Pregenerated sensors for GXYLT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000151233Ensembl transcript IDs: ENST00000398675.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGTCAGCACCTTTCCTGACCCCAGAGAGCCCAGGCAAGCAAACTaGTGTAGTGTGAGGGCTACAACTCAAAAAGTAAATGTTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: EVSTFPDPREPRQAN*CSVRATTQKVNVST Trigger: TGTGGAAACATTTACTTTTTGAGTTGTAGCCCTCACACTACATCAGTTTGCTTGCCTGGGCTCTCTGGGGTCAGGAAAGGTGCTGACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR CCA 90 bp | TATTGCTTAATTTGCCATCCAAGGCAGGGCAGTGATTCCCAAACCTaGCCTCTCGTCAGTATCATCTGCGAAAACTGCTGCAACACATTC | + |
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Preference number: 1 (lower is better) Translates to: YCLICHPRQGSDSQT*PLVSIICENCCNTF Trigger: GAATGTGTTGCAGCAGTTTTCGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGATGGCAAATTAAGCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR TCA 90 bp | AATAGGTGTAATTTATTGCTTAATTTGCCATCCAAGGCAGGGCAGTaGTTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: NRCNLLLNLPSKAGQ*FPNLASRQYHLRKL Trigger: CAGTTTTCGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGATGGCAAATTAAGCAATAAATTACACCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR GCA 90 bp | AAGGTTTCCCAAGTTCTTTTCTACTTCATACAAATGAAGTTTGACTaGATTTTAAAGGCATCCCACTTTGGTAATACTGTAGCCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: KVSQVLFYFIQMKFD*ILKASHFGNTVAQR Trigger: TCTCTGGGCTACAGTATTACCAAAGTGGGATGCCTTTAAAATGCAGTCAAACTTCATTTGTATGAAGTAGAAAAGAACTTGGGAAACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCTCTACTCACAGTCTTaGGTGTTGGCACTGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSALYSQS*VLALFE Trigger: CTCAAACAGTGCCAACACTCAAGACTGTGAGTAGAG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTCTTACTCTGCCCTTTaGCATCCCCATTCTTACTCC | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSASYSAL*HPHSYS Trigger: GGAGTAAGAATGGGGATGGCAAAGGGCAGAGTAAGA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGATAATCCACCAAACGTaGCAAGAATTGTGGTATCCT | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAIIHQT*QELWYP Trigger: AGGATACCACAATTCTTGGCACGTTTGGTGGATTAT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTGTGGTATCCTAACTTaGACTTTCAAGTTGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSACGILT*TFKLAK Trigger: TTTTGCCAACTTGAAAGTTCAAGTTAGGATACCACA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGACGTGCCAAGAATTGTaGTATCCTAACTTGAACTTT | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSATCQEL*YPNLNF Trigger: AAAGTTCAAGTTAGGATACCACAATTCTTGGCACGT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCTTGAACTTTCAAGTTaGCAAAATAATTTCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: IQGRAVIPKPGLSSVSSALELSS*QNNFQW Trigger: CCACTGGAAATTATTTTGCCAACTTGAAAGTTCAAG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCTTAAGGACTGGCTATaGGATGAAGCCGAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: SIISSEFHLVRFEGYTDCLKDWL*DEAEGL Trigger: CAGTCCTTCGGCTTCATCTCATAGCCAGTCCTTAAG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTGTCAGATCTGGATGTTaGGTACCAATGCACTATTCT | + |
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Preference number: 2 (lower is better) Translates to: SIISSEFHLVRFEGYTDCVRSGC*VPMHYS Trigger: AGAATAGTGCATTGGTACTCAACATCCAGATCTGAC...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTATAGCTTATGCATTTTaGTCCATCACACTTTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SIISSEFHLVRFEGYTDCIAYAF*SITLST Trigger: GGTGGAAAGTGTGATGGACCAAAATGCATAAGCTAT...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTATAATCAGGGAAATTTaGTTAAGGACTGGCTATGAG | + |
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Preference number: 2 (lower is better) Translates to: SIISSEFHLVRFEGYTDCIIREI*LRTGYE Trigger: CTCATAGCCAGTCCTTAAGCAAATTTCCCTGATTAT...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCACATAGATTGTCAATaGTTACATCAGTTACATCAC | + |
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Preference number: 2 (lower is better) Translates to: SIISSEFHLVRFEGYTDCHIDCQ*LHQLHH Trigger: GTGATGTAACTGATGTAACCATTGACAATCTATGTG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGGCTGCAACACATTCCTaGGCCCCCTTCAGACCTAAT | + |
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Preference number: 3 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAAATHS*APFRPN Trigger: ATTAGGTCTGAAGGGGGCCAAGGAATGTGTTGCAGC...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR CCA 72 bp | ATTTGCCATCCAAGGCAGGGCAGTGATTCCCAAACCTaGCCTCTCGTCAGTATCATCTGCGAAAACTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: ICHPRQGSDSQT*PLVSIICENCC Trigger: GCAGCAGTTTTCGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGATGGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR GCA 72 bp | AGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTaGGAAAACTGCTGCAACACATTCCTTGGCCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: SDSQTWPLVSII*ENCCNTFLGPL Trigger: AAGGGGGCCAAGGAATGTGTTGCAGCAGTTTTCGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTTCTTCAAAAGTATCTaGCAAGGCCGTTATGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAFFKSI*QGRYEV Trigger: TACCTCATAACGGCCTTGCAAGATACTTTTGAAGAA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CAA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCTGTCAGATCTGGATGTaGAGTACCAATGCACTATTC | + |
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Preference number: 3 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFCQIWM*STNALF Trigger: GAATAGTGCATTGGTACTCAACATCCAGATCTGACA...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CAA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCCAAACGTGCCAAGAATaGTGGTATCCTAACTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFQTCQE*WYPNLN Trigger: GTTCAAGTTAGGATACCACAATTCTTGGCACGTTTG...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR-3UTR CAA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCTTGTGGTATCCTAACTaGAACTTTCAAGTTGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFLWYPN*NFQVGK Trigger: TTTGCCAACTTGAAAGTTCAAGTTAGGATACCACAA...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR TCA 72 bp | AATTTATTGCTTAATTTGCCATCCAAGGCAGGGCAGTaGTTCCCAAACCTGGCCTCTCGTCAGTATCATCTG | + |
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Preference number: 3 (lower is better) Translates to: NLLLNLPSKAGQ*FPNLASRQYHL Trigger: CAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGATGGCAAATTAAGCAATAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR TCA 72 bp | AGTGTGTGTGACAGTGTAAATAAGCCACAACATGAGTaGGACCACAGCATACAGTCCAGTTGGATTAAACTG | + |
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Preference number: 3 (lower is better) Translates to: SVCDSVNKPQHE*DHSIQSSWIKL Trigger: CAGTTTAATCCAACTGGACTGTATGCTGTGGTCTCACTCATGTTGTGGCTTATTTACACTGTCACACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR CCA 72 bp | AACGAACAAAACAGAACTTCAACAGTAACACTGGCGTaGCATAATATAAGCCACGCAAAATGCTTCCAAATC | + |
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Preference number: 3 (lower is better) Translates to: NEQNRTSTVTLA*HNISHAKCFQI Trigger: GATTTGGAAGCATTTTGCGTGGCTTATATTATGCCACGCCAGTGTTACTGTTGAAGTTCTGTTTTGTTCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR CCA 72 bp | ATCACATTTATAATCCACCAAACGTGCCAAGAATTGTaGTATCCTAACTTGAACTTTCAAGTTGGCAAAATA | + |
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Preference number: 3 (lower is better) Translates to: ITFIIHQTCQEL*YPNLNFQVGKI Trigger: TATTTTGCCAACTTGAAAGTTCAAGTTAGGATACCACAATTCTTGGCACGTTTGGTGGATTATAAATGTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTACAGCAGGCCCTGCTaGCCCATTCCATGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAYSRPC*PIPWKS Trigger: TGACTTCCATGGAATGGGGCAGCAGGGCCTGCTGTA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGAAATACAGCAGGCCCTaGTGCCCCATTCCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAKYSRP*CPIPWK Trigger: CTTCCATGGAATGGGGCAGCAGGGCCTGCTGTATTT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTGCTGCCCCATTCCATaGAAGTCAGCACCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSACCPIP*KSAPFL Trigger: CAGGAAAGGTGCTGACTTCCATGGAATGGGGCAGCA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCTCAAGCAATCCTCCTaGCTCAACTTCCTGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSALKQSS*LNFLCS Trigger: GCTACACAGGAAGTTGAGGCAGGAGGATTGCTTGAG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCCCGCCCCGACGAACTaGAGCGGAGGGAGGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCPAPTN*SGGRGT Trigger: GGTGCCCCTCCCTCCGCTCCAGTTCGTCGGGGCGGG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCTGAGTTTCATCTTGTaGGGTTTGAAGGGTACACTG | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSALSFIL*GLKGTL Trigger: CAGTGTACCCTTCAAACCTCACAAGATGAAACTCAG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCGCAATCTTGGCTCTCTaGAGCCTCAAACTCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFAILAL*SLKLLH Trigger: GTGCAAGAGTTTGAGGCTGCAGAGAGCCAAGATTGC...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCCAATAACATCTGACTaGAGGCAAGATGAGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAPITSD*RQDERA Trigger: TGCTCTCTCATCTTGCCTCCAGTCAGATGTTATTGG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGACAGTAACACTGGCGTaGCATAATATAAGCCACGCA | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSATVTLA*HNISHA Trigger: TGCGTGGCTTATATTATGCCACGCCAGTGTTACTGT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGATAGCTTATGCATTTTaGTCCATCACACTTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAIAYAF*SITLST Trigger: GGTGGAAAGTGTGATGGACCAAAATGCATAAGCTAT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACTTAAGGACTGGCTATaGGATGAAGCCGAAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQLKDWL*DEAEGL Trigger: CAGTCCTTCGGCTTCATCTCATAGCCAGTCCTTAAG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAAAGCCACAACATGAGTaGGACCACAGCATACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQKPQHE*DHSIQS Trigger: GGACTGTATGCTGTGGTCTCACTCATGTTGTGGCTT...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGATCCATTATCTCTTCTaGGTTTCATCTTGTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAIHYLF*VSSCEV Trigger: AACCTCACAAGATGAAACTCAGAAGAGATAATGGAT...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACTTTGTCACCTAGGCTaGTCTCAAACTCTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQLCHLG*SQTLGL Trigger: GAGCCCAAGAGTTTGAGACCAGCCTAGGTGACAAAG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAGCAATGGTGCAATCTTaGCTCTCTGCAGCCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQAMVQS*LSAASN Trigger: GTTTGAGGCTGCAGAGAGCCAAGATTGCACCATTGC...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACTCTACTCACAGTCTTaGGTGTTGGCACTGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQLYSQS*VLALFE Trigger: CTCAAACAGTGCCAACACTCAAGACTGTGAGTAGAG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTTCCAAGGCAGGGCAGTaGTTCCCAAACCTGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCSKAGQ*FPNLAS Trigger: AGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGA...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCATAATCCACCAAACGTaGCAAGAATTGTGGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFIIHQT*QELWYP Trigger: AGGATACCACAATTCTTGGCACGTTTGGTGGATTAT...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAATCTTACTCTGCCCTTTaGCATCCCCATTCTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQSYSAL*HPHSYS Trigger: GGAGTAAGAATGGGGATGGCAAAGGGCAGAGTAAGA...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAAGTTGGATTAAACTGTaGCCACGCTCTACACAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQSWIKL*PRSTQV Trigger: GACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACT...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCATAATCAGGGAAATTTaGTTAAGGACTGGCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFIIREI*LRTGYE Trigger: CTCATAGCCAGTCCTTAAGCAAATTTCCCTGATTAT...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACCACACCTGACATATTaGACCCCTACTTTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQPHLTY*TPTFLL Trigger: GAGAAGAAAAGTAGGGGTGCAATATGTCAGGTGTGG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAAGGTTCCTCATGTTCTaGTGCCATTGCAGCAATTTG | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQRFLMF*CHCSNL Trigger: CAAATTGCTGCAATGGCACCAGAACATGAGGAACCT...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAATTTATTGCTTAATTTaGCATCCAAGGCAGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQIYCLI*HPRQGS Trigger: ACTGCCCTGCCTTGGATGGCAAATTAAGCAATAAAT...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCTGCAACACATTCCTTaGCCCCCTTCAGACCTAATG | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCLQHIP*PPSDLM Trigger: CATTAGGTCTGAAGGGGGCCAAGGAATGTGTTGCAG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAATGTGGTATCCTAACTTaGACTTTCAAGTTGGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQCGILT*TFKLAK Trigger: TTTTGCCAACTTGAAAGTTCAAGTTAGGATACCACA...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTAGTGATTCCCAAACCTaGCCTCTCGTCAGTATCATC | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCSDSQT*PLVSII Trigger: GATGATACTGACGAGAGGCCAGGTTTGGGAATCACT...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAAATTGCATTTAATAAATaGATAACTGGCCCCACACCT | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQIAFNK*ITGPTP Trigger: AGGTGTGGGGCCAGTTATCCATTTATTAAATGCAAT...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTGATTCCTCCTTCTTCTaGTTCTTGGCAATTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCDSSFF*FLAIAS Trigger: GGAAGCAATTGCCAAGAAGCAGAAGAAGGAGGAATC...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCTCGTCAGTATCATCTaGGAAAACTGCTGCAACACA | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCLVSII*ENCCNT Trigger: TGTGTTGCAGCAGTTTTCGCAGATGATACTGACGAG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACTTGAACTTTCAAGTTaGCAAAATAATTTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TAYSPVGLNCDHALHKSQLELSS*QNNFQW Trigger: CCACTGGAAATTATTTTGCCAACTTGAAAGTTCAAG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTTTCCTCATGTTCTGGTaGCATTGCAGCAATTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCFLMFW*HCSNLC Trigger: ACACAAATTGCTGCAATGGCACCAGAACATGAGGAA...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR GCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCAAATGAAGTTTGACTaGATTTTAAAGGCATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCQMKFD*ILKASH Trigger: GTGGGATGCCTTTAAAATGCAGTCAAACTTCATTTG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CCA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTACGTGCCAAGAATTGTaGTATCCTAACTTGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: SIISSEFHLVRFEGYTDCTCQEL*YPNLNF Trigger: AAAGTTCAAGTTAGGATACCACAATTCTTGGCACGT...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| 3UTR CAA 72 bp | AAAATCACATTTATAATCCACCAAACGTGCCAAGAATaGTGGTATCCTAACTTGAACTTTCAAGTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KITFIIHQTCQE*WYPNLNFQVGK Trigger: TTTGCCAACTTGAAAGTTCAAGTTAGGATACCACAATTCTTGGCACGTTTGGTGGATTATAAATGTGATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS CCA 90 bp | CCGCGCTCCTCCTTCGCCGCCGCCGCCGCGCCCGCCCCGACGAACTaGAGCGGAGGGAGGGGCACCGCGCAGCCGCGGGCGCAACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PRSSFAAAAAPAPTN*SGGRGTAQPRAQQV Trigger: AACTTGTTGCGCCCGCGGCTGCGCGGTGCCCCTCCCTCCGCTCCAGTTCGTCGGGGCGGGCGCGGCGGCGGCGGCGAAGGAGGAGCGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS GCA 90 bp | CCGCGGGCGCAACAAGTTCCTCACCCGCAGCCGCCGCCGCCGCCTTaGGCCCGCTCCCTTCCTTCCCTCCCCGCCCACCACCTAGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: PRAQQVPHPQPPPPP*ARSLPSLPAHHLGE Trigger: CTCGCCTAGGTGGTGGGCGGGGAGGGAAGGAAGGGAGCGGGCGCAAGGCGGCGGCGGCGGCTGCGGGTGAGGAACTTGTTGCGCCCGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTGCAATGGTGCAATCTaGGCTCTCTGCAGCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: IQGRAVIPKPGLSSVSSACNGAI*ALCSLK Trigger: TTTGAGGCTGCAGAGAGCCAAGATTGCACCATTGCA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGCAAACGTGCCAAGAATaGTGGTATCCTAACTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: IQGRAVIPKPGLSSVSSAQTCQE*WYPNLN Trigger: GTTCAAGTTAGGATACCACAATTCTTGGCACGTTTG...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGCAGGGCAGTGATTCCCAAACCTGGCCTCTCGTCAGTATCATCTGCGTGTAGAAATGACCAGTaGTCAAGTCTGCCTTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: IQGRAVIPKPGLSSVSSACRNDQ*SSLPLK Trigger: CTTTAAAGGCAGACTTGACAACTGGTCATTTCTACA...CGCAGATGATACTGACGAGAGGCCAGGTTTGGGAATCACTGCCCTGCCTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | ACAGCATACAGTCCAGTTGGATTAAACTGTGACCACGCTCTACACAAGTCCCAACTCTTACTCTGCCCTTaGCCATCCCCATTCTTACTC | + |
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Preference number: 5 (lower is better) Translates to: TAYSPVGLNCDHALHKSQLLLCP*PSPFLL Trigger: GAGTAAGAATGGGGATGGCAAAGGGCAGAGTAAGAG...TTGGGACTTGTGTAGAGCGTGGTCACAGTTTAATCCAACTGGACTGTATGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCAATTTATTGCTTAATTaGCCATCCAAGGCAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFNLLLN*PSKAGQ Trigger: CTGCCCTGCCTTGGATGGCAAATTAAGCAATAAATT...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | GTGACCACGCTCTACACAAGTCCCAATCAATTAGAGCCCATGGGGCTGAGATTCTTCTTCAAAAGTATCTaGCAAGGCCGTTATGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VTTLYTSPNQLEPMGLRFFFKSI*QGRYEV Trigger: TACCTCATAACGGCCTTGCAAGATACTTTTGAAGAA...GAATCTCAGCCCCATGGGCTCTAATTGATTGGGACTTGTGTAGAGCGTGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTGCTGGTCTCAAACTCTaGGGCTCAAGCGATCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SIISSEFHLVRFEGYTDCAGLKL*GSSDPP Trigger: AGGAGGATCGCTTGAGCCCAAGAGTTTGAGACCAGC...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTCCCACACCTGACATATaGCACCCCTACTTTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SIISSEFHLVRFEGYTDCPTPDI*HPYFSS Trigger: AGAAGAAAAGTAGGGGTGCAATATGTCAGGTGTGGG...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS-3UTR CAA 90 bp | TCCATTATCTCTTCTGAGTTTCATCTTGTGAGGTTTGAAGGGTACACTGATTGTTTGTGGTATCCTAACTaGAACTTTCAAGTTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: SIISSEFHLVRFEGYTDCLWYPN*NFQVGK Trigger: TTTGCCAACTTGAAAGTTCAAGTTAGGATACCACAA...ACAATCAGTGTACCCTTCAAACCTCACAAGATGAAACTCAGAAGAGATAATGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS CAA 90 bp | GCCGCGGGCGCAACAAGTTCCTCACCCGCAGCCGCCGCCGCCGCCTaGCGCCCGCTCCCTTCCTTCCCTCCCCGCCCACCACCTAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: AAGATSSSPAAAAAA*RPLPSFPPRPPPRR Trigger: TCGCCTAGGTGGTGGGCGGGGAGGGAAGGAAGGGAGCGGGCGCAAGGCGGCGGCGGCGGCTGCGGGTGAGGAACTTGTTGCGCCCGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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| CDS CAA 72 bp | GCAACAAGTTCCTCACCCGCAGCCGCCGCCGCCGCCTaGCGCCCGCTCCCTTCCTTCCCTCCCCGCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: ATSSSPAAAAAA*RPLPSFPPRPP Trigger: TGGTGGGCGGGGAGGGAAGGAAGGGAGCGGGCGCAAGGCGGCGGCGGCGGCTGCGGGTGAGGAACTTGTTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398675.8 |
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