTGGCTGCCTTCTGCCAGAGAATGGACAGCTGACATCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCAC +
Preference number: 5 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYGHAVL*GLLVDH
Trigger: GTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS GCA 90 bp CAGCGGGGCACACAGGCACAACCCTGCAGTGCGGGCAGTGCTCTCTaGTTCAGTTGGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCT +
Preference number: 5 (lower is better)
Translates to: QRGTQAQPCSAGSAL*FSWQLECSCWGAEP
Trigger: AGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTGCCTGTGTGCCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 90 bp CAACCCTTTGCTCCCCAGGGAGCTCTGCAAGTCCCCAGAAATACTTaGCCAACCACGGGCACCCTTGGAAGGGTCCAGCTGCTGACCACC +
Preference number: 5 (lower is better)
Translates to: QPFAPQGALQVPRNT*PTTGTLGRVQLLTT
Trigger: GGTGGTCAGCAGCTGGACCCTTCCAAGGGTGCCCGTGGTTGGGCAAGTATTTCTGGGGACTTGCAGAGCTCCCTGGGGAGCAAAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS-3UTR CAA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGCCAGTGAGCTGATGTaGTCCTGCACTGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYASELM*SCTAQG
Trigger: CCCCTGGGCAGTGCAGGACAACATCAGCTCACTGGC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS GCA 90 bp TCCTTTCTGCTGCTATCACCAGCATCTTGGAGGGCAGGGTCTCCCTaGAGGGCTGCATCTGCACTCTCAGCAAACTCCGTGCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SFLLLSPASWRAGSP*RAASALSANSVPLA
Trigger: GGCCAAGGGCACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAGCAGCAGAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGCTATCACCAGCATCTaGGAGGGCAGGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYAITSI*EGRVSL
Trigger: CAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAGC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp GTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCAC +
Preference number: 5 (lower is better)
Translates to: VFPGGYLGKNQVLSLSVWGHAVL*GLLVDH
Trigger: GTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCC...CCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGCAAACTCCGTGCCCTaGGCCTCATTGGTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYANSVP*ASLVWY
Trigger: GTACCACACCAATGAGGCCAAGGGCACGGAGTTTGC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGGCCAGTGAGCTGATGTaGTCCTGCACTGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVASELM*SCTAQG
Trigger: CCCCTGGGCAGTGCAGGACAACATCAGCTCACTGGC...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp GCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGGTGTATGTTTCATGGGGGTCCTaGGAGACTTCCGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALSLCLVVSAGVLGDGVYVSWGS*ETSEAE
Trigger: CTCAGCCTCGGAAGTCTCCAAGGACCCCCATGAAAC...ATACACCCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS TCA 90 bp AAGGGCTGCACCGCTGTTTGTCTCCCAAGGCAAGTGTTGAAGGTCTaGAACCTGAGTCCTGGAGAACTGCTTGGGCTGCTGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: KGCTAVCLPRQVLKV*NLSPGELLGLLGWA
Trigger: AGCCCAGCCCAGCAGCCCAAGCAGTTCTCCAGGACTCAGGTTTCAGACCTTCAACACTTGCCTTGGGAGACAAACAGCGGTGCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 90 bp CCCTGCAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTGAGTaGAGCTGTTGGGGTGCAGAACCTCAGTTGCAATGGATTCTCAGG +
Preference number: 5 (lower is better)
Translates to: PCSAGSALCFSWQLE*SCWGAEPQLQWILR
Trigger: CCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp GCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTGAGTGCAGCTGTTaGGGTGCAGAACCTCAGTTGCAATGGATTCTCAGGGCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: AGSALCFSWQLECSC*GAEPQLQWILRASG
Trigger: ACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp ACACAGGCACAACCCTGCAGTGCGGGCAGTGCTCTCTGCTTCAGTTaGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCAA +
Preference number: 5 (lower is better)
Translates to: TQAQPCSAGSALCFS*QLECSCWGAEPQLQ
Trigger: TTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp GGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTGCCAGTGAGCTGATGTaGTCCTGCACTGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GRHLVFPGGYLGKNQVLSASELM*SCTAQG
Trigger: CCCCTGGGCAGTGCAGGACAACATCAGCTCACTGGC...AGAGAGCACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS TCA 90 bp ACAACCCTGCAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTaGGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCAATGGATTCT +
Preference number: 5 (lower is better)
Translates to: TTLQCGQCSLLQLAA*VQLLGCRTSVAMDS
Trigger: AGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 90 bp TGGCCCAACCTCTCACCTCTGTTGAGGGGACCTCTTCCTACTCACTaGAGATGGGTTCACTTGTTCCCACCACAAGCGCAGAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: WPNLSPLLRGPLPTH*RWVHLFPPQAQNAL
Trigger: CAAGGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAGGTTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 90 bp CCTCAGTTGCAATGGATTCTCAGGGCCAGTGGTATTTTTCAGATGTaGACGGAGAGCAGGGGTCAGGTGCTAGCCCTGAGGCTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PQLQWILRASGIFQM*TESRGQVLALRLEV
Trigger: GACTTCCAGCCTCAGGGCTAGCACCTGACCCCTGCTCTCCGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp CTCAGTTCAAACATTCAGGAGGATTGGCTCCAAGGAGGAGGTTCGTaGCTACATCCCAAGGCAGATAGCCGTGCTTCCCCAGGAGATGTG +
Preference number: 5 (lower is better)
Translates to: LSSNIQEDWLQGGGS*LHPKADSRASPGDV
Trigger: CACATCTCCTGGGGAAGCACGGCTATCTGCCTTGGGATGTAGCCACGAACCTCCTCCTTGGAGCCAATCCTCCTGAATGTTTGAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS-3UTR CAA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGAAGTCACACTCCTCTGTaGCCACCAAGAGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRSHTPL*PPRASL
Trigger: AAGAGAGGCTCTTGGTGGCAACAGAGGAGTGTGACT...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp TCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATGGGCTCATCTTTGTGGAGTaGGGAGTGGCTTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: SSALSLCLVVSAGVLGDGLIFVE*GVAFHP
Trigger: TGGATGAAAAGCCACTCCCAACTCCACAAAGATGAG...CCCATCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 90 bp TACTCACTGCAGATGGGTTCACTTGTTCCCACCACAAGCGCAGAATaGCTTGTACTTCACAACCCTTTGCTCCCCAGGGAGCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: YSLQMGSLVPTTSAE*LVLHNPLLPRELCK
Trigger: CTTGCAGAGCTCCCTGGGGAGCAAAGGGTTGTGAAGTACAAGGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 90 bp TGGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCAATaGATTCTCAGGGCCAGTGGTATTTTTCAGATGTGGACGGAGAGC +
Preference number: 5 (lower is better)
Translates to: WQLECSCWGAEPQLQ*ILRASGIFQMWTES
Trigger: GCTCTCCGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCAC +
Preference number: 5 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDGHAVL*GLLVDH
Trigger: GTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp CAGGTGGCTATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCGGTGCAGAACCTCAGTaGCAATGGATTCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVAISGRIKCSLSLSGGIGAEPQ*QWILRA
Trigger: GGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACC...GATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGATAGCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 90 bp TCAGTTGGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTaGAATGGATTCTCAGGGCCAGTGGTATTTTTCAGATGTGGACGG +
Preference number: 5 (lower is better)
Translates to: SVGSLSAAVGVQNLS*NGFSGPVVFFRCGR
Trigger: CCGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp CTCGCACAGCAGGGATCCTGCCATAAATCAATCCGAAGTCTAATGTaGAATGGCTTGCAAGCAAGGGCTGCACCGCTGTTTGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: LAQQGSCHKSIRSLM*NGLQARAAPLFVSQ
Trigger: TTGGGAGACAAACAGCGGTGCAGCCCTTGCTTGCAAGCCATTCCACATTAGACTTCGGATTGATTTATGGCAGGATCCCTGCTGTGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 90 bp AACCTCTCACCTCTGTTGAGGGGACCTCTTCCTACTCACTGCAGATaGGTTCACTTGTTCCCACCACAAGCGCAGAATGCCTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: NLSPLLRGPLPTHCR*VHLFPPQAQNALYF
Trigger: GAAGTACAAGGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 90 bp ATGTACATACAGGTCTGCCACCTGAAGAGGCAAACTGACTTGACTTaGCCCAACCTCTCACCTCTGTTGAGGGGACCTCTTCCTACTCAC +
Preference number: 5 (lower is better)
Translates to: MYIQVCHLKRQTDLT*PNLSPLLRGPLPTH
Trigger: GTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAGGTTGGGCCAAGTCAAGTCAGTTTGCCTCTTCAGGTGGCAGACCTGTATGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS-3UTR CAA 90 bp TCCCTGGGCAGGCACCTAGTGTTTCCAGGTGGCTATCTCGGGAAGAATCAAGTGCCATGGGATTTGCCATaGGCTACAGTCATTCCTACT +
Preference number: 5 (lower is better)
Translates to: SLGRHLVFPGGYLGKNQVPWDLP*ATVIPT
Trigger: AGTAGGAATGACTGTAGCCAATGGCAAATCCCATGG...CACTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp AGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTGCTGGGCGATCACTATGCTCATCTTaGTGGAGTTGGGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RIKCSLSLSGGISRGAGRSLCSS*WSWEWL
Trigger: AAGCCACTCCCAACTCCACAAAGATGAGCATAGTGA...TCGCCCAGCACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp GAACATTCTGCTGCCTGGAAACTCAGTTCAAACATTCAGGAGGATTaGCTCCAAGGAGGAGGTTCGTGGCTACATCCCAAGGCAGATAGC +
Preference number: 5 (lower is better)
Translates to: EHSAAWKLSSNIQED*LQGGGSWLHPKADS
Trigger: GCTATCTGCCTTGGGATGTAGCCACGAACCTCCTCCTTGGAGCCAATCCTCCTGAATGTTTGAACTGAGTTTCCAGGCAGCAGAATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS TCA 90 bp CTCTTCAGACATGAGAATGCCTCTCAGCCTCACCTCCTCAGTGACTaGATTGGAATAATGACAGTGGCTCCTGTCCCTTTAACCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LFRHENASQPHLLSD*IGIMTVAPVPLTQD
Trigger: GTCCTGGGTTAAAGGGACAGGAGCCACTGTCATTATTCCAATTCAGTCACTGAGGAGGTGAGGCTGAGAGGCATTCTCATGTCTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS-3UTR CAA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGCTATCACCAGCATCTaGGAGGGCAGGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDAITSI*EGRVSL
Trigger: CAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAGC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS-3UTR CAA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTACAACTGCTGAATGTTaGAAAGCCTTCTGGGGAACC +
Preference number: 5 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGTTAEC*KAFWGT
Trigger: GGTTCCCCAGAAGGCTTTCAAACATTCAGCAGTTGT...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS TCA 90 bp CTTGCTCACAACTCTATACTCAGCATTAGACTGGGTGCCTGGCACTaGATGACAACTGCTGAATGTTTGAAAGCCTTCTGGGGAACCACG +
Preference number: 5 (lower is better)
Translates to: LAHNSILSIRLGAWH*MTTAECLKAFWGTT
Trigger: CGTGGTTCCCCAGAAGGCTTTCAAACATTCAGCAGTTGTCATTCAGTGCCAGGCACCCAGTCTAATGCTGAGTATAGAGTTGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 90 bp AGCCTTCTGGGGAACCACGAACCAACTAAACTGCAGCCTTCACTATaGTCATCTTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATT +
Preference number: 5 (lower is better)
Translates to: SLLGNHEPTKLQPSL*SSLWSWEWLFIHGI
Trigger: AATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGTGGTTCCCCAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp AAATGTCAAGGACTGACATTTGATGCCATTATCCCCAGTCAGCATACAGATGACGCAAACTCCGTGCCCTaGGCCTCATTGGTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KCQGLTFDAIIPSQHTDDANSVP*ASLVWY
Trigger: GTACCACACCAATGAGGCCAAGGGCACGGAGTTTGC...GTCATCTGTATGCTGACTGGGGATAATGGCATCAAATGTCAGTCCTTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS TCA 90 bp CACCAGCATCATGTGACTCCCAGTGCCAGTGACATCTGGAGGAATTaGGCAATGGCTGAGGTGGAATTTCATTTGGCACTTAATGCAATC +
Preference number: 5 (lower is better)
Translates to: HQHHVTPSASDIWRN*AMAEVEFHLALNAI
Trigger: GATTGCATTAAGTGCCAAATGAAATTCCACCTCAGCCATTGCTCAATTCCTCCAGATGTCACTGGCACTGGGAGTCACATGATGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 90 bp GCTGAATGTTTGAAAGCCTTCTGGGGAACCACGAACCAACTAAACTaGAGCCTTCACTATGCTCATCTTTGTGGAGTTGGGAGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: AECLKAFWGTTNQLN*SLHYAHLCGVGSGF
Trigger: AAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGTGGTTCCCCAGAAGGCTTTCAAACATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp ATCTCGGGAAGAATCAAGTGCTCTCTCTCTCTGTCTGGTGGTATCAGCAGGGGTTTTCATCCATGGGATTaGCCATTGGCTACAGTCATT +
Preference number: 5 (lower is better)
Translates to: ISGRIKCSLSLSGGISRGFHPWD*PLATVI
Trigger: AATGACTGTAGCCAATGGCAAATCCCATGGATGAAA...ACCCCTGCTGATACCACCAGACAGAGAGAGAGAGCACTTGATTCTTCCCGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS TCA 90 bp TTTCATTTGGCACTTAATGCAATCCTCTGCTTCTGCCAGAGGCGGTaGATTCTATATAAAGCTGCCAAACCTGGCCGTCTTCTCACTGAG +
Preference number: 5 (lower is better)
Translates to: FHLALNAILCFCQRR*ILYKAAKPGRLLTE
Trigger: CTCAGTGAGAAGACGGCCAGGTTTGGCAGCTTTATATAGAATTCACCGCCTCTGGCAGAAGCAGAGGATTGCATTAAGTGCCAAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 90 bp TGCTCATCTTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTTaGCATTGGCTACAGTCATTCCTACTAACTCTCTATGTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CSSLWSWEWLFIHGI*HWLQSFLLTLYVLR
Trigger: CCTGAGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp GAACCAACTAAACTGCAGCCTTCACTATGCTCATCTTTGTGGAGTTaGGAGTGGCTTTTCATCCATGGGATTTGCCATTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: EPTKLQPSLCSSLWS*EWLFIHGICHWLQS
Trigger: TGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp AACCACGAACCAACTAAACTGCAGCCTTCACTATGCTCATCTTTGTaGAGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATTGGCTA +
Preference number: 5 (lower is better)
Translates to: NHEPTKLQPSLCSSL*SWEWLFIHGICHWL
Trigger: TAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS-3UTR CAA 90 bp TACATTTCAAATTTATTTCCAATCGTTCTGAGCTGGATCAATGGCAGACAAAGGGCTATCACCAGCATCTaGGAGGGCAGGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: YISNLFPIVLSWINGRQRAITSI*EGRVSL
Trigger: CAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAGC...CCTTTGTCTGCCATTGATCCAGCTCAGAACGATTGGAAATAAATTTGAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS TCA 90 bp GATGGCTTCAGACTAGAACACCTAGGTGTTCTGGGAGGAGGAAGATaGTTTCAGCCTCAAAATCATGACAGGAAATGCAGGTGTTTCATG +
Preference number: 5 (lower is better)
Translates to: DGFRLEHLGVLGGGR*FQPQNHDRKCRCFM
Trigger: CATGAAACACCTGCATTTCCTGTCATGATTTTGAGGCTGAAATCATCTTCCTCCTCCCAGAACACCTAGGTGTTCTAGTCTGAAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp TCTTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATTaGCTACAGTCATTCCTACTAACTCTCTATGTCCTCAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: SLWSWEWLFIHGICH*LQSFLLTLYVLRMS
Trigger: TGACATCCTGAGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp ACTAAACTGCAGCCTTCACTATGCTCATCTTTGTGGAGTTGGGAGTaGCTTTTCATCCATGGGATTTGCCATTGGCTACAGTCATTCCTA +
Preference number: 5 (lower is better)
Translates to: TKLQPSLCSSLWSWE*LFIHGICHWLQSFL
Trigger: TAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 90 bp TACTGTTTGTTTGGTTTTGTATTTAGAGCGTGCTTGTTGGCCCACTaGGTATGCTCAGTTACTGGAAGATGTTTTGGCTGTGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: YCLFGFVFRACLLAH*VCSVTGRCFGCGLR
Trigger: TCTGAGGCCACAGCCAAAACATCTTCCAGTAACTGAGCATACCCAGTGGGCCAACAAGCACGCTCTAAATACAAAACCAAACAAACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp CGCCGTGCTGTTGGGGCTTCTCGTCGACCACATTCCTaGGCGTCAGCCCGGGCAGAGACCGCGGGGACTGGC +
Preference number: 6 (lower is better)
Translates to: RRAVGASRRPHS*ASARAETAGTG
Trigger: GCCAGTCCCCGCGGTCTCTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
ENST00000459787.1
ENST00000484700.2
CDS CAA 90 bp GCCATCCCCGGATCAGGCTCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAGCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: AIPGSGSRLRGHAVL*GLLVDHIPGRQPGQ
Trigger: CTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATCCGGGGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259254.9
CDS CAA 90 bp GGGGGTCCTTGGAGACTTCCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAGCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: GGPWRLPRLRGHAVL*GLLVDHIPGRQPGQ
Trigger: CTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGGAAGTCTCCAAGGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp GACATCCCTGGATCAGGCTCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAGCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: DIPGSGSRLRGHAVL*GLLVDHIPGRQPGQ
Trigger: CTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATCCAGGGATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409836.3
CDS GCA 72 bp CACCCCTGGAGGCAGCGGGGCACACAGGCACAACCCTaGAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: HPWRQRGTQAQP*SAGSALCFSWQ
Trigger: CTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTGCCTGTGTGCCCCGCTGCCTCCAGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp TGTCCCTTTAACCCAGGACCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAGCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: CPFNPGPRLRGHAVL*GLLVDHIPGRQPGQ
Trigger: CTGCCCGGGCTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGGTCCTGGGTTAAAGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 72 bp GGATCAGGCTCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: GSGSRLRGHAVL*GLLVDHIPGRQ
Trigger: CTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGAGCCTGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000409836.3
CDS CAA 72 bp AACCCAGGACCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: NPGPRLRGHAVL*GLLVDHIPGRQ
Trigger: CTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGGTCCTGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 72 bp TGGAGACTTCCGAGGCTGAGAGGCCACGCCGTGCTGTaGGGGCTTCTCGTCGACCACATTCCTGGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: WRLPRLRGHAVL*GLLVDHIPGRQ
Trigger: CTGACGCCCAGGAATGTGGTCGACGAGAAGCCCCAACAGCACGGCGTGGCCTCTCAGCCTCGGAAGTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 72 bp GCTCCCCAGGGAGCTCTGCAAGTCCCCAGAAATACTTaGCCAACCACGGGCACCCTTGGAAGGGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: APQGALQVPRNT*PTTGTLGRVQL
Trigger: CAGCTGGACCCTTCCAAGGGTGCCCGTGGTTGGGCAAGTATTTCTGGGGACTTGCAGAGCTCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp CTGCATTCTCCCTACTCAGGCCGGCCAGAGGCACACTaGCTCTGTATGAGCCAGAGGCACACAGGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LHSPYSGRPEAH*LCMSQRHTGSV
Trigger: CACTGAGCCTGTGTGCCTCTGGCTCATACAGAGCCAGTGTGCCTCTGGCCGGCCTGAGTAGGGAGAATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS GCA 72 bp CTGCTATCACCAGCATCTTGGAGGGCAGGGTCTCCCTaGAGGGCTGCATCTGCACTCTCAGCAAACTCCGTG +
Preference number: 6 (lower is better)
Translates to: LLSPASWRAGSP*RAASALSANSV
Trigger: CACGGAGTTTGCTGAGAGTGCAGATGCAGCCCTGCAGGGAGACCCTGCCCTCCAAGATGCTGGTGATAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS CCA 72 bp CAACCCTGCAGTGCGGGCAGTGCTCTCTGCTTCAGTTaGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCT +
Preference number: 6 (lower is better)
Translates to: QPCSAGSALCFS*QLECSCWGAEP
Trigger: AGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS TCA 72 bp CAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTaGGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: QCGQCSLLQLAA*VQLLGCRTSVA
Trigger: TGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 72 bp GCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTTGAGTaGAGCTGTTGGGGTGCAGAACCTCAGTTGCAATGG +
Preference number: 6 (lower is better)
Translates to: AGSALCFSWQLE*SCWGAEPQLQW
Trigger: CCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp CACAACCCTGCAGTGCGGGCAGTGCTCTCTGCTTCAGTTGGCAGCTaGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCAATGGATTC +
Preference number: 6 (lower is better)
Translates to: HNPAVRAVLSASVGS*SAAVGVQNLSCNGF
Trigger: GAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAAGCAGAGAGCACTGCCCGCACTGCAGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 72 bp GACATCCCTGGATCAGGCTCTGCAATGGTGGTAGTATaGATTGTGGTGGAGGCAGAGGCCATCCCCGGATCA +
Preference number: 6 (lower is better)
Translates to: DIPGSGSAMVVV*IVVEAEAIPGS
Trigger: TGATCCGGGGATGGCCTCTGCCTCCACCACAATGCATACTACCACCATTGCAGAGCCTGATCCAGGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259254.9
ENST00000356887.12
CDS GCA 72 bp CAATGTCCATTATGGTGGGGGTGGAGGTCTCCATTCTaGCATCCGGCCATCCAGACATCCCTGGATCAGGCT +
Preference number: 6 (lower is better)
Translates to: QCPLWWGWRSPF*HPAIQTSLDQA
Trigger: AGCCTGATCCAGGGATGTCTGGATGGCCGGATGGCAGAATGGAGACCTCCACCCCCACCATAATGGACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259254.9
ENST00000356887.12
ENST00000409836.3
CDS CAA 90 bp CACTGCAGATGGGTTCACTTGTTCCCACCACAAGCGCAGAATGCCTaGTACTTCACAACCCTTTGCTCCCCAGGGAGCTCTGCAAGTCCC +
Preference number: 6 (lower is better)
Translates to: HCRWVHLFPPQAQNA*YFTTLCSPGSSASP
Trigger: GGGACTTGCAGAGCTCCCTGGGGAGCAAAGGGTTGTGAAGTACAAGGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS TCA 72 bp AAAGCTGCCAAACCTGGCCGTCTTCTCACTGAGCCTTaGCCCCTTCCATCCAAGGGCAAGGCAATGGATTGC +
Preference number: 6 (lower is better)
Translates to: KAAKPGRLLTEP*PLPSKGKAMDC
Trigger: GCAATCCATTGCCTTGCCCTTGGATGGAAGGGGTCAAGGCTCAGTGAGAAGACGGCCAGGTTTGGCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 72 bp CTTGTACTTCACAACCCTTTGCTCCCCAGGGAGCTCTaGAAGTCCCCAGAAATACTTGCCCAACCACGGGCA +
Preference number: 6 (lower is better)
Translates to: LVLHNPLLPREL*KSPEILAQPRA
Trigger: TGCCCGTGGTTGGGCAAGTATTTCTGGGGACTTGCAGAGCTCCCTGGGGAGCAAAGGGTTGTGAAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 72 bp CTCTCACCTCTGTTGAGGGGACCTCTTCCTACTCACTaGAGATGGGTTCACTTGTTCCCACCACAAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LSPLLRGPLPTH*RWVHLFPPQAQ
Trigger: CTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp GTGGGCTGGTCTTTACATTTCCCGGCCCATCTCCTATaGCTCCCCTCTGCCATAGGAGTTGTTGAAGGGGTT +
Preference number: 6 (lower is better)
Translates to: VGWSLHFPAHLL*LPSAIGVVEGV
Trigger: AACCCCTTCAACAACTCCTATGGCAGAGGGGAGCCATAGGAGATGGGCCGGGAAATGTAAAGACCAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 72 bp CAATGGATTCTCAGGGCCAGTGGTATTTTTCAGATGTaGACGGAGAGCAGGGGTCAGGTGCTAGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: QWILRASGIFQM*TESRGQVLALR
Trigger: CCTCAGGGCTAGCACCTGACCCCTGCTCTCCGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 72 bp AACATTCAGGAGGATTGGCTCCAAGGAGGAGGTTCGTaGCTACATCCCAAGGCAGATAGCCGTGCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: NIQEDWLQGGGS*LHPKADSRASP
Trigger: TGGGGAAGCACGGCTATCTGCCTTGGGATGTAGCCACGAACCTCCTCCTTGGAGCCAATCCTCCTGAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS CCA 72 bp CCTCTGTTGAGGGGACCTCTTCCTACTCACTGCAGATaGGTTCACTTGTTCCCACCACAAGCGCAGAATGCC +
Preference number: 6 (lower is better)
Translates to: PLLRGPLPTHCR*VHLFPPQAQNA
Trigger: GGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp CAGGTCTGCCACCTGAAGAGGCAAACTGACTTGACTTaGCCCAACCTCTCACCTCTGTTGAGGGGACCTCTT +
Preference number: 6 (lower is better)
Translates to: QVCHLKRQTDLT*PNLSPLLRGPL
Trigger: AAGAGGTCCCCTCAACAGAGGTGAGAGGTTGGGCCAAGTCAAGTCAGTTTGCCTCTTCAGGTGGCAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 72 bp CAGATGGGTTCACTTGTTCCCACCACAAGCGCAGAATaGCTTGTACTTCACAACCCTTTGCTCCCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: QMGSLVPTTSAE*LVLHNPLLPRE
Trigger: CTCCCTGGGGAGCAAAGGGTTGTGAAGTACAAGGCATTCTGCGCTTGTGGTGGGAACAAGTGAACCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp AGCGTGCTTGTTGGCCCACTGGGTATGCTCAGTTACTaGAAGATGTTTTGGCTGTGGCCTCAGACAGGCACT +
Preference number: 6 (lower is better)
Translates to: SVLVGPLGMLSY*KMFWLWPQTGT
Trigger: AGTGCCTGTCTGAGGCCACAGCCAAAACATCTTCCAGTAACTGAGCATACCCAGTGGGCCAACAAGCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 72 bp CCGAAGTCTAATGTGGAATGGCTTGCAAGCAAGGGCTaGACCGCTGTTTGTCTCCCAAGGCAAGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: PKSNVEWLASKG*TAVCLPRQVLK
Trigger: CTTCAACACTTGCCTTGGGAGACAAACAGCGGTGCAGCCCTTGCTTGCAAGCCATTCCACATTAGACTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp GCTGCCTGGAAACTCAGTTCAAACATTCAGGAGGATTaGCTCCAAGGAGGAGGTTCGTGGCTACATCCCAAG +
Preference number: 6 (lower is better)
Translates to: AAWKLSSNIQED*LQGGGSWLHPK
Trigger: CTTGGGATGTAGCCACGAACCTCCTCCTTGGAGCCAATCCTCCTGAATGTTTGAACTGAGTTTCCAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS CAA 72 bp TGTGGAATGGCTTGCAAGCAAGGGCTGCACCGCTGTTaGTCTCCCAAGGCAAGTGTTGAAGGTCTGAAACCT +
Preference number: 6 (lower is better)
Translates to: CGMACKQGLHRC*SPKASVEGLKP
Trigger: AGGTTTCAGACCTTCAACACTTGCCTTGGGAGACAAACAGCGGTGCAGCCCTTGCTTGCAAGCCATTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 72 bp CAAACTGACTTGACTTGGCCCAACCTCTCACCTCTGTaGAGGGGACCTCTTCCTACTCACTGCAGATGGGTT +
Preference number: 6 (lower is better)
Translates to: QTDLTWPNLSPL*RGPLPTHCRWV
Trigger: AACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAGGTTGGGCCAAGTCAAGTCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 90 bp CTGAAGAGGCAAACTGACTTGACTTGGCCCAACCTCTCACCTCTGTaGAGGGGACCTCTTCCTACTCACTGCAGATGGGTTCACTTGTTC +
Preference number: 6 (lower is better)
Translates to: LKRQTDLTWPNLSPL*RGPLPTHCRWVHLF
Trigger: GAACAAGTGAACCCATCTGCAGTGAGTAGGAAGAGGTCCCCTCAACAGAGGTGAGAGGTTGGGCCAAGTCAAGTCAGTTTGCCTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 90 bp TTCAGTTGGCAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTaGCAATGGATTCTCAGGGCCAGTGGTATTTTTCAGATGTGGACG +
Preference number: 6 (lower is better)
Translates to: FSWQLECSCWGAEPQ*QWILRASGIFQMWT
Trigger: CGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTGCCAACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp CAGGGATCCTGCCATAAATCAATCCGAAGTCTAATGTGGAATGGCTaGCAAGCAAGGGCTGCACCGCTGTTTGTCTCCCAAGGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: QGSCHKSIRSLMWNG*QARAAPLFVSQGKC
Trigger: ACACTTGCCTTGGGAGACAAACAGCGGTGCAGCCCTTGCTTGCAAGCCATTCCACATTAGACTTCGGATTGATTTATGGCAGGATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS TCA 72 bp GATGTACATACAGGTCTGCCACCTGAAGAGGCAAACTaGCTTGACTTGGCCCAACCTCTCACCTCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: DVHTGLPPEEAN*LDLAQPLTSVE
Trigger: CTCAACAGAGGTGAGAGGTTGGGCCAAGTCAAGTCAGTTTGCCTCTTCAGGTGGCAGACCTGTATGTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp TGCAGAACCTCAGTTGCAATGGATTCTCAGGGCCAGTaGTATTTTTCAGATGTGGACGGAGAGCAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: CRTSVAMDSQGQ*YFSDVDGEQGS
Trigger: TGACCCCTGCTCTCCGTCCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 72 bp GAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTGCAATaGATTCTCAGGGCCAGTGGTATTTTTCAGATGTGG +
Preference number: 6 (lower is better)
Translates to: ECSCWGAEPQLQ*ILRASGIFQMW
Trigger: CCACATCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 72 bp CAGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTaGCAATGGATTCTCAGGGCCAGTGGTATTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QLECSCWGAEPQ*QWILRASGIFQ
Trigger: CTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 72 bp TGCTGCCTGGAAACTCAGTTCAAACATTCAGGAGGATaGGCTCCAAGGAGGAGGTTCGTGGCTACATCCCAA +
Preference number: 6 (lower is better)
Translates to: CCLETQFKHSGG*APRRRFVATSQ
Trigger: TTGGGATGTAGCCACGAACCTCCTCCTTGGAGCCAATCCTCCTGAATGTTTGAACTGAGTTTCCAGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459787.1
CDS GCA 72 bp AGCTTGAGTGCAGCTGTTGGGGTGCAGAACCTCAGTTaGAATGGATTCTCAGGGCCAGTGGTATTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: SLSAAVGVQNLS*NGFSGPVVFFR
Trigger: TCTGAAAAATACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCACTCAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp GGGAACCACGAACCAACTAAACTGCAGCCTTCACTATGCTCATCTTaGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: GNHEPTKLQPSLCSS*WSWEWLFIHGICHW
Trigger: CCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGTGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS TCA 72 bp CATGAGAATGCCTCTCAGCCTCACCTCCTCAGTGACTaGATTGGAATAATGACAGTGGCTCCTGTCCCTTTA +
Preference number: 6 (lower is better)
Translates to: HENASQPHLLSD*IGIMTVAPVPL
Trigger: TAAAGGGACAGGAGCCACTGTCATTATTCCAATTCAGTCACTGAGGAGGTGAGGCTGAGAGGCATTCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS GCA 72 bp TTGAAAGCCTTCTGGGGAACCACGAACCAACTAAACTaGAGCCTTCACTATGCTCATCTTTGTGGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: LKAFWGTTNQLN*SLHYAHLCGVG
Trigger: CCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTCGTGGTTCCCCAGAAGGCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 72 bp TTTGTATTTAGAGCGTGCTTGTTGGCCCACTGGGTATaGTCAGTTACTGGAAGATGTTTTGGCTGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: FVFRACLLAHWV*SVTGRCFGCGL
Trigger: GAGGCCACAGCCAAAACATCTTCCAGTAACTGAGCATACCCAGTGGGCCAACAAGCACGCTCTAAATACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp CAGCCTTCACTATGCTCATCTTTGTGGAGTTGGGAGTaGCTTTTCATCCATGGGATTTGCCATTGGCTACAG +
Preference number: 6 (lower is better)
Translates to: QPSLCSSLWSWE*LFIHGICHWLQ
Trigger: CTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 72 bp TGCCATAAATCAATCCGAAGTCTAATGTGGAATGGCTaGCAAGCAAGGGCTGCACCGCTGTTTGTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: CHKSIRSLMWNG*QARAAPLFVSQ
Trigger: TTGGGAGACAAACAGCGGTGCAGCCCTTGCTTGCAAGCCATTCCACATTAGACTTCGGATTGATTTATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CCA 72 bp CCAACTAAACTGCAGCCTTCACTATGCTCATCTTTGTaGAGTTGGGAGTGGCTTTTCATCCATGGGATTTGC +
Preference number: 6 (lower is better)
Translates to: PTKLQPSLCSSL*SWEWLFIHGIC
Trigger: GCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp ATCTTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATaGGCTACAGTCATTCCTACTAACTCTCTATGTCCTCAGGATGTC +
Preference number: 6 (lower is better)
Translates to: IFVELGVAFHPWDLP*ATVIPTNSLCPQDV
Trigger: GACATCCTGAGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 90 bp ATGCTCATCTTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTaGCCATTGGCTACAGTCATTCCTACTAACTCTCTATGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: MLIFVELGVAFHPWD*PLATVIPTNSLCPQ
Trigger: CTGAGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 72 bp AGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATTaGCTACAGTCATTCCTACTAACTCTCTATGTCCTC +
Preference number: 6 (lower is better)
Translates to: SWEWLFIHGICH*LQSFLLTLYVL
Trigger: GAGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 72 bp GAGTTGGGAGTGGCTTTTCATCCATGGGATTTGCCATaGGCTACAGTCATTCCTACTAACTCTCTATGTCCT +
Preference number: 6 (lower is better)
Translates to: ELGVAFHPWDLP*ATVIPTNSLCP
Trigger: AGGACATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CAA 72 bp GAACCAACTAAACTGCAGCCTTCACTATGCTCATCTTaGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATT +
Preference number: 6 (lower is better)
Translates to: EPTKLQPSLCSS*WSWEWLFIHGI
Trigger: AATCCCATGGATGAAAAGCCACTCCCAACTCCACAAAGATGAGCATAGTGAAGGCTGCAGTTTAGTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS GCA 72 bp TTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTTaGCATTGGCTACAGTCATTCCTACTAACTCTCTAT +
Preference number: 6 (lower is better)
Translates to: LWSWEWLFIHGI*HWLQSFLLTLY
Trigger: ATAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12
CDS CCA 72 bp TTTGGTTTTGTATTTAGAGCGTGCTTGTTGGCCCACTaGGTATGCTCAGTTACTGGAAGATGTTTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: FGFVFRACLLAH*VCSVTGRCFGC
Trigger: ACAGCCAAAACATCTTCCAGTAACTGAGCATACCCAGTGGGCCAACAAGCACGCTCTAAATACAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484700.2
CDS CAA 72 bp TTTGTGGAGTTGGGAGTGGCTTTTCATCCATGGGATTaGCCATTGGCTACAGTCATTCCTACTAACTCTCTA +
Preference number: 6 (lower is better)
Translates to: FVELGVAFHPWD*PLATVIPTNSL
Trigger: TAGAGAGTTAGTAGGAATGACTGTAGCCAATGGCAAATCCCATGGATGAAAAGCCACTCCCAACTCCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356887.12