RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GYG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000056998

Ensembl transcript IDs: ENST00000353656.10, ENST00000381157.2, ENST00000381161.5, ENST00000381163.7, ENST00000398806.8, ENST00000453106.1, ENST00000469234.6, ENST00000639373.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCTGACTCACCTGAAATATCCTACGAGCCTCGCCCTCCGAGACTaGCGATTATTAACCACCCACACGGAAAAAGAAACAGCCCCTCCA +
Preference number: 1 (lower is better)
Translates to: TLTHLKYPTSLALRD*RLLTTHTEKETAPP
Trigger: TGGAGGGGCTGTTTCTTTTTCCGTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTCAGGTGAGTCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR GCA 90 bp AGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTaGACCCTGACTTTTGTTGTCAAGCAGAGAGCATCTCTAGATCCT +
Preference number: 1 (lower is better)
Translates to: SEGRDQAKSSQGWTD*TLTFVVKQRASLDP
Trigger: AGGATCTAGAGATGCTCTCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 90 bp GGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCTCCACGCAACAGGACCACCCAACAG +
Preference number: 1 (lower is better)
Translates to: GLSINRGTRFNSVSL*KDQRRSPRNRTTQQ
Trigger: CTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 90 bp TCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCAAGCCAC +
Preference number: 1 (lower is better)
Translates to: SKRFRASPRCFSTRK*IGLDPLSHPHSPSH
Trigger: GTGGCTTGGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR GCA 90 bp GCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCTTCAAGGGTAGAAGTGACCTCTGAA +
Preference number: 1 (lower is better)
Translates to: ARAETTIESLLECYY*SLLPTASRVEVTSE
Trigger: TTCAGAGGTCACTTCTACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR CCA 90 bp CCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTaGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAACATGAA +
Preference number: 1 (lower is better)
Translates to: PNEMIQARMHGGIPD*THSISQLITAREHE
Trigger: TTCATGTTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 90 bp GACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACAGAA +
Preference number: 1 (lower is better)
Translates to: DHSRGVSQIHFAKSK*KSVTTSKCFLSPTE
Trigger: TTCTGTAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 90 bp ACGTATATTAGTGTTGTTAGCTTCGTGATGGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGGGTAGGTCTCACAGCACCTGTACAA +
Preference number: 1 (lower is better)
Translates to: TYISVVSFVMGGNLQ*GLILNRVGLTAPVQ
Trigger: TTGTACAGGTGCTGTGAGACCTACCCTATTCAGAATTAAACCTCACTGCAAATTTCCTCCCATCACGAAGCTAACAACACTAATATACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR GCA 90 bp CTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTaGATGAGAAATAAACCTTCCAAACATTTCAAAAGTCGCACTTTC +
Preference number: 1 (lower is better)
Translates to: LPIPSLIYSLLFPGM*MRNKPSKHFKSRTF
Trigger: GAAAGTGCGACTTTTGAAATGTTTGGAAGGTTTATTTCTCATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCCCAGAAGGCGTTGGTaGAGAAGTTGGGGCGAGGGG +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARPRRRW*RSWGEG
Trigger: CCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCAAGCCCAGAAGGCGTTaGTGGAGAAGTTGGGGCGAG +
Preference number: 2 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTKPRRR*WRSWGE
Trigger: CTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTT...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCTCGCCCTCCGAGACTaGCGATTATTAACCACCCAC +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARLALRD*RLLTTH
Trigger: GTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAAAGCCCAGAAGGCGTTaGTGGAGAAGTTGGGGCGAG +
Preference number: 2 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRKPRRR*WRSWGE
Trigger: CTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGGACCGACTGCACCCTaGCTTTTGTTGTCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARGPTAP*LLLSSR
Trigger: TCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCC...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACT +
Preference number: 2 (lower is better)
Translates to: EISYEPRPPRLTIINHPHKSSQG*TDCTLT
Trigger: AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTT...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCT +
Preference number: 2 (lower is better)
Translates to: KAQKALVEKLGRGALRWINSVSL*KDQRRS
Trigger: AGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTT...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAACTGACATTGTTTCCCTaGACATTCCCGTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GGIPDWTHSISQLITARELTLFP*TFPWSP
Trigger: AGGAGACCACGGGAATGTTCAGGGAAACAATGTCAG...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGGTCCTCAGAGAAGCTaGCATTGTTTCCCTGAACAT +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARGPQRS*HCFPEH
Trigger: ATGTTCAGGGAAACAATGTCAGCTTCTCTGAGGACC...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCGAGGGGCTTTAAGGTaGATTTCTATACTCTACGTT +
Preference number: 2 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTRGALR*ISILYV
Trigger: AACGTAGAGTATAGAAATCCACCTTAAAGCCCCTCG...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAAGAAATGGGTCTCCATaGCAAAGCCTCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: GGIPDWTHSISQLITARERNGSP*QSLRGA
Trigger: AGCACCTCTGAGGCTTTGCCATGGAGACCCATTTCT...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACT +
Preference number: 2 (lower is better)
Translates to: IQARMHGGIPDWTHSISQKSSQG*TDCTLT
Trigger: AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGG +
Preference number: 2 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTGGNLQ*GLILNR
Trigger: CCTATTCAGAATTAAACCTCACTGCAAATTTCCTCC...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACGAGGGGCTTTAAGGTaGATTTCTATACTCTACGTT +
Preference number: 2 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPRGALR*ISILYV
Trigger: AACGTAGAGTATAGAAATCCACCTTAAAGCCCCTCG...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTTTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTA +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARFSTRK*IGLDPL
Trigger: TAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAA...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAGGTCCTCAGAGAAGCTaGCATTGTTTCCCTGAACAT +
Preference number: 2 (lower is better)
Translates to: IQARMHGGIPDWTHSISQGPQRS*HCFPEH
Trigger: ATGTTCAGGGAAACAATGTCAGCTTCTCTGAGGACC...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR CAA 90 bp GAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTAGAAGTGACCTCTGAAGAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: ETTIESLLECYYCSL*PTASRVEVTSEESP
Trigger: TGGGCTTTCTTCAGAGGTCACTTCTACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCT +
Preference number: 2 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMNSVSL*KDQRRS
Trigger: AGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTAGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: SPSPNESQSPRLNVSLALGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGG +
Preference number: 2 (lower is better)
Translates to: GGIPDWTHSISQLITAREGGNLQ*GLILNR
Trigger: CCTATTCAGAATTAAACCTCACTGCAAATTTCCTCC...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAGTGTTGTTAGCTTCGTaGTGGGAGGAAATTTGCAGT +
Preference number: 2 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGVLLAS*WEEICS
Trigger: ACTGCAAATTTCCTCCCATCACGAAGCTAACAACAC...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTAAACTGAGAATTCTCTaGAAAGAGCTGAGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: HGGIPDWTHSISQLITARKLRIL*KELSGN
Trigger: ATTTCCACTCAGCTCTTTCCAGAGAATTCTCAGTTT...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGATTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCT +
Preference number: 2 (lower is better)
Translates to: SCYPLNDLEQALVASQPGFAKSK*KSVTTS
Trigger: AGACGTGGTGACTGACTTTCATTTGGACTTGGCGAA...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGATTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTA +
Preference number: 2 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGFSTRK*IGLDPL
Trigger: TAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAA...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR GCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGACTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCT +
Preference number: 2 (lower is better)
Translates to: SCYPLNDLEQALVASQPGLECYY*SLLPTA
Trigger: AGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAG...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTTCTCTGGAAAGAGCTaGGTGGAAATGGCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: KVALSSFITTMPIFNDTLFSGKS*VEMALR
Trigger: CCTCAAAGCCATTTCCACTCAGCTCTTTCCAGAGAA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR GCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCT +
Preference number: 2 (lower is better)
Translates to: SPSPNESQSPRLNVSLALLECYY*SLLPTA
Trigger: AGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAG...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCAAACTGAGAATTCTCTaGAAAGAGCTGAGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: KVALSSFITTMPIFNDTLKLRIL*KELSGN
Trigger: ATTTCCACTCAGCTCTTTCCAGAGAATTCTCAGTTT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAGCGTTGGTGGAGAAGTaGGGGCGAGGGGCTTTAAGG +
Preference number: 3 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPALVEK*GRGALR
Trigger: CCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGC...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp AAAGTGGCCACGCCTCTCCACGTAAACACATCCAGCTaGCACAGGCTAGGATCGAGTTCTCCCACGGCCTTC +
Preference number: 3 (lower is better)
Translates to: KVATPLHVNTSS*HRLGSSSPTAF
Trigger: GAAGGCCGTGGGAGAACTCGATCCTAGCCTGTGTCAGCTGGATGTGTTTACGTGGAGAGGCGTGGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCCACCCAACAGGACATaGTCTAACTACACACAACGC +
Preference number: 3 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTPPNRT*SNYTQR
Trigger: GCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCAACAGCGTTTCCCTTaGAAAGGACCAGAGGAGATC +
Preference number: 3 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTQQRFP*KGPEEI
Trigger: GATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCTATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 3 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR CCA 72 bp AGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACTTTTGTTGTCAAGCAG +
Preference number: 3 (lower is better)
Translates to: SEGRDQAKSSQG*TDCTLTFVVKQ
Trigger: CTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCAACAGCGTTTCCCTTaGAAAGGACCAGAGGAGATC +
Preference number: 3 (lower is better)
Translates to: HGGIPDWTHSISQLITARQQRFP*KGPEEI
Trigger: GATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR GCA 72 bp AGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTaGACCCTGACTTTTGTTGTCAAGCAGAGAGCATCT +
Preference number: 3 (lower is better)
Translates to: RDQAKSSQGWTD*TLTFVVKQRAS
Trigger: AGATGCTCTCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAAAAGCCCAGAAGGCGTaGGTGGAGAAGTTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEKAQKA*VEKLGR
Trigger: TCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAATATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 3 (lower is better)
Translates to: GGIPDWTHSISQLITAREYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR CCA 72 bp ATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTaGACTCACTCCATAAGCCAACTCATCACTGCCCGT +
Preference number: 3 (lower is better)
Translates to: MIQARMHGGIPD*THSISQLITAR
Trigger: ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACCACCCAACAGGACATaGTCTAACTACACACAACGC +
Preference number: 3 (lower is better)
Translates to: IQARMHGGIPDWTHSISQPPNRT*SNYTQR
Trigger: GCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGG...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp ATAAATAGAGGCACAAGGTTCAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCTCCACGCAACAGGACC +
Preference number: 3 (lower is better)
Translates to: INRGTRFNSVSL*KDQRRSPRNRT
Trigger: GGTCCTGTTGCGTGGAGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTGAACCTTGTGCCTCTATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp TTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTAAGCCACCCACATTCC +
Preference number: 3 (lower is better)
Translates to: FRASPRCFSTRK*IGLDPLSHPHS
Trigger: GGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp CACCTGAAATATCCTACGAGCCTCGCCCTCCGAGACTaGCGATTATTAACCACCCACACGGAAAAAGAAACA +
Preference number: 3 (lower is better)
Translates to: HLKYPTSLALRD*RLLTTHTEKET
Trigger: TGTTTCTTTTTCCGTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAATATACTCTACGTTTTTaGTGTGAGGCACTCAAATGG +
Preference number: 3 (lower is better)
Translates to: GGIPDWTHSISQLITAREYTLRF*CEALKW
Trigger: CCATTTGAGTGCCTCACACAAAAAACGTAGAGTATA...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGTATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 3 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACCACCCAACAGGACATaGTCTAACTACACACAACGC +
Preference number: 3 (lower is better)
Translates to: SPSPNESQSPRLNVSLALPPNRT*SNYTQR
Trigger: GCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGG...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR GCA 72 bp GAGACCACCATCGAGAGTCTACTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCTTCAAGGGTAGAAGTG +
Preference number: 3 (lower is better)
Translates to: ETTIESLLECYY*SLLPTASRVEV
Trigger: CACTTCTACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR-3UTR CAA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCTATACTCTACGTTTTTaGTGTGAGGCACTCAAATGG +
Preference number: 3 (lower is better)
Translates to: SGDHHRESTRMLLLLAFAYTLRF*CEALKW
Trigger: CCATTTGAGTGCCTCACACAAAAAACGTAGAGTATA...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp CGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCTAAATGTTTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: RGVSQIHFAKSK*KSVTTSKCFLS
Trigger: GCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR TCA 72 bp AGTGTTGTTAGCTTCGTGATGGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGGGTAGGTCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: SVVSFVMGGNLQ*GLILNRVGLTA
Trigger: TGCTGTGAGACCTACCCTATTCAGAATTAAACCTCACTGCAAATTTCCTCCCATCACGAAGCTAACAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCTTCCGCGCTCTGGCTaGCTCGGCCCAGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTLPRSG*LGPEPA
Trigger: CGCCGGCTCTGGGCCGAGGCAGCCAGAGCGCGGAAG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTTGCGCCCGGGAGCAGTaGGTGGACTTCCTCGCCACG +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTCAREQ*VDFLAT
Trigger: CGTGGCGAGGAAGTCCACCCACTGCTCCCGGGCGCA...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTTGGCGCCGCGGGCAGTaGGCGCGGACCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARWRRGQ*ARTCRP
Trigger: AGGTCTGCAGGTCCGCGCCCACTGCCCGCGGCGCCA...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAATGGCGCCGCGGGCAGTaGGCGCGGACCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITAREWRRGQ*ARTCRP
Trigger: AGGTCTGCAGGTCCGCGCCCACTGCCCGCGGCGCCA...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR TCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGGCTGCTGGACGCTaGGCCTTGCTCCAACACCGA +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTLAAGR*ALLQHR
Trigger: TCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAG...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAGGCTCCGGAAGGCCCTaGGCAGGCTGGTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPGSGRP*AGWLEP
Trigger: GGGTTCTAACCAGCCTGCTCAGGGCCTTCCGGAGCC...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACCTTCCGCGCTCTGGCTaGCTCGGCCCAGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHLPRSG*LGPEPA
Trigger: CGCCGGCTCTGGGCCGAGGCAGCCAGAGCGCGGAAG...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCCTGGTGCTGGCTGCTaGACGCTGAGCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTPGAGC*TLSLAP
Trigger: TGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGG...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAGCCTCTTCCGCGCTCTaGCTGCCTCGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITAREASSAL*LPRPRA
Trigger: GGCTCTGGGCCGAGGCAGCCAGAGCGCGGAAGAGGC...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCCCAGAAGGCGTTGGTaGAGAAGTTGGGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTPRRRW*RSWGEG
Trigger: CCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGGACGCTGAGCCTTaGTCCAACACCGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTLDAEP*SNTEPL
Trigger: GAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAG...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTGTCTCATCCACTATCTaGGTCGGCTCCGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTVSSTI*VGSGRP
Trigger: GGGCCTTCCGGAGCCGACCCAGATAGTGGATGAGAC...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAACCGTCCACCAGAGATaGAGGAATGCCGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPTVHQR*RNAAWC
Trigger: GCACCAGGCGGCATTCCTTCATCTCTGGTGGACGGT...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATGGCTCCGGAAGGCCCTaGGCAGGCTGGTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYGSGRP*AGWLEP
Trigger: GGGTTCTAACCAGCCTGCTCAGGGCCTTCCGGAGCC...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAACCAGGAGACGCGCGTaGTTCCCCCGCTTGGACGCT +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRTRRRA*FPRLDA
Trigger: AGCGTCCAAGCGGGGGAAGCACGCGCGTCTCCTGGT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTACAACGCCCACCAGCTaGCGGATTACTGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTTTPTS*RITAGT
Trigger: GGTTCCTGCAGTAATCCGGCAGCTGGTGGGCGTTGT...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTCCCAGAAGGCGTTGGTaGAGAAGTTGGGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWIPRRRW*RSWGEG
Trigger: CCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGG...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCTCGCCCTCCGAGACTaGCGATTATTAACCACCCAC +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTLALRD*RLLTTH
Trigger: GTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCTGGTTTCAGTCTCTGTaGAGTCTGCAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTWFQSL*SLQAEG
Trigger: CCCCTCAGCCTGCAGACTTCACAGAGACTGAAACCA...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR GCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAAGGAATGCCGCCTGGTaGTGGCTGCTGGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRRNAAW*WLLDAE
Trigger: CTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATAGGAATGCCGCCTGGTaGTGGCTGCTGGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYRNAAW*WLLDAE
Trigger: CTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCT...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAAGGAATGCCGCCTGGTaGTGGCTGCTGGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARERNAAW*WLLDAE
Trigger: CTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCT...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCAGCTGCCGTGTTCCATaGCGTGCTGTAGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTSCRVP*RAVAGV
Trigger: AACTCCTGCTACAGCACGCCATGGAACACGGCAGCT...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCTGCGCCCGGGAGCAGTaGGTGGACTTCCTCGCCACG +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPCAREQ*VDFLAT
Trigger: CGTGGCGAGGAAGTCCACCCACTGCTCCCGGGCGCA...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR TCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACCTGGCTGCTGGACGCTaGGCCTTGCTCCAACACCGA +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHLAAGR*ALLQHR
Trigger: TCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAG...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAACCGTCCACCAGAGATaGAGGAATGCCGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARETVHQR*RNAAWC
Trigger: GCACCAGGCGGCATTCCTTCATCTCTGGTGGACGGT...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAACTGTGGCAAAGTGTGTaGCCAGGAGACGCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARELWQSV*PGDARA
Trigger: AGCACGCGCGTCTCCTGGTCACACACTTTGCCACAG...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAGGCTCCGGAAGGCCCTaGGCAGGCTGGTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQGSGRP*AGWLEP
Trigger: GGGTTCTAACCAGCCTGCTCAGGGCCTTCCGGAGCC...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCCGTGTTCCATGGCGTaGTGTAGCAGGAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTPCSMA*CSRSLC
Trigger: GCATAAACTCCTGCTACAGCACGCCATGGAACACGG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCCAGCTTCTCCTGGATaGGAGCAAACGCGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARPASPG*EQTRPS
Trigger: GGAAGGACGCGTTTGCTCGCATCCAGGAGAAGCTGG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCAAGGGTGGACCGACTaGACCCTGACTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTQGWTD*TLTFVV
Trigger: GACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTG...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTACCTCCAGTGCATCCTaGAGACTGGGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARTSSAS*RLGSLR
Trigger: TCTCAGGGACCCCAGTCTGCAGGATGCACTGGAGGT...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR GCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTACCTCCAGTGCATCCTaGAGACTGGGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWITSSAS*RLGSLR
Trigger: TCTCAGGGACCCCAGTCTGCAGGATGCACTGGAGGT...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACCCTGGTGCTGGCTGCTaGACGCTGAGCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHPGAGC*TLSLAP
Trigger: TGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGG...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATCGGTCCAGCTTCTCCTaGATGCGAGCAAACGCGTCC +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYRSSFS*MRANAS
Trigger: GGACGCGTTTGCTCGCATCCAGGAGAAGCTGGACCG...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACCCGGGAGCAGTGGGTaGACTTCCTCGCCACGAACC +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGPGSSG*TSSPRT
Trigger: GGTTCGTGGCGAGGAAGTCCACCCACTGCTCCCGGG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACACTCTGTCTCCGACATaGTCAGTGGCGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHTLSPT*SVAPRA
Trigger: TGCCCGCGGCGCCACTGACCATGTCGGAGACAGAGT...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381163.7
3UTR CAA 72 bp GGAGATCTCCACGCAACAGGACCACCCAACAGGACATaGTCTAACTACACACAACGCCCACCAGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GDLHATGPPNRT*SNYTQRPPAAG
Trigger: TCCGGCAGCTGGTGGGCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTGTAAACACATCCAGCTaGCACAGGCTAGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTVNTSS*HRLGSS
Trigger: ACTCGATCCTAGCCTGTGTCAGCTGGATGTGTTTAC...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATCTGCCCCGTCAAAGCTaGCGTGTTCCATGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYLPRQS*RVPWRA
Trigger: AGCACGCCATGGAACACGGCAGCTTTGACGGGGCAG...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGACCAGAGATGAAGGAATaGCGCCTGGTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRPEMKE*RLVLAA
Trigger: AGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGG...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCACCAGGAGACGCGCGTaGTTCCCCCGCTTGGACGCT +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFATRRRA*FPRLDA
Trigger: AGCGTCCAAGCGGGGGAAGCACGCGCGTCTCCTGGT...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATCCAGCTTCTCCTGGATaGGAGCAAACGCGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYPASPG*EQTRPS
Trigger: GGAAGGACGCGTTTGCTCGCATCCAGGAGAAGCTGG...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAAATGCCGCCTGGTGCTaGCTGCTGGACGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQNAAWC*LLDAEP
Trigger: AGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTACGGCACGCCCGCACTaGGTGTTGAATTTTCACACG +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWITARPH*VLNFHT
Trigger: CGTGTGAAAATTCAACACCCAGTGCGGGCGTGCCGT...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAACCCGGGAGCAGTGGGTaGACTTCCTCGCCACGAACC +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEPGSSG*TSSPRT
Trigger: GGTTCGTGGCGAGGAAGTCCACCCACTGCTCCCGGG...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAGGAAGGCTGGGACAGTaGGTCACACGTTATCACGGC +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITAREGRLGQ*VTRYHG
Trigger: GCCGTGATAACGTGTGACCCACTGTCCCAGCCTTCC...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR GCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTGCCCCGTCAAAGCTaGCGTGTTCCATGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQLPRQS*RVPWRA
Trigger: AGCACGCCATGGAACACGGCAGCTTTGACGGGGCAG...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCCTGCCCCGTCAAAGCTaGCGTGTTCCATGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPLPRQS*RVPWRA
Trigger: AGCACGCCATGGAACACGGCAGCTTTGACGGGGCAG...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTGGACGCTGAGCCTTaGTCCAACACCGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQLDAEP*SNTEPL
Trigger: GAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAG...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAAGCTGCCGTGTTCCATaGCGTGCTGTAGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRSCRVP*RAVAGV
Trigger: AACTCCTGCTACAGCACGCCATGGAACACGGCAGCT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTCACCGAGCCACTCTGTaGATTGTACTTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTHRATL*IVLVVP
Trigger: TGGAACTACAAGTACAATCCACAGAGTGGCTCGGTG...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAACCTGGTGCTGGCTGCTaGACGCTGAGCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEPGAGC*TLSLAP
Trigger: TGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGG...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCAATGCCGCCTGGTGCTaGCTGCTGGACGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFANAAWC*LLDAEP
Trigger: AGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATT...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAGTCTCATCCACTATCTaGGTCGGCTCCGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQVSSTI*VGSGRP
Trigger: GGGCCTTCCGGAGCCGACCCAGATAGTGGATGAGAC...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTTCGATGGAGATCTaGGAAACAGAGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWISSMEI*ETETAR
Trigger: CCTGGCCGTCTCTGTTTCCCAGATCTCCATCGAAGA...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACAAGCCCAGAAGGCGTTaGTGGAGAAGTTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHKPRRR*WRSWGE
Trigger: CTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTT...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACGGAAGGCTGGGACAGTaGGTCACACGTTATCACGGC +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHGRLGQ*VTRYHG
Trigger: GCCGTGATAACGTGTGACCCACTGTCCCAGCCTTCC...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGATCAGTCACCGACATaGTCAGTGGCGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMDQSPT*SVAPRA
Trigger: TGCCCGCGGCGCCACTGACCATGTCGGTGACTGATC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398806.8
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACAAACACCCCGCTATTaGAGCAATCCGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGQTPRY*SNPAIR
Trigger: CCGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCCAAACACCCCGCTATTaGAGCAATCCGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPQTPRY*SNPAIR
Trigger: CCGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTG...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCCTGTGGCAAAGTGTGTaGCCAGGAGACGCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFALWQSV*PGDARA
Trigger: AGCACGCGCGTCTCCTGGTCACACACTTTGCCACAG...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAGCCCGCACTGGGTGTTaGATTTTCACACGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGARTGC*IFTRLS
Trigger: GGAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGC...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPNSVSL*KDQRRS
Trigger: AGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTT...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATGGACCGACTGCACCCTaGCTTTTGTTGTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYGPTAP*LLLSSR
Trigger: TCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCC...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCATTCTCTGGAAAGAGCTaGGTGGAAATGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPFSGKS*VEMALR
Trigger: CCTCAAAGCCATTTCCACTCAGCTCTTTCCAGAGAA...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACCTCGCCCTCCGAGACTaGCGATTATTAACCACCCAC +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHLALRD*RLLTTH
Trigger: GTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAG...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGCTGGACGCTGAGCCTTaGTCCAACACCGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMLDAEP*SNTEPL
Trigger: GAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAG...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCCCAGAGATGAAGGAATaGCGCCTGGTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPPEMKE*RLVLAA
Trigger: AGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGG...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACAGCTGCCGGATTACTaGAGGAACCGGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGQLPDY*RNRSSF
Trigger: GAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAACAACGCCCACCAGCTaGCGGATTACTGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQTTPTS*RITAGT
Trigger: GGTTCCTGCAGTAATCCGGCAGCTGGTGGGCGTTGT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAACAACGCCCACCAGCTaGCGGATTACTGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTTTPTS*RITAGT
Trigger: GGTTCCTGCAGTAATCCGGCAGCTGGTGGGCGTTGT...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAAGGAGTTTATGCGTGTaGAGAGAAGGCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPRSLCV*REGWKT
Trigger: TGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCT...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATAGCTGCCGTGTTCCATaGCGTGCTGTAGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYSCRVP*RAVAGV
Trigger: AACTCCTGCTACAGCACGCCATGGAACACGGCAGCT...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACAACGGCAGGTGCTTGTaGATGTCTGTGGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHNGRCL*MSVVDQ
Trigger: CTGGTCGACCACAGACATCCACAAGCACCTGCCGTT...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGTCTCATCCACTATCTaGGTCGGCTCCGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMVSSTI*VGSGRP
Trigger: GGGCCTTCCGGAGCCGACCCAGATAGTGGATGAGAC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGCGGTCCAGCTTCTCCTaGATGCGAGCAAACGCGTCC +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMRSSFS*MRANAS
Trigger: GGACGCGTTTGCTCGCATCCAGGAGAAGCTGGACCG...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGACCCAGAAGGCGTTGGTaGAGAAGTTGGGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCYPLNDLEQALVASQPGPRRRW*RSWGEG
Trigger: CCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGG...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHKSSQG*TDCTLT
Trigger: AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTT...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYKSSQG*TDCTLT
Trigger: AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTT...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAAGGGAGTTCCTGGCTTaGTTCGAAGGTTTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRREFLA*FEGFLG
Trigger: TCCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
3UTR CAA 72 bp CCTCTGAAGAAAGCCCAGAAGGCGTTGGTGGAGAAGTaGGGGCGAGGGGCTTTAAGGTGGATTTCTATACTC +
Preference number: 4 (lower is better)
Translates to: PLKKAQKALVEK*GRGALRWISIL
Trigger: GAGTATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTTCTTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAGTGAGAGTCCAACAGTaGAGCTTGGTGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGVRVQQ*SLVRVS
Trigger: GCTCACCCTCACCAAGCTTCACTGTTGGACTCTCAC...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTACTTGCTGTAGTGAGTaGGAGTCCAACAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWITCCSE*ESNSEA
Trigger: AGCTTCACTGTTGGACTCTCACTCACTACAGCAAGT...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATTGGAACCGAATTGCTTaGAGGCAGGGCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYWNRIA*RQGCKC
Trigger: ACACTTACAGCCCTGCCTTCAAGCAATTCGGTTCCA...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTGCCCGCACTGGGTGTTaGATTTTCACACGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTARTGC*IFTRLS
Trigger: GGAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGC...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAGTTAGAACCCAGTGGTaGATTTGCACACGGCACGCC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQVRTQW*ICTRHA
Trigger: GGCGTGCCGTGTGCAAATTCACCACTGGGTTCTAAC...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACCCTTCTGAAAGCCGATaGCCATCCAACCCTGACTCA +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHPSESR*PSNPDS
Trigger: TGAGTCAGGGTTGGATGGTCATCGGCTTTCAGAAGG...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTACCAGGAGACGCGCGTaGTTCCCCCGCTTGGACGCT +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVTRRRA*FPRLDA
Trigger: AGCGTCCAAGCGGGGGAAGCACGCGCGTCTCCTGGT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGCCAGCTTCTCCTGGATaGGAGCAAACGCGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMPASPG*EQTRPS
Trigger: GGAAGGACGCGTTTGCTCGCATCCAGGAGAAGCTGG...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAACTATTCAGTAAGCCTTaGTCTGCCCCGTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARELFSKP*SAPSKL
Trigger: CAGCTTTGACGGGGCAGACCAAGGCTTACTGAATAG...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAAACGGCAGGTGCTTGTaGATGTCTGTGGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQNGRCL*MSVVDQ
Trigger: CTGGTCGACCACAGACATCCACAAGCACCTGCCGTT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCACCGAGCCACTCTGTaGATTGTACTTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARHRATL*IVLVVP
Trigger: TGGAACTACAAGTACAATCCACAGAGTGGCTCGGTG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAACGGCACGCCCGCACTaGGTGTTGAATTTTCACACG +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGTARPH*VLNFHT
Trigger: CGTGTGAAAATTCAACACCCAGTGCGGGCGTGCCGT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATGGCGGAATTCCAGACTaGACTCACTCCATAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYGGIPD*THSISQ
Trigger: TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTTGGTCGACCAGTTCCTaGAGAAACTATTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARWSTSS*RNYSVS
Trigger: GCTTACTGAATAGTTTCTTCAGGAACTGGTCGACCA...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCTGGCTGCTGGACGCTaGGCCTTGCTCCAACACCGA +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVLAAGR*ALLQHR
Trigger: TCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAGTTAGAACCCAGTGGTaGATTTGCACACGGCACGCC +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEVRTQW*ICTRHA
Trigger: GGCGTGCCGTGTGCAAATTCACCACTGGGTTCTAAC...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCGTTAGAACCCAGTGGTaGATTTGCACACGGCACGCC +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFAVRTQW*ICTRHA
Trigger: GGCGTGCCGTGTGCAAATTCACCACTGGGTTCTAAC...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATGTAAACACATCCAGCTaGCACAGGCTAGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYVNTSS*HRLGSS
Trigger: ACTCGATCCTAGCCTGTGTCAGCTGGATGTGTTTAC...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACCTTCTGAAAGCCGATaGCCATCCAACCCTGACTCA +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQPSESR*PSNPDS
Trigger: TGAGTCAGGGTTGGATGGTCATCGGCTTTCAGAAGG...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATCTGACATTGTTTCCCTaGACATTCCCGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYLTLFP*TFPWSP
Trigger: AGGAGACCACGGGAATGTTCAGGGAAACAATGTCAG...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACAGTGTGACAAAAGCCTaGTCAGTCACCGACATGGTC +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHSVTKA*SVTDMV
Trigger: GACCATGTCGGTGACTGATCAGGCTTTTGTCACACT...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398806.8
CDS-3UTR GCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACCGTGTTCCATGGCGTaGTGTAGCAGGAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTPCSMA*CSRSLC
Trigger: GCATAAACTCCTGCTACAGCACGCCATGGAACACGG...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AAAGCCCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTAAAGTGGACGACCTTTaGACTGGAACCGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: KAQKALVEKLGRGALRWIKVDDL*TGTELL
Trigger: AAGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTT...AATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGACAGCTGCCGGATTACTaGAGGAACCGGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SCYPLNDLEQALVASQPGQLPDY*RNRSSF
Trigger: GAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTG...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPLECYY*SLLPTA
Trigger: AGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAG...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACAAGGGTGGACCGACTaGACCCTGACTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTQGWTD*TLTFVV
Trigger: GACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTG...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACCTATTCAGTAAGCCTTaGTCTGCCCCGTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHLFSKP*SAPSKL
Trigger: CAGCTTTGACGGGGCAGACCAAGGCTTACTGAATAG...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGACACCGAGCCACTCTGTaGATTGTACTTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRHRATL*IVLVVP
Trigger: TGGAACTACAAGTACAATCCACAGAGTGGCTCGGTG...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTAAGAGCAGTCAAGGGTaGACCGACTGCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTKSSQG*TDCTLT
Trigger: AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTT...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACGGCGGAATTCCAGACTaGACTCACTCCATAAGCCAA +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHGGIPD*THSISQ
Trigger: TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACACTTGCTGTAGTGAGTaGGAGTCCAACAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHTCCSE*ESNSEA
Trigger: AGCTTCACTGTTGGACTCTCACTCACTACAGCAAGT...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATTACTCAAGTTATAGATaGACGGCAGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYYSSYR*TAGACG
Trigger: TCCACAAGCACCTGCCGTTCATCTATAACTTGAGTA...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCTGGAACCGAATTGCTTaGAGGCAGGGCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPWNRIA*RQGCKC
Trigger: ACACTTACAGCCCTGCCTTCAAGCAATTCGGTTCCA...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTAGCCCGCACTGGGTGTTaGATTTTCACACGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALARTGC*IFTRLS
Trigger: GGAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGC...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTGGACCGACTGCACCCTaGCTTTTGTTGTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTGPTAP*LLLSSR
Trigger: TCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCC...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCGGACCGACTGCACCCTaGCTTTTGTTGTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFAGPTAP*LLLSSR
Trigger: TCTGCTTGACAACAAAAGTCAGGGTGCAGTCGGTCC...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACTTCTCTGGAAAGAGCTaGGTGGAAATGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHFSGKS*VEMALR
Trigger: CCTCAAAGCCATTTCCACTCAGCTCTTTCCAGAGAA...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTTCCCTGGAATGTGCATaGGAAATAAACCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HGGIPDWTHSISQLITARSLECA*EINLPN
Trigger: GTTTGGAAGGTTTATTTCTCATGCACATTCCAGGGA...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACGGTCCTCAGAGAAGCTaGCATTGTTTCCCTGAACAT +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHGPQRS*HCFPEH
Trigger: ATGTTCAGGGAAACAATGTCAGCTTCTCTGAGGACC...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGATGGTTTCAGTCTCTGTaGAGTCTGCAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCYPLNDLEQALVASQPGWFQSL*SLQAEG
Trigger: CCCCTCAGCCTGCAGACTTCACAGAGACTGAAACCA...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR GCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACCAGAGATGAAGGAATaGCGCCTGGTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALPEMKE*RLVLAA
Trigger: AGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGG...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAACAAGGGTGGACCGACTaGACCCTGACTTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEQGWTD*TLTFVV
Trigger: GACAACAAAAGTCAGGGTGCAGTCGGTCCACCCTTG...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAACAGCTCATCGACATTaGACAGCACCAGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQTAHRH*TAPECL
Trigger: CAGACACTCTGGTGCTGTCCAATGTCGATGAGCTGT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACTATTCAGTAAGCCTTaGTCTGCCCCGTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGLFSKP*SAPSKL
Trigger: CAGCTTTGACGGGGCAGACCAAGGCTTACTGAATAG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATATGGACCCCAAAAAGTaGACGACCTTTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: EVLRARAETTIESLLECYMDPKK*TTFALE
Trigger: TTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCAT...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCAATGCCGCCTGGTGCTaGCTGCTGGACGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLNAAWC*LLDAEP
Trigger: AGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTTCTTCGATGGAGATCTaGGAAACAGAGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTSSMEI*ETETAR
Trigger: CCTGGCCGTCTCTGTTTCCCAGATCTCCATCGAAGA...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCGGTCCAGCTTCTCCTaGATGCGAGCAAACGCGTCC +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVRSSFS*MRANAS
Trigger: GGACGCGTTTGCTCGCATCCAGGAGAAGCTGGACCG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCTCCGGGAATCCGCGTaGATTTCCAGGCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVLRESA*ISRPLP
Trigger: CGGAAGAGGCCTGGAAATCCACGCGGATTCCCGGAG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAAGAAATGGGTCTCCATaGCAAAGCCTCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQRNGSP*QSLRGA
Trigger: AGCACCTCTGAGGCTTTGCCATGGAGACCCATTTCT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCGGCGGAATTCCAGACTaGACTCACTCCATAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPGGIPD*THSISQ
Trigger: TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAACTTGCTGTAGTGAGTaGGAGTCCAACAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGTCCSE*ESNSEA
Trigger: AGCTTCACTGTTGGACTCTCACTCACTACAGCAAGT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCAAACACCCCGCTATTaGAGCAATCCGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVQTPRY*SNPAIR
Trigger: CCGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGNSVSL*KDQRRS
Trigger: AGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACATTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCT +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTFAKSK*KSVTTS
Trigger: AGACGTGGTGACTGACTTTCATTTGGACTTGGCGAA...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGATTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCT +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGFAKSK*KSVTTS
Trigger: AGACGTGGTGACTGACTTTCATTTGGACTTGGCGAA...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCTTCTCTGGAAAGAGCTaGGTGGAAATGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPFSGKS*VEMALR
Trigger: CCTCAAAGCCATTTCCACTCAGCTCTTTCCAGAGAA...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTGTAAACACATCCAGCTaGCACAGGCTAGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTVNTSS*HRLGSS
Trigger: ACTCGATCCTAGCCTGTGTCAGCTGGATGTGTTTAC...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGACCTTCTGAAAGCCGATaGCCATCCAACCCTGACTCA +
Preference number: 4 (lower is better)
Translates to: SCYPLNDLEQALVASQPGPSESR*PSNPDS
Trigger: TGAGTCAGGGTTGGATGGTCATCGGCTTTCAGAAGG...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCTGACATTGTTTCCCTaGACATTCCCGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTLTLFP*TFPWSP
Trigger: AGGAGACCACGGGAATGTTCAGGGAAACAATGTCAG...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAGGTCCTCAGAGAAGCTaGCATTGTTTCCCTGAACAT +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGGPQRS*HCFPEH
Trigger: ATGTTCAGGGAAACAATGTCAGCTTCTCTGAGGACC...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAGGTCCTCAGAGAAGCTaGCATTGTTTCCCTGAACAT +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTGPQRS*HCFPEH
Trigger: ATGTTCAGGGAAACAATGTCAGCTTCTCTGAGGACC...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCAGCTGCCGGATTACTaGAGGAACCGGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVQLPDY*RNRSSF
Trigger: GAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATCTAGAATGTTATTACTaGTCGCTTTTGCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYLECYY*SLLPTA
Trigger: AGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAG...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACTCACCTTCTCTTCGATaGAGATCTGGGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHSPSLR*RSGKQR
Trigger: TCTCTGTTTCCCAGATCTCCATCGAAGAGAAGGTGA...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTAAGCCCAGAAGGCGTTaGTGGAGAAGTTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVKPRRR*WRSWGE
Trigger: CTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCAGAAATGGGTCTCCATaGCAAAGCCTCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFARNGSP*QSLRGA
Trigger: AGCACCTCTGAGGCTTTGCCATGGAGACCCATTTCT...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAAGAAATGGGTCTCCATaGCAAAGCCTCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNERNGSP*QSLRGA
Trigger: AGCACCTCTGAGGCTTTGCCATGGAGACCCATTTCT...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCAAAACTGAGAATTCTCTaGAAAGAGCTGAGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPKLRIL*KELSGN
Trigger: ATTTCCACTCAGCTCTTTCCAGAGAATTCTCAGTTT...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGAAGGGAGTTCCTGGCTTaGTTCGAAGGTTTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SCYPLNDLEQALVASQPGREFLA*FEGFLG
Trigger: TCCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCT...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR TCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAATTAGATTCACTTCAATaGCTTCATCGAACACCTTCG +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARELDSLQ*LHRTPS
Trigger: CGAAGGTGTTCGATGAAGTCATTGAAGTGAATCTAA...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTGTGAGAGTCCAACAGTaGAGCTTGGTGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVVRVQQ*SLVRVS
Trigger: GCTCACCCTCACCAAGCTTCACTGTTGGACTCTCAC...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACATACTCAAGTTATAGATaGACGGCAGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTYSSYR*TAGACG
Trigger: TCCACAAGCACCTGCCGTTCATCTATAACTTGAGTA...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCGTGTTGTTAGCTTCGTaGTGGGAGGAAATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPVLLAS*WEEICS
Trigger: ACTGCAAATTTCCTCCCATCACGAAGCTAACAACAC...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGTTCGCCAAGTCCAAATaGAAGTCAGTCACCACGTCT +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMFAKSK*KSVTTS
Trigger: AGACGTGGTGACTGACTTTCATTTGGACTTGGCGAA...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACTTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHFSTRK*IGLDPL
Trigger: TAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAA...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCTCGCCCTCCGAGACTaGCGATTATTAACCACCCAC +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVLALRD*RLLTTH
Trigger: GTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAAAAGTGGACGACCTTTaGACTGGAACCGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQKVDDL*TGTELL
Trigger: AAGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAACTTTATTTGCTGGCTaGAAGATGGTTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITARETLFAG*KMVSVS
Trigger: AGAGACTGAAACCATCTTGCAGCCAGCAAATAAAGT...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAGGAGTTTATGCGTGTaGAGAGAAGGCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMRSLCV*REGWKT
Trigger: TGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAATGGACCCCAAAAAGTaGACGACCTTTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEMDPKK*TTFALE
Trigger: TTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCAT...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAAGTTCCAAGGTTTCATaGACCCCAAAAAGTGGACGA +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGSSKVS*TPKSGR
Trigger: TCGTCCACTTTTTGGGGTCCATGAAACCTTGGAACT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAAGTTCCAAGGTTTCATaGACCCCAAAAAGTGGACGA +
Preference number: 4 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTSSKVS*TPKSGR
Trigger: TCGTCCACTTTTTGGGGTCCATGAAACCTTGGAACT...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGATCACCTTCTCTTCGATaGAGATCTGGGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGSPSLR*RSGKQR
Trigger: TCTCTGTTTCCCAGATCTCCATCGAAGAGAAGGTGA...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACCGAGGGGCTTTAAGGTaGATTTCTATACTCTACGTT +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHRGALR*ISILYV
Trigger: AACGTAGAGTATAGAAATCCACCTTAAAGCCCCTCG...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCAAGCCCAGAAGGCGTTaGTGGAGAAGTTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLKPRRR*WRSWGE
Trigger: CTCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACTTAGATTCACTTCAATaGCTTCATCGAACACCTTCG +
Preference number: 4 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHLDSLQ*LHRTPS
Trigger: CGAAGGTGTTCGATGAAGTCATTGAAGTGAATCTAA...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCGTGAGAGTCCAACAGTaGAGCTTGGTGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLVRVQQ*SLVRVS
Trigger: GCTCACCCTCACCAAGCTTCACTGTTGGACTCTCAC...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGTGGTCGACCAGTTCCTaGAGAAACTATTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMWSTSS*RNYSVS
Trigger: GCTTACTGAATAGTTTCTTCAGGAACTGGTCGACCA...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAATGGTCGACCAGTTCCTaGAGAAACTATTCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEWSTSS*RNYSVS
Trigger: GCTTACTGAATAGTTTCTTCAGGAACTGGTCGACCA...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHGGNLQ*GLILNR
Trigger: CCTATTCAGAATTAAACCTCACTGCAAATTTCCTCC...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGTGTTGTTAGCTTCGTaGTGGGAGGAAATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMVLLAS*WEEICS
Trigger: ACTGCAAATTTCCTCCCATCACGAAGCTAACAACAC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAATTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQFSTRK*IGLDPL
Trigger: TAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAA...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACTGACATTGTTTCCCTaGACATTCCCGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALLTLFP*TFPWSP
Trigger: AGGAGACCACGGGAATGTTCAGGGAAACAATGTCAG...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAAAGTGGACGACCTTTaGACTGGAACCGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMKVDDL*TGTELL
Trigger: AAGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAACCTTTATTACAACCATaGCCATTTTTAACGACACTC +
Preference number: 4 (lower is better)
Translates to: GGIPDWTHSISQLITAREPLLQP*PFLTTL
Trigger: GAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGG...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATCCTTTATTACAACCATaGCCATTTTTAACGACACTC +
Preference number: 4 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYPLLQP*PFLTTL
Trigger: GAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGG...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACACTTTATTTGCTGGCTaGAAGATGGTTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHTLFAG*KMVSVS
Trigger: AGAGACTGAAACCATCTTGCAGCCAGCAAATAAAGT...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCAACGGCAGGTGCTTGTaGATGTCTGTGGTCGACCAG +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLNGRCL*MSVVDQ
Trigger: CTGGTCGACCACAGACATCCACAAGCACCTGCCGTT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAAGTTCCAAGGTTTCATaGACCCCAAAAAGTGGACGA +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNESSKVS*TPKSGR
Trigger: TCGTCCACTTTTTGGGGTCCATGAAACCTTGGAACT...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GAAATATCCTACGAGCCTCGCCCTCCGAGACTGACGATTATTAACCACCCACACTTCGACTTTATTTGCTaGCTGCAAGATGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: EISYEPRPPRLTIINHPHFDFIC*LQDGFS
Trigger: ACTGAAACCATCTTGCAGCCAGCAAATAAAGTCGAA...GTGTGGGTGGTTAATAATCGTCAGTCTCGGAGGGCGAGGCTCGTAGGATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCGGTAGAAGTGACCTCTaGAGAAAGCCCAGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLGRSDL*RKPRRR
Trigger: ACGCCTTCTGGGCTTTCTTCAGAGGTCACTTCTACC...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAATCCCTGGAATGTGCATaGGAAATAAACCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNESLECA*EINLPN
Trigger: GTTTGGAAGGTTTATTTCTCATGCACATTCCAGGGA...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCTTTGTCCAAATGAGATaGTACAGGCTAGAATGCACG +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFAFVQMR*YRLECT
Trigger: CGTGCATTCTAGCCTGTATCATCTCATTTGGACAAA...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAAGAAGGTTTCCTCGGATaGGACACTTTCGACTTTATT +
Preference number: 4 (lower is better)
Translates to: RETTAEVFLRYTSPSPNEEGFLG*DTFDFI
Trigger: AATAAAGTCGAAAGTGTCTCATCCGAGGAAACCTTC...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR GCA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAACTTTCGACTTTATTTaGTGGCTGCAAGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: IQARMHGGIPDWTHSISQTFDFI*WLQDGF
Trigger: GAAACCATCTTGCAGCCAGCAAATAAAGTCGAAAGT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTACAGCTCATCGACATTaGACAGCACCAGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVTAHRH*TAPECL
Trigger: CAGACACTCTGGTGCTGTCCAATGTCGATGAGCTGT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTCTTCGATGGAGATCTaGGAAACAGAGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLSSMEI*ETETAR
Trigger: CCTGGCCGTCTCTGTTTCCCAGATCTCCATCGAAGA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTGGAACCGAATTGCTTaGAGGCAGGGCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLWNRIA*RQGCKC
Trigger: ACACTTACAGCCCTGCCTTCAAGCAATTCGGTTCCA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTAACAGCGTTTCCCTTTaGAAGGACCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVNSVSL*KDQRRS
Trigger: AGATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMGGNLQ*GLILNR
Trigger: CCTATTCAGAATTAAACCTCACTGCAAATTTCCTCC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCACAGCTCATCGACATTaGACAGCACCAGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLTAHRH*TAPECL
Trigger: CAGACACTCTGGTGCTGTCCAATGTCGATGAGCTGT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTATGGACCCCAAAAAGTaGACGACCTTTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVMDPKK*TTFALE
Trigger: TTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCAT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
3UTR CAA 72 bp ATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTAGAAGTGACCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IESLLECYYCSL*PTASRVEVTSE
Trigger: TTCAGAGGTCACTTCTACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTATTCTCAACCAGGAAGTaGATCGGTTTAGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALFSTRK*IGLDPL
Trigger: TAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAA...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTAAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAAACTGAGAATTCTCTaGAAAGAGCTGAGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMKLRIL*KELSGN
Trigger: ATTTCCACTCAGCTCTTTCCAGAGAATTCTCAGTTT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCAAACTGAGAATTCTCTaGAAAGAGCTGAGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SGDHHRESTRMLLLLAFAKLRIL*KELSGN
Trigger: ATTTCCACTCAGCTCTTTCCAGAGAATTCTCAGTTT...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTACTCAAGTTATAGATaGACGGCAGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLYSSYR*TAGACG
Trigger: TCCACAAGCACCTGCCGTTCATCTATAACTTGAGTA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTAGGAGGAAATTTGCAGTaGGGTTTAATTCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALGGNLQ*GLILNR
Trigger: CCTATTCAGAATTAAACCTCACTGCAAATTTCCTCC...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTTTTGTCCAAATGAGATaGTACAGGCTAGAATGCACG +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVFVQMR*YRLECT
Trigger: CGTGCATTCTAGCCTGTATCATCTCATTTGGACAAA...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTCACCTTCTCTTCGATaGAGATCTGGGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLSPSLR*RSGKQR
Trigger: TCTCTGTTTCCCAGATCTCCATCGAAGAGAAGGTGA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCGAGGGGCTTTAAGGTaGATTTCTATACTCTACGTT +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVRGALR*ISILYV
Trigger: AACGTAGAGTATAGAAATCCACCTTAAAGCCCCTCG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTATTCGACTTTATTTGCTaGCTGCAAGATGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SPSPNESQSPRLNVSLALFDFIC*LQDGFS
Trigger: ACTGAAACCATCTTGCAGCCAGCAAATAAAGTCGAA...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCAATGAGGCTTTCTCGTaGAATAAAGTTTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLNEAFS*NKVSRL
Trigger: GAGACGGGAAACTTTATTTCACGAGAAAGCCTCATT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR TCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCTTTGTCCAAATGAGATaGTACAGGCTAGAATGCACG +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLFVQMR*YRLECT
Trigger: CGTGCATTCTAGCCTGTATCATCTCATTTGGACAAA...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCCGAGGGGCTTTAAGGTaGATTTCTATACTCTACGTT +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLRGALR*ISILYV
Trigger: AACGTAGAGTATAGAAATCCACCTTAAAGCCCCTCG...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCCTTTATTACAACCATaGCCATTTTTAACGACACTC +
Preference number: 4 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVPLLQP*PFLTTL
Trigger: GAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR GCA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCACTTTCGACTTTATTTaGTGGCTGCAAGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: KVALSSFITTMPIFNDTLTFDFI*WLQDGF
Trigger: GAAACCATCTTGCAGCCAGCAAATAAAGTCGAAAGT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS GCA 90 bp GGTAGACCGTCCACCAGAGATGAAGGAATGCCGCCTGGTGCTGGCTaGTGGACGCTGAGCCTTGCTCCAACACCGAGCCACTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: GRPSTRDEGMPPGAG*WTLSLAPTPSHSVD
Trigger: ATCCACAGAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGGTGGACGGTCTACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS TCA 90 bp AGGGACAGGGTCTCATCCACTATCTGGGTCGGCTCCGGAAGGCCCTaGGCAGGCTGGTTAGAACCCAGTGGTGAATTTGCACACGGCACG +
Preference number: 5 (lower is better)
Translates to: RDRVSSTIWVGSGRP*AGWLEPSGEFAHGT
Trigger: CGTGCCGTGTGCAAATTCACCACTGGGTTCTAACCAGCCTGCTCAGGGCCTTCCGGAGCCGACCCAGATAGTGGATGAGACCCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS CCA 90 bp AGACCGTCCACCAGAGATGAAGGAATGCCGCCTGGTGCTGGCTGCTaGACGCTGAGCCTTGCTCCAACACCGAGCCACTCTGTGGATTGT +
Preference number: 5 (lower is better)
Translates to: RPSTRDEGMPPGAGC*TLSLAPTPSHSVDC
Trigger: ACAATCCACAGAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGGTGGACGGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS GCA 90 bp ACCAGCTGCCGGATTACTGCAGGAACCGGTCCAGCTTCTCCTGGATaGGAGCAAACGCGTCCTTCCCCATGTAGTCGATACGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: TSCRITAGTGPASPG*EQTRPSPCSRYGLP
Trigger: AGGAAGGCCGTATCGACTACATGGGGAAGGACGCGTTTGCTCGCATCCAGGAGAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS CCA 90 bp ATGCAGTTGACCTCAGTGACGGTGGATGGCCCCCACCGGGAGCCTTaGGCAAGGGGAAGAATTTGGATACCACCTCCAGTGCATCCTGCA +
Preference number: 5 (lower is better)
Translates to: MQLTSVTVDGPHREP*ARGRIWIPPPVHPA
Trigger: TGCAGGATGCACTGGAGGTGGTATCCAAATTCTTCCCCTTGCCCAAGGCTCCCGGTGGGGGCCATCCACCGTCACTGAGGTCAACTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS-3UTR CAA 90 bp GGTAGTGAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCGCGTGCTTCCCCCGCTaGGACGCTTTTATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GSEGRDQAKSSQGWTDCTACFPR*DAFIKG
Trigger: CCCCTTTATAAAAGCGTCCAAGCGGGGGAAGCACGC...GGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTCACTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTAAAGCCCAGAAGGCGTaGGTGGAGAAGTTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTKAQKA*VEKLGR
Trigger: TCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS TCA 90 bp CCACCAGAGATGAAGGAATGCCGCCTGGTGCTGGCTGCTGGACGCTaGGCCTTGCTCCAACACCGAGCCACTCTGTGGATTGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: PPEMKECRLVLAAGR*ALLQHRATLWIVLV
Trigger: TACAAGTACAATCCACAGAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS TCA 90 bp GCCAGGTCGACCAAGATGGTTTCAGTCTCTGTGAAGTCTGCAGGCTaGGGGGAAGGCTGGGACAGTGGGTCACACGTTATCACGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ARSTKMVSVSVKSAG*GEGWDSGSHVITAG
Trigger: TCCTGCCGTGATAACGTGTGACCCACTGTCCCAGCCTTCCCCTCAGCCTGCAGACTTCACAGAGACTGAAACCATCTTGGTCGACCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381157.2
CDS GCA 90 bp GGACATTGTCTAACTACACACAACGCCCACCAGCTGCCGGATTACTaGAGGAACCGGTCCAGCTTCTCCTGGATGCGAGCAAACGCGTCC +
Preference number: 5 (lower is better)
Translates to: GHCLTTHNAHQLPDY*RNRSSFSWMRANAS
Trigger: GGACGCGTTTGCTCGCATCCAGGAGAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTGGTGGGCGTTGTGTGTAGTTAGACAATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGGTAGAGACCAAGCCAAGAGCAGTCAAGGGTGGACCGACTGCACCCTGACTACAAACACCCCGCTATaGAAGCAATCCGGCCATCCG +
Preference number: 5 (lower is better)
Translates to: EGRDQAKSSQGWTDCTLTTNTPL*KQSGHP
Trigger: CGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTGT...AGTCAGGGTGCAGTCGGTCCACCCTTGACTGCTCTTGGCTTGGTCTCTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS GCA 90 bp AGTAAGCCTTGGTCTGCCCCGTCAAAGCTGCCGTGTTCCATGGCGTaGTGTAGCAGGAGTTTATGCGTGTGGAGAGAAGGCTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: SKPWSAPSKLPCSMA*CSRSLCVWREGWKT
Trigger: TGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACACGGCAGCTTTGACGGGGCAGACCAAGGCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS CCA 90 bp TTCAGTCTCTGTGAAGTCTGCAGGCTGAGGGGAAGGCTGGGACAGTaGGTCACACGTTATCACGGCAGGAGTCTCAGTTTCAGGACAAGC +
Preference number: 5 (lower is better)
Translates to: FSLCEVCRLRGRLGQ*VTRYHGRSLSFRTS
Trigger: GCTTGTCCTGAAACTGAGACTCCTGCCGTGATAACGTGTGACCCACTGTCCCAGCCTTCCCCTCAGCCTGCAGACTTCACAGAGACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381157.2
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
CDS CCA 90 bp TCCTCCTCTCTTCCTCGGGGCTCAATTCCTTCACCTTCTCTTCGATaGAGATCTGGGAAACAGAGACGGCCAGGTCGACCTCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SSSLPRGSIPSPSLR*RSGKQRRPGRPPVH
Trigger: ATGCACTGGAGGTCGACCTGGCCGTCTCTGTTTCCCAGATCTCCATCGAAGAGAAGGTGAAGGAATTGAGCCCCGAGGAAGAGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CAA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATAACCCAGTGGTGAATTaGCACACGGCACGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: EVLRARAETTIESLLECYNPVVN*HTARPH
Trigger: GTGCGGGCGTGCCGTGTGCAAATTCACCACTGGGTT...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTGAAAAAGCCCAGAAGGCGTaGGTGGAGAAGTTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: GGIPDWTHSISQLITAREKAQKA*VEKLGR
Trigger: TCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT...TTCACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp CCAGAAGGCGTTGGTGGAGAAGTTGGGGCGAGGGGCTTTAAGGTGGATTTCTATCAGGGAGTTCCTGGCTaGGTTCGAAGGTTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: PEGVGGEVGARGFKVDFYQGVPG*VRRFPR
Trigger: CCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCTG...ATAGAAATCCACCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGCCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS GCA 90 bp CCGTCAAAGCTGCCGTGTTCCATGGCGTGCTGTAGCAGGAGTTTATaGGTGTGGAGAGAAGGCTGGAAGACAAACACCCCGCTATTGAAG +
Preference number: 5 (lower is better)
Translates to: PSKLPCSMACCSRSL*VWREGWKTNTPLLK
Trigger: CTTCAATAGCGGGGTGTTTGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACACGGCAGCTTTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATCGCCCGCACTGGGTGTaGAATTTTCACACGGCTCTC +
Preference number: 5 (lower is better)
Translates to: EVLRARAETTIESLLECYRPHWV*NFHTAL
Trigger: GAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGCG...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCAACCCAGTGGTGAATTaGCACACGGCACGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPNPVVN*HTARPH
Trigger: GTGCGGGCGTGCCGTGTGCAAATTCACCACTGGGTT...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAAACCCAGTGGTGAATTaGCACACGGCACGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTNPVVN*HTARPH
Trigger: GTGCGGGCGTGCCGTGTGCAAATTCACCACTGGGTT...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GTACAACACAGCTCCAGCGTACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACAACAGCGTTTCCCTTaGAAAGGACCAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: VQHSSSVLQRSFGQERRPQQRFP*KGPEEI
Trigger: GATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTG...TGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTACGCTGGAGCTGTGTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp CTTCTCAACCAGGAAGTGAATCGGTTTAGATCCTCTAAGCCACCCACATTCCCCGCGTTGGTGGAGAAGTaGGGGCGAGGGGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: LLNQEVNRFRSSKPPTFPALVEK*GRGALR
Trigger: CCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGC...GGGGAATGTGGGTGGCTTAGAGGATCTAAACCGATTCACTTCCTGGTTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS CCA 90 bp AAGCTGCCGTGTTCCATGGCGTGCTGTAGCAGGAGTTTATGCGTGTaGAGAGAAGGCTGGAAGACAAACACCCCGCTATTGAAGCAATCC +
Preference number: 5 (lower is better)
Translates to: KLPCSMACCSRSLCV*REGWKTNTPLLKQS
Trigger: GGATTGCTTCAATAGCGGGGTGTTTGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACACGGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACGCTGAGGTGGGTGAATaGCTTGACCTCAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHAEVGE*LDLRSS
Trigger: CGAACTCCTGAGGTCAAGCAATTCACCCACCTCAGC...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACACACAAACACCCCGCTATaGAAGCAATCCGGCCATCCG +
Preference number: 5 (lower is better)
Translates to: EEISTQQDHPTGHCLTTHTNTPL*KQSGHP
Trigger: CGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTGT...GTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAGCGTGCTTCCCCCGCTaGGACGCTTTTATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTACFPR*DAFIKG
Trigger: CCCCTTTATAAAAGCGTCCAAGCGGGGGAAGCACGC...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACGCCCGCACTGGGTGTaGAATTTTCACACGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGRPHWV*NFHTAL
Trigger: GAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGCG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTCCACCCAACAGGACATaGTCTAACTACACACAACGC +
Preference number: 5 (lower is better)
Translates to: HGGIPDWTHSISQLITARPPNRT*SNYTQR
Trigger: GCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGG...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGGCGTTGGTGGAGAAGTaGGGGCGAGGGGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMALVEK*GRGALR
Trigger: CCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGC...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAAAAGCCCAGAAGGCGTaGGTGGAGAAGTTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGKAQKA*VEKLGR
Trigger: TCGCCCCAACTTCTCCACCAACGCCTTCTGGGCTTT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGACAGGGAGTTCCTGGCTaGGTTCGAAGGTTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGQGVPG*VRRFPR
Trigger: CCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCTG...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CAA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAGCTGAGGTGGGTGAATaGCTTGACCTCAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTAEVGE*LDLRSS
Trigger: CGAACTCCTGAGGTCAAGCAATTCACCCACCTCAGC...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000639373.1
CDS-3UTR CAA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAAATGAACGGCAGGTGCTaGTGGATGTCTGTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: IQARMHGGIPDWTHSISQMNGRC*WMSVVD
Trigger: GTCGACCACAGACATCCACAAGCACCTGCCGTTCAT...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TTCTCCCACGGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAAGGTGGGTGAATTGCTaGACCTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: FSHGLPIPSLIYSLLFPGRWVNC*TSGVRD
Trigger: GTCTCGAACTCCTGAGGTCAAGCAATTCACCCACCT...TCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCCGTGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATAACAGCTCATCGACATaGGACAGCACCAGAGTGTCT +
Preference number: 5 (lower is better)
Translates to: EVLRARAETTIESLLECYNSSST*DSTRVS
Trigger: AGACACTCTGGTGCTGTCCAATGTCGATGAGCTGTT...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TACTTCAGAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAAAAAGTGGACGACCTTaGCACTGGAACCGAATTGCT +
Preference number: 5 (lower is better)
Translates to: YFRGPSGKSGDHHRESTRKSGRP*HWNRIA
Trigger: AGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTTT...TCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTCTGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS TCA 90 bp AGCCTCAGCAGGGAGTTCCTGGCTTGGTTCGAAGGTTTCCTCGGATaGGACACTTTCGACTTTATTTGCTGGCTGCAAGATGGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: SLSREFLAWFEGFLG*DTFDFICWLQDGFS
Trigger: ACTGAAACCATCTTGCAGCCAGCAAATAAAGTCGAAAGTGTCTCATCCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCTGCTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
CDS-3UTR CAA 90 bp AGAGAGACCACAGCCGAGGTGTTTCTCAGATACACTTCGCCAAGTCCAAATGAATGCACTGGAACCGAATaGCTTGAAGGCAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: RETTAEVFLRYTSPSPNECTGTE*LEGRAV
Trigger: TACAGCCCTGCCTTCAAGCAATTCGGTTCCAGTGCA...TTCATTTGGACTTGGCGAAGTGTATCTGAGAAACACCTCGGCTGTGGTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATTACTGCTCGCTTTTGCCTGCACTGGAACCGAATaGCTTGAAGGCAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SGDHHRESTRMLLLLAFACTGTE*LEGRAV
Trigger: TACAGCCCTGCCTTCAAGCAATTCGGTTCCAGTGCA...GGCAAAAGCGAGCAGTAATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTAGCGTGCTTCCCCCGCTaGGACGCTTTTATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPSPNESQSPRLNVSLALACFPR*DAFIKG
Trigger: CCCCTTTATAAAAGCGTCCAAGCGGGGGAAGCACGC...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS CCA 90 bp ACACCGAGCCACTCTGTGGATTGTACTTGTAGTTCCAAGGTTTCATaGACCCCAAAAAGTGGACGACCTTTGCACTGGAACCGAATTGCT +
Preference number: 5 (lower is better)
Translates to: TPSHSVDCTCSSKVS*TPKSGRPLHWNRIA
Trigger: AGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCATGAAACCTTGGAACTACAAGTACAATCCACAGAGTGGCTCGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS-3UTR CAA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGAAGGTGGGTGAATTGCTaGACCTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SCYPLNDLEQALVASQPGRWVNC*TSGVRD
Trigger: GTCTCGAACTCCTGAGGTCAAGCAATTCACCCACCT...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000639373.1
CDS-3UTR CAA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGATGCACTGGAACCGAATaGCTTGAAGGCAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SCYPLNDLEQALVASQPGCTGTE*LEGRAV
Trigger: TACAGCCCTGCCTTCAAGCAATTCGGTTCCAGTGCA...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATTGTCTAACTACACAAAAAGTGGACGACCTTaGCACTGGAACCGAATTGCT +
Preference number: 5 (lower is better)
Translates to: RGDLHATGPPNRTLSNYTKSGRP*HWNRIA
Trigger: AGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTTT...TGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGCCACCCAACAGGACATaGTCTAACTACACACAACGC +
Preference number: 5 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMPPNRT*SNYTQR
Trigger: GCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGG...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp CACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAACTCATCACTGCCCGTTATACTCTACGTTTTTaGTGTGAGGCACTCAAATGG +
Preference number: 5 (lower is better)
Translates to: HGGIPDWTHSISQLITARYTLRF*CEALKW
Trigger: CCATTTGAGTGCCTCACACAAAAAACGTAGAGTATA...ACGGGCAGTGATGAGTTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCGCGTTGGTGGAGAAGTaGGGGCGAGGGGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: KVALSSFITTMPIFNDTLALVEK*GRGALR
Trigger: CCTTAAAGCCCCTCGCCCCAACTTCTCCACCAACGC...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp ATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTCACTCCATAAGCCAATATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: IQARMHGGIPDWTHSISQYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...TTGGCTTATGGAGTGAGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTATGAACGGCAGGTGCTaGTGGATGTCTGTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVMNGRC*WMSVVD
Trigger: GTCGACCACAGACATCCACAAGCACCTGCCGTTCAT...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGAAAAGTGGACGACCTTaGCACTGGAACCGAATTGCT +
Preference number: 5 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMKSGRP*HWNRIA
Trigger: AGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTTT...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCCGCCCGCACTGGGTGTaGAATTTTCACACGGCTCTC +
Preference number: 5 (lower is better)
Translates to: KVALSSFITTMPIFNDTLRPHWV*NFHTAL
Trigger: GAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGCG...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGACAACAGCGTTTCCCTTaGAAAGGACCAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: SCYPLNDLEQALVASQPGQQRFP*KGPEEI
Trigger: GATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTG...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TGTCCAAATGAGATGATACAGGCTAGAATGCACGGCGGAATTCCAGACTGGACTTATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: CPNEMIQARMHGGIPDWTYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...AGTCCAGTCTGGAATTCCGCCGTGCATTCTAGCCTGTATCATCTCATTTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GAGGTCCTTCGGGCAAGAGCGGAGACCACCATCGAGAGTCTACTAGAATGTTATCACTTTCGACTTTATTaGCTGGCTGCAAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: EVLRARAETTIESLLECYHFRLY*LAARWF
Trigger: AAACCATCTTGCAGCCAGCAAATAAAGTCGAAAGTG...ATAACATTCTAGTAGACTCTCGATGGTGGTCTCCGCTCTTGCCCGAAGGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS-3UTR CAA 90 bp AAAGTCGCACTTTCCTCCTTTATTACAACCATGCCCATTTTTAACGACACTCTCACAAACACCCCGCTATaGAAGCAATCCGGCCATCCG +
Preference number: 5 (lower is better)
Translates to: KVALSSFITTMPIFNDTLTNTPL*KQSGHP
Trigger: CGGATGGCCGGATTGCTTCAATAGCGGGGTGTTTGT...GAGAGTGTCGTTAAAAATGGGCATGGTTGTAATAAAGGAGGAAAGTGCGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TCCTGTTATCCTCTAAACGATTTAGAGCAAGCCCTCGTTGCTTCTCAACCAGGATATTACTGCTCGCTTTaGCCGACAGCTTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: SCYPLNDLEQALVASQPGYYCSL*PTASRV
Trigger: TACCCTTGAAGCTGTCGGCAAAAGCGAGCAGTAATA...TCCTGGTTGAGAAGCAACGAGGGCTTGCTCTAAATCGTTTAGAGGATAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GTGAGGCACTCAAATGGATTAAGCATAAATAGAGGCACAAGGTTCAACAGCGTTCAACAGCGTTTCCCTTaGAAAGGACCAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: VRHSNGLSINRGTRFNSVQQRFP*KGPEEI
Trigger: GATCTCCTCTGGTCCTTTCAAAGGGAAACGCTGTTG...AACGCTGTTGAACCTTGTGCCTCTATTTATGCTTAATCCATTTGAGTGCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp GGCCTTCCTATCCCGTCTCTAATTTACTCTCTGCTTTTCCCTGGAATGTGCATGTATACTCTACGTTTTTaGTGTGAGGCACTCAAATGG +
Preference number: 5 (lower is better)
Translates to: GLPIPSLIYSLLFPGMCMYTLRF*CEALKW
Trigger: CCATTTGAGTGCCTCACACAAAAAACGTAGAGTATA...CATGCACATTCCAGGGAAAAGCAGAGAGTAAATTAGAGACGGGATAGGAAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS-3UTR CAA 90 bp TCGCCAAGTCCAAATGAAAGTCAGTCACCACGTCTAAATGTTTCCTTAGCCCTACACTTTCGACTTTATTaGCTGGCTGCAAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: SPSPNESQSPRLNVSLALHFRLY*LAARWF
Trigger: AAACCATCTTGCAGCCAGCAAATAAAGTCGAAAGTG...TAGGGCTAAGGAAACATTTAGACGTGGTGACTGACTTTCATTTGGACTTGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381163.7
ENST00000398806.8
CDS GCA 72 bp TCCACCAGAGATGAAGGAATGCCGCCTGGTGCTGGCTaGTGGACGCTGAGCCTTGCTCCAACACCGAGCCAC +
Preference number: 6 (lower is better)
Translates to: STRDEGMPPGAG*WTLSLAPTPSH
Trigger: GTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGGTGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS CCA 72 bp ACCAGAGATGAAGGAATGCCGCCTGGTGCTGGCTGCTaGACGCTGAGCCTTGCTCCAACACCGAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: TRDEGMPPGAGC*TLSLAPTPSHS
Trigger: AGAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCATCTCTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS CCA 72 bp ACCTCAGTGACGGTGGATGGCCCCCACCGGGAGCCTTaGGCAAGGGGAAGAATTTGGATACCACCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: TSVTVDGPHREP*ARGRIWIPPPV
Trigger: CACTGGAGGTGGTATCCAAATTCTTCCCCTTGCCCAAGGCTCCCGGTGGGGGCCATCCACCGTCACTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS CAA 72 bp GACCTCAGTGACGGTGGATGGCCCCCACCGGGAGCCTaGGGCAAGGGGAAGAATTTGGATACCACCTCCAGT +
Preference number: 6 (lower is better)
Translates to: DLSDGGWPPPGA*GKGKNLDTTSS
Trigger: ACTGGAGGTGGTATCCAAATTCTTCCCCTTGCCCAAGGCTCCCGGTGGGGGCCATCCACCGTCACTGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS CAA 90 bp CATGCAGTTGACCTCAGTGACGGTGGATGGCCCCCACCGGGAGCCTaGGGCAAGGGGAAGAATTTGGATACCACCTCCAGTGCATCCTGC +
Preference number: 6 (lower is better)
Translates to: HAVDLSDGGWPPPGA*GKGKNLDTTSSASC
Trigger: GCAGGATGCACTGGAGGTGGTATCCAAATTCTTCCCCTTGCCCAAGGCTCCCGGTGGGGGCCATCCACCGTCACTGAGGTCAACTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS TCA 72 bp ATGAAGGAATGCCGCCTGGTGCTGGCTGCTGGACGCTaGGCCTTGCTCCAACACCGAGCCACTCTGTGGATT +
Preference number: 6 (lower is better)
Translates to: MKECRLVLAAGR*ALLQHRATLWI
Trigger: AATCCACAGAGTGGCTCGGTGTTGGAGCAAGGCTCAGCGTCCAGCAGCCAGCACCAGGCGGCATTCCTTCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS GCA 72 bp TGGTCTGCCCCGTCAAAGCTGCCGTGTTCCATGGCGTaGTGTAGCAGGAGTTTATGCGTGTGGAGAGAAGGC +
Preference number: 6 (lower is better)
Translates to: WSAPSKLPCSMA*CSRSLCVWREG
Trigger: GCCTTCTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACACGGCAGCTTTGACGGGGCAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS GCA 72 bp CTAACTACACACAACGCCCACCAGCTGCCGGATTACTaGAGGAACCGGTCCAGCTTCTCCTGGATGCGAGCA +
Preference number: 6 (lower is better)
Translates to: LTTHNAHQLPDY*RNRSSFSWMRA
Trigger: TGCTCGCATCCAGGAGAAGCTGGACCGGTTCCTGCAGTAATCCGGCAGCTGGTGGGCGTTGTGTGTAGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS CCA 72 bp AGCCTTGGTCTGCCCCGTCAAAGCTGCCGTGTTCCATaGCGTGCTGTAGCAGGAGTTTATGCGTGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: SLGLPRQSCRVP*RAVAGVYACGE
Trigger: CTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACACGGCAGCTTTGACGGGGCAGACCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS TCA 72 bp GTCTCATCCACTATCTGGGTCGGCTCCGGAAGGCCCTaGGCAGGCTGGTTAGAACCCAGTGGTGAATTTGCA +
Preference number: 6 (lower is better)
Translates to: VSSTIWVGSGRP*AGWLEPSGEFA
Trigger: TGCAAATTCACCACTGGGTTCTAACCAGCCTGCTCAGGGCCTTCCGGAGCCGACCCAGATAGTGGATGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS CAA 72 bp GTGGTGAATTTGCACACGGCACGCCCGCACTGGGTGTaGAATTTTCACACGGCTCTCCAACACCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: VVNLHTARPHWV*NFHTALQHQRL
Trigger: CAGCCTCTGGTGTTGGAGAGCCGTGTGAAAATTCAACACCCAGTGCGGGCGTGCCGTGTGCAAATTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS CAA 90 bp AGGACCAGAGGAGATCTCCACGCAACAGGACCACCCAACAGGACATaGTCTAACTACACACAACGCCCACCAGCTGCCGGATTACTGCAG +
Preference number: 6 (lower is better)
Translates to: RTRGDLHATGPPNRT*SNYTQRPPAAGLLQ
Trigger: CTGCAGTAATCCGGCAGCTGGTGGGCGTTGTGTGTAGTTAGACAATGTCCTGTTGGGTGGTCCTGTTGCGTGGAGATCTCCTCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000639373.1
CDS CAA 72 bp GAGGCTGAAAAATTAACAGCTGTTGTGTGCATGCAGTaGACCTCAGTGACGGTGGATGGCCCCCACCGGGAG +
Preference number: 6 (lower is better)
Translates to: EAEKLTAVVCMQ*TSVTVDGPHRE
Trigger: CTCCCGGTGGGGGCCATCCACCGTCACTGAGGTCAACTGCATGCACACAACAGCTGTTAATTTTTCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS CCA 72 bp TGTTCCATGGCGTGCTGTAGCAGGAGTTTATGCGTGTaGAGAGAAGGCTGGAAGACAAACACCCCGCTATTG +
Preference number: 6 (lower is better)
Translates to: CSMACCSRSLCV*REGWKTNTPLL
Trigger: CAATAGCGGGGTGTTTGTCTTCCAGCCTTCTCTCCACACGCATAAACTCCTGCTACAGCACGCCATGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1
CDS CAA 90 bp TTGTTAAATGAGGCTGAAAAATTAACAGCTGTTGTGTGCATGCAGTaGACCTCAGTGACGGTGGATGGCCCCCACCGGGAGCCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: LLNEAEKLTAVVCMQ*TSVTVDGPHREPWA
Trigger: TGCCCAAGGCTCCCGGTGGGGGCCATCCACCGTCACTGAGGTCAACTGCATGCACACAACAGCTGTTAATTTTTCAGCCTCATTTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS GCA 72 bp CCAAGGTTTCATGGACCCCAAAAAGTGGACGACCTTTaGACTGGAACCGAATTGCTTGAAGGCAGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: PRFHGPQKVDDL*TGTELLEGRAV
Trigger: TACAGCCCTGCCTTCAAGCAATTCGGTTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCATGAAACCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS TCA 72 bp AGGGAGTTCCTGGCTTGGTTCGAAGGTTTCCTCGGATaGGACACTTTCGACTTTATTTGCTGGCTGCAAGAT +
Preference number: 6 (lower is better)
Translates to: REFLAWFEGFLG*DTFDFICWLQD
Trigger: ATCTTGCAGCCAGCAAATAAAGTCGAAAGTGTCTCATCCGAGGAAACCTTCGAACCAAGCCAGGAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
CDS GCA 72 bp TTGTTAAATGAGGCTGAAAAATTAACAGCTGTTGTGTaGATGCAGTTGACCTCAGTGACGGTGGATGGCCCC +
Preference number: 6 (lower is better)
Translates to: LLNEAEKLTAVV*MQLTSVTVDGP
Trigger: GGGGCCATCCACCGTCACTGAGGTCAACTGCATGCACACAACAGCTGTTAATTTTTCAGCCTCATTTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453106.1
CDS CCA 72 bp CACTCTGTGGATTGTACTTGTAGTTCCAAGGTTTCATaGACCCCAAAAAGTGGACGACCTTTGCACTGGAAC +
Preference number: 6 (lower is better)
Translates to: HSVDCTCSSKVS*TPKSGRPLHWN
Trigger: GTTCCAGTGCAAAGGTCGTCCACTTTTTGGGGTCCATGAAACCTTGGAACTACAAGTACAATCCACAGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000639373.1
CDS TCA 72 bp TGTAAGTGTACATCGTGTTACTACTCAAGTTATAGATaGACGGCAGGTGCTTGTGGATGTCTGTGGTCGACC +
Preference number: 6 (lower is better)
Translates to: CKCTSCYYSSYR*TAGACGCLWST
Trigger: GGTCGACCACAGACATCCACAAGCACCTGCCGTTCATCTATAACTTGAGTAGTAACACGATGTACACTTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000353656.10
ENST00000381157.2
ENST00000381161.5
ENST00000381163.7
ENST00000398806.8
ENST00000453106.1
ENST00000469234.6
ENST00000639373.1