RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GVQW3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179240

Ensembl transcript IDs: ENST00000321844.6, ENST00000529331.2, ENST00000530460.2, ENST00000531207.5, ENST00000531785.1, ENST00000534586.1, ENST00000607673.2, ENST00000662483.1, ENST00000663165.1, ENST00000667240.1, ENST00000673806.1

Found 1450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTTGTaGAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTAAGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: DPLHLCRAPTQDQAL*KMHRARGAPSLRKE
Trigger: TTCCTTCCTTAGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 90 bp ACAGGACTGCTGAGTCTGAACTGTCCGCACCTCCCAACCCCTGCCTaGCTTGAACTTGGAGGTGAGGGCAGGGTGTCACAGCCATCTTGT +
Preference number: 1 (lower is better)
Translates to: TGLLSLNCPHLPTPA*LELGGEGRVSQPSC
Trigger: ACAAGATGGCTGTGACACCCTGCCCTCACCTCCAAGTTCAAGGCAGGCAGGGGTTGGGAGGTGCGGACAGTTCAGACTCAGCAGTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 90 bp CTAGAGGCCTCTAGGACTCCAGCTGACATGATGCAGTGTGTACCCTaGACGTTGCAGCCTCTTCCCAGGCTGGCTGTGGAAACTGAGCCT +
Preference number: 1 (lower is better)
Translates to: LEASRTPADMMQCVP*TLQPLPRLAVETEP
Trigger: AGGCTCAGTTTCCACAGCCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACACTGCATCATGTCAGCTGGAGTCCTAGAGGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 90 bp TGCCATGGCCTGGGCTTCCTCCTTCTACCTGATGTGCAGGATGCTTaGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATG +
Preference number: 1 (lower is better)
Translates to: CHGLGFLLLPDVQDA*YSPSLPTSCLSLEM
Trigger: CATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAGCCCAGGCCATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp AAGATCAGTATTGGTGGCCAACCCCTGATTCCTAAGGGTGCCTACTaGGTCATCTGGGCCAGATCAGCCCCTAGGCCCAGCACTGTTCAG +
Preference number: 1 (lower is better)
Translates to: KISIGGQPLIPKGAY*VIWARSAPRPSTVQ
Trigger: CTGAACAGTGCTGGGCCTAGGGGCTGATCTGGCCCAGATGACTCAGTAGGCACCCTTAGGAATCAGGGGTTGGCCACCAATACTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 90 bp AAGTTCCTTGCCATCGTGCTCCAGGGTTGGTGTCATTGCCACATCTaGTCAAGCTGTTACCCTGGCTGGGGAGGTATGGCTGTGACCTGG +
Preference number: 1 (lower is better)
Translates to: KFLAIVLQGWCHCHI*SSCYPGWGGMAVTW
Trigger: CCAGGTCACAGCCATACCTCCCCAGCCAGGGTAACAGCTTGATCAGATGTGGCAATGACACCAACCCTGGAGCACGATGGCAAGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 90 bp TTGCCCAAACCCAGCAGGACTCAACAGGTAAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTGATGTGCAGGATGCTTGGTATTCCC +
Preference number: 1 (lower is better)
Translates to: LPKPSRTQQVSPAMA*ASSFYLMCRMLGIP
Trigger: GGGAATACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACTTACCTGTTGAGTCCTGCTGGGTTTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp CCAGTTCATCAAAAGCTCCTATGTGCCTGGCTCCATCACCGCAGCTaGGGAACTACTGTATGTGGAGCAGGCAGCACATCAGAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: PVHQKLLCAWLHHRS*GTTVCGAGSTSEEQ
Trigger: CTGCTCCTCTGATGTGCTGCCTGCTCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTGATGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR GCA 90 bp CACCTCCTGCCTGAGCTTGGAGATGCTTCTGGGTGGTGGAGGAAATaGTTATTGACTTCCACATCTTTCCAGCCAAATGCTCCTACCGGG +
Preference number: 1 (lower is better)
Translates to: HLLPELGDASGWWRK*LLTSTSFQPNAPTG
Trigger: CCCGGTAGGAGCATTTGGCTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 90 bp TTTCTTCAGTTAGACTCAGTCACCCCCATTGATCCCCTGCACCTTTaGAGGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGG +
Preference number: 1 (lower is better)
Translates to: FLQLDSVTPIDPLHL*RAPTQDQALCKMHR
Trigger: CCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGACTGAGTCTAACTGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 90 bp CTGGACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTaGTCCAGCATCACTGGCAGGGACATACCAGCCCTGTTCATAGGA +
Preference number: 1 (lower is better)
Translates to: LDQHSFWYSTLHHGS*SSITGRDIPALFIG
Trigger: TCCTATGAACAGGGCTGGTATGTCCCTGCCAGTGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTaGCCCACAGTTTCCATCACCCTCTCCATGGATGACTCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: KFKLGHIHTGAQHRA*PTVSITLSMDDSQL
Trigger: GAGCTGGGAGTCATCCATGGAGAGGGTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 90 bp GTGGGGGCGGGGACAAAGATCAACCTGAAAGCCAAACGGAGTCATTaGCCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTC +
Preference number: 1 (lower is better)
Translates to: VGAGTKINLKAKRSH*PMVLSLRKFADGQL
Trigger: GAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCCCCGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 90 bp CTTTGTGGACTTAACACCTGCCATCCTGCCCCAGGCAAGGACTCCTaGCAACTGGCTCCAGAAAAGGTCATTTATCAACCGTGTTTAGGC +
Preference number: 1 (lower is better)
Translates to: LCGLNTCHPAPGKDS*QLAPEKVIYQPCLG
Trigger: GCCTAAACACGGTTGATAAATGACCTTTTCTGGAGCCAGTTGGCAGGAGTCCTTGCCTGGGGCAGGATGGCAGGTGTTAAGTCCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR GCA 90 bp GATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCTaGCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAGT +
Preference number: 1 (lower is better)
Translates to: DFIHLPMLVSLSGVP*LVLPDRAKPCPSFS
Trigger: ACTGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 90 bp TTAACACTTGGGGCCAGTACAGCCAGTTCATCAAAAGCTCCTATGTaGCTGGCTCCATCACCGCAGCTGAGGAACTACTGTATGTGGAGC +
Preference number: 1 (lower is better)
Translates to: LTLGASTASSSKAPM*LAPSPQLRNYCMWS
Trigger: GCTCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTGATGAACTGGCTGTACTGGCCCCAAGTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR CCA 90 bp CCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTGACTTCCACATCTTTCCAGCCAAAT +
Preference number: 1 (lower is better)
Translates to: PFTAHLLPELGDASG*WRKCLLTSTSFQPN
Trigger: ATTTGGCTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 90 bp AGCCAAACGGAGTCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTaGAGATGGCCAGCTCTCCTACTGACATCCCACAGAAAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: SQTESLTDGVKLEKV*RWPALLLTSHRKPG
Trigger: GCCTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 90 bp CCTGTGACCCATGCCAAGAGGCTTAAGTTAAGTTCCTTGCCATCGTaGTCCAGGGTTGGTGTCATTGCCACATCTGATCAAGCTGTTACC +
Preference number: 1 (lower is better)
Translates to: PVTHAKRLKLSSLPS*SRVGVIATSDQAVT
Trigger: GGTAACAGCTTGATCAGATGTGGCAATGACACCAACCCTGGAGCACGATGGCAAGGAACTTAACTTAAGCCTCTTGGCATGGGTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 90 bp CCAACCCAAGTCAACATGATGGCAGAGCGGTCGAAGCTTTTCCTCTaGCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGA +
Preference number: 1 (lower is better)
Translates to: PTQVNMMAERSKLFL*HMMPVVNGDHVICG
Trigger: TCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAAAGCTTCGACCGCTCTGCCATCATGTTGACTTGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 90 bp TTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTTCTGGGTGGTaGAGGAAATGCTTATTGACTTCCACATCTTTCCAGCCAAATGCT +
Preference number: 1 (lower is better)
Translates to: FTAHLLPELGDASGW*RKCLLTSTSFQPNA
Trigger: AGCATTTGGCTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 90 bp CTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCACTaGCAGGGACATACCAGCCCTGTTCATAGGACTGGAATAAAATCC +
Preference number: 1 (lower is better)
Translates to: LLVLYTPPWVLVQHH*QGHTSPVHRTGIKS
Trigger: GGATTTTATTCCAGTCCTATGAACAGGGCTGGTATGTCCCTGCCAGTGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 90 bp GCCATTTGCTCCTTGTTACCTACCACTGCAGCTCCCTTGGGCCAATaGGATTTAGTAGAACTCTGCTGGGAGTTACTGGGAGAGCTTTTG +
Preference number: 1 (lower is better)
Translates to: AICSLLPTTAAPLGQ*DLVELCWELLGELL
Trigger: CAAAAGCTCTCCCAGTAACTCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAGGAGCAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp TCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTaGCTCCAAGACAAGACTTTAGAGGGGCAGTTGAAGGGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: SPSLFFLHQAHLDLM*LQDKTLEGQLKGRV
Trigger: CACCCTCCCCTTCAACTGCCCCTCTAAAGTCTTGTCTTGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp GATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACAAAGGAACAGGACAGCCACAACAAG +
Preference number: 1 (lower is better)
Translates to: DSRRSCSSLLTGMIL*GRRLRTKEQDSHNK
Trigger: CTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR TCA 90 bp GCCACATCTGATCAAGCTGTTACCCTGGCTGGGGAGGTATGGCTGTaGCCTGGCCTTCCCAGCTCAAGAATTTTTGCATCTAATGGTATT +
Preference number: 1 (lower is better)
Translates to: ATSDQAVTLAGEVWL*PGLPSSRIFASNGI
Trigger: AATACCATTAGATGCAAAAATTCTTGAGCTGGGAAGGCCAGGTCACAGCCATACCTCCCCAGCCAGGGTAACAGCTTGATCAGATGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 90 bp GTTGACTGGCTACCCAAAAGCCATTTGCTCCTTGTTACCTACCACTaGAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: VDWLPKSHLLLVTYH*SSLGPMRFSRTLLG
Trigger: TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAGGAGCAAATGGCTTTTGGGTAGCCAGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 90 bp ACGGAGTCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATaGCCAGCTCTCCTACTGACATCCCACAGAAAGCCAGGCTTGATC +
Preference number: 1 (lower is better)
Translates to: TESLTDGVKLEKVCR*PALLLTSHRKPGLI
Trigger: GATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 90 bp AGAGCGGTCGAAGCTTTTCCTCTGCCACATGATGCCAGTTGTCAATaGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACACCTGG +
Preference number: 1 (lower is better)
Translates to: RAVEAFPLPHDASCQ*RSCYLRKVPLHDTW
Trigger: CCAGGTGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAAAGCTTCGACCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 90 bp TGCAGTGAGCTACAATCAACTGCGCTCCAGCCTGGACAACAGTACTaGTCTGATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGG +
Preference number: 1 (lower is better)
Translates to: CSELQSTALQPGQQY*SDLLPYSFFIKPTW
Trigger: CCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCGCAGTTGATTGTAGCTCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp AGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCTCATaGCTTCATCGTTACTCTGTGGATAGCCCCAGGGACAGGTGTCAA +
Preference number: 1 (lower is better)
Translates to: RWRYDSSTQLLNLLS*LHRYSVDSPRDRCQ
Trigger: TTGACACCTGTCCCTGGGGCTATCCACAGAGTAACGATGAAGTCATGAGAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 90 bp TTTAGCAGCAAAGGTGGGCTCTTATTGAGTCACATGGGACCTTGCTaGGACCCAATCCCAACGAGCCTAGTGAAACTCTCTGGTGATGAT +
Preference number: 1 (lower is better)
Translates to: FSSKGGLLLSHMGPC*DPIPTSLVKLSGDD
Trigger: ATCATCACCAGAGAGTTTCACTAGGCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTTGCTGCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 90 bp GGAGGAGTGGTGAAGACTGAAAAATACGTGAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCATCCTAGTTCTGGTTCAGCTAACTCA +
Preference number: 1 (lower is better)
Translates to: GGVVKTEKYVSSQRR*LTVRQHPSSGSANS
Trigger: TGAGTTAGCTGAACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR CCA 90 bp CAAGATCATATAGCCTCTGTGTCCACCCAGCCAGTTAATTGTTCATaGACCAAACTAGTGATCTGGCCTCAATCTCTCCACTGCCAGCTC +
Preference number: 1 (lower is better)
Translates to: QDHIASVSTQPVNCS*TKLVIWPQSLHCQL
Trigger: GAGCTGGCAGTGGAGAGATTGAGGCCAGATCACTAGTTTGGTCCATGAACAATTAACTGGCTGGGTGGACACAGAGGCTATATGATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 90 bp CAGGTTAGAAACAACTCCTGTAGGTATGGTTGTGGGATCCTGGCCTaGGACCAGGAGCATATAAATCTGCAACAATTACCACTGGGTAGG +
Preference number: 1 (lower is better)
Translates to: QVRNNSCRYGCGILA*DQEHINLQQLPLGR
Trigger: CCTACCCAGTGGTAATTGTTGCAGATTTATATGCTCCTGGTCCCAGGCCAGGATCCCACAACCATACCTACAGGAGTTGTTTCTAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 90 bp AGCTCTCCTACTGACATCCCACAGAAAGCCAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGG +
Preference number: 1 (lower is better)
Translates to: SSPTDIPQKARLDLL*LGGVSPARENTVAR
Trigger: CCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 90 bp AAGTCCGGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTaGGGCCAGTACAGCCAGTTCATCAAAAGCTCCTATGTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: KSGASLVMSDDIVNT*GQYSQFIKSSYVPG
Trigger: GCCAGGCACATAGGAGCTTTTGATGAACTGGCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCCGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 90 bp GGTGATGGAAGGGGAGAATTGCATAAAATCAGTGTTAGGATGATCTaGCCCAGAAGGCATGTATTCCTCTTAGACGCTCAGCTGTGGCAT +
Preference number: 1 (lower is better)
Translates to: GDGRGELHKISVRMI*PRRHVFLLDAQLWH
Trigger: ATGCCACAGCTGAGCGTCTAAGAGGAATACATGCCTTCTGGGGCAGATCATCCTAACACTGATTTTATGCAATTCTCCCCTTCCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR TCA 90 bp GAACAAAAAGATAGAAGGGCAAATTTGTTCTCGCTTCTTGAGCTGTaGCATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTC +
Preference number: 1 (lower is better)
Translates to: EQKDRRANLFSLLEL*HPSSPALVHQHSSL
Trigger: GAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGAGAACAAATTTGCCCTTCTATCTTTTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
3UTR TCA 90 bp GGAAGGAGGCCCCAGGTAAACATTCTTCCCCAAATAACATTTCAATaGGGACTCAGTGAGGATCAGAATTCAGAAGATGGCAGAACCCTC +
Preference number: 1 (lower is better)
Translates to: GRRPQVNILPQITFQ*GLSEDQNSEDGRTL
Trigger: GAGGGTTCTGCCATCTTCTGAATTCTGATCCTCACTGAGTCCTCATTGAAATGTTATTTGGGGAAGAATGTTTACCTGGGGCCTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR TCA 90 bp AGACTGGCCAATTCTGTGAAATGCTATTACCAAACCCCTGCCCCCTaGATGTTTCCAGTCTATGTGGTATTACTTGGAACCCACTTGGGA +
Preference number: 1 (lower is better)
Translates to: RLANSVKCYYQTPAP*MFPVYVVLLGTHLG
Trigger: TCCCAAGTGGGTTCCAAGTAATACCACATAGACTGGAAACATTCAGGGGGCAGGGGTTTGGTAATAGCATTTCACAGAATTGGCCAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR GCA 90 bp CACGGACTGAGCGAAGTTCAAGGTCCTTCATTATTATCCTGGCTCTaGCACCAACTAAATGTGCGATTCAAGAAAATCACTCAACCTCCC +
Preference number: 1 (lower is better)
Translates to: HGLSEVQGPSLLSWL*HQLNVRFKKITQPP
Trigger: GGGAGGTTGAGTGATTTTCTTGAATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACTTCGCTCAGTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 90 bp GGAGCTGTTAGGAAGCCTCAAGAAACAGAAGAAATTATTCTCTATTaGGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTATA +
Preference number: 1 (lower is better)
Translates to: GAVRKPQETEEIILY*ARTPCQVLCCVPRI
Trigger: TATACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCCCAATAGAGAATAATTTCTTCTGTTTCTTGAGGCTTCCTAACAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 90 bp CCCCCTGAATGTTTCCAGTCTATGTGGTATTACTTGGAACCCACTTaGGAAAAGTTCCATTCCATAAATCCTGGCAGAGGCAGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: PPECFQSMWYYLEPT*EKFHSINPGRGRKR
Trigger: TCTCTTCCTGCCTCTGCCAGGATTTATGGAATGGAACTTTTCCCAAGTGGGTTCCAAGTAATACCACATAGACTGGAAACATTCAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 90 bp ACACTCCTAATTACCTGCTTCTGGTTGCTGTGTCTAAACCATGTCTaGACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTT +
Preference number: 1 (lower is better)
Translates to: TLLITCFWLLCLNHV*TNIASGTLHSTMGL
Trigger: AAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTCCAGACATGGTTTAGACACAGCAACCAGAAGCAGGTAATTAGGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 90 bp TCTATGCATGGGCTCTCTGGGAAAGCTGTTGAGATTTTAGGCGGATaGCCAATTGGTTTTTATGTCCATTTGAAAGAGGCAGGAAGAGGA +
Preference number: 1 (lower is better)
Translates to: SMHGLSGKAVEILGG*PIGFYVHLKEAGRG
Trigger: TCCTCTTCCTGCCTCTTTCAAATGGACATAAAAACCAATTGGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAGAGCCCATGCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 90 bp AAATGGATGACAGAATGCCAACATTTACTTATGAATACGCACCTCTaGAAGGACCAGGGGACCTGGACACCCCAGAGAAATTTGGTAAAA +
Preference number: 1 (lower is better)
Translates to: KWMTECQHLLMNTHL*KDQGTWTPQRNLVK
Trigger: TTTTACCAAATTTCTCTGGGGTGTCCAGGTCCCCTGGTCCTTCCAGAGGTGCGTATTCATAAGTAAATGTTGGCATTCTGTCATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR TCA 90 bp TTCTTTACAAAAGTTTGTTCCTTAGCTCTGTCCTCTGGGAAAAATTaGCAGTCTAAGGTAGGAACCCTTTCTTGGTGCTCCTCTCCACCT +
Preference number: 1 (lower is better)
Translates to: FFTKVCSLALSSGKN*QSKVGTLSWCSSPP
Trigger: AGGTGGAGAGGAGCACCAAGAAAGGGTTCCTACCTTAGACTGTCAATTTTTCCCAGAGGACAGAGCTAAGGAACAAACTTTTGTAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR GCA 90 bp TCAGAGGAGCAGCACCAGAGTGCTTCCAAATTGGTTTTGATTAATTaGATAGACATGTCTTTAATTGGTGCCAGTGTAGCAGCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: SEEQHQSASKLVLIN*IDMSLIGASVAARE
Trigger: TTCTCTGGCTGCTACACTGGCACCAATTAAAGACATGTCTATGCAATTAATCAAAACCAATTTGGAAGCACTCTGGTGCTGCTCCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR GCA 90 bp CCTCAAGAAACAGAAGAAATTATTCTCTATTGGGCACGTACTCCATaGCAGGTGTTGTGCTGTGTGCCTCGTATACACAGAAGAAATTAT +
Preference number: 1 (lower is better)
Translates to: PQETEEIILYWARTP*QVLCCVPRIHRRNY
Trigger: ATAATTTCTTCTGTGTATACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCCCAATAGAGAATAATTTCTTCTGTTTCTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 90 bp AAGGTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAACTTGTTGAGCAAAAGAAATCAAGA +
Preference number: 1 (lower is better)
Translates to: KVENKGTGQPQQAKV*AEKKSKLVEQKKSR
Trigger: TCTTGATTTCTTTTGCTCAACAAGTTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR CCA 90 bp AAAACTCACGGACTGAGCGAAGTTCAAGGTCCTTCATTATTATCCTaGCTCTGCCACCAACTAAATGTGCGATTCAAGAAAATCACTCAA +
Preference number: 1 (lower is better)
Translates to: KTHGLSEVQGPSLLS*LCHQLNVRFKKITQ
Trigger: TTGAGTGATTTTCTTGAATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACTTCGCTCAGTCCGTGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR TCA 90 bp TTGAGTTCTTCCTCTTTCTATGCATGGGCTCTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACCAATTGGTTTTTATGTCCATTTGAA +
Preference number: 1 (lower is better)
Translates to: LSSSSFYAWALWESC*DFRRMTNWFLCPFE
Trigger: TTCAAATGGACATAAAAACCAATTGGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 90 bp GTAGGTGCTCAATCAATGTATGGAATGACATTAATTTACAACGGTTaGGTTCTTCCTCTTTCTATGCATGGGCTCTCTGGGAAAGCTGTT +
Preference number: 1 (lower is better)
Translates to: VGAQSMYGMTLIYNG*VLPLSMHGLSGKAV
Trigger: AACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAACTCAACCGTTGTAAATTAATGTCATTCCATACATTGATTGAGCACCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 90 bp CTGTCTACTCCCATAGGAAACAGGAGGAATCTTTTTCAGAATATTTaGTCCAGCAAAAATTGTCCATCAAGGCTAACAATGGAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: LSTPIGNRRNLFQNI*SSKNCPSRLTMERR
Trigger: CCTTCTCTCCATTGTTAGCCTTGATGGACAATTTTTGCTGGAGCAAATATTCTGAAAAAGATTCCTCCTGTTTCCTATGGGAGTAGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 90 bp CATTCATATCCTTTTCCACTTGTCAGAATATACTTGATTCATAAGTaGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCC +
Preference number: 1 (lower is better)
Translates to: HSYPFPLVRIYLIHK*SFTDLRLHHKSMPA
Trigger: GGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACCACTTATGAATCAAGTATATTCTGACAAGTGGAAAAGGATATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR TCA 90 bp TTAGATGCCTGGATGTCCTGTATGGGATTTTATAGAGAAGCAGATTaGACACAAAACCTATTTCCGCACTTAAAGTTCTATGGCTTTGGC +
Preference number: 1 (lower is better)
Translates to: LDAWMSCMGFYREAD*TQNLFPHLKFYGFG
Trigger: GCCAAAGCCATAGAACTTTAAGTGCGGAAATAGGTTTTGTGTTCAATCTGCTTCTCTATAAAATCCCATACAGGACATCCAGGCATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 90 bp TTCCTATGGCAATTGCATTTGTCTGCAGTACATTATAGTTATTTATaGCCAGCTCTGTTTCTCCTACTAAATGGTGAGCTTCTCAAGGTG +
Preference number: 1 (lower is better)
Translates to: FLWQLHLSAVHYSYL*PALFLLLNGELLKV
Trigger: CACCTTGAGAAGCTCACCATTTAGTAGGAGAAACAGAGCTGGGCATAAATAACTATAATGTACTGCAGACAAATGCAATTGCCATAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 90 bp CCTCAGAAAAGATATAAACGCCTGGTAAAATCTGGGTGGGCTGACTaGAGAAGAAGTAATTGGAGAATGCACAGTAACATACACAATTTA +
Preference number: 1 (lower is better)
Translates to: PQKRYKRLVKSGWAD*RRSNWRMHSNIHNL
Trigger: TAAATTGTGTATGTTACTGTGCATTCTCCAATTACTTCTTCTTCAGTCAGCCCACCCAGATTTTACCAGGCGTTTATATCTTTTCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 90 bp GCTCTCTTACATAAGAAGAGCTACAGTTACCATCATTCTGTGTTTTaGTTCTTTACAGTCCACTGTCTCTTTTTCACAATCACCCTTAGT +
Preference number: 1 (lower is better)
Translates to: ALLHKKSYSYHHSVF*FFTVHCLFFTITLS
Trigger: ACTAAGGGTGATTGTGAAAAAGAGACAGTGGACTGTAAAGAAGCAAAACACAGAATGATGGTAACTGTAGCTCTTCTTATGTAAGAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 90 bp GGTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTaGTTGCAGCTTGGCATCAGTTTTAGTGTTGCCAACACTGGTTTT +
Preference number: 1 (lower is better)
Translates to: GQIIFGTTFSSFYYC*LQLGISFSVANTGF
Trigger: AAAACCAGTGTTGGCAACACTAAAACTGATGCCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 90 bp CTTGGGTTTAGAAATTCTGAGCAGCCAAATGTGAATGGTTTGCTCTaGATAAGTCCTTTTCATTATAGCCAATTGGAACCATTTGAATTC +
Preference number: 1 (lower is better)
Translates to: LGFRNSEQPNVNGLL*ISPFHYSQLEPFEF
Trigger: GAATTCAAATGGTTCCAATTGGCTATAATGAAAAGGACTTATCCAGAGCAAACCATTCACATTTGGCTGCTCAGAATTTCTAAACCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 90 bp GATAACATAAGCTTATTCAAATGCTACCCATGGTCAAATCATTTTTaGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGG +
Preference number: 1 (lower is better)
Translates to: DNISLFKCYPWSNHF*DYLQFILLLLVAAW
Trigger: CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGACCATGGGTAGCATTTGAATAAGCTTATGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGTGTACCCTGCACGTTaGAGCCTCTTCCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFVYPAR*SLFPGW
Trigger: CCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACAC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp GCCTCTAGGACTCCAGCTGACATGATGCAGTGTGTACCCTGCACGTaGCAGCCTCTTCCCAGGCTGGCTGTGGAAACTGAGCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: ASRTPADMMQCVPCT*QPLPRLAVETEPPP
Trigger: TGGAGGAGGCTCAGTTTCCACAGCCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACACTGCATCATGTCAGCTGGAGTCCTAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACACCCTCTCCATGGATaGCTCCCAGCTCCAACGCTA +
Preference number: 2 (lower is better)
Translates to: LECPASFFLTELSPAHPSHPLHG*LPAPTL
Trigger: TAGCGTTGGAGCTGGGAGTCATCCATGGAGAGGGTG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTCCCCCATTGATCCCCTaGACCTTTGCAGGGCACCTA +
Preference number: 2 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSPPLIP*TFAGHL
Trigger: TAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGG...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGCTGGCTGTGGAAACTaGGCCTCCTCCAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLAGCGN*ASSRQQ
Trigger: CTGCTGTCTGGAGGAGGCTCAGTTTCCACAGCCAGC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTCTCTGCTGAGACATTaGCCAAACCCAGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQASLLRH*PNPAGL
Trigger: GAGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGA...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 90 bp GTCCCTTCTCCTCCTGGGCAGGTCCTTTTCCCTTCTGTCCCAGCCTaGCTGCCAACACAAGATCATATAGCCTCTGTGTCCACCCAGCCA +
Preference number: 2 (lower is better)
Translates to: VPSPPGQVLFPSVPA*LPTQDHIASVSTQP
Trigger: TGGCTGGGTGGACACAGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGACCTGCCCAGGAGGAGAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCGGACTCCAGCTGACATaGTGCAGTGTGTACCCTGCA +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSGLQLT*CSVYPA
Trigger: TGCAGGGTACACACTGCATCATGTCAGCTGGAGTCC...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATTGGAATTGCTGAGGTaGCAAGGGCACAAGCAACCC +
Preference number: 2 (lower is better)
Translates to: LECPASFFLTELSPAHPSLELLR*QGHKQP
Trigger: GGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCTTGGAATTGCTGAGGTaGCAAGGGCACAAGCAACCC +
Preference number: 2 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCLELLR*QGHKQP
Trigger: GGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAA...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCAGTGTTAGGATGATCTaGCCCAGAAGGCATGTATTC +
Preference number: 2 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGSVRMI*PRRHVF
Trigger: GAATACATGCCTTCTGGGGCAGATCATCCTAACACT...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCCCATCACCCTCTCCATaGATGACTCCCAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSPSPSP*MTPSSN
Trigger: GTTGGAGCTGGGAGTCATCCATGGAGAGGGTGATGG...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGGGTCACATTCACACTaGCGCCCAACACAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLGSHSH*RPTQSL
Trigger: CAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTGCTCTTGGAATTGCTaGGGTGACAAGGGCACAAGC +
Preference number: 2 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMACSWNC*GDKGTS
Trigger: GCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGGGATTTTCTCTGACTaGGGGACAGAGGCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLGIFSD*GTEAKV
Trigger: CACCTTGGCCTCTGTCCCTCAGTCAGAGAAAATCCC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTCCTTCTACCTGATGTaGAGGATGCTTGGTATTCCC +
Preference number: 2 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQASFYLM*RMLGIP
Trigger: GGGAATACCAAGCATCCTGCACATCAGGTAGAAGGA...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTCAACAGGTAAGTCCTaGCATGGCCTGGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCSTGKS*HGLGFL
Trigger: GAGGAAGCCCAGGCCATGGCAGGACTTACCTGTTGA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTCAAAAGCTCCTATGTaGCTGGCTCCATCACCGCAG +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSSKAPM*LAPSPQ
Trigger: CTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTGA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR CAA 90 bp CCTCAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGCATGCTTCCCTGGGCACAGAGATAC +
Preference number: 2 (lower is better)
Translates to: PQALTAKQAETVSLL*GSSQKSMLPWAQRY
Trigger: GTATCTCTGTGCCCAGGGAAGCATGCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCATGGCAGACCCTGTTaGCTGGCTACCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMHGRPC*LATQKP
Trigger: TGGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGACTTTGAATTAGAATaGGCGTGGGGGCGGGGACAA +
Preference number: 2 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQDFELE*AWGRGQ
Trigger: TTGTCCCCGCCCCCACGCTCATTCTAATTCAAAGTC...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTTCTCCTACTAAATGGTaGGCTTCTCAAGGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFSPTKW*ASQGGQ
Trigger: TTGGCCACCTTGAGAAGCTCACCATTTAGTAGGAGA...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAGCCCAAGTGAGTCCTTaGAGGGGACCCACTGGAGCT +
Preference number: 2 (lower is better)
Translates to: GGVSPARENTVARRMGFGAQVSP*RGPTGA
Trigger: AGCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGC...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGCAGCCTGGACCTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSAAWTS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGGTCCAGGCTGC...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTATTCCCAGGCTGGCTGTaGAAACTGAGCCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVFPGWL*KLSLLQ
Trigger: CTGGAGGAGGCTCAGTTTCCACAGCCAGCCTGGGAA...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp GAAGGAAGTGAAAAGCCTGAGAGTATGCCAGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACTCAACAGGTAAGTCCTGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: EGSEKPESMPVSAET*PKPSRTQQVSPAMA
Trigger: GGCCATGGCAGGACTTACCTGTTGAGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGACTGGCATACTCTCAGGCTTTTCACTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 90 bp TCTCAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGCATGCTTCCCTGGGCACAGAGATAC +
Preference number: 2 (lower is better)
Translates to: SQALTAKQAETVSLL*GSSQKSMLPWAQRY
Trigger: GTATCTCTGTGCCCAGGGAAGCATGCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR CAA 90 bp GCCAGCTCTCCTACTGACATCCCACAGAAAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCTCCTCAGGCCCTGACTGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: ASSPTDIPQKARLDL*WLGGVSPQALTAKQ
Trigger: CTGCTTTGCAGTCAGGGCCTGAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTGGCCAGCTCTCCTACTaGCATCCCACAGAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASGQLSY*HPTESQ
Trigger: CTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCC...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTGGCCAGCTCTCCTACTaGCATCCCACAGAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: GLLPTYDYITRACQPQCLGQLSY*HPTESQ
Trigger: CTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCC...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCCCAATTGGAACCATTTaGATTCACACTCCTAATTAC +
Preference number: 2 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGPIGTI*IHTPNY
Trigger: GTAATTAGGAGTGTGAATTCAAATGGTTCCAATTGG...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCAGGACCAGGCTTTGTaGAAGATGCACAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMQDQAL*KMHRAR
Trigger: TCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAGTGTACCCTGCACGTTaGAGCCTCTTCCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPVYPAR*SLFPGW
Trigger: CCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACAC...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTAATGCAGTGTGTACCCTaGACGTTGCAGCCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVMQCVP*TLQPLP
Trigger: GGGAAGAGGCTGCAACGTGCAGGGTACACACTGCAT...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCATGTCTTTAATTGGTaGCAGTGTAGCAGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFHVFNW*QCSSQR
Trigger: TCTCTGGCTGCTACACTGGCACCAATTAAAGACATG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR-3UTR CCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCAAAGTTCAGGTCTTTaGCAAGCCTCACACTTTTGC +
Preference number: 2 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCQSSGL*QASHFC
Trigger: GCAAAAGTGTGAGGCTTGCCAAAGACCTGAACTTTG...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp CGTGGGGGCGGGGACAAAGATCAACCTGAAAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RGGGDKDQPESQTES*TDGVKLEKVCRWPA
Trigger: AGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCCCCGCCCCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTTGGATCATGGGGTACTaGGATAGATGGGAAAACATT +
Preference number: 2 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSWIMGY*DRWENI
Trigger: AATGTTTTCCCATCTATCTCAGTACCCCATGATCCA...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAAAACTAACAGGTGTTaGCCCGGCGTGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASKTNRC*PGVVAH
Trigger: GTGAGCCACCACGCCGGGTCAACACCTGTTAGTTTT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAGCTGGCTGTGGAAACTaGGCCTCCTCCAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKAGCGN*ASSRQQ
Trigger: CTGCTGTCTGGAGGAGGCTCAGTTTCCACAGCCAGC...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTTCCAATGTTACAGCTaGGGAAACCAAGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSFQCYS*GNQGSE
Trigger: TTCTGAGCCTTGGTTTCCTCAGCTGTAACATTGGAA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCCAGGACCAGGCTTTGTaGAAGATGCACAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLQDQAL*KMHRAR
Trigger: TCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTG...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCTTCAAGCAATTCTCCTaGCTCAGCCTCTCGGGTAGC +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIFKQFS*LSLSGS
Trigger: GCTACCCGAGAGGCTGAGGCAGGAGAATTGCTTGAA...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCACACAACACAGCCTTaGCTGGGTCCCCGGGTTTAT +
Preference number: 2 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSHTTQP*LGPRVY
Trigger: ATAAACCCGGGGACCCAGGCAAGGCTGTGTTGTGTG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATCCAGACAGCAGGGCTaGTCCGCTCACGCGGATCAA +
Preference number: 2 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKSRQQG*SAHADQ
Trigger: TTGATCCGCGTGAGCGGAGCAGCCCTGCTGTCTGGA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCCACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 2 (lower is better)
Translates to: QALTAKQAETVSLLLGSSHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR CCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTACCTTTTAGATGCCTaGATGTCCTGTATGGGATTT +
Preference number: 2 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAYLLDA*MSCMGF
Trigger: AAATCCCATACAGGACATCCAGGCATCTAAAAGGTA...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGGATGCTTCTGGGTGGTaGAGGAAATGCTTATTGACT +
Preference number: 2 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLDASGW*RKCLLT
Trigger: AGTCAATAAGCATTTCCTCCACCACCCAGAAGCATC...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAGATGTGCAGGATGCTTaGTATTCCCCTTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGDVQDA*YSPSLP
Trigger: GGGCAGTGAAGGGGAATACCAAGCATCCTGCACATC...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTG +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSSPAMA*ASSFYL
Trigger: CAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACT...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGGGGTGGAACATAGCATaGCAATGGAAAGAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMGWNIA*QWKEPS
Trigger: TGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCC...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAGCAGCCTGGACCTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLAAWTS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGGTCCAGGCTGC...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTTTGGTCCAGCATCACTaGCAGGGACATACCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GLLPTYDYITRACQPQCLLVQHH*QGHTSP
Trigger: AGGGCTGGTATGTCCCTGCCAGTGATGCTGGACCAA...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCCAAAGTTCAGGTCTTTaGCAAGCCTCACACTTTTGC +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSQSSGL*QASHFC
Trigger: GCAAAAGTGTGAGGCTTGCCAAAGACCTGAACTTTG...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCGTGAGCTTCTCAAGGTaGCCAAGAAACATGTCTTAT +
Preference number: 2 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCVSFSR*PRNMSY
Trigger: ATAAGACATGTTTCTTGGCCACCTTGAGAAGCTCAC...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp CACGTGCAGAGGCTCTTACTTACACTTTCACACCCATTAACTCAGTaGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: HVQRLLLTLSHPLTQ*SHRRAHGGRLAGQY
Trigger: ATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTGAGTTAATGGGTGTGAAAGTGTAAGTAAGAGCCTCTGCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTGACTGCAAAGCAGGCTaGAACTGTAAGCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: VTSIFSCPCTSALLALRPDCKAG*NCKPSF
Trigger: AAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTC...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTTTGAAGGAGGAAGCTaGGGCAAGGAGATGGGTCTG +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASFEGGS*GKEMGL
Trigger: CAGACCCATCTCCTTGCCTCAGCTTCCTCCTTCAAA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCAAACCCCTGCCCCCTaGATGTTTCCAGTCTATGTG +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASQTPAP*MFPVYV
Trigger: CACATAGACTGGAAACATTCAGGGGGCAGGGGTTTG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCCACCCTCTCCATGGATaGCTCCCAGCTCCAACGCTA +
Preference number: 2 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAHPLHG*LPAPTL
Trigger: TAGCGTTGGAGCTGGGAGTCATCCATGGAGAGGGTG...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGGACAGAGGCCAAGGTaGCCTCAGCCAGCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKGQRPR*PQPAKR
Trigger: TCTCTTTGCTGGCTGAGGTCACCTTGGCCTCTGTCC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGAGCCCGGCTTCACCTaGTTGCTGTCTACTCCCATA +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSEPGFT*LLSTPI
Trigger: TATGGGAGTAGACAGCAAGCAGGTGAAGCCGGGCTC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTTGATGAAGTATACTTaGACCAGGCCCCAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMALMKYT*TRPQLL
Trigger: TAACAACTGGGGCCTGGTGCAAGTATACTTCATCAA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTTGATGAAGTATACTTaGACCAGGCCCCAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSLMKYT*TRPQLL
Trigger: TAACAACTGGGGCCTGGTGCAAGTATACTTCATCAA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTGCACTTAAAGTTCTATaGCTTTGGCAGTTTAGACAA +
Preference number: 2 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAALKVL*LWQFRQ
Trigger: TTGTCTAAACTGCCAAAGCCATAGAACTTTAAGTGC...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: VTSIFSCPCTSALLALRPEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGACAGGTTGGAGTACAGTaGCGCAATCTCCACTCACTG +
Preference number: 2 (lower is better)
Translates to: GGVSPARENTVARRMGFGQVGVQ*RNLHSL
Trigger: CAGTGAGTGGAGATTGCGCCACTGTACTCCAACCTG...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCCATCACCCTCTCCATaGATGACTCCCAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: SKFHALGIAEVTRAQATLPSPSP*MTPSSN
Trigger: GTTGGAGCTGGGAGTCATCCATGGAGAGGGTGATGG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCGCTAGAAGTTTAAATTaGGTCACATTCACACTGGCG +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSARSLN*VTFTLA
Trigger: CGCCAGTGTGAATGTGACCCAATTTAAACTTCTAGC...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTAGACATGTCTTTAATTaGTGCCAGTGTAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLRHVFN*CQCSSQ
Trigger: CTGGCTGCTACACTGGCACCAATTAAAGACATGTCT...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR CAA 90 bp GCCAGCTCTCCTACTGACATCCCACAGAAAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCT +
Preference number: 2 (lower is better)
Translates to: ASSPTDIPQKARLDL*WLGGVSPARENTVA
Trigger: AGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCATATGCCAGTCTCTGCTaGGACATTGCCCAAACCCAG +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSYASLC*DIAQTQ
Trigger: CTGGGTTTGGGCAATGTCTCAGCAGAGACTGGCATA...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCAGACTGAAAAATACGTaGGCAGCCAAAGAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELRLKNT*AAKEGA
Trigger: GGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCT...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR TCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVTGMIL*GRRLRT
Trigger: TGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGT...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR TCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTATTTCTCCTCAGGCCCTaGCTGCAAAGCAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVFLLRP*LQSRLK
Trigger: TTTCAGCCTGCTTTGCAGTCAGGGCCTGAGGAGAAA...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCCACATGGGACCTTGCTaGGACCCAATCCCAACGAGC +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCHMGPC*DPIPTS
Trigger: GCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTG...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTTGCTCTTGGAATTGCTaGGGTGACAAGGGCACAAGC +
Preference number: 2 (lower is better)
Translates to: SKFHALGIAEVTRAQATLCSWNC*GDKGTS
Trigger: GCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCA...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCGAGCTACCTTTTAGATaGCTGGATGTCCTGTATGGG +
Preference number: 2 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLELPFR*LDVLYG
Trigger: CCCATACAGGACATCCAGGCATCTAAAAGGTAGCTC...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTCGCCTCCCAGGTTCTTaGCATTCTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCAAGAACCTGGGAGGCG...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: GGVSPARENTVARRMGFGSSQRR*LTVRQH
Trigger: ATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCT...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp ACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCATTGACCACTGGACTATaGCCAAGTGAGTCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: TNIASGTLHSTMGLGPASLTTGL*PSESLE
Trigger: CTCCAAGGACTCACTTGGGCATAGTCCAGTGGTCAA...TGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCGGGCCAAATCTGTCCTaGCATCTGTTTTTCTATGGC +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIGPNLS*HLFFYG
Trigger: GCCATAGAAAAACAGATGGCAGGACAGATTTGGCCC...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAATGCAGTGTGTACCCTaGACGTTGCAGCCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKMQCVP*TLQPLP
Trigger: GGGAAGAGGCTGCAACGTGCAGGGTACACACTGCAT...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGGTGGCCCATGGCCATaGCTTGAGTTCAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHGGPWP*LEFSCS
Trigger: GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCCACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 2 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
3UTR-3UTR CCA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTG +
Preference number: 2 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVSPAMA*ASSFYL
Trigger: CAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACT...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAACACCATTGAACTCCTaGTTTTGGCTTGGCATGGTG +
Preference number: 2 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGTPLNS*FWLGMV
Trigger: CACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGT...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR CCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCGAGAAAGTTTGCAGATaGCCAGCTCTCCTACTGACA +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIEKVCR*PALLLT
Trigger: TGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTC...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCTTTAGTTTACTCTCCTaGCTCCACAGAGTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIFSLLS*LHRVPP
Trigger: TGGAGGGACTCTGTGGAGCCAGGAGAGTAAACTAAA...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTGCCCAACACAGAGCCTaGCCCACAGTTTCCATCACC +
Preference number: 2 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFAQHRA*PTVSIT
Trigger: GGTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGC...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACATGGGTTTGGCTTTGCTaGAGGAAGGGCCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTWVWLC*RKGQCG
Trigger: CCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCA...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGCTCCCTTGGGCCAATaGGATTTAGTAGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSAPLGQ*DLVELC
Trigger: GCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCCACTTGGACCTCATGTaGCTCCAAGACAAGACTTTA +
Preference number: 2 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLHLDLM*LQDKTL
Trigger: TAAAGTCTTGTCTTGGAGTCACATGAGGTCCAAGTG...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTGGTGGGCAGATTGGTTaGGCCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFGGQIG*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAACCAATCTGCCCACC...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCAGGAGTGGTGAAGACTaGAAAATACGTGAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSRSGED*KIREQP
Trigger: TGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCT...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAACAGAAAGCCAGGCTTaGTCTATTGTGGTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: GGVSPARENTVARRMGFGTESQA*SIVVRW
Trigger: CCACCTAACCACAATAGATCAAGCCTGGCTTTCTGT...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTACTCTTCCAACAGGGGTaGTACCCAAATGAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLLFQQG*YPNEWR
Trigger: CCTCCACTCATTTGGGTATCACCCCTGTTGGAAGAG...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACC +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPLWESC*DFRRMT
Trigger: GGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATCTCCTTTTGGGGAATaGATCACTCCATCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPSPFGE*ITPSSG
Trigger: GCCAGAGGATGGAGTGATTCATTCCCCAAAAGGAGA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAGGGTGGTGGAGGAAATaGTTATTGACTTCCACATCT +
Preference number: 2 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGGWWRK*LLTSTS
Trigger: AGATGTGGAAGTCAATAAGCATTTCCTCCACCACCC...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCACTTGTTACCTACCACTaGAGCTCCCTTGGGCCAATG +
Preference number: 2 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPLVTYH*SSLGPM
Trigger: CATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAG...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMSSQRR*LTVRQH
Trigger: ATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCGTGTACATCTGTGTTaGTTGAGTGTCCCAGTATGG +
Preference number: 2 (lower is better)
Translates to: GLLPTYDYITRACQPQCLRVHLC*LSVPVW
Trigger: CCATACTGGGACACTCAAGCAACACAGATGTACACG...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACATTATAGTTATTTATaGCCAGCTCTGTTTCTCCTA +
Preference number: 2 (lower is better)
Translates to: LECPASFFLTELSPAHPSHYSYL*PALFLL
Trigger: TAGGAGAAACAGAGCTGGGCATAAATAACTATAATG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCATGCTTTCTATGCACATaGCAGACCCTGTTGACTGGC +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSCFLCT*QTLLTG
Trigger: GCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCA...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp ACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCAATGAGCCATCGTGCCTaGCCCACAATTTCCACAAAT +
Preference number: 2 (lower is better)
Translates to: TNIASGTLHSTMGLGPASMSHRA*PTISTN
Trigger: ATTTGTGGAAATTGTGGGCCAGGCACGATGGCTCAT...TGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCGTGATTCACCACACCTaGCCAGTGTCATTTTCTACT +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIVIHHT*PVSFST
Trigger: AGTAGAAAATGACACTGGCCAGGTGTGGTGAATCAC...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCATTCCATAAATCCTaGCAGAGGCAGGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: GLLPTYDYITRACQPQCLPFHKS*QRQEEK
Trigger: CTTCTCTTCCTGCCTCTGCCAGGATTTATGGAATGG...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAATGTTTCCAGTCTATGTaGTATTACTTGGAACCCACT +
Preference number: 2 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQCFQSM*YYLEPT
Trigger: AGTGGGTTCCAAGTAATACCACATAGACTGGAAACA...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGGGTCACATTCACACTaGCGCCCAACACAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHGSHSH*RPTQSL
Trigger: CAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCAAGAAAGGAAGCCTATaGTTAACCCTTGATGAAGTA +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSKKGSL*LTLDEV
Trigger: TACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTT...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCAGGCGGATGACCAATTaGTTTTTATGTCCATTTGAA +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSRRMTN*FLCPFE
Trigger: TTCAAATGGACATAAAAACCAATTGGTCATCCGCCT...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGGTATGGCTGTGACCTaGCCTTCCCAGCTCAAGAAT +
Preference number: 2 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKGMAVT*PSQLKN
Trigger: ATTCTTGAGCTGGGAAGGCCAGGTCACAGCCATACC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACAGCCAGAGAACTTATaGGAAAGCAGGATGTTATGC +
Preference number: 2 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTQPENL*ESRMLC
Trigger: GCATAACATCCTGCTTTCCCATAAGTTCTCTGGCTG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR-3UTR TCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTTATAGAGAAGCAGATTaGACACAAAACCTATTTCCG +
Preference number: 2 (lower is better)
Translates to: VTSIFSCPCTSALLALRPYREAD*TQNLFP
Trigger: CGGAAATAGGTTTTGTGTTCAATCTGCTTCTCTATA...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTATTCCATGTGGACTTTaGATTAGAATGAGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASIPCGL*IRMSVG
Trigger: CCCCACGCTCATTCTAATTCAAAGTCCACATGGAAT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAAAGGTGGGCTCTTATTaGGTCACATGGGACCTTGCT +
Preference number: 2 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLKVGSY*VTWDLA
Trigger: AGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCTTTATAGAAGTCTGTTaGCCACTGGACTATGCCCAA +
Preference number: 2 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIFIEVC*PLDYAQ
Trigger: TTGGGCATAGTCCAGTGGTCAACAGACTTCTATAAA...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCTTAAGAAGCCAGAACTaGAACCCAAGCCTCACTCAT +
Preference number: 2 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSLRSQN*NPSLTH
Trigger: ATGAGTGAGGCTTGGGTTTCAGTTCTGGCTTCTTAA...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAACTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACC +
Preference number: 2 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKLWESC*DFRRMT
Trigger: GGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAG...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTAAGAGTTGGGGTGCAGTaGTTTTTCTTTGATTCATGC +
Preference number: 2 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVRVGVQ*FFFDSC
Trigger: GCATGAATCAAAGAAAAATCACTGCACCCCAACTCT...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTCTCCATCACCGCAGCTaGGGAACTACTGTATGTGGA +
Preference number: 2 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFLHHRS*GTTVCG
Trigger: TCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAG...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR-3UTR GCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGAGCTACCTTTTAGATaGCTGGATGTCCTGTATGGG +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSELPFR*LDVLYG
Trigger: CCCATACAGGACATCCAGGCATCTAAAAGGTAGCTC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGGAGCCCGGCTTCACCTaGTTGCTGTCTACTCCCATA +
Preference number: 2 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELEPGFT*LLSTPI
Trigger: TATGGGAGTAGACAGCAAGCAGGTGAAGCCGGGCTC...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR GCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTTGTGGACTTAACACCTaGCATCCTGCCCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: SSRSFIIILALPPTKCAICGLNT*HPAPGK
Trigger: CTTGCCTGGGGCAGGATGGCAGGTGTTAAGTCCACA...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR GCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTTACTAAAAACAGGCTaGTGTGTGGGAATCCGCACA +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASLLKTG*CVGIRT
Trigger: TGTGCGGATTCCCACACAGCAGCCTGTTTTTAGTAA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTTTTTCTTTGATTCATaGTCACTCCCAATACCTTAC +
Preference number: 2 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSFFFDS*SLPIPY
Trigger: GTAAGGTATTGGGAGTGAGCATGAATCAAAGAAAAA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGACCTGGATGTCCTGTATaGGATTTTATAGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGPGCPV*DFIEKQ
Trigger: CTGCTTCTCTATAAAATCCCATACAGGACATCCAGG...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTG +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSGDASG*WRKCLL
Trigger: CAATAAGCATTTCCTCCACCACCCAGAAGCATCTCC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCAGCCTCTCGGGTAGCTaGGATTACAGACACACACCA +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCSLSGS*DYRHTP
Trigger: TGGTGTGTGTCTGTAATCCCAGCTACCCGAGAGGCT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCGACATAGTTAACACTTaGGGCCAGTACAGCCAGTTC +
Preference number: 2 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPDIVNT*GQYSQF
Trigger: GAACTGGCTGTACTGGCCCCAAGTGTTAACTATGTC...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTACCTGAGTTTCAGAGTTaGGGTGCAGTGATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVPEFQS*GAVIFL
Trigger: AAGAAAAATCACTGCACCCCAACTCTGAAACTCAGG...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGCTTCCTCCTTCTACCTaGTGTGCAGGATGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRLPPST*CAGCLV
Trigger: TACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAG...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAAATCAGTGTTAGGATaGTCTGCCCCAGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFKSVLG*SAPEGM
Trigger: CATGCCTTCTGGGGCAGATCATCCTAACACTGATTT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTCAATGAGGACTCAGTaGGGATCAGAATTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASSMRTQ*GSEFRR
Trigger: TCTTCTGAATTCTGATCCTCACTGAGTCCTCATTGA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCTTAGAGGGTACAAATaGACTGCCCAAAGTCACATA +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASLRGYK*TAQSHI
Trigger: TATGTGACTTTGGGCAGTTCATTTGTACCCTCTAAG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATTCCAATGTTACAGCTaGGGAAACCAAGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPFQCYS*GNQGSE
Trigger: TTCTGAGCCTTGGTTTCCTCAGCTGTAACATTGGAA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTAGGCTTTGTGCAAGATaGACAGGGCAAGAGGCGCCC +
Preference number: 2 (lower is better)
Translates to: GSEMRCNITVMRLRSFATRLCAR*TGQEAP
Trigger: GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTACGATCATGGCTCACTaGAGCCTGGACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEITIMAH*SLDLLG
Trigger: GCCCAGGAGGTCCAGGCTGCAGTGAGCCATGATCGT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGACAGAGCTAAGCCCTaGCCATCCTTCAGTACCACT +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHDRAKP*PSFSTT
Trigger: AGTGGTACTGAAGGATGGGCAGGGCTTAGCTCTGTC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAAGTTCCTTGCCATCGTaGTCCAGGGTTGGTGTCATT +
Preference number: 2 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTSSLPS*SRVGVI
Trigger: AATGACACCAACCCTGGAGCACGATGGCAAGGAACT...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGGCAGACCCTGTTGACTaGCTACCCAAAAGCCATTTG +
Preference number: 2 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRADPVD*LPKSHL
Trigger: CAAATGGCTTTTGGGTAGCCAGTCAACAGGGTCTGC...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTCTGACCATTCCAAAGTaGCTGCACTCAGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFLTIPK*LHSGGG
Trigger: ACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAG...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCTTCCTCTCTTCTCACTaGCATGATCCTCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCFLSSH*HDPLRQ
Trigger: CTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAA...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTCAGAATTCAGAAGATaGCAGAACCCTCCACATGTT +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASSEFRR*QNPPHV
Trigger: AACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGCCCAAGTGAGTCCTTaGAGGGGACCCACTGGAGCT +
Preference number: 2 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWAQVSP*RGPTGA
Trigger: AGCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGC...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTTTCCCAGGCTGGCTGTaGAAACTGAGCCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSFPGWL*KLSLLQ
Trigger: CTGGAGGAGGCTCAGTTTCCACAGCCAGCCTGGGAA...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATGGCTGGGCAGTATATaGCCTATTCCAATGTTACAG +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPWLGSI*PIPMLQ
Trigger: CTGTAACATTGGAATAGGCCATATACTGCCCAGCCA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp AGTATTCTCAGTATAGAATACCCAAAATTCCCGTGTACATCTGTGTaGCTTGAGTGTCCCAGTATGGGAGGAGGTAGACTTGGCACATCG +
Preference number: 2 (lower is better)
Translates to: SILSIEYPKFPCTSV*LECPSMGGGRLGTS
Trigger: CGATGTGCCAAGTCTACCTCCTCCCATACTGGGACACTCAAGCAACACAGATGTACACGGGAATTTTGGGTATTCTATACTGAGAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 90 bp CATGAAGCCCATCAGCCCTTGGAGATCTTGTTCATAACCTCCACATaGTCAATGCCCAGCAGTGTCCTAAAAACAGCAAGTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: HEAHQPLEILFITST*SMPSSVLKTASSQN
Trigger: GTTTTGAGAACTTGCTGTTTTTAGGACACTGCTGGGCATTGACAATGTGGAGGTTATGAACAAGATCTCCAAGGGCTGATGGGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 90 bp TTCAAGAACCATCTCATCCATGAAGCCCATCAGCCCTTGGAGATCTaGTTCATAACCTCCACATTGTCAATGCCCAGCAGTGTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: FKNHLIHEAHQPLEI*FITSTLSMPSSVLK
Trigger: TTTTAGGACACTGCTGGGCATTGACAATGTGGAGGTTATGAACAAGATCTCCAAGGGCTGATGGGCTTCATGGATGAGATGGTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGGGCAGGAGGATCACTTaGGCCATGGAGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLGRRIT*AMELEA
Trigger: AGCCTCCAACTCCATGGCTCAAGTGATCCTCCTGCC...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGAGCACTTTGGGAGGCTaGAGGGGGAGGATCACTGGA +
Preference number: 2 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLSTLGG*RGRITG
Trigger: TCCAGTGATCCTCCCCCTTCAGCCTCCCAAAGTGCT...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCAGACTGAAAAATACGTaGGCAGCCAAAGAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCRLKNT*AAKEGA
Trigger: GGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCACAGAAAGCCAGGCTTaGTCTATTGTGGTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCTESQA*SIVVRW
Trigger: CCACCTAACCACAATAGATCAAGCCTGGCTTTCTGT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCCATACCTCAGGCCCTaGCTGCAAAGCAGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSPYLRP*LQSRLK
Trigger: TTTCAGCCTGCTTTGCAGTCAGGGCCTGAGGTATGG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAGTAACTGTGATGAATaGGTGTTGTGCCTCTACTAT +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASSNCDE*VLCLYY
Trigger: ATAGTAGAGGCACAACACTCATTCATCACAGTTACT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCCAAGAGCCTGGGGTGTaGCGGACACATAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSQEPGV*RTHSWM
Trigger: CATCCAGCTATGTGTCCGTCACACCCCAGGCTCTTG...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGGACTCCAGCTGACATaGTGCAGTGTGTACCCTGCA +
Preference number: 2 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSGLQLT*CSVYPA
Trigger: TGCAGGGTACACACTGCATCATGTCAGCTGGAGTCC...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAGAAAAATGTAGCCTGTaGCCCATGCCAAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTEKCSL*PMPRGL
Trigger: TAAGCCTCTTGGCATGGGTCACAGGCTACATTTTTC...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCCTTCTACCTGATGTaGAGGATGCTTGGTATTCCC +
Preference number: 2 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRSFYLM*RMLGIP
Trigger: GGGAATACCAAGCATCCTGCACATCAGGTAGAAGGA...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGCTCCCAACCCCTGCCTaGCTTGAACTTGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLLPTPA*LELGGE
Trigger: CTCACCTCCAAGTTCAAGGCAGGCAGGGGTTGGGAG...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGATTTAGTAGAACTCTaGTGGGAGTTACTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPDLVEL*WELLGE
Trigger: CTCTCCCAGTAACTCCCAGCAGAGTTCTACTAAATC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAGGTGTTGTGCTGTGTaGCTCGTATACACAGAAGAA +
Preference number: 2 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFRCCAV*LVYTEE
Trigger: TTCTTCTGTGTATACGAGGCACACAGCACAACACCT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR GCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAAGTTCCTTGCCATCGTaGTCCAGGGTTGGTGTCATT +
Preference number: 2 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRSSLPS*SRVGVI
Trigger: AATGACACCAACCCTGGAGCACGATGGCAAGGAACT...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR CCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCACCTGGATGTCCTGTATaGGATTTTATAGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: RSSLDNSTDLISFPILSSPGCPV*DFIEKQ
Trigger: CTGCTTCTCTATAAAATCCCATACAGGACATCCAGG...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCATTAGTAGAACTCTGCTaGGAGTTACTGGGAGAGCTT +
Preference number: 2 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPLVELC*ELLGEL
Trigger: AAGCTCTCCCAGTAACTCCCAGCAGAGTTCTACTAA...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTGTAATTCTAGCACTTTaGGAGGCTGAAGGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFVILAL*EAEGGG
Trigger: TCCTCCCCCTTCAGCCTCCCAAAGTGCTAGAATTAC...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAAAAGCATGCTTCCCTaGGCACAGAGATACAGATTC +
Preference number: 2 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFKSMLP*AQRYRF
Trigger: GAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCGCTAGAAGTTTAAATTaGGTCACATTCACACTGGCG +
Preference number: 2 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPARSLN*VTFTLA
Trigger: CGCCAGTGTGAATGTGACCCAATTTAAACTTCTAGC...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTTGAACCTCCTCTCATaGCTTCATCGTTACTCTGTG +
Preference number: 2 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRLNLLS*LHRYSV
Trigger: CACAGAGTAACGATGAAGTCATGAGAGGAGGTTCAA...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGAGGAGTGGTGAAGACTaGAAAATACGTGAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELRSGED*KIREQP
Trigger: TGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCT...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGCACATGGGACCTTGCTaGGACCCAATCCCAACGAGC +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWHMGPC*DPIPTS
Trigger: GCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTG...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATTTATAGAAGTCTGTTaGCCACTGGACTATGCCCAA +
Preference number: 2 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLFIEVC*PLDYAQ
Trigger: TTGGGCATAGTCCAGTGGTCAACAGACTTCTATAAA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAAGACTTCATTGTCCTaGAATGGAATGTCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASKTSLS*NGMSRN
Trigger: GTTTCTAGACATTCCATTTCAGGACAATGAAGTCTT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACAGCAACATTTATGCCTaGGTTTCAGAGTTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHSNIYA*VSELGC
Trigger: GCACCCCAACTCTGAAACTCAGGCATAAATGTTGCT...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAGAAAAATGTAGCCTGTaGCCCATGCCAAGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: GTNNELSHRVRSSGAMLREKCSL*PMPRGL
Trigger: TAAGCCTCTTGGCATGGGTCACAGGCTACATTTTTC...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR GCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGCCGGGTGTAGCAGCATaGACCTGTAATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWPGVAA*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATGCTGCTACACCCGG...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTGATGTGCAGGATGCTTaGTATTCCCCTTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: GSEMRCNITVMRLRSFATDVQDA*YSPSLP
Trigger: GGGCAGTGAAGGGGAATACCAAGCATCCTGCACATC...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTTCATCAAGCCCACTTaGACCTCATGTGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFFIKPT*TSCDSK
Trigger: CTTGGAGTCACATGAGGTCCAAGTGGGCTTGATGAA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTGTGGCTGCACTCAGGTaGAGGTATGACTCTAGCACA +
Preference number: 2 (lower is better)
Translates to: GSEMRCNITVMRLRSFATVAALR*RYDSST
Trigger: TGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTCATTCTATTATTGTTaGTTGCAGCTTGGCATCAGT +
Preference number: 2 (lower is better)
Translates to: VLFPSVPALLPTQDHIASSFYYC*LQLGIS
Trigger: ACTGATGCCAAGCTGCAACCAACAATAATAGAATGA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCACAAATTCCCAGAAGTaGAATTGGAGGATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLTNSQK*NWRIRG
Trigger: TCCTCTGATCCTCCAATTCCACTTCTGGGAATTTGT...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CCA 90 bp ACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCACAATTTAACAACAAGTaGCATAGAGTTGGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: TNIASGTLHSTMGLGPASQFNNK*HRVGGL
Trigger: TAAGCCTCCAACTCTATGCCACTTGTTGTTAAATTG...TGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAAAGGGCAAGGAGAAATaGAAACAGATGACATGTGAG +
Preference number: 2 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKKGKEK*KQMTCE
Trigger: CTCACATGTCATCTGTTTCCATTTCTCCTTGCCCTT...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp AATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTaGCAAAGAGTCCCAGAGGAGTTCTGGGCAGTAGTGGCATCATCA +
Preference number: 2 (lower is better)
Translates to: NEVQYYSNEIEVFCN*QRVPEEFWAVVASS
Trigger: TGATGATGCCACTACTGCCCAGAACTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 90 bp CAAGGTGCAGGCCAGGGCAAAACGTGCATCAGCAATAAAATAGATTaGGTGGGTGGACACATTAGGAGTACTCATATAAGAACTTTCCTA +
Preference number: 2 (lower is better)
Translates to: QGAGQGKTCISNKID*VGGHIRSTHIRTFL
Trigger: TAGGAAAGTTCTTATATGAGTACTCCTAATGTGTCCACCCACCAAATCTATTTTATTGCTGATGCACGTTTTGCCCTGGCCTGCACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGCTTCCTCCTTCTACCTaGTGTGCAGGATGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKLPPST*CAGCLV
Trigger: TACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAG...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTAACTTATTTCAGAACTaGGCTCCAGGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GSEMRCNITVMRLRSFATNLFQN*APGQVQ
Trigger: CTGCACCTGGCCTGGAGCTCAGTTCTGAAATAAGTT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGAGGAGTGGTGAAGACTaGAAAATACGTGAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: LQKLLVGVQMENQISNWLRSGED*KIREQP
Trigger: TGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCT...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTGAACCATCTCATCCATaGAGCCCATCAGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIEPSHP*SPSALG
Trigger: TCCAAGGGCTGATGGGCTTCATGGATGAGATGGTTC...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCCAAGGCTCAGAAAAATaGAGTGATTTGCAAGATTAC +
Preference number: 2 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPQGSEK*SDLQDY
Trigger: GTAATCTTGCAAATCACTTCATTTTTCTGAGCCTTG...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAGGCTCCCAAAACACTTaGTTTGTATCTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTGSQNT*FVSFLW
Trigger: CCATAGGAAAGATACAAATCAAGTGTTTTGGGAGCC...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTAAAAGCCTGAGAGTATaGCAGTCTCTGCTGAGACAT +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFKSLRV*QSLLRH
Trigger: ATGTCTCAGCAGAGACTGGCATACTCTCAGGCTTTT...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTTCTATTATTGTTGGTTaGAGCTTGGCATCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: GLLPTYDYITRACQPQCLSIIVG*SLASVL
Trigger: TAAAACTGATGCCAAGCTGCAACCAACAATAATAGA...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGATCTCAGCACCAGTTaGAAGGTGCAAATACACATA +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCDLSTS*KVQIHI
Trigger: TATGTGTATTTGCACCTTGCAACTGGTGCTGAGATC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGCAATCTCCACTCACTaGAACCTCTGCCTTCCGGGT +
Preference number: 2 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIAISTH*NLCLPG
Trigger: ACCCGGAAGGCAGAGGTTGCAGTGAGTGGAGATTGC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGATTCTTCCTCTTTCTATaGATGGGCTCTCTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRFFLFL*MGSLGK
Trigger: CTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAA...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR GCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACTTTCCTATGGCAATTaGATTTGTCTGCAGTACATT +
Preference number: 2 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPLSYGN*ICLQYI
Trigger: AATGTACTGCAGACAAATGCAATTGCCATAGGAAAG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTGCTTTCTATGCACATaGCAGACCCTGTTGACTGGC +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKCFLCT*QTLLTG
Trigger: GCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGTTAGACGCTCAGCTGTaGCATAAAACATTCCATGTG +
Preference number: 2 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMLDAQL*HKTFHV
Trigger: CACATGGAATGTTTTATGCCACAGCTGAGCGTCTAA...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGATTGTCGGGGTCCAAATaGAAAATCAGATATCAAATT +
Preference number: 2 (lower is better)
Translates to: GGVSPARENTVARRMGFGLSGSK*KIRYQI
Trigger: AATTTGATATCTGATTTTCCATTTGGACCCCGACAA...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCAGGCGGATGACCAATTaGTTTTTATGTCCATTTGAA +
Preference number: 2 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPRRMTN*FLCPFE
Trigger: TTCAAATGGACATAAAAACCAATTGGTCATCCGCCT...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp GACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGAAATCCAAACTaGTTGAGCAAAAGAAATCAAGAACAAGCAAATACCAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: DSHNKLRSGQRRNPN*LSKRNQEQANTRRE
Trigger: TTCCCTTCTGGTATTTGCTTGTTCTTGATTTCTTTTGCTCAACAAGTTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR CAA 90 bp GGTAGGTGCTCAATCAATGTATGGAATGACATTAATTTACAACGGTaGAGTTCTTCCTCTTTCTATGCATGGGCTCTCTGGGAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: GRCSINVWNDINLQR*SSSSFYAWALWESC
Trigger: ACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAACTCAACCGTTGTAAATTAATGTCATTCCATACATTGATTGAGCACCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCGCCAAACGGAGTCATTaGCCGATGGTGTTAAGCTTG +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSAKRSH*PMVLSL
Trigger: CAAGCTTAACACCATCGGTCAATGACTCCGTTTGGC...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGGACTTTGAATTAGAATaGGCGTGGGGGCGGGGACAA +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWDFELE*AWGRGQ
Trigger: TTGTCCCCGCCCCCACGCTCATTCTAATTCAAAGTC...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCACCAAAAGCAGCTACTaGAGATGTGACCCAGGACCA +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSTKSSY*RCDPGP
Trigger: TGGTCCTGGGTCACATCTTCAGTAGCTGCTTTTGGT...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAAGAGTTGGGGTGCAGTaGTTTTTCTTTGATTCATGC +
Preference number: 2 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRRVGVQ*FFFDSC
Trigger: GCATGAATCAAAGAAAAATCACTGCACCCCAACTCT...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR GCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAATTAGTAAAGGAGGATaGTACTTCCAAGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPISKGG*YFQGLF
Trigger: AAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTCTAACTGTGCCTTTTaGCAGCTGTGTGTTAGGTCC +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKSNCAF*QLCVRS
Trigger: GGACCTAACACACAGCTGGCAAAAGGCACAGTTAGA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: QEQANTRREQPKVFQSYGSSQRR*LTVRQH
Trigger: ATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCT...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGACATCCATCTTCTCCTaGCCTTGTACATCAGCACTC +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKTSIFS*PCTSAL
Trigger: GAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGT...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
3UTR-3UTR CCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTG +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKGDASG*WRKCLL
Trigger: CAATAAGCATTTCCTCCACCACCCAGAAGCATCTCC...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGCAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAA +
Preference number: 2 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELQQAKV*AEKKSK
Trigger: TTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTG...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR CCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTCCTCTCTTCTCACTaGCATGATCCTCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSFLSSH*HDPLRQ
Trigger: CTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATTCAAATGCTACCCATaGTCAAATCATTTTTGGGAC +
Preference number: 2 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLFKCYP*SNHFWD
Trigger: GTCCCAAAAATGATTTGACCATGGGTAGCATTTGAA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCTACTTGATTCATAAGTaGTCTTTTACCGACCTACGA +
Preference number: 2 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLYLIHK*SFTDLR
Trigger: TCGTAGGTCGGTAAAAGACCACTTATGAATCAAGTA...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGAAACAGGCTGCTGTGTaGGAATCCGCACATAGGCAG +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWKQAAV*ESAHRQ
Trigger: CTGCCTATGTGCGGATTCCCACACAGCAGCCTGTTT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGAAACTGTTAAGGAGCTaGAGGTCTATAAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMKLLRS*RSISCC
Trigger: ACAACAGCTTATAGACCTCCAGCTCCTTAACAGTTT...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 90 bp AGGAAACAGGAGGAATCTTTTTCAGAATATTTGCTCCAGCAAAAATaGTCCATCAAGGCTAACAATGGAGAGAAGGCAGAGATACTGAGC +
Preference number: 2 (lower is better)
Translates to: RKQEESFSEYLLQQK*SIKANNGEKAEILS
Trigger: GCTCAGTATCTCTGCCTTCTCTCCATTGTTAGCCTTGATGGACAATTTTTGCTGGAGCAAATATTCTGAAAAAGATTCCTCCTGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 90 bp ACAGAAGAAATTATTCTCTATTGGGCACGTACTCCATGCCAGGTGTaGTGCTGTGTGCCTCGTATACACAGAAGAAATTATTCTCTATTG +
Preference number: 2 (lower is better)
Translates to: TEEIILYWARTPCQV*CCVPRIHRRNYSLL
Trigger: CAATAGAGAATAATTTCTTCTGTGTATACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCCCAATAGAGAATAATTTCTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGCTCCCTTGGGCCAATaGGATTTAGTAGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIAPLGQ*DLVELC
Trigger: GCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTTGAAATTCGTGAGATaGGAAGCTGCAGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: KPICIFTKSSILFIMSHKLKFVR*EAAAGF
Trigger: AAACCCAGCTGCAGCTTCTCATCTCACGAATTTCAA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAGACTGAAAAATACGTaGGCAGCCAAAGAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIRLKNT*AAKEGA
Trigger: GGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGGGTGATACCCAAATaGGTGGAGGTCCAAAGCATA +
Preference number: 2 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLGVIPK*VEVQSI
Trigger: TATGCTTTGGACCTCCACTCATTTGGGTATCACCCC...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAGAGATTTTAGGCGGATaGCCAATTGGTTTTTATGTC +
Preference number: 2 (lower is better)
Translates to: GTNNELSHRVRSSGAMLREILGG*PIGFYV
Trigger: GACATAAAAACCAATTGGTCATCCGCCTAAAATCTC...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR GCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGGAGCAGCACCAGAGTaGTTCCAAATTGGTTTTGAT +
Preference number: 2 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSGAAPE*FQIGFD
Trigger: ATCAAAACCAATTTGGAAGCACTCTGGTGCTGCTCC...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR-3UTR CCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGCACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 2 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCATTCTTATTTATAAAATaGAGATGGCTGGTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPFLFIK*RWLVQR
Trigger: CCTTTGGACCAGCCATCTCCATTTTATAAATAAGAA...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTTTCTTATTTATAAAATaGAGATGGCTGGTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCFLFIK*RWLVQR
Trigger: CCTTTGGACCAGCCATCTCCATTTTATAAATAAGAA...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTACCTTTTAGATGCCTaGATGTCCTGTATGGGATTT +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFYLLDA*MSCMGF
Trigger: AAATCCCATACAGGACATCCAGGCATCTAAAAGGTA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGCTTGGAGATGCTTCTaGGTGGTGGAGGAAATGCTT +
Preference number: 2 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIAWRCF*VVEEML
Trigger: AAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGTCAGAATTCAGAAGATaGCAGAACCCTCCACATGTT +
Preference number: 2 (lower is better)
Translates to: LQKLLVGVQMENQISNWLSEFRR*QNPPHV
Trigger: AACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGA...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTGCAAAAGAGACCATATaGCCCATAAAGACTCCTTTA +
Preference number: 2 (lower is better)
Translates to: SSRSFIIILALPPTKCAIAKETI*PIKTPL
Trigger: TAAAGGAGTCTTTATGGGCCATATGGTCTCTTTTGC...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCCCAATTTTCTACTGTTaGACTTTAAGATTGTCAAGC +
Preference number: 2 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLPIFYC*TLRLSS
Trigger: GCTTGACAATCTTAAAGTCCAACAGTAGAAAATTGG...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 90 bp CCGGATATTAATACTGGGAAAGGGGTGATTCAACTAGGACAGTATTaGCAAGGATCTGATAAGGGAGACACTGTAGAACATAAATACATG +
Preference number: 2 (lower is better)
Translates to: PDINTGKGVIQLGQY*QGSDKGDTVEHKYM
Trigger: CATGTATTTATGTTCTACAGTGTCTCCCTTATCAGATCCTTGCAAATACTGTCCTAGTTGAATCACCCCTTTCCCAGTATTAATATCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 90 bp AGACTAATAGGAAGTACAAAGGCACAAAAGTATGGGAGCATCATTTaGGGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: RLIGSTKAQKYGSII*GTNNELSHRVRSSG
Trigger: TCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCCCAAAATGATGCTCCCATACTTTTGTGCCTTTGTACTTCCTATTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR-3UTR TCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTATAGAGAAGCAGATTaGACACAAAACCTATTTCCG +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFYREAD*TQNLFP
Trigger: CGGAAATAGGTTTTGTGTTCAATCTGCTTCTCTATA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGTTGAACCTCCTCTCATaGCTTCATCGTTACTCTGTG +
Preference number: 2 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLLNLLS*LHRYSV
Trigger: CACAGAGTAACGATGAAGTCATGAGAGGAGGTTCAA...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAAAATCAGTGTTAGGATaGTCTGCCCCAGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIKSVLG*SAPEGM
Trigger: CATGCCTTCTGGGGCAGATCATCCTAACACTGATTT...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCGACTGGCCAATTCTGTaGAATGCTATTACCAAACCC +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSDWPIL*NAITKP
Trigger: GGGTTTGGTAATAGCATTTCACAGAATTGGCCAGTC...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGCTATTACCAAACCCCTaGCCCCTGAATGTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWLLPNP*PLNVSS
Trigger: ACTGGAAACATTCAGGGGGCAGGGGTTTGGTAATAG...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTGCACTTAAAGTTCTATaGCTTTGGCAGTTTAGACAA +
Preference number: 2 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFALKVL*LWQFRQ
Trigger: TTGTCTAAACTGCCAAAGCCATAGAACTTTAAGTGC...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAAAAGCATGCTTCCCTaGGCACAGAGATACAGATTC +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIKSMLP*AQRYRF
Trigger: GAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGATGAGCCATCGTGCCTaGCCCACAATTTCCACAAAT +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWMSHRA*PTISTN
Trigger: ATTTGTGGAAATTGTGGGCCAGGCACGATGGCTCAT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCTGGTCAAATCATTTTTaGGACTACCTTCAGTTCATT +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCWSNHF*DYLQFI
Trigger: AATGAACTGAAGGTAGTCCCAAAAATGATTTGACCA...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGTGAATGGTTTGCTCTaGATAAGTCCTTTTCATTAT +
Preference number: 2 (lower is better)
Translates to: VATVIPISRYAVNNGLVCVNGLL*ISPFHY
Trigger: ATAATGAAAAGGACTTATCCAGAGCAAACCATTCAC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACAAGAAAGGAAGCCTATaGTTAACCCTTGATGAAGTA +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHKKGSL*LTLDEV
Trigger: TACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTT...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 90 bp TCAAGAAAATCACTCAACCTCCCTGGGCCAATTCCCTCATCGAGTTaGGGTTGTAATTCTGAATTTTCACTTATTAGGTTCTTAATGCAA +
Preference number: 2 (lower is better)
Translates to: SRKSLNLPGPIPSSS*GCNSEFSLIRFLMQ
Trigger: TTGCATTAAGAACCTAATAAGTGAAAATTCAGAATTACAACCCAAACTCGATGAGGGAATTGGCCCAGGGAGGTTGAGTGATTTTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 90 bp TCTACCCTTGGGTTTAGAAATTCTGAGCAGCCAAATGTGAATGGTTaGCTCTGGATAAGTCCTTTTCATTATAGCCAATTGGAACCATTT +
Preference number: 2 (lower is better)
Translates to: STLGFRNSEQPNVNG*LWISPFHYSQLEPF
Trigger: AAATGGTTCCAATTGGCTATAATGAAAAGGACTTATCCAGAGCAAACCATTCACATTTGGCTGCTCAGAATTTCTAAACCCAAGGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGACTGCAAAGCAGGCTaGAACTGTAAGCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLDCKAG*NCKPSF
Trigger: AAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTC...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGACAAAGATCAACCTaGAAGCCAAACGGAGTCATT +
Preference number: 2 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLGQRST*KPNGVI
Trigger: AATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCC...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCAGCATAGGACTAGAATaGAACAAACCCAGCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSSIGLE*NKPSSS
Trigger: AGAAGAGCTGGGTTTGTTTCATTCTAGTCCTATGCT...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGAGCCACGTGCCACCATaGCAGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWSHVPP*QANFCI
Trigger: AATACAAAAATTAGCCTGGCATGGTGGCACGTGGCT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTAACAATGGGTTAGTGTaGACACACGGAACAGAAAAT +
Preference number: 2 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSNNGLV*THGTEN
Trigger: ATTTTCTGTTCCGTGTGTGCACACTAACCCATTGTT...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR GCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACTTTTTCTTTGATTCATaGTCACTCCCAATACCTTAC +
Preference number: 2 (lower is better)
Translates to: GELLFIEHSPFGISLNSHFFFDS*SLPIPY
Trigger: GTAAGGTATTGGGAGTGAGCATGAATCAAAGAAAAA...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CCA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTAGACGCTCAGCTGTaGCATAAAACATTCCATGTG +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSLDAQL*HKTFHV
Trigger: CACATGGAATGTTTTATGCCACAGCTGAGCGTCTAA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 90 bp AATGTGAATGGTTTGCTCTGGATAAGTCCTTTTCATTATAGCCAATaGGAACCATTTGAATTCACACTCCTAATTACCTGCTTCTGGTTG +
Preference number: 2 (lower is better)
Translates to: NVNGLLWISPFHYSQ*EPFEFTLLITCFWL
Trigger: CAACCAGAAGCAGGTAATTAGGAGTGTGAATTCAAATGGTTCCAATTGGCTATAATGAAAAGGACTTATCCAGAGCAAACCATTCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAATAGCTAATGCTTATTaGGTACCGACTCCATGCCAA +
Preference number: 2 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIIANAY*VPTPCQ
Trigger: TTGGCATGGAGTCGGTACTCAATAAGCATTAGCTAT...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGTCAATGAGGACTCAGTaGGGATCAGAATTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWSMRTQ*GSEFRR
Trigger: TCTTCTGAATTCTGATCCTCACTGAGTCCTCATTGA...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTCTGAAGAAGTTTCATaGCTCTTGCTACTAGAGGTA +
Preference number: 2 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSSEEVS*LLLLEV
Trigger: TACCTCTAGTAGCAAGAGTCATGAAACTTCTTCAGA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR TCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTCAAGGCTCAGAAAAATaGAGTGATTTGCAAGATTAC +
Preference number: 2 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFQGSEK*SDLQDY
Trigger: GTAATCTTGCAAATCACTTCATTTTTCTGAGCCTTG...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATACCCAAAAGCCATTTaGTCCTTGTTACCTACCACT +
Preference number: 2 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIYPKAI*SLLPTT
Trigger: AGTGGTAGGTAACAAGGAGCAAATGGCTTTTGGGTA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTAAAGTTCTATGGCTTTaGCAGTTTAGACAACCTTTC +
Preference number: 2 (lower is better)
Translates to: GSEMRCNITVMRLRSFATKVLWL*QFRQPF
Trigger: GAAAGGTTGTCTAAACTGCCAAAGCCATAGAACTTT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATACAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAA +
Preference number: 2 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIQQAKV*AEKKSK
Trigger: TTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTG...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIRLDLL*LGGVSP
Trigger: AGGAGAAACTCCACCTAACCACAATAGATCAAGCCT...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTAATTACCTGCTTCTaGTTGCTGTGTCTAAACCAT +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEILITCF*LLCLNH
Trigger: ATGGTTTAGACACAGCAACCAGAAGCAGGTAATTAG...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGCCCAAATTGTTCATCTaGTGCAACACCATTATCTTC +
Preference number: 2 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLPKLFI*CNTIIF
Trigger: GAAGATAATGGTGTTGCAGCAGATGAACAATTTGGG...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGCAAAAGAGACCATATaGCCCATAAAGACTCCTTTA +
Preference number: 2 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIAKETI*PIKTPL
Trigger: TAAAGGAGTCTTTATGGGCCATATGGTCTCTTTTGC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 90 bp CTGGTTCTAGATGCCAACAAAATCACATTTGCAAACCTTAAGAGTTaGGTAAGTTACAACATTAAGATGACTAACGATATGTGTGCAGTA +
Preference number: 2 (lower is better)
Translates to: LVLDANKITFANLKS*VSYNIKMTNDMCAV
Trigger: TACTGCACACATATCGTTAGTCATCTTAATGTTGTAACTTACCAAACTCTTAAGGTTTGCAAATGTGATTTTGTTGGCATCTAGAACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAAAAGTTCTATGGCTTTaGCAGTTTAGACAACCTTTC +
Preference number: 2 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIKVLWL*QFRQPF
Trigger: GAAAGGTTGTCTAAACTGCCAAAGCCATAGAACTTT...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTGGTCAAATCATTTTTaGGACTACCTTCAGTTCATT +
Preference number: 2 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIWSNHF*DYLQFI
Trigger: AATGAACTGAAGGTAGTCCCAAAAATGATTTGACCA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp CTGAGTCTGAACTGTCCGCACCTCCCAACCCCTGCCTaGCTTGAACTTGGAGGTGAGGGCAGGGTGTCACAG +
Preference number: 3 (lower is better)
Translates to: LSLNCPHLPTPA*LELGGEGRVSQ
Trigger: CTGTGACACCCTGCCCTCACCTCCAAGTTCAAGGCAGGCAGGGGTTGGGAGGTGCGGACAGTTCAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCACTCAGTCACCCCCATaGATCCCCTGCACCTTTGCA +
Preference number: 3 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPTQSPP*IPCTFA
Trigger: TGCAAAGGTGCAGGGGATCAATGGGGGTGACTGAGT...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATGTGTACCCTGCACGTaGCAGCCTCTTCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LECPASFFLTELSPAHPSCVPCT*QPLPRL
Trigger: CAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp ATTGGTGGCCAACCCCTGATTCCTAAGGGTGCCTACTaGGTCATCTGGGCCAGATCAGCCCCTAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: IGGQPLIPKGAY*VIWARSAPRPS
Trigger: GCTGGGCCTAGGGGCTGATCTGGCCCAGATGACTCAGTAGGCACCCTTAGGAATCAGGGGTTGGCCACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACT +
Preference number: 3 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSVSAET*PKPSRT
Trigger: AGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGAC...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGGCTTGGGTTTGGCTTaGCTGGAGGAAGGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLGLGLA*LEEGPV
Trigger: CACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAACCTCCTGCCTGAGCTaGGAGATGCTTCTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: GQLKGRVEHSMAMERALRTSCLS*EMLLGG
Trigger: ACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGT...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp GCCATCGTGCTCCAGGGTTGGTGTCATTGCCACATCTaGTCAAGCTGTTACCCTGGCTGGGGAGGTATGGCT +
Preference number: 3 (lower is better)
Translates to: AIVLQGWCHCHI*SSCYPGWGGMA
Trigger: AGCCATACCTCCCCAGCCAGGGTAACAGCTTGATCAGATGTGGCAATGACACCAACCCTGGAGCACGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 72 bp CATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCTaGCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: HLPMLVSLSGVP*LVLPDRAKPCP
Trigger: TGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGACCAGCATAGGCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 72 bp CCCAGCAGGACTCAACAGGTAAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTGATGTGCAGGATGCTT +
Preference number: 3 (lower is better)
Translates to: PSRTQQVSPAMA*ASSFYLMCRML
Trigger: AAGCATCCTGCACATCAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACTTACCTGTTGAGTCCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCCCGGCTTCACCTGCTaGCTGTCTACTCCCATAGGA +
Preference number: 3 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMPGFTC*LSTPIG
Trigger: TCCTATGGGAGTAGACAGCAAGCAGGTGAAGCCGGG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 72 bp CTCTACACTCCACCATGGGTCTTGGTCCAGCATCACTaGCAGGGACATACCAGCCCTGTTCATAGGACTGGA +
Preference number: 3 (lower is better)
Translates to: LYTPPWVLVQHH*QGHTSPVHRTG
Trigger: TCCAGTCCTATGAACAGGGCTGGTATGTCCCTGCCAGTGATGCTGGACCAAGACCCATGGTGGAGTGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAAAGCAACCCTTCCCCTaGATAAAGGTTTGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LECPASFFLTELSPAHPSKQPFP*IKVCRR
Trigger: CCTTCTGCAAACCTTTATCAAGGGGAAGGGTTGCTT...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp AAACTGGTGACACTGGGTGCCTCTGGGGAGTGCAACTaGGGGTGGCTAAGGTGCCCATGTCCCTTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: KLVTLGASGECN*GWLRCPCPLEK
Trigger: TTTTTCTAAGGGACATGGGCACCTTAGCCACCCTCAGTTGCACTCCCCAGAGGCACCCAGTGTCACCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 72 bp CAAAAGCTCCTATGTGCCTGGCTCCATCACCGCAGCTaGGGAACTACTGTATGTGGAGCAGGCAGCACATCA +
Preference number: 3 (lower is better)
Translates to: QKLLCAWLHHRS*GTTVCGAGSTS
Trigger: TGATGTGCTGCCTGCTCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR GCA 72 bp CTTAACACCTGCCATCCTGCCCCAGGCAAGGACTCCTaGCAACTGGCTCCAGAAAAGGTCATTTATCAACCG +
Preference number: 3 (lower is better)
Translates to: LNTCHPAPGKDS*QLAPEKVIYQP
Trigger: CGGTTGATAAATGACCTTTTCTGGAGCCAGTTGGCAGGAGTCCTTGCCTGGGGCAGGATGGCAGGTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR GCA 72 bp CTGCAAGAACTAGTGGTGGGGACTTTGTTCCTAAAGTaGAGTGTCCCTGGTGCCAAGTGCTTGTGGGCAACC +
Preference number: 3 (lower is better)
Translates to: LQELVVGTLFLK*SVPGAKCLWAT
Trigger: GGTTGCCCACAAGCACTTGGCACCAGGGACACTGCACTTTAGGAACAAAGTCCCCACCACTAGTTCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACT +
Preference number: 3 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLVSAET*PKPSRT
Trigger: AGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGAC...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCACATGGCAGACCCTGTaGACTGGCTACCCAAAAGCC +
Preference number: 3 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLTWQTL*TGYPKA
Trigger: GGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATGT...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAGCTCTGTCGCCAGGTaGGAGTACAGTGGCGCAATC +
Preference number: 3 (lower is better)
Translates to: VLFPSVPALLPTQDHIASSSVAR*EYSGAI
Trigger: GATTGCGCCACTGTACTCCAACCTGGCGACAGAGCT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCAGTCAGGAGAAACACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSISQEKH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGTTTCTCCTGACT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCCTTAAGTTAAGTTCCTaGCCATCGTGCTCCAGGGTT +
Preference number: 3 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSLKLSS*PSCSRV
Trigger: AACCCTGGAGCACGATGGCAAGGAACTTAACTTAAG...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp GTGTCTGAAGATAGTCAAGGACAAGAGCCTGGGGTGTaGCGGACACATAGCTGGATGTGTGAGACTACGGGA +
Preference number: 3 (lower is better)
Translates to: VSEDSQGQEPGV*RTHSWMCETTG
Trigger: TCCCGTAGTCTCACACATCCAGCTATGTGTCCGTCACACCCCAGGCTCTTGTCCTTGACTATCTTCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 72 bp ACTAGAGGTAACCATATTGCCTCCTTGAGAAACTGGTaGCACTGGGTGCCTCTGGGGAGTGCAACTGAGGGT +
Preference number: 3 (lower is better)
Translates to: TRGNHIASLRNW*HWVPLGSATEG
Trigger: ACCCTCAGTTGCACTCCCCAGAGGCACCCAGTGTCACCAGTTTCTCAAGGAGGCAATATGGTTACCTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp GCCCACCTCCTGCCTGAGCTTGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTGACTTCCACATCTTTC +
Preference number: 3 (lower is better)
Translates to: AHLLPELGDASG*WRKCLLTSTSF
Trigger: GAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 72 bp AAAGCAGAGTGGTGTCTAGGTCAGCCCCTCAAGGGTTaGGAAGGAGAGCTGCTCTTTATTGAGCATTCCCCT +
Preference number: 3 (lower is better)
Translates to: KAEWCLGQPLKG*EGELLFIEHSP
Trigger: AGGGGAATGCTCAATAAAGAGCAGCTCTCCTTCCCAACCCTTGAGGGGCTGACCTAGACACCACTCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAACCTATAGAGACTaGAAATGCCTTCTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPPTYRD*KCLLFL
Trigger: AAGAAAAAGAAGGCATTTCAAGTCTCTATAGGTTGG...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGGAGGTCTTTTGCAACTaGCAAAGAGTCCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMEVFCN*QRVPEE
Trigger: CTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCTC...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCT +
Preference number: 3 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQARLDL*WLGGVS
Trigger: AGAAACTCCACCTAACCACAATAGATCAAGCCTGGC...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTATTTTATATGTTCACTaGACTGGATCATGGGGTACT +
Preference number: 3 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAILYVH*TGSWGT
Trigger: AGTACCCCATGATCCAGTCAAGTGAACATATAAAAT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGCTGCCTGCCTTGAACTaGGAGGTGAGGGCAGGGTGT +
Preference number: 3 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRLPALN*EVRAGC
Trigger: ACACCCTGCCCTCACCTCCAAGTTCAAGGCAGGCAG...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSTVSLL*GSSQKS
Trigger: GCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGT...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR-3UTR CAA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCAAAGGTGGGCTCTTATaGAGTCACATGGGACCTTGC +
Preference number: 3 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIKGGLL*SHMGPC
Trigger: GCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTTGTGTACCCTGCACGTaGCAGCCTCTTCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFCVPCT*QPLPRL
Trigger: CAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACA...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATCTTTCCTATGGCAATaGCATTTGTCTGCAGTACAT +
Preference number: 3 (lower is better)
Translates to: LECPASFFLTELSPAHPSSFLWQ*HLSAVH
Trigger: ATGTACTGCAGACAAATGCAATTGCCATAGGAAAGA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp CTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTaGACTCCTGGTTTTGGCTTGGCATGGTGGCTCATG +
Preference number: 3 (lower is better)
Translates to: LRPVDSDWNLHH*TPGFGLAWWLM
Trigger: CATGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
3UTR TCA 72 bp GAAGTAGAGGAGCTGAGATTCCAACCCAAGTCAACATaGTGGCAGAGCGGTCGAAGCTTTTCCTCTGCCACA +
Preference number: 3 (lower is better)
Translates to: EVEELRFQPKST*WQSGRSFSSAT
Trigger: TGTGGCAGAGGAAAAGCTTCGACCGCTCTGCCATCATGTTGACTTGGGTTGGAATCTCAGCTCCTCTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 72 bp CACCTCCTGCCTGAGCTTGGAGATGCTTCTGGGTGGTaGAGGAAATGCTTATTGACTTCCACATCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: HLLPELGDASGW*RKCLLTSTSFQ
Trigger: CTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 72 bp ACTGACATCCCACAGAAAGCCAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCTCAGGCCCTGACTGCA +
Preference number: 3 (lower is better)
Translates to: TDIPQKARLDLL*LGGVSPQALTA
Trigger: TGCAGTCAGGGCCTGAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTACTTAAGTTAAGTTCCTaGCCATCGTGCTCCAGGGTT +
Preference number: 3 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVLKLSS*PSCSRV
Trigger: AACCCTGGAGCACGATGGCAAGGAACTTAACTTAAG...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp TCCTTGTTACCTACCACTGCAGCTCCCTTGGGCCAATaGGATTTAGTAGAACTCTGCTGGGAGTTACTGGGA +
Preference number: 3 (lower is better)
Translates to: SLLPTTAAPLGQ*DLVELCWELLG
Trigger: TCCCAGTAACTCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp AGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACAAAGGAACAGGACAGC +
Preference number: 3 (lower is better)
Translates to: RSCSSLLTGMIL*GRRLRTKEQDS
Trigger: GCTGTCCTGTTCCTTTGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR TCA 72 bp AAAGGTGGGCTCTTATTGAGTCACATGGGACCTTGCTaGGACCCAATCCCAACGAGCCTAGTGAAACTCTCT +
Preference number: 3 (lower is better)
Translates to: KGGLLLSHMGPC*DPIPTSLVKLS
Trigger: AGAGAGTTTCACTAGGCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp GTCAACATGATGGCAGAGCGGTCGAAGCTTTTCCTCTaGCACATGATGCCAGTTGTCAATGGCGATCATGTT +
Preference number: 3 (lower is better)
Translates to: VNMMAERSKLFL*HMMPVVNGDHV
Trigger: AACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAAAGCTTCGACCGCTCTGCCATCATGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 72 bp ATAAAGGCTGAACCTTCTAGCCTGACCATTCCAAAGTaGCTGCACTCAGGTGGAGGTATGACTCTAGCACAC +
Preference number: 3 (lower is better)
Translates to: IKAEPSSLTIPK*LHSGGGMTLAH
Trigger: GTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGCCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGATGGTGTTAAGCTaGAGAAAGTTTGCAGATGGC +
Preference number: 3 (lower is better)
Translates to: GLLPTYDYITRACQPQCLPMVLS*RKFADG
Trigger: GCCATCTGCAAACTTTCTCAAGCTTAACACCATCGG...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTT +
Preference number: 3 (lower is better)
Translates to: GLLPTYDYITRACQPQCLSQTES*TDGVKL
Trigger: AAGCTTAACACCATCGGTCAATGACTCCGTTTGGCT...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCCTATGGCAATTGCATTaGTCTGCAGTACATTATAGT +
Preference number: 3 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSLWQLH*SAVHYS
Trigger: ACTATAATGTACTGCAGACAAATGCAATTGCCATAG...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp GACCCAAAGGTCAATACAAGGATCAGCACACCAAAGTaGCCAAAAGCAGCTACTGAAGATGTGACCCAGGAC +
Preference number: 3 (lower is better)
Translates to: DPKVNTRISTPK*PKAATEDVTQD
Trigger: GTCCTGGGTCACATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCTTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR GCA 72 bp CCTGAGCTTGGAGATGCTTCTGGGTGGTGGAGGAAATaGTTATTGACTTCCACATCTTTCCAGCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: PELGDASGWWRK*LLTSTSFQPNA
Trigger: AGCATTTGGCTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 72 bp CATGCCAAGAGGCTTAAGTTAAGTTCCTTGCCATCGTaGTCCAGGGTTGGTGTCATTGCCACATCTGATCAA +
Preference number: 3 (lower is better)
Translates to: HAKRLKLSSLPS*SRVGVIATSDQ
Trigger: TTGATCAGATGTGGCAATGACACCAACCCTGGAGCACGATGGCAAGGAACTTAACTTAAGCCTCTTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CCA 72 bp ACTGTGCTTTCTATGCACATGGCAGACCCTGTTGACTaGCTACCCAAAAGCCATTTGCTCCTTGTTACCTAC +
Preference number: 3 (lower is better)
Translates to: TVLSMHMADPVD*LPKSHLLLVTY
Trigger: GTAGGTAACAAGGAGCAAATGGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 72 bp TTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATaGCCAGCTCTCCTACTGACATCCCACAGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: LTDGVKLEKVCR*PALLLTSHRKP
Trigger: TGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 72 bp ATAGCCTCTGTGTCCACCCAGCCAGTTAATTGTTCATaGACCAAACTAGTGATCTGGCCTCAATCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: IASVSTQPVNCS*TKLVIWPQSLH
Trigger: GTGGAGAGATTGAGGCCAGATCACTAGTTTGGTCCATGAACAATTAACTGGCTGGGTGGACACAGAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 72 bp ACAGAATGCCAACATTTACTTATGAATACGCACCTCTaGAAGGACCAGGGGACCTGGACACCCCAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: TECQHLLMNTHL*KDQGTWTPQRN
Trigger: ATTTCTCTGGGGTGTCCAGGTCCCCTGGTCCTTCCAGAGGTGCGTATTCATAAGTAAATGTTGGCATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 72 bp ACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTaGTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTC +
Preference number: 3 (lower is better)
Translates to: TIPFQISYICLC*SLCLECPASFF
Trigger: GAAGAACGAGGCAGGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTCAACCCCTGCCTGCCTaGAACTTGGAGGTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: GSEMRCNITVMRLRSFATQPLPA*NLEVRA
Trigger: TGCCCTCACCTCCAAGTTCAAGGCAGGCAGGGGTTG...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTATAGTCCCAGCATTTaGGGAGGCCTAGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFYSPSI*GGLGGQ
Trigger: CTGCCCACCTAGGCCTCCCAAAATGCTGGGACTATA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCGTACATCTGTGTTGCTaGAGTGTCCCAGTATGGGAG +
Preference number: 3 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFVHLCC*SVPVWE
Trigger: CTCCCATACTGGGACACTCAAGCAACACAGATGTAC...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCTTACACACTAAATCCTaGTGTACAGAGCTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSLHTKS*CTELQA
Trigger: AGCCTGGAGCTCTGTACACAAGGATTTAGTGTGTAA...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCTTGATGAAGTATACTaGCACCAGGCCCCAGTTGTT +
Preference number: 3 (lower is better)
Translates to: SKFHALGIAEVTRAQATLLDEVY*HQAPVV
Trigger: AACAACTGGGGCCTGGTGCAAGTATACTTCATCAAG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTATCAAACACAGATCTGTaGACTCCAAATTCCATGCTC +
Preference number: 3 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVSNTDL*TPNSML
Trigger: GAGCATGGAATTTGGAGTCAACAGATCTGTGTTTGA...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTATTGATCCCTGTTCATTaGTTTTTGCTTCTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVLIPVH*FLLLLA
Trigger: AGCCAGCAGAAGCAAAAACAAATGAACAGGGATCAA...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTCCCGGCTTCACCTGCTaGCTGTCTACTCCCATAGGA +
Preference number: 3 (lower is better)
Translates to: GSEMRCNITVMRLRSFATPGFTC*LSTPIG
Trigger: TCCTATGGGAGTAGACAGCAAGCAGGTGAAGCCGGG...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGCAACCCCTGCCTGCCTaGAACTTGGAGGTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLQPLPA*NLEVRA
Trigger: TGCCCTCACCTCCAAGTTCAAGGCAGGCAGGGGTTG...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCCCGATGGTGTTAAGCTaGAGAAAGTTTGCAGATGGC +
Preference number: 3 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLPMVLS*RKFADG
Trigger: GCCATCTGCAAACTTTCTCAAGCTTAACACCATCGG...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTGCCCAAGTGAGTCCTaGGAGGGGACCCACTGGAGC +
Preference number: 3 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLCPSES*EGTHWS
Trigger: GCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGCA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTGCAAATTATCCCAAATaGTTCATCTGCTGCAACACC +
Preference number: 3 (lower is better)
Translates to: GLLPTYDYITRACQPQCLANYPK*FICCNT
Trigger: GGTGTTGCAGCAGATGAACAATTTGGGATAATTTGC...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 72 bp ACATACTGTGCTTTCTATGCACATGGCAGACCCTGTTaGCTGGCTACCCAAAAGCCATTTGCTCCTTGTTAC +
Preference number: 3 (lower is better)
Translates to: TYCAFYAHGRPC*LATQKPFAPCY
Trigger: GTAACAAGGAGCAAATGGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp TATGACTCTAGCACACAGTTATTGAACCTCCTCTCATaGCTTCATCGTTACTCTGTGGATAGCCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: YDSSTQLLNLLS*LHRYSVDSPRD
Trigger: GTCCCTGGGGCTATCCACAGAGTAACGATGAAGTCATGAGAGGAGGTTCAATAACTGTGTGCTAGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp GATAGAAGGGCAAATTTGTTCTCGCTTCTTGAGCTGTaGCATCCATCTTCTCCTGCCCTTGTACATCAGCAC +
Preference number: 3 (lower is better)
Translates to: DRRANLFSLLEL*HPSSPALVHQH
Trigger: GTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGAGAACAAATTTGCCCTTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
3UTR GCA 72 bp CTACCCAAAAGCCATTTGCTCCTTGTTACCTACCACTaGAGCTCCCTTGGGCCAATGAGATTTAGTAGAACT +
Preference number: 3 (lower is better)
Translates to: LPKSHLLLVTYH*SSLGPMRFSRT
Trigger: AGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAGGAGCAAATGGCTTTTGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CCA 72 bp ATTACCTGCTTCTGGTTGCTGTGTCTAAACCATGTCTaGACCAACATAGCTTCTGGTACTCTACACTCCACC +
Preference number: 3 (lower is better)
Translates to: ITCFWLLCLNHV*TNIASGTLHST
Trigger: GGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTCCAGACATGGTTTAGACACAGCAACCAGAAGCAGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp ACTGACATCCCACAGAAAGCCAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCTGCCAGGGAAAATACA +
Preference number: 3 (lower is better)
Translates to: TDIPQKARLDLL*LGGVSPARENT
Trigger: TGTATTTTCCCTGGCAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGACCAACCTATAGAGACTaGAAATGCCTTCTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGPTYRD*KCLLFL
Trigger: AAGAAAAAGAAGGCATTTCAAGTCTCTATAGGTTGG...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGAAGCTGCAGCTGGGTTaGGGGTCAGAAATGAGGTGC +
Preference number: 3 (lower is better)
Translates to: KPICIFTKSSILFIMSHKKLQLG*GSEMRC
Trigger: GCACCTCATTTCTGACCCCAAACCCAGCTGCAGCTT...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTT +
Preference number: 3 (lower is better)
Translates to: VATVIPISRYAVNNGLVCSQTES*TDGVKL
Trigger: AAGCTTAACACCATCGGTCAATGACTCCGTTTGGCT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCAGACAGAGTTTGAACTaGCAGAAACTGCTTGTCGGG +
Preference number: 3 (lower is better)
Translates to: VATVIPISRYAVNNGLVCRQSLN*QKLLVG
Trigger: CCCGACAAGCAGTTTCTGCAAGTTCAAACTCTGTCT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTTGCACCAGGCCCCAGTaGTTACCCTCATACATATTT +
Preference number: 3 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFCTRPQ*LPSYIF
Trigger: AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCA...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp CTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTaGCTCCAAGACAAGACTTTAGAGGGGCAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: LFFLHQAHLDLM*LQDKTLEGQLK
Trigger: CTTCAACTGCCCCTCTAAAGTCTTGTCTTGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp CTACAATCAACTGCGCTCCAGCCTGGACAACAGTACTaGTCTGATCTCCTTCCCTATTCTTTCTTCATCAAG +
Preference number: 3 (lower is better)
Translates to: LQSTALQPGQQY*SDLLPYSFFIK
Trigger: CTTGATGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCGCAGTTGATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp AACATACACAATTTAGCAGCAAAGGTGGGCTCTTATTaGGTCACATGGGACCTTGCTGAGACCCAATCCCAA +
Preference number: 3 (lower is better)
Translates to: NIHNLAAKVGSY*VTWDLAETQSQ
Trigger: TTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTTGCTGCTAAATTGTGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp AGGGGAGAATTGCATAAAATCAGTGTTAGGATGATCTaGCCCAGAAGGCATGTATTCCTCTTAGACGCTCAG +
Preference number: 3 (lower is better)
Translates to: RGELHKISVRMI*PRRHVFLLDAQ
Trigger: CTGAGCGTCTAAGAGGAATACATGCCTTCTGGGGCAGATCATCCTAACACTGATTTTATGCAATTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp ACAGAAGAAATTATTCTCTATTGGGCACGTACTCCATaGCAGGTGTTGTGCTGTGTGCCTCGTATACACAGA +
Preference number: 3 (lower is better)
Translates to: TEEIILYWARTP*QVLCCVPRIHR
Trigger: TCTGTGTATACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCCCAATAGAGAATAATTTCTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 72 bp GAAGCTTTTCCTCTGCCACATGATGCCAGTTGTCAATaGCGATCATGTTATCTGCGGAAAGTCCCTTTACAT +
Preference number: 3 (lower is better)
Translates to: EAFPLPHDASCQ*RSCYLRKVPLH
Trigger: ATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAAAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCATGGAGGAAATGCTTATaGACTTCCACATCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPWRKCL*TSTSFQ
Trigger: CTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCA...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGACTCAGGACCAGGCTTaGTGCAAGATGCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLTQDQA*CKMHRA
Trigger: TGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGT...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCATTTCCACAAATAAATaGTCAGACACTGCCAGATCA +
Preference number: 3 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSISTNK*SDTARS
Trigger: TGATCTGGCAGTGTCTGACAATTTATTTGTGGAAAT...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGATTCTATTATTGTTGGTaGCAGCTTGGCATCAGTTTT +
Preference number: 3 (lower is better)
Translates to: GGVSPARENTVARRMGFGFYYCW*QLGISF
Trigger: AAAACTGATGCCAAGCTGCAACCAACAATAATAGAA...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGAGATCTCAGCACCAGTaGCAAGGTGCAAATACACAT +
Preference number: 3 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMRSQHQ*QGANTH
Trigger: ATGTGTATTTGCACCTTGCAACTGGTGCTGAGATCT...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTATTCCCTCATCGAGTTaGGGTTGTAATTCTGAATTT +
Preference number: 3 (lower is better)
Translates to: VLFPSVPALLPTQDHIASIPSSS*GCNSEF
Trigger: AAATTCAGAATTACAACCCAAACTCGATGAGGGAAT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACTGCACCAGGCCCCAGTaGTTACCCTCATACATATTT +
Preference number: 3 (lower is better)
Translates to: GELLFIEHSPFGISLNSHCTRPQ*LPSYIF
Trigger: AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCA...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp TTGGCAATAGTCAAAAGTCACTTGAAATTCGTGAGATaGGAAGCTGCAGCTGGGTTTGGGGTCAGAAATGAG +
Preference number: 3 (lower is better)
Translates to: LAIVKSHLKFVR*EAAAGFGVRNE
Trigger: CTCATTTCTGACCCCAAACCCAGCTGCAGCTTCTCATCTCACGAATTTCAAGTGACTTTTGACTATTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR TCA 72 bp GGGACAAAGATCAACCTGAAAGCCAAACGGAGTCATTaGCCGATGGTGTTAAGCTTGAGAAAGTTTGCAGAT +
Preference number: 3 (lower is better)
Translates to: GTKINLKAKRSH*PMVLSLRKFAD
Trigger: ATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp GCCAGCTGTGTGTTAGGTCCCATTAGTAAAGGAGGATaGTACTTCCAAGGACTGTTTGGGAAAATGGAAAAT +
Preference number: 3 (lower is better)
Translates to: ASCVLGPISKGG*YFQGLFGKMEN
Trigger: ATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAATGGGACCTAACACACAGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 72 bp ACTGGCCAATTCTGTGAAATGCTATTACCAAACCCCTaGCCCCTGAATGTTTCCAGTCTATGTGGTATTACT +
Preference number: 3 (lower is better)
Translates to: TGQFCEMLLPNP*PLNVSSLCGIT
Trigger: AGTAATACCACATAGACTGGAAACATTCAGGGGGCAGGGGTTTGGTAATAGCATTTCACAGAATTGGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp AACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAACTTGTTGAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: NKGTGQPQQAKV*AEKKSKLVEQK
Trigger: CTTTTGCTCAACAAGTTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR CCA 72 bp GGACTGAGCGAAGTTCAAGGTCCTTCATTATTATCCTaGCTCTGCCACCAACTAAATGTGCGATTCAAGAAA +
Preference number: 3 (lower is better)
Translates to: GLSEVQGPSLLS*LCHQLNVRFKK
Trigger: TTTCTTGAATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACTTCGCTCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CCA 72 bp TGTTTCCAGTCTATGTGGTATTACTTGGAACCCACTTaGGAAAAGTTCCATTCCATAAATCCTGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: CFQSMWYYLEPT*EKFHSINPGRG
Trigger: GCCTCTGCCAGGATTTATGGAATGGAACTTTTCCCAAGTGGGTTCCAAGTAATACCACATAGACTGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp GCCTCATTAGTCATGTCAGATGACATAGTTAACACTTaGGGCCAGTACAGCCAGTTCATCAAAAGCTCCTAT +
Preference number: 3 (lower is better)
Translates to: ASLVMSDDIVNT*GQYSQFIKSSY
Trigger: ATAGGAGCTTTTGATGAACTGGCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAGAAATTATTCTCTATaGAGCACGTACTCCATGCCA +
Preference number: 3 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFRNYSL*STYSMP
Trigger: TGGCATGGAGTACGTGCTCAATAGAGAATAATTTCT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTTCAAACACAGATCTGTaGACTCCAAATTCCATGCTC +
Preference number: 3 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFSNTDL*TPNSML
Trigger: GAGCATGGAATTTGGAGTCAACAGATCTGTGTTTGA...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR TCA 72 bp AATTCTGTGAAATGCTATTACCAAACCCCTGCCCCCTaGATGTTTCCAGTCTATGTGGTATTACTTGGAACC +
Preference number: 3 (lower is better)
Translates to: NSVKCYYQTPAP*MFPVYVVLLGT
Trigger: GGTTCCAAGTAATACCACATAGACTGGAAACATTCAGGGGGCAGGGGTTTGGTAATAGCATTTCACAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 72 bp TCCTCTTTCTATGCATGGGCTCTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACCAATTGGTTTTTATGT +
Preference number: 3 (lower is better)
Translates to: SSFYAWALWESC*DFRRMTNWFLC
Trigger: ACATAAAAACCAATTGGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 72 bp CACTCATTAAAGTCCCCAACCTATAGAGACTTGAAATaGCTTCTTTTTCTTCAGTTAGACTCAGTCACCCCC +
Preference number: 3 (lower is better)
Translates to: HSLKSPTYRDLK*LLFLQLDSVTP
Trigger: GGGGGTGACTGAGTCTAACTGAAGAAAAAGAAGGCATTTCAAGTCTCTATAGGTTGGGGACTTTAATGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 72 bp CAATTGGAACCATTTGAATTCACACTCCTAATTACCTaGTTCTGGTTGCTGTGTCTAAACCATGTCTGGACC +
Preference number: 3 (lower is better)
Translates to: QLEPFEFTLLIT*FWLLCLNHVWT
Trigger: GGTCCAGACATGGTTTAGACACAGCAACCAGAAGCAGGTAATTAGGAGTGTGAATTCAAATGGTTCCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp GAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTaGATGTCCTGTATGGGATTTTATAGAGAAGCAGAT +
Preference number: 3 (lower is better)
Translates to: EKAEILSYLLDA*MSCMGFYREAD
Trigger: ATCTGCTTCTCTATAAAATCCCATACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAAAGGTGGGCTCTTATaGAGTCACATGGGACCTTGC +
Preference number: 3 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIKGGLL*SHMGPC
Trigger: GCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGCTAGTGGTGGGGACTTaGTTCCTAAAGTGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWLVVGT*FLKCSV
Trigger: GACACTGCACTTTAGGAACAAAGTCCCCACCACTAG...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTCCAGGGAAAATACAGTaGCTAGGAGAATGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIPGKIQ*LGEWAL
Trigger: CAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGG...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR GCA 72 bp TTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTaGAGCTTGGCATCAGTTTTAGTGTTGCCAACACTG +
Preference number: 3 (lower is better)
Translates to: LGLPSVHSIIVG*SLASVLVLPTL
Trigger: CAGTGTTGGCAACACTAAAACTGATGCCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp AGCGAAGTTCAAGGTCCTTCATTATTATCCTGGCTCTaGCACCAACTAAATGTGCGATTCAAGAAAATCACT +
Preference number: 3 (lower is better)
Translates to: SEVQGPSLLSWL*HQLNVRFKKIT
Trigger: AGTGATTTTCTTGAATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACTTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLTVSLL*GSSQKS
Trigger: GCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGT...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTAGATCTCAGCACCAGTaGCAAGGTGCAAATACACAT +
Preference number: 3 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIRSQHQ*QGANTH
Trigger: ATGTGTATTTGCACCTTGCAACTGGTGCTGAGATCT...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGAAGCCCATCAGCCCTaGGAGATCTTGTTCATAACC +
Preference number: 3 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIEAHQP*EILFIT
Trigger: GGTTATGAACAAGATCTCCAAGGGCTGATGGGCTTC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTATTTTATATGTTCACTaGACTGGATCATGGGGTACT +
Preference number: 3 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFILYVH*TGSWGT
Trigger: AGTACCCCATGATCCAGTCAAGTGAACATATAAAAT...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCT +
Preference number: 3 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIARLDL*WLGGVS
Trigger: AGAAACTCCACCTAACCACAATAGATCAAGCCTGGC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTTTCTATTATTGTTGGTaGCAGCTTGGCATCAGTTTT +
Preference number: 3 (lower is better)
Translates to: SSRSFIIILALPPTKCAIFYYCW*QLGISF
Trigger: AAAACTGATGCCAAGCTGCAACCAACAATAATAGAA...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTTCTACACTTCTAACATaGCCAGTGTGTTTTTCTGCC +
Preference number: 3 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQISTLLT*PVCFSA
Trigger: GGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGA...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGTTCATAACCTCCACATaGTCAATGCCCAGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWFITST*SMPSSV
Trigger: GACACTGCTGGGCATTGACAATGTGGAGGTTATGAA...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR TCA 72 bp GTTATCTCAATCAATTGTTCACTGTCAGTCACAGATTaGACTCCTCGTTCTATTCCTTCCCTCTTTCTCACT +
Preference number: 3 (lower is better)
Translates to: VISINCSLSVTD*TPRSIPSLFLT
Trigger: AGTGAGAAAGAGGGAAGGAATAGAACGAGGAGTTCAATCTGTGACTGACAGTGAACAATTGATTGAGATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR GCA 72 bp CAGCACCAGAGTGCTTCCAAATTGGTTTTGATTAATTaGATAGACATGTCTTTAATTGGTGCCAGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: QHQSASKLVLIN*IDMSLIGASVA
Trigger: TGCTACACTGGCACCAATTAAAGACATGTCTATGCAATTAATCAAAACCAATTTGGAAGCACTCTGGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
3UTR-3UTR CAA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCCAACTAGGACAGTATTaGCAAGGATCTGATAAGGGA +
Preference number: 3 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSQLGQY*QGSDKG
Trigger: TCCCTTATCAGATCCTTGCAAATACTGTCCTAGTTG...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCAGTTCATTCTATTATaGTTGGTTGCAGCTTGGCAT +
Preference number: 3 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSQFILL*LVAAWH
Trigger: ATGCCAAGCTGCAACCAACAATAATAGAATGAACTG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR TCA 72 bp AAATCAGAGAAGAGTTGTAAGTTAAGTGGAAAACCATaGCCCAAAGGTCAATACAAGGATCAGCACACCAAA +
Preference number: 3 (lower is better)
Translates to: KSEKSCKLSGKP*PKGQYKDQHTK
Trigger: TTTGGTGTGCTGATCCTTGTATTGACCTTTGGGTCATGGTTTTCCACTTAACTTACAACTCTTCTCTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp ATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTaGTTGCAGCTTGGCATCAGTTTTAGTGTTGCCAAC +
Preference number: 3 (lower is better)
Translates to: IFGTTFSSFYYC*LQLGISFSVAN
Trigger: GTTGGCAACACTAAAACTGATGCCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR-3UTR CAA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAACCAAAGGAGCACCTTaGGAATTCTTATTATGCCAG +
Preference number: 3 (lower is better)
Translates to: ISKGGCYFQGLFGKMENITKGAP*EFLLCQ
Trigger: CTGGCATAATAAGAATTCCAAAGGTGCTCCTTTGGT...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR-3UTR CAA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTCTATGTGGTATTACTaGGAACCCACTTGGGAAAAG +
Preference number: 3 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLSMWYY*EPTWEK
Trigger: CTTTTCCCAAGTGGGTTCCAAGTAATACCACATAGA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR-3UTR CAA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTCTATGGCAATTGCATTaGTCTGCAGTACATTATAGT +
Preference number: 3 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSLWQLH*SAVHYS
Trigger: ACTATAATGTACTGCAGACAAATGCAATTGCCATAG...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR GCA 72 bp ATACACTTACCTAAAAGGACAGATCTCAGCACCAGTTaGAAGGTGCAAATACACATATGTATCTGTAATACA +
Preference number: 3 (lower is better)
Translates to: IHLPKRTDLSTS*KVQIHICICNT
Trigger: TGTATTACAGATACATATGTGTATTTGCACCTTGCAACTGGTGCTGAGATCTGTCCTTTTAGGTAAGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp CATAAGAAGAGCTACAGTTACCATCATTCTGTGTTTTaGTTCTTTACAGTCCACTGTCTCTTTTTCACAATC +
Preference number: 3 (lower is better)
Translates to: HKKSYSYHHSVF*FFTVHCLFFTI
Trigger: GATTGTGAAAAAGAGACAGTGGACTGTAAAGAAGCAAAACACAGAATGATGGTAACTGTAGCTCTTCTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR-3UTR CAA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGATTTCCACAAATAAATaGTCAGACACTGCCAGATCA +
Preference number: 3 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLISTNK*SDTARS
Trigger: TGATCTGGCAGTGTCTGACAATTTATTTGTGGAAAT...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp CACACTTTAATAGGTGATAACATAAGCTTATTCAAATaGTACCCATGGTCAAATCATTTTTGGGACTACCTT +
Preference number: 3 (lower is better)
Translates to: HTLIGDNISLFK*YPWSNHFWDYL
Trigger: AAGGTAGTCCCAAAAATGATTTGACCATGGGTAGCATTTGAATAAGCTTATGTTATCACCTATTAAAGTGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR GCA 72 bp GGAGAGAAAGCAAATTATCCCAAATTGTTCATCTGCTaGAACACCATTATCTTCCTCTTTAAACTTTGTTAT +
Preference number: 3 (lower is better)
Translates to: GEKANYPKLFIC*NTIIFLFKLCY
Trigger: ATAACAAAGTTTAAAGAGGAAGATAATGGTGTTGCAGCAGATGAACAATTTGGGATAATTTGCTTTCTCTCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CCA 72 bp AGCTTATTCAAATGCTACCCATGGTCAAATCATTTTTaGGACTACCTTCAGTTCATTCTATTATTGTTGGTT +
Preference number: 3 (lower is better)
Translates to: SLFKCYPWSNHF*DYLQFILLLLV
Trigger: AACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGACCATGGGTAGCATTTGAATAAGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CCA 72 bp ATAGGTGATAACATAAGCTTATTCAAATGCTACCCATaGTCAAATCATTTTTGGGACTACCTTCAGTTCATT +
Preference number: 3 (lower is better)
Translates to: IGDNISLFKCYP*SNHFWDYLQFI
Trigger: AATGAACTGAAGGTAGTCCCAAAAATGATTTGACCATGGGTAGCATTTGAATAAGCTTATGTTATCACCTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCCTCCACCATGGGTCTTaGTCCAGCATCACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGLHHGS*SSITGR
Trigger: CCTGCCAGTGATGCTGGACCAAGACCCATGGTGGAG...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: GCLVFPFTAHLLPELGDASPGTA*SSVPGD
Trigger: GTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCT...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMASPGTA*SSVPGD
Trigger: GTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCT...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPSPAMA*ASSFYL
Trigger: CAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACT...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 72 bp CTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTaGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LHLCRAPTQDQA*CKMHRARGAPS
Trigger: ACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTGGTGGGCAGATTGGTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAGGQIG*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAACCAATCTGCCCACC...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTAGGCTTTGTGCAAGATaGACAGGGCAAGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQARLCAR*TGQEAP
Trigger: GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCGGTGGCCCATGGCCATaGCTTGAGTTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCGGPWP*LEFSCS
Trigger: GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACC...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACTGCTGGCTGGGGCTTaGGTTTGGCTTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSLLAGA*VWLCWR
Trigger: CCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGCAG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTCATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTCATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTCGCCTCCCAGGTTCTTaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GCLVFPFTAHLLPELGDARLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCAAGAACCTGGGAGGCG...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTTGGGTTTGGCTTTGCTaGAGGAAGGGCCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFWVWLC*RKGQCG
Trigger: CCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCA...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTAGTTGGAGGCTGCAGTaGGCTACAATCAACTGCGCT +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQASWRLQ*ATINCA
Trigger: AGCGCAGTTGATTGTAGCTCACTGCAGCCTCCAACT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGGGCAGGAGGATCACTTaGGCCATGGAGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLGRRIT*AMELEA
Trigger: AGCCTCCAACTCCATGGCTCAAGTGATCCTCCTGCC...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAGGACTCCAGCTGACATaGTGCAGTGTGTACCCTGCA +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSGLQLT*CSVYPA
Trigger: TGCAGGGTACACACTGCATCATGTCAGCTGGAGTCC...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCCACCCTCTCCATGGATaGCTCCCAGCTCCAACGCTA +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAHPLHG*LPAPTL
Trigger: TAGCGTTGGAGCTGGGAGTCATCCATGGAGAGGGTG...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTTCCAGACAGCAGGGCTaGTCCGCTCACGCGGATCAA +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLSRQQG*SAHADQ
Trigger: TTGATCCGCGTGAGCGGAGCAGCCCTGCTGTCTGGA...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTGTACCCTGCACGTTaGAGCCTCTTCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLVYPAR*SLFPGW
Trigger: CCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACAC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCAGTGTACCCTGCACGTTaGAGCCTCTTCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPVYPAR*SLFPGW
Trigger: CCAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACAC...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGGTGGCCCATGGCCATaGCTTGAGTTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLGGPWP*LEFSCS
Trigger: GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGCTTGGAGATGCTTCTaGGTGGTGGAGGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPAWRCF*VVEEML
Trigger: AAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGTAATTCTAGCACTTTaGGAGGCTGAAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPVILAL*EAEGGG
Trigger: TCCTCCCCCTTCAGCCTCCCAAAGTGCTAGAATTAC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFEEMHR*CNVQAR
Trigger: GCGAGCTTGCACGTTACATCACCGATGCATCTCTTC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTTCGCTTCTTGAGCTGTaGCATCCATCTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSSLLEL*HPSSPA
Trigger: GGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGA...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTAACTTATTTCAGAACTaGGCTCCAGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQANLFQN*APGQVQ
Trigger: CTGCACCTGGCCTGGAGCTCAGTTCTGAAATAAGTT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCTAGCTCCTGACTTGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMLAPDL*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACAAGTCAGGAGCTAG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGGACAGAGGCCAAGGTaGCCTCAGCCAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLGQRPR*PQPAKR
Trigger: TCTCTTTGCTGGCTGAGGTCACCTTGGCCTCTGTCC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGTGTGGGATTTTCTCTaGCTGAGGGACAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFVWDFL*LRDRGQ
Trigger: TTGGCCTCTGTCCCTCAGTCAGAGAAAATCCCACAC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACAGGTTAGGGGATGGCTaGCTCTTGGTGAACACTTGG +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHRLGDG*LLVNTW
Trigger: CCAAGTGTTCACCAAGAGTCAGCCATCCCCTAACCT...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR GCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHSPGTA*SSVPGD
Trigger: GTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCT...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLSPGTA*SSVPGD
Trigger: GTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCT...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCTCTAACTGTGCCTTTTaGCAGCTGTGTGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPSNCAF*QLCVRS
Trigger: GGACCTAACACACAGCTGGCAAAAGGCACAGTTAGA...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCATGCAGTGTGTACCCTaGACGTTGCAGCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAMQCVP*TLQPLP
Trigger: GGGAAGAGGCTGCAACGTGCAGGGTACACACTGCAT...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCAAGCTTGAGAAAGTTTaGAGATGGCCAGCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGKLEKV*RWPALL
Trigger: TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTT...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCAGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTGGGTGGAACATAGCATaGCAATGGAAAGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAGWNIA*QWKEPS
Trigger: TGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCC...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTTCATCGTTACTCTGTaGATAGCCCCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAFIVTL*IAPGTG
Trigger: ACCTGTCCCTGGGGCTATCCACAGAGTAACGATGAA...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTGTCCCAGAGGAGTTCTaGGCAGTAGTGGCATCATCA +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSVPEEF*AVVASS
Trigger: TGATGATGCCACTACTGCCCAGAACTCCTCTGGGAC...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTTTCCCAGGCTGGCTGTaGAAACTGAGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLFPGWL*KLSLLQ
Trigger: CTGGAGGAGGCTCAGTTTCCACAGCCAGCCTGGGAA...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACGGTATGGCTGTGACCTaGCCTTCCCAGCTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHGMAVT*PSQLKN
Trigger: ATTCTTGAGCTGGGAAGGCCAGGTCACAGCCATACC...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCGCTGAGGTTAGGGGATaGCTGACTCTTGGTGAACAC +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCAEVRG*LTLGEH
Trigger: GTGTTCACCAAGAGTCAGCCATCCCCTAACCTCAGC...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACCATTGCAGGAATCCTaGAGAGGTGATAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSPLQES*RGDSSG
Trigger: GCCAGAGCTATCACCTCTCCAGGATTCCTGCAATGG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR CAA 72 bp GGGGTCCCAGGCTCAAGAGAGCCCGGCTTCACCTGCTaGCTGTCTACTCCCATAGGAAACAGGAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: GVPGSREPGFTC*LSTPIGNRRNL
Trigger: AAGATTCCTCCTGTTTCCTATGGGAGTAGACAGCAAGCAGGTGAAGCCGGGCTCTCTTGAGCCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSLWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTCATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR TCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTGCTCCCTTGGGCCAATaGGATTTAGTAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSAPLGQ*DLVELC
Trigger: GCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGC...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTCCTGGACAACAGTACTaGTCTGATCTCCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAPGQQY*SDLLPY
Trigger: ATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGG...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGTTGGAGGCTGCAGTaGGCTACAATCAACTGCGCT +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLSWRLQ*ATINCA
Trigger: AGCGCAGTTGATTGTAGCTCACTGCAGCCTCCAACT...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGGGTGGGCAGATTGGTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMGGQIG*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAACCAATCTGCCCACC...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTCTGAACCTTCTAGCCTaGCCATTCCAAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GCLVFPFTAHLLPELGDALNLLA*PFQSGC
Trigger: GCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAG...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCCTAGCTCCTGACTTGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSLAPDL*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACAAGTCAGGAGCTAG...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATCTCCTTTTGGGGAATaGATCACTCCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSSPFGE*ITPSSG
Trigger: GCCAGAGGATGGAGTGATTCATTCCCCAAAAGGAGA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACTGTCATTGCCACATCTaGTCAAGCTGTTACCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHCHCHI*SSCYPG
Trigger: GCCAGGGTAACAGCTTGATCAGATGTGGCAATGACA...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCATGGCTGACTCTTGGTaGACACTTGGATGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAMADSW*TLGCQG
Trigger: CCCTTGGCATCCAAGTGTTCACCAAGAGTCAGCCAT...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR GCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTCATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTCATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTACATCCATCTTCTCCTaGCCTTGTACATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQATSIFS*PCTSAL
Trigger: GAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCGTCTTGGGAGAACAATaGCAAGCCAGTGTGGACACC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAVLGEQ*QASVDT
Trigger: GGTGTCCACACTGGCTTGGCATTGTTCTCCCAAGAC...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAACACACAACACAGCCTTaGCTGGGTCCCCGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQHTTQP*LGPRVY
Trigger: ATAAACCCGGGGACCCAGGCAAGGCTGTGTTGTGTG...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGATGCTTCTGGGTGGTaGAGGAAATGCTTATTGACT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPDASGW*RKCLLT
Trigger: AGTCAATAAGCATTTCCTCCACCACCCAGAAGCATC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTGGGTGGAACATAGCATaGCAATGGAAAGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSGWNIA*QWKEPS
Trigger: TGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCC...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGGAGGTGGCCAAATGTaGGCAAGAGAGGAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFGGGQM*AREEKA
Trigger: TGCTTTTTCCTCTCTTGCCCACATTTGGCCACCTCC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCTCTTGGTGAACACTTaGATGCCAAGGGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFLLVNT*MPRVPP
Trigger: TGGAGGAACCCTTGGCATCCAAGTGTTCACCAAGAG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTGCCCAAGTGAGTCCTTaGAGGGGACCCACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGAQVSP*RGPTGA
Trigger: AGCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGC...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCCCTAACCCACAAAGCTaGGCACTGCCCAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSPNPQS*ALPKDK
Trigger: CTTGTCCTTGGGCAGTGCCCAGCTTTGTGGGTTAGG...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTGACACTGGGTGCCTCTaGGGAGTGCAACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGDTGCL*GVQLRV
Trigger: CACCCTCAGTTGCACTCCCCAGAGGCACCCAGTGTC...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCCATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCTGGATCATGGGGTACTaGGATAGATGGGAAAACATT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPWIMGY*DRWENI
Trigger: AATGTTTTCCCATCTATCTCAGTACCCCATGATCCA...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGATATGCCAGTCTCTGCTaGGACATTGCCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRYASLC*DIAQTQ
Trigger: CTGGGTTTGGGCAATGTCTCAGCAGAGACTGGCATA...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTATGCCAGTCTCTGCTaGGACATTGCCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCYASLC*DIAQTQ
Trigger: CTGGGTTTGGGCAATGTCTCAGCAGAGACTGGCATA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCATAGCTAATGCTTATTaGGTACCGACTCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPIANAY*VPTPCQ
Trigger: TTGGCATGGAGTCGGTACTCAATAAGCATTAGCTAT...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAAGAATCACTGCTCGTTaGAAATGCATCGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSRITAR*KCIDRA
Trigger: TGCACGGTCGATGCATTTTCAACGAGCAGTGATTCT...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTTGCTCTTGGAATTGCTaGGGTGACAAGGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLCSWNC*GDKGTS
Trigger: GCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCA...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCTCTCCTACTAAATGGTaGGCTTCTCAAGGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCSPTKW*ASQGGQ
Trigger: TTGGCCACCTTGAGAAGCTCACCATTTAGTAGGAGA...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACAGCAACATTTATGCCTaGGTTTCAGAGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHSNIYA*VSELGC
Trigger: GCACCCCAACTCTGAAACTCAGGCATAAATGTTGCT...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTGTCATTGCCACATCTaGTCAAGCTGTTACCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMACHCHI*SSCYPG
Trigger: GCCAGGGTAACAGCTTGATCAGATGTGGCAATGACA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACTTGGGCAAGGGTGGTaGAGACTAATAGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSLGQGW*RLIGST
Trigger: TGTACTTCCTATTAGTCTTCACCACCCTTGCCCAAG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAACAAACCCCTGCCCCCTaGATGTTTCCAGTCTATGTG +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQQTPAP*MFPVYV
Trigger: CACATAGACTGGAAACATTCAGGGGGCAGGGGTTTG...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCAAGAGCCTGGGGTGTaGCGGACACATAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGQEPGV*RTHSWM
Trigger: CATCCAGCTATGTGTCCGTCACACCCCAGGCTCTTG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTCTCTGCTGAGACATTaGCCAAACCCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCSLLRH*PNPAGL
Trigger: GAGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCCCCCATTGATCCCCTaGACCTTTGCAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELPPLIP*TFAGHL
Trigger: TAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGG...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGCCAAATACATACTGTaGTTTCTATGCACATGGCAG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPAKYIL*FLCTWQ
Trigger: CTGCCATGTGCATAGAAAGCACAGTATGTATTTGGC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCAGACAGAGCTAAGCCCTaGCCATCCTTCAGTACCACT +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPDRAKP*PSFSTT
Trigger: AGTGGTACTGAAGGATGGGCAGGGCTTAGCTCTGTC...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGTTGGGAAGGAGAGCTaGTCTTTATTGAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFVGKES*SLLSIP
Trigger: GGGAATGCTCAATAAAGAGCAGCTCTCCTTCCCAAC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTAAGGGCTGTACTCTGTaGCTAGTGCAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGKGCTL*LVQAQA
Trigger: AGCCTGGGCCTGCACTAGGCACAGAGTACAGCCCTT...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCTCAGTAATACCAGCATaGTACTACCTTCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGSVIPA*YYLLYH
Trigger: ATGGTACAGAAGGTAGTAGCATGCTGGTATTACTGA...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCATGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: TNIASGTLHSTMGLGPASCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...TGATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAAGTCCTGCCATGGCCTaGGCTTCCTCCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGSPAMA*ASSFYL
Trigger: CAGGTAGAAGGAGGAAGCCCAGGCCATGGCAGGACT...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTTGCTTTCTATGCACATaGCAGACCCTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GCLVFPFTAHLLPELGDACFLCT*QTLLTG
Trigger: GCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCA...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGTTCATCGTTACTCTGTaGATAGCCCCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLFIVTL*IAPGTG
Trigger: ACCTGTCCCTGGGGCTATCCACAGAGTAACGATGAA...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATCCTCTTTCTATGCATaGGCTCTCTGGGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSSSFYA*ALWESC
Trigger: ACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCAGGTATGGCTGTGACCTaGCCTTCCCAGCTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPGMAVT*PSQLKN
Trigger: ATTCTTGAGCTGGGAAGGCCAGGTCACAGCCATACC...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCAAACTGTTAAGGAGCTaGAGGTCTATAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGKLLRS*RSISCC
Trigger: ACAACAGCTTATAGACCTCCAGCTCCTTAACAGTTT...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWEEMHR*CNVQAR
Trigger: GCGAGCTTGCACGTTACATCACCGATGCATCTCTTC...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR TCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCCTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSLWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCACATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGGTGGGAGGATCCCTTaGGACAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHGGRIP*DKEFET
Trigger: GGTCTCGAACTCCTTGTCTCAAGGGATCCTCCCACC...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTTCCTCCTTCTACCTaGTGTGCAGGATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCLPPST*CAGCLV
Trigger: TACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAG...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTATAGCTAATGCTTATTaGGTACCGACTCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAIANAY*VPTPCQ
Trigger: TTGGCATGGAGTCGGTACTCAATAAGCATTAGCTAT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCAACTTATTTCAGAACTaGGCTCCAGGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCNLFQN*APGQVQ
Trigger: CTGCACCTGGCCTGGAGCTCAGTTCTGAAATAAGTT...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCAGCAACATTTATGCCTaGGTTTCAGAGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMASNIYA*VSELGC
Trigger: GCACCCCAACTCTGAAACTCAGGCATAAATGTTGCT...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCGAAAAATGTAGCCTGTaGCCCATGCCAAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAEKCSL*PMPRGL
Trigger: TAAGCCTCTTGGCATGGGTCACAGGCTACATTTTTC...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCACATGGGACCTTGCTaGGACCCAATCCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSHMGPC*DPIPTS
Trigger: GCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTGGTCTCGATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLVVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAC...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGTCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLSYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSSYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCGAGCCCGGCTTCACCTaGTTGCTGTCTACTCCCATA +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSEPGFT*LLSTPI
Trigger: TATGGGAGTAGACAGCAAGCAGGTGAAGCCGGGCTC...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGATCAACAGGTAAGTCCTaGCATGGCCTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGSTGKS*HGLGFL
Trigger: GAGGAAGCCCAGGCCATGGCAGGACTTACCTGTTGA...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTCTCTGCTGAGACATTaGCCAAACCCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWSLLRH*PNPAGL
Trigger: GAGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGA...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTAAAAGCCTGAGAGTATaGCAGTCTCTGCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSKSLRV*QSLLRH
Trigger: ATGTCTCAGCAGAGACTGGCATACTCTCAGGCTTTT...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAGGAGCAGCACCAGAGTaGTTCCAAATTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSGAAPE*FQIGFD
Trigger: ATCAAAACCAATTTGGAAGCACTCTGGTGCTGCTCC...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTAGTTCCTTGCCATCGTaGTCCAGGGTTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLSSLPS*SRVGVI
Trigger: AATGACACCAACCCTGGAGCACGATGGCAAGGAACT...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAGGTTGGAAGCCTCATaGTGTTCCACCTGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASRLEAS*CSTCPG
Trigger: TCCGGGGCAGGTGGAACAGCATGAGGCTTCCAACCT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTTGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTCACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 4 (lower is better)
Translates to: GCLVFPFTAHLLPELGDAHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTG +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLGDASG*WRKCLL
Trigger: CAATAAGCATTTCCTCCACCACCCAGAAGCATCTCC...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCGCTTGGAGATGCTTCTaGGTGGTGGAGGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCAWRCF*VVEEML
Trigger: AAGCATTTCCTCCACCACCCAGAAGCATCTCCAAGC...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCAGACATGTCTTTAATTaGTGCCAGTGTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCRHVFN*CQCSSQ
Trigger: CTGGCTGCTACACTGGCACCAATTAAAGACATGTCT...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCGACATAGTTAACACTTaGGGCCAGTACAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSDIVNT*GQYSQF
Trigger: GAACTGGCTGTACTGGCCCCAAGTGTTAACTATGTC...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCAAAGTTCAGGTCTTTaGCAAGCCTCACACTTTTGC +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFQSSGL*QASHFC
Trigger: GCAAAAGTGTGAGGCTTGCCAAAGACCTGAACTTTG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTCCTCTTTCTATGCATaGGCTCTCTGGGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMASSFYA*ALWESC
Trigger: ACAGCTTTCCCAGAGAGCCCATGCATAGAAAGAGGA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTAGAAAATACAAGTCCCTaGGGTGGCCCATGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVENTSP*GGPWPC
Trigger: GCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCGATGCCAGTTGTCAATaGCGATCATGTTATCTGCGG +
Preference number: 4 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSDASCQ*RSCYLR
Trigger: CCGCAGATAACATGATCGCCATTGACAACTGGCATC...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 72 bp CTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGCATGCTTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LTAKQAETVSLL*GSSQKSMLPWA
Trigger: TGCCCAGGGAAGCATGCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
3UTR CAA 72 bp CCTGTGACCCATGCCAAGAGGCTTAAGTTAAGTTCCTaGCCATCGTGCTCCAGGGTTGGTGTCATTGCCACA +
Preference number: 4 (lower is better)
Translates to: PVTHAKRLKLSS*PSCSRVGVIAT
Trigger: TGTGGCAATGACACCAACCCTGGAGCACGATGGCAAGGAACTTAACTTAAGCCTCTTGGCATGGGTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLEEMHR*CNVQAR
Trigger: GCGAGCTTGCACGTTACATCACCGATGCATCTCTTC...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGEEMHR*CNVQAR
Trigger: GCGAGCTTGCACGTTACATCACCGATGCATCTCTTC...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGCATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTCGCTTCTTGAGCTGTaGCATCCATCTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSSLLEL*HPSSPA
Trigger: GGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGA...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR TCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCTCGCTTCTTGAGCTGTaGCATCCATCTTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELSLLEL*HPSSPA
Trigger: GGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGA...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR TCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGCACTTGGACCTCATGTaGCTCCAAGACAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLHLDLM*LQDKTL
Trigger: TAAAGTCTTGTCTTGGAGTCACATGAGGTCCAAGTG...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGGCAGGAGGATCACTTaGGCCATGGAGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSGRRIT*AMELEA
Trigger: AGCCTCCAACTCCATGGCTCAAGTGATCCTCCTGCC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCCTGAACCTTCTAGCCTaGCCATTCCAAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLLNLLA*PFQSGC
Trigger: GCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAG...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCATGGAGTGCAGTGGTGTaGCCTTGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSWSAVV*PWLTAS
Trigger: GCTTGCAGTGAGCCAAGGTCACACCACTGCACTCCA...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWTGMIL*GRRLRT
Trigger: TGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGT...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACACCCTCTCCATGGATaGCTCCCAGCTCCAACGCTA +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPHPLHG*LPAPTL
Trigger: TAGCGTTGGAGCTGGGAGTCATCCATGGAGAGGGTG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACGGCTCCCAAAACACTTaGTTTGTATCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHGSQNT*FVSFLW
Trigger: CCATAGGAAAGATACAAATCAAGTGTTTTGGGAGCC...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTAGAGTTGGGGTGCAGTaGTTTTTCTTTGATTCATGC +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFRVGVQ*FFFDSC
Trigger: GCATGAATCAAAGAAAAATCACTGCACCCCAACTCT...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCAGAGCTGCTCTTTATTaGGCATTCCCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCRAALY*AFPFWY
Trigger: ATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCT...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTGAACCATCTCATCCATaGAGCCCATCAGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGEPSHP*SPSALG
Trigger: TCCAAGGGCTGATGGGCTTCATGGATGAGATGGTTC...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCATGGTCTCGATCTCTTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIMVSIS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAAGAGATCGAGACCAT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCGCCTGGCCAACATGGTaGAACCCCGCCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLAWPTW*NPASTK
Trigger: TTTAGTAGAGGCGGGGTTTCACCATGTTGGCCAGGC...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATCTGGGGAGTGCAACTaGGGGTGGCTAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLSGECN*GWLRCP
Trigger: TGGGCACCTTAGCCACCCTCAGTTGCACTCCCCAGA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCCATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTAGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGACTTGTTACCTACCACTaGAGCTCCCTTGGGCCAATG +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGLVTYH*SSLGPM
Trigger: CATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAG...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCGGAGCAGCACCAGAGTaGTTCCAAATTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAGAAPE*FQIGFD
Trigger: ATCAAAACCAATTTGGAAGCACTCTGGTGCTGCTCC...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTCCAGACAGCAGGGCTaGTCCGCTCACGCGGATCAA +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQASRQQG*SAHADQ
Trigger: TTGATCCGCGTGAGCGGAGCAGCCCTGCTGTCTGGA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGGTGCAGGCCAGGGCTCTATTATTGTTGGTTaGAGCTTGGCATCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: RLRDQELKRPRQQGAGQGSIIVG*SLASVL
Trigger: TAAAACTGATGCCAAGCTGCAACCAACAATAATAGA...GCCCTGGCCTGCACCTTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTGTGGACTTAACACCTaGCATCCTGCCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASCGLNT*HPAPGK
Trigger: CTTGCCTGGGGCAGGATGGCAGGTGTTAAGTCCACA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCACAAAGCTGGGCACTaGCCAAGGACAAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASHKAGH*PRTRAV
Trigger: TACAGCCCTTGTCCTTGGGCAGTGCCCAGCTTTGTG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTGGAGACAGGCGCGCATaGGCAATTCTCTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFGDRRA*AILSPR
Trigger: GCGGGGAGAGAGAATTGCGCATGCGCGCCTGTCTCC...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR GCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAAAAATGCATCGACCGTaGAGACCTTTTTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSKMHRP*RPFSSN
Trigger: GTTTGAGGAAAAAGGTCTGCACGGTCGATGCATTTT...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHERPKW*QIKQAR
Trigger: TCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTC...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCTGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFCSVGD*TPTSGI
Trigger: GATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACA...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGATTGAACTCCTGGTTTTaGCTTGGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRLNSWF*LGMVAH
Trigger: ATGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAA...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGGCAGACCCTGTTGACTaGCTACCCAAAAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMADPVD*LPKSHL
Trigger: CAAATGGCTTTTGGGTAGCCAGTCAACAGGGTCTGC...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGTGCTTTCTATGCACATaGCAGACCCTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMCFLCT*QTLLTG
Trigger: GCCAGTCAACAGGGTCTGCCATGTGCATAGAAAGCA...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGATTCATCAAGCCCACTTaGACCTCATGTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRFIKPT*TSCDSK
Trigger: CTTGGAGTCACATGAGGTCCAAGTGGGCTTGATGAA...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCGTGGCTGCACTCAGGTaGAGGTATGACTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLVAALR*RYDSST
Trigger: TGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCGTCCCAGAGGAGTTCTaGGCAGTAGTGGCATCATCA +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSVPEEF*AVVASS
Trigger: TGATGATGCCACTACTGCCCAGAACTCCTCTGGGAC...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATTCCCAGGCTGGCTGTaGAAACTGAGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPFPGWL*KLSLLQ
Trigger: CTGGAGGAGGCTCAGTTTCCACAGCCAGCCTGGGAA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCAGAGTAGTGGACTCTaGGATGGGATACCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMQSSGL*DGIPAG
Trigger: CCCTGCCGGTATCCCATCCCAGAGTCCACTACTCTG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCCTGCAGAAGCTGACTaGCAGAGTAGTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSPAEAD*QSSGLW
Trigger: CCAGAGTCCACTACTCTGCCAGTCAGCTTCTGCAGG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTGGGTCACATTCACACTaGCGCCCAACACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLGSHSH*RPTQSL
Trigger: CAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGCTAGAAGTTTAAATTaGGTCACATTCACACTGGCG +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFARSLN*VTFTLA
Trigger: CGCCAGTGTGAATGTGACCCAATTTAAACTTCTAGC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAGTGAGCTTCTCAAGGTaGCCAAGAAACATGTCTTAT +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSVSFSR*PRNMSY
Trigger: ATAAGACATGTTTCTTGGCCACCTTGAGAAGCTCAC...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACGTGAGCTTCTCAAGGTaGCCAAGAAACATGTCTTAT +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHVSFSR*PRNMSY
Trigger: ATAAGACATGTTTCTTGGCCACCTTGAGAAGCTCAC...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTAAGGGCAAGGAGAAATaGAAACAGATGACATGTGAG +
Preference number: 4 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFKGKEK*KQMTCE
Trigger: CTCACATGTCATCTGTTTCCATTTCTCCTTGCCCTT...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAAAGGAAGAATATTCTTaGGCAAGGGTGGTGAAGACT +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSKEEYS*ARVVKT
Trigger: AGTCTTCACCACCCTTGCCCAAGAATATTCTTCCTT...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAACCAAACTAGTGATCTaGCCTCAATCTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQTKLVI*PQSLHC
Trigger: GCAGTGGAGAGATTGAGGCCAGATCACTAGTTTGGT...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTTGGTCCAGCATCACTaGCAGGGACATACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASLVQHH*QGHTSP
Trigger: AGGGCTGGTATGTCCCTGCCAGTGATGCTGGACCAA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGEEMHR*CNVQAR
Trigger: GCGAGCTTGCACGTTACATCACCGATGCATCTCTTC...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCCTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSILWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGGTGGGAGGATCCCTTaGGACAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPGGRIP*DKEFET
Trigger: GGTCTCGAACTCCTTGTCTCAAGGGATCCTCCCACC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATTCCAATGTTACAGCTaGGGAAACCAAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPFQCYS*GNQGSE
Trigger: TTCTGAGCCTTGGTTTCCTCAGCTGTAACATTGGAA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACATTTTCCTCTGCCACATaGTGCCAGTTGTCAATGGCG +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTFSSAT*CQLSMA
Trigger: CGCCATTGACAACTGGCATCATGTGGCAGAGGAAAA...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACTCAAAGAGATGGAATaGTCTGCCCAGGGCCATCTA +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTLKEME*SAQGHL
Trigger: TAGATGGCCCTGGGCAGATCATTCCATCTCTTTGAG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAAGAGACAGAAGTTTGTaGCCAGGGCCCAGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTRDRSL*PGPSGL
Trigger: GAGGCCGCTGGGCCCTGGTCACAAACTTCTGTCTCT...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGGCCAGCTCTCCTACTaGCATCCCACAGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLGQLSY*HPTESQ
Trigger: CTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCC...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCCACATGGGACCTTGCTaGGACCCAATCCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLHMGPC*DPIPTS
Trigger: GCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTG...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCTTAAGAAGCCAGAACTaGAACCCAAGCCTCACTCAT +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSLRSQN*NPSLTH
Trigger: ATGAGTGAGGCTTGGGTTTCAGTTCTGGCTTCTTAA...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCACCAAAAGCAGCTACTaGAGATGTGACCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSITKSSY*RCDPGP
Trigger: TGGTCCTGGGTCACATCTTCAGTAGCTGCTTTTGGT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCATCAGCACACCAAAGTaGCCAAAAGCAGCTACTGAA +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSISTPK*PKAATE
Trigger: TTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGAT...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATCCTTGAGAAACTGGTaGCACTGGGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLSLRNW*HWVPLG
Trigger: CCCCAGAGGCACCCAGTGTCACCAGTTTCTCAAGGA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCGATTTAGTAGAACTCTaGTGGGAGTTACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCDLVEL*WELLGE
Trigger: CTCTCCCAGTAACTCCCAGCAGAGTTCTACTAAATC...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAGATTTAGTAGAACTCTaGTGGGAGTTACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRDLVEL*WELLGE
Trigger: CTCTCCCAGTAACTCCCAGCAGAGTTCTACTAAATC...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCACATGTCTTTAATTGGTaGCAGTGTAGCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPHVFNW*QCSSQR
Trigger: TCTCTGGCTGCTACACTGGCACCAATTAAAGACATG...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGSSQRR*LTVRQH
Trigger: ATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCT...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCATGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTAAAGTTCTATGGCTTTaGCAGTTTAGACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAKVLWL*QFRQPF
Trigger: GAAAGGTTGTCTAAACTGCCAAAGCCATAGAACTTT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGCCTGGATGTCCTGTATaGGATTTTATAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPDVQDAWYSPSLPTSCLPGCPV*DFIEKQ
Trigger: CTGCTTCTCTATAAAATCCCATACAGGACATCCAGG...CAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAAACATAGCATGGCAATaGAAAGAGCCCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRNIAWQ*KEPSDF
Trigger: GAAGTCTGAGGGCTCTTTCCATTGCCATGCTATGTT...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAAAAGTCAAGTTTTCGTaGTTTAGGCTCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LECPASFFLTELSPAHPSKVKFS*FRLTLQ
Trigger: TTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTT...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAAAAAGCATGCTTCCCTaGGCACAGAGATACAGATTC +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQKSMLP*AQRYRF
Trigger: GAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCGGGTCACATTCACACTaGCGCCCAACACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAGSHSH*RPTQSL
Trigger: CAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTTGGCTGGGCAGTATATaGCCTATTCCAATGTTACAG +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLWLGSI*PIPMLQ
Trigger: CTGTAACATTGGAATAGGCCATATACTGCCCAGCCA...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAGAAAATACAAGTCCCTaGGGTGGCCCATGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPENTSP*GGPWPC
Trigger: GCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCCAGCCCCTCAAGGGTTaGGAAGGAGAGCTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSQPLKG*EGELLF
Trigger: AAAGAGCAGCTCTCCTTCCCAACCCTTGAGGGGCTG...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACAGCCCCTCAAGGGTTaGGAAGGAGAGCTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPQPLKG*EGELLF
Trigger: AAAGAGCAGCTCTCCTTCCCAACCCTTGAGGGGCTG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGGCCCAAGTGAGTCCTTaGAGGGGACCCACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMAQVSP*RGPTGA
Trigger: AGCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGC...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCCCACCGCACCCAGCCTaGCTGGATGTTTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILPPHPA*LDVFEG
Trigger: TCCTTCAAAAACATCCAGCCAGGCTGGGTGCGGTGG...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGTAGGAACCCTTTCTTaGTGCTCCTCTCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHVGTLS*CSSPPL
Trigger: CAGAGGTGGAGAGGAGCACCAAGAAAGGGTTCCTAC...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTATCACTCAACCTCCCTaGGCCAATTCCCTCATCGAG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASITQPP*ANSLIE
Trigger: CTCGATGAGGGAATTGGCCCAGGGAGGTTGAGTGAT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAAGGACCAGGGGACCTaGACACCCCAGAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASKDQGT*TPQRNL
Trigger: CAAATTTCTCTGGGGTGTCCAGGTCCCCTGGTCCTT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAATGCAACAATTACCACTaGGTAGGCCTTAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQCNNYH*VGLSKD
Trigger: ATCCTTGCTAAGGCCTACCCAGTGGTAATTGTTGCA...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp GAAAAGCCTGAGAGTATGCCAGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACTCAACAGGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EKPESMPVSAET*PKPSRTQQVSP
Trigger: AGGACTTACCTGTTGAGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGACTGGCATACTCTCAGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 72 bp CCTACTGACATCCCACAGAAAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCTCCTCAGGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: PTDIPQKARLDL*WLGGVSPQALT
Trigger: AGTCAGGGCCTGAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp CAGCAAAGGTGGGCTCTTATTGAGTCACATGGGACCTaGCTGAGACCCAATCCCAACGAGCCTAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: QQRWALIESHGT*LRPNPNEPSET
Trigger: AGTTTCACTAGGCTCGTTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 72 bp TCAGCAACAAAGCTGCAAGAACTAGTGGTGGGGACTTaGTTCCTAAAGTGCAGTGTCCCTGGTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SATKLQELVVGT*FLKCSVPGAKC
Trigger: GCACTTGGCACCAGGGACACTGCACTTTAGGAACAAAGTCCCCACCACTAGTTCTTGCAGCTTTGTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSLWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGGGTGGGAGGATCCCTTaGGACAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRGGRIP*DKEFET
Trigger: GGTCTCGAACTCCTTGTCTCAAGGGATCCTCCCACC...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTTGGATCATGGGGTACTaGGATAGATGGGAAAACATT +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPWIMGY*DRWENI
Trigger: AATGTTTTCCCATCTATCTCAGTACCCCATGATCCA...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR TCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTCTCTTTAAAGCTTCGTaGTGCTCATTGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPLFKAS*CSLRNC
Trigger: GCAATTTCGCAATGAGCATCACGAAGCTTTAAAGAG...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTTTCCTAGTTTCCTTTaGAAGATCGGACCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCFPSFL*KIGPKV
Trigger: GACTTTCGGTCCGATCTTTCAAAGGAAACTAGGAAA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCTCCATCACCGCAGCTaGGGAACTACTGTATGTGGA +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLLHHRS*GTTVCG
Trigger: TCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGCTGGCTGTGGAAACTaGGCCTCCTCCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHAGCGN*ASSRQQ
Trigger: CTGCTGTCTGGAGGAGGCTCAGTTTCCACAGCCAGC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCAGGAGTGGTGAAGACTaGAAAATACGTGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSRSGED*KIREQP
Trigger: TGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCT...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATGCTCTTGGAATTGCTaGGGTGACAAGGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPCSWNC*GDKGTS
Trigger: GCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTCAAACACAGATCTGTTaGCTCCAAATTCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLQTQIC*LQIPCS
Trigger: AGAGCATGGAATTTGGAGTCAACAGATCTGTGTTTG...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTGGACAGAGGCCAAGGTaGCCTCAGCCAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFGQRPR*PQPAKR
Trigger: TCTCTTTGCTGGCTGAGGTCACCTTGGCCTCTGTCC...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAGGGATTTTCTCTGACTaGGGGACAGAGGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKGIFSD*GTEAKV
Trigger: CACCTTGGCCTCTGTCCCTCAGTCAGAGAAAATCCC...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCGGGATTTTCTCTGACTaGGGGACAGAGGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAGIFSD*GTEAKV
Trigger: CACCTTGGCCTCTGTCCCTCAGTCAGAGAAAATCCC...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAGTGTGGGATTTTCTCTaGCTGAGGGACAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPVWDFL*LRDRGQ
Trigger: TTGGCCTCTGTCCCTCAGTCAGAGAAAATCCCACAC...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCGACTTTGAATTAGAATaGGCGTGGGGGCGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILDFELE*AWGRGQ
Trigger: TTGTCCCCGCCCCCACGCTCATTCTAATTCAAAGTC...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTAAATCAGTGTTAGGATaGTCTGCCCCAGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGKSVLG*SAPEGM
Trigger: CATGCCTTCTGGGGCAGATCATCCTAACACTGATTT...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCAAGGTGGGCTCTTATTaGGTCACATGGGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLKVGSY*VTWDLA
Trigger: AGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTT...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCCCTGCCTCAGCCTCCTaGGTAGTTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCPASAS*VVGTTG
Trigger: ACCTGTAGTCCCAACTACTCAGGAGGCTGAGGCAGG...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGTCCTTACTCAGCAGCTaGAGCGGGGAGCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMSLLSS*SGELKE
Trigger: TTCTTTCAGCTCCCCGCTTCAGCTGCTGAGTAAGGA...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGACCATATTGCCTCCTTaGGAAACTGGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKTILPP*ETGDTG
Trigger: CCCAGTGTCACCAGTTTCTCAAGGAGGCAATATGGT...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKSPGTA*SSVPGD
Trigger: GTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCT...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAACAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKQCTHI*REFASH
Trigger: GTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTG...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGGGGTGGTGGAGGAAATaGTTATTGACTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWGWWRK*LLTSTS
Trigger: AGATGTGGAAGTCAATAAGCATTTCCTCCACCACCC...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGAAAAGCCTGAGAGTATaGCAGTCTCTGCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMKSLRV*QSLLRH
Trigger: ATGTCTCAGCAGAGACTGGCATACTCTCAGGCTTTT...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTCTAACTGTGCCTTTTaGCAGCTGTGTGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSSNCAF*QLCVRS
Trigger: GGACCTAACACACAGCTGGCAAAAGGCACAGTTAGA...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCTCAAAAGCTCCTATGTaGCTGGCTCCATCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSSKAPM*LAPSPQ
Trigger: CTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTGA...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGAGACATGAGCCATCGTaGCTGGCCCACAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMRHEPS*LAHNFH
Trigger: GTGGAAATTGTGGGCCAGGCACGATGGCTCATGTCT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCTATTACCAAACCCCTaGCCCCTGAATGTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGLLPNP*PLNVSS
Trigger: ACTGGAAACATTCAGGGGGCAGGGGTTTGGTAATAG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAAGTGCAGTGTCCCTGGTaGCAAGTGCTTGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQVQCPW*QVLVGN
Trigger: GTTGCCCACAAGCACTTGGCACCAGGGACACTGCAC...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPERPKW*QIKQAR
Trigger: TCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTC...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSERPKW*QIKQAR
Trigger: TCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTC...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCTTGAACTCCTGGTTTTaGCTTGGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELLNSWF*LGMVAH
Trigger: ATGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAA...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCACACCATTGAACTCCTaGTTTTGGCTTGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELTPLNS*FWLGMV
Trigger: CACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGT...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGACACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCACTTGACTGGATCATaGGGTACTGAGATAGATGGG +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGHLTGS*GTEIDG
Trigger: CCCATCTATCTCAGTACCCCATGATCCAGTCAAGTG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGAACATAGCATGGCAATaGAAAGAGCCCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWNIAWQ*KEPSDF
Trigger: GAAGTCTGAGGGCTCTTTCCATTGCCATGCTATGTT...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTTCCAAGATGTCAACCTaGGAGGGCATATTTATTTAT +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSSKMST*EGIFIY
Trigger: ATAAATAAATATGCCCTCCCAGGTTGACATCTTGGA...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCCCAGTCTACAATTTCTCCATTGTaGGACATTTGGGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: YSGPGFVQDAQGKRRPQSTISPL*DIWVIS
Trigger: GGAAATAACCCAAATGTCCCACAATGGAGAAATTGT...AGACTGGGGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCCAGAGTAGTGGACTCTaGGATGGGATACCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCQSSGL*DGIPAG
Trigger: CCCTGCCGGTATCCCATCCCAGAGTCCACTACTCTG...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTAATTCTCAGCTACCCTaGGGGGAAGGCTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVNSQLP*GEGLLK
Trigger: CTTCAACAAGCCTTCCCCCCAGGGTAGCTGAGAATT...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTAATTCTCAGCTACCCTaGGGGGAAGGCTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASNSQLP*GEGLLK
Trigger: CTTCAACAAGCCTTCCCCCCAGGGTAGCTGAGAATT...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACAAGAAAGGAAGCCTATaGTTAACCCTTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHKKGSL*LTLDEV
Trigger: TACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTT...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATTTCCAGTCTCCTTTTaGGGAATGAATCACTCCATC +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPFPVSF*GMNHSI
Trigger: GATGGAGTGATTCATTCCCCAAAAGGAGACTGGAAA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCTTTGCTTCTGCTGGCTaGGGCTTGGGTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSFASAG*GLGLAL
Trigger: CAAAGCCAAACCCAAGCCCCAGCCAGCAGAAGCAAA...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTGCAGCCTGGACCTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIAAWTS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGGTCCAGGCTGC...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTACGCACCCAGCCTGGCTaGATGTTTTTGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVRTQPG*MFLKEE
Trigger: TTCCTCCTTCAAAAACATCCAGCCAGGCTGGGTGCG...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCATGAATACGCACCTCTaGAAGGACCAGGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLMNTHL*KDQGTW
Trigger: CCAGGTCCCCTGGTCCTTCCAGAGGTGCGTATTCAT...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp TCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATaGAACTCCTGGTTTTGGCTTGGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSACGLRLEFTP*NSWFWLGMVAH
Trigger: ATGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR TCA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: GQLKGRVEHSMAMERALRNKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCAAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPNKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCACAACAGTACTGATCTaGTCTCCTTCCCTATTCTTT +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCTTVLI*SPSLFF
Trigger: AAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGT...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTAGCACTTTGGGAGGCTaGAGGGGGAGGATCACTGGA +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFSTLGG*RGRITG
Trigger: TCCAGTGATCCTCCCCCTTCAGCCTCCCAAAGTGCT...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCGACTGCAAAGCAGGCTaGAACTGTAAGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELDCKAG*NCKPSF
Trigger: AAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTC...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR TCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAACTCCATCACCGCAGCTaGGGAACTACTGTATGTGGA +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKLHHRS*GTTVCG
Trigger: TCCACATACAGTAGTTCCTCAGCTGCGGTGATGGAG...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTTGGAATTGCTGAGGTaGCAAGGGCACAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQALELLR*QGHKQP
Trigger: GGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATTTTCCTCTGCCACATaGTGCCAGTTGTCAATGGCG +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPFSSAT*CQLSMA
Trigger: CGCCATTGACAACTGGCATCATGTGGCAGAGGAAAA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCTCAAAGAGATGGAATaGTCTGCCCAGGGCCATCTA +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLLKEME*SAQGHL
Trigger: TAGATGGCCCTGGGCAGATCATTCCATCTCTTTGAG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTAGCCAAACGGAGTCATTaGCCGATGGTGTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVAKRSH*PMVLSL
Trigger: CAAGCTTAACACCATCGGTCAATGACTCCGTTTGGC...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGTACATCTGTGTTGCTTaGGTGTCCCAGTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMYICVA*VSQYGR
Trigger: CCTCCCATACTGGGACACTCAAGCAACACAGATGTA...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGCCATACCTCAGGCCCTaGCTGCAAAGCAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMPYLRP*LQSRLK
Trigger: TTTCAGCCTGCTTTGCAGTCAGGGCCTGAGGTATGG...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAATCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCACAGGACCAGGCTTTGTaGAAGATGCACAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPQDQAL*KMHRAR
Trigger: TCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTG...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTCTTGTTACCTACCACTaGAGCTCCCTTGGGCCAATG +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCLVTYH*SSLGPM
Trigger: CATTGGCCCAAGGGAGCTGCAGTGGTAGGTAACAAG...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGGAGATTGAGGTCTTTTaGAACTTGCAAAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWEIEVF*NLQRVP
Trigger: TGGGACTCTTTGCAAGTTGCAAAAGACCTCAATCTC...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGCGTGAGATGAGAAGCTaGAGCTGGGTTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRREMRS*SWVWGQ
Trigger: CTGACCCCAAACCCAGCTGCAGCTTCTCATCTCACG...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATCAAAAGCTCCTATGTaGCTGGCTCCATCACCGCAG +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKSKAPM*LAPSPQ
Trigger: CTGCGGTGATGGAGCCAGGCACATAGGAGCTTTTGA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCATTATAGTTATTTATaGCCAGCTCTGTTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCHYSYL*PALFLL
Trigger: TAGGAGAAACAGAGCTGGGCATAAATAACTATAATG...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGACAGAGCTAAGCCCTaGCCATCCTTCAGTACCACT +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKDRAKP*PSFSTT
Trigger: AGTGGTACTGAAGGATGGGCAGGGCTTAGCTCTGTC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCTTGGGAGAACAATaGCAAGCCAGTGTGGACACC +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKVLGEQ*QASVDT
Trigger: GGTGTCCACACTGGCTTGGCATTGTTCTCCCAAGAC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTGGGCCAAATCTGTCCTaGCATCTGTTTTTCTATGGC +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASGPNLS*HLFFYG
Trigger: GCCATAGAAAAACAGATGGCAGGACAGATTTGGCCC...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCGTGTACATCTGTGTTaGTTGAGTGTCCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSRVHLC*LSVPVW
Trigger: CCATACTGGGACACTCAAGCAACACAGATGTACACG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGAGATGCCCAGATCATaGTCTACCCTTGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSEMPRS*STLGFR
Trigger: TCTAAACCCAAGGGTAGAGCATGATCTGGGCATCTC...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCCATGTCACCCCACCCTaGTTCTTTAAGATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSHVTPP*FFKIGR
Trigger: CCTTCCTATCTTAAAGAAGCAGGGTGGGGTGACATG...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCCTGGATGTCCTGTATaGGATTTTATAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMPGCPV*DFIEKQ
Trigger: CTGCTTCTCTATAAAATCCCATACAGGACATCCAGG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTACCTTTTAGATGCCTaGATGTCCTGTATGGGATTT +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCYLLDA*MSCMGF
Trigger: AAATCCCATACAGGACATCCAGGCATCTAAAAGGTA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGATGTGCAGGATGCTTaGTATTCCCCTTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPDVQDA*YSPSLP
Trigger: GGGCAGTGAAGGGGAATACCAAGCATCCTGCACATC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTCTGACCATTCCAAAGTaGCTGCACTCAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCLTIPK*LHSGGG
Trigger: ACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAG...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCACATTCCTCTCACCATaGGGTGAACCAATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLTFLSP*GEPILS
Trigger: GCTGAGAATTGGTTCACCCCATGGTGAGAGGAATGT...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAACATTCCTCTCACCATaGGGTGAACCAATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGTFLSP*GEPILS
Trigger: GCTGAGAATTGGTTCACCCCATGGTGAGAGGAATGT...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGCCCAACACAGAGCCTaGCCCACAGTTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHAQHRA*PTVSIT
Trigger: GGTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTATGGCTGGGCAGTATATaGCCTATTCCAATGTTACAG +
Preference number: 4 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVWLGSI*PIPMLQ
Trigger: CTGTAACATTGGAATAGGCCATATACTGCCCAGCCA...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATGTTTTTGCTTCTGCTaGCTGGGGCTTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKCFCFC*LGLGFG
Trigger: GCCAAACCCAAGCCCCAGCCAGCAGAAGCAAAAACA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGAGGAAAAAGCAGAGTaGTGTCTAGGTCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKEEKAE*CLGQPL
Trigger: GAGGGGCTGACCTAGACACCACTCTGCTTTTTCCTC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCGGAGGTGGCCAAATGTaGGCAAGAGAGGAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPGGGQM*AREEKA
Trigger: TGCTTTTTCCTCTCTTGCCCACATTTGGCCACCTCC...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCTTTAGTTTACTCTCCTaGCTCCACAGAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSFSLLS*LHRVPP
Trigger: TGGAGGGACTCTGTGGAGCCAGGAGAGTAAACTAAA...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGATCTATTGTGGTTAGGTaGAGTTTCTCCTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGSIVVR*SFSCQG
Trigger: TCCCTGGCAGGAGAAACTCCACCTAACCACAATAGA...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp CATCTCATCCATGAAGCCCATCAGCCCTTGGAGATCTaGTTCATAACCTCCACATTGTCAATGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HLIHEAHQPLEI*FITSTLSMPSS
Trigger: ACTGCTGGGCATTGACAATGTGGAGGTTATGAACAAGATCTCCAAGGGCTGATGGGCTTCATGGATGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp CCTACTGACATCCCACAGAAAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCTCCTGCCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTDIPQKARLDL*WLGGVSPAREN
Trigger: ATTTTCCCTGGCAGGAGAAACTCCACCTAACCACAATAGATCAAGCCTGGCTTTCTGTGGGATGTCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTCTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCLWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGACATCTGTTCGGTGGGTaGCTGGACGCCCACTTCGGG +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGHLFGG*LDAHFG
Trigger: CCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATG...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCTATAGAGAAGCAGATTaGACACAAAACCTATTTCCG +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCYREAD*TQNLFP
Trigger: CGGAAATAGGTTTTGTGTTCAATCTGCTTCTCTATA...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGCATGGCAGACCCTGTTaGCTGGCTACCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELHGRPC*LATQKP
Trigger: TGGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATG...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp CCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGACAACAGTACTGATCTaGTCTCCTTCCCTATTCTTT +
Preference number: 4 (lower is better)
Translates to: PRSSACGLRLEFTPLNSWTTVLI*SPSLFF
Trigger: AAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGT...CCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTGCTGGCTGTGGAAACTaGGCCTCCTCCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFAGCGN*ASSRQQ
Trigger: CTGCTGTCTGGAGGAGGCTCAGTTTCCACAGCCAGC...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCAGACTGAAAAATACGTaGGCAGCCAAAGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILRLKNT*AAKEGA
Trigger: GGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCT...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCAGGAGTGGTGAAGACTaGAAAATACGTGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILRSGED*KIREQP
Trigger: TGGCTGCTCACGTATTTTTCAGTCTTCACCACTCCT...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLTGMIL*GRRLRT
Trigger: TGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAGGACTCCAGCTGACATaGTGCAGTGTGTACCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRGLQLT*CSVYPA
Trigger: TGCAGGGTACACACTGCATCATGTCAGCTGGAGTCC...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACATTGGAATTGCTGAGGTaGCAAGGGCACAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTLELLR*QGHKQP
Trigger: GGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAA...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAACTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKLWESC*DFRRMT
Trigger: GGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAG...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCTTTCTCCTCAGGCCCTaGCTGCAAAGCAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCFLLRP*LQSRLK
Trigger: TTTCAGCCTGCTTTGCAGTCAGGGCCTGAGGAGAAA...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGGGACAAAGATCAACCTaGAAGCCAAACGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKGQRST*KPNGVI
Trigger: AATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCC...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTGGACAAAGATCAACCTaGAAGCCAAACGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLGQRST*KPNGVI
Trigger: AATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCC...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAAGGTGGGCTCTTATTaGGTCACATGGGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFKVGSY*VTWDLA
Trigger: AGCAAGGTCCCATGTGACTCAATAAGAGCCCACCTT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCAGCATAGGACTAGAATaGAACAAACCCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSISIGLE*NKPSSS
Trigger: AGAAGAGCTGGGTTTGTTTCATTCTAGTCCTATGCT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCAGCTACTGAAGATGTaGCCCAGGACCAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMQLLKM*PRTRKQ
Trigger: TTGTTTTCTGGTCCTGGGTCACATCTTCAGTAGCTG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMSASNQ*THICRE
Trigger: CTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGA...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILSYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCATCCTTCTACCTGATGTaGAGGATGCTTGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSSFYLM*RMLGIP
Trigger: GGGAATACCAAGCATCCTGCACATCAGGTAGAAGGA...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAGAGATTGAGGTCTTTTaGAACTTGCAAAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGEIEVF*NLQRVP
Trigger: TGGGACTCTTTGCAAGTTGCAAAAGACCTCAATCTC...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGCTTCGTGATGCTCATTaGGAAATTGCTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMLRDAH*EIALRK
Trigger: TTTTCTCAGAGCAATTTCGCAATGAGCATCACGAAG...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACATGCAGTGTGTACCCTaGACGTTGCAGCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHMQCVP*TLQPLP
Trigger: GGGAAGAGGCTGCAACGTGCAGGGTACACACTGCAT...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTATTGATGAAGTATACTTaGACCAGGCCCCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVLMKYT*TRPQLL
Trigger: TAACAACTGGGGCCTGGTGCAAGTATACTTCATCAA...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTTTTTCTTTGATTCATaGTCACTCCCAATACCTTAC +
Preference number: 4 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAFFFDS*SLPIPY
Trigger: GTAAGGTATTGGGAGTGAGCATGAATCAAAGAAAAA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATTGACCACTGGACTATaGCCAAGTGAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLLTTGL*PSESLE
Trigger: CTCCAAGGACTCACTTGGGCATAGTCCAGTGGTCAA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCAGCCACGTGCCACCATaGCAGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSSHVPP*QANFCI
Trigger: AATACAAAAATTAGCCTGGCATGGTGGCACGTGGCT...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCTTCTGTCCCAGCCTTaGTGCCAACACAAGATCATA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMLLSQP*CQHKII
Trigger: TATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCCAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGACCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGPLRSI*RILQER
Trigger: CCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGG...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELPLRSI*RILQER
Trigger: CCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGG...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVASSRG*GDPFWE
Trigger: TTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGC...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTGTAGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RTMPSQCGHQGLAISSLVASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...TACAAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGACACCATTGAACTCCTaGTTTTGGCTTGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMTPLNS*FWLGMV
Trigger: CACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCGCACTTAAAGTTCTATaGCTTTGGCAGTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCALKVL*LWQFRQ
Trigger: TTGTCTAAACTGCCAAAGCCATAGAACTTTAAGTGC...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTGTAATTCTAGCACTTTaGGAGGCTGAAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCVILAL*EAEGGG
Trigger: TCCTCCCCCTTCAGCCTCCCAAAGTGCTAGAATTAC...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTACAATTTCTCCATTGTaGGACATTTGGGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: VTSIFSCPCTSALLALRPTISPL*DIWVIS
Trigger: GGAAATAACCCAAATGTCCCACAATGGAGAAATTGT...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATAAAAGCATGCTTCCCTaGGCACAGAGATACAGATTC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHKSMLP*AQRYRF
Trigger: GAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTGACATAGTTAACACTTaGGGCCAGTACAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLDIVNT*GQYSQF
Trigger: GAACTGGCTGTACTGGCCCCAAGTGTTAACTATGTC...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCCAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSQQAKV*AEKKSK
Trigger: TTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTG...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGACCATCACCCTCTCCATaGATGACTCCCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRPSPSP*MTPSSN
Trigger: GTTGGAGCTGGGAGTCATCCATGGAGAGGGTGATGG...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp GGGAGAACAATGCCAAGCCAGTGTGGACACCAGGGGCTGGCAATAAGTAGCCTTAGGCGGATGACCAATTaGTTTTTATGTCCATTTGAA +
Preference number: 4 (lower is better)
Translates to: GRTMPSQCGHQGLAISSLRRMTN*FLCPFE
Trigger: TTCAAATGGACATAAAAACCAATTGGTCATCCGCCT...AAGGCTACTTATTGCCAGCCCCTGGTGTCCACACTGGCTTGGCATTGTTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTCTGCTGGCTGGGGCTTaGGTTTGGCTTTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSLLAGA*VWLCWR
Trigger: CCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGCAG...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTTTCCCTCCCTCAAATTaGTGGCAGCATAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLFPPSN*WQHNRY
Trigger: GTACCTGTTATGCTGCCACCAATTTGAGGGAGGGAA...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAGTGACGAACTCTGCTTaGGGGGATTGGAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTVTNSA*GDWNWF
Trigger: GAACCAGTTCCAATCCCCCCAAGCAGAGTTCGTCAC...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTGCAGCCTGGACCTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSAAWTS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGGTCCAGGCTGC...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCTACTTGATTCATAAGTaGTCTTTTACCGACCTACGA +
Preference number: 4 (lower is better)
Translates to: QALTAKQAETVSLLLGSSYLIHK*SFTDLR
Trigger: TCGTAGGTCGGTAAAAGACCACTTATGAATCAAGTA...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTAAGGTACAGGGGTACTaGCCCACAGCCTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIKVQGY*PTASSP
Trigger: TGGACTTGAGGCTGTGGGCCAGTACCCCTGTACCTT...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAAAAACAGGCTGCTGTGTaGGAATCCGCACATAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQKQAAV*ESAHRQ
Trigger: CTGCCTATGTGCGGATTCCCACACAGCAGCCTGTTT...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGATCTCACCCATCCTCATaGATCCAGTTCAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGSHPSS*IQFKNH
Trigger: ATGGTTCTTGAACTGGATCCATGAGGATGGGTGAGA...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAAGAATCACTGCTCGTTaGAAATGCATCGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKRITAR*KCIDRA
Trigger: TGCACGGTCGATGCATTTTCAACGAGCAGTGATTCT...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TTGCATAGACATGTCTTTAATTGGTGCCAGTGTAGCAGCCAGAGAACTTATGGGTCTCCTTTTGGGGAATaGATCACTCCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LHRHVFNWCQCSSQRTYGSPFGE*ITPSSG
Trigger: GCCAGAGGATGGAGTGATTCATTCCCCAAAAGGAGA...CCCATAAGTTCTCTGGCTGCTACACTGGCACCAATTAAAGACATGTCTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667240.1
CDS-3UTR TCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTGGCCAGCTCTCCTACTaGCATCCCACAGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIGQLSY*HPTESQ
Trigger: CTGGCTTTCTGTGGGATGTCAGTAGGAGAGCTGGCC...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCATTCCATGTGGACTTTaGATTAGAATGAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILIPCGL*IRMSVG
Trigger: CCCCACGCTCATTCTAATTCAAAGTCCACATGGAAT...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATTCAATGAGGACTCAGTaGGGATCAGAATTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHSMRTQ*GSEFRR
Trigger: TCTTCTGAATTCTGATCCTCACTGAGTCCTCATTGA...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATTTTATAGAAGTCTGTTaGCCACTGGACTATGCCCAA +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHFIEVC*PLDYAQ
Trigger: TTGGGCATAGTCCAGTGGTCAACAGACTTCTATAAA...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGGGTTTAGTTACTCCTaGACTCATAGGAAACATGAC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHGFSYS*THRKHD
Trigger: GTCATGTTTCCTATGAGTTCAGGAGTAACTAAACCC...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGGAAATTATTCTCTATTaGGCACGTACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKEIILY*ARTPCQ
Trigger: CTGGCATGGAGTACGTGCTCAATAGAGAATAATTTC...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTTTTGAAGGAGGAAGCTaGGGCAAGGAGATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIFEGGS*GKEMGL
Trigger: CAGACCCATCTCCTTGCCTCAGCTTCCTCCTTCAAA...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTAGCCAACATTTACTTATaGATACGCACCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVANIYL*IRTSGR
Trigger: CCTTCCAGAGGTGCGTATTCATAAGTAAATGTTGGC...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGAAAACTAACAGGTGTTaGCCCGGCGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLKTNRC*PGVVAH
Trigger: GTGAGCCACCACGCCGGGTCAACACCTGTTAGTTTT...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAATCGGTGATGTAACGTaGAAGCTCGCCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTIGDVT*KLALDL
Trigger: CAGATCTAGGGCGAGCTTGCACGTTACATCACCGAT...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQASYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTTACCCAAAAGCCATTTaGTCCTTGTTACCTACCACT +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVYPKAI*SLLPTT
Trigger: AGTGGTAGGTAACAAGGAGCAAATGGCTTTTGGGTA...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAAGGTCTTTTGCAACTTaGAAAGAGTCCCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSRSFAT*KESQRS
Trigger: ACTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCT...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCATTTGTTTTTGCTTCTaGTGGCTGGGGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPICFCF*WLGLGF
Trigger: AAACCCAAGCCCCAGCCAGCAGAAGCAAAAACAAAT...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAGTTGGGAAGGAGAGCTaGTCTTTATTGAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKVGKES*SLLSIP
Trigger: GGGAATGCTCAATAAAGAGCAGCTCTCCTTCCCAAC...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGAGTGTTAGGATGATCTaGCCCAGAAGGCATGTATTC +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMSVRMI*PRRHVF
Trigger: GAATACATGCCTTCTGGGGCAGATCATCCTAACACT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTAAGCCACGTGCCACCATaGCAGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVSHVPP*QANFCI
Trigger: AATACAAAAATTAGCCTGGCATGGTGGCACGTGGCT...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAACGATCATGGCTCACTaGAGCCTGGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGTIMAH*SLDLLG
Trigger: GCCCAGGAGGTCCAGGCTGCAGTGAGCCATGATCGT...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGACGATCATGGCTCACTaGAGCCTGGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMETIMAH*SLDLLG
Trigger: GCCCAGGAGGTCCAGGCTGCAGTGAGCCATGATCGT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCGATCTCAGCACCAGTTaGAAGGTGCAAATACACATA +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLDLSTS*KVQIHI
Trigger: TATGTGTATTTGCACCTTGCAACTGGTGCTGAGATC...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTGGAACCCTTTCTTGGTaGTCCTCTCCACCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSGTLSW*SSPPLA
Trigger: GGCCAGAGGTGGAGAGGAGCACCAAGAAAGGGTTCC...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAACACTCCTAATTACCTaGTTCTGGTTGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGTLLIT*FWLLCL
Trigger: TAGACACAGCAACCAGAAGCAGGTAATTAGGAGTGT...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASPLRSI*RILQER
Trigger: CCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCCAGCCAGAGAACTTATaGGAAAGCAGGATGTTATGC +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSQPENL*ESRMLC
Trigger: GCATAACATCCTGCTTTCCCATAAGTTCTCTGGCTG...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTACCTGCAGAAGCTGACTaGCAGAGTAGTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVPAEAD*QSSGLW
Trigger: CCAGAGTCCACTACTCTGCCAGTCAGCTTCTGCAGG...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAAAATTCTCAGCTACCCTaGGGGGAAGGCTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQNSQLP*GEGLLK
Trigger: CTTCAACAAGCCTTCCCCCCAGGGTAGCTGAGAATT...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGTTCCTCTCTTCTCACTaGCATGATCCTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVFLSSH*HDPLRQ
Trigger: CTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAA...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGCCCAACACAGAGCCTaGCCCACAGTTTCCATCACC +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSAQHRA*PTVSIT
Trigger: GGTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGC...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGATGTTTTTGCTTCTGCTaGCTGGGGCTTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRCFCFC*LGLGFG
Trigger: GCCAAACCCAAGCCCCAGCCAGCAGAAGCAAAAACA...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCTTTAGTTTACTCTCCTaGCTCCACAGAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFFSLLS*LHRVPP
Trigger: TGGAGGGACTCTGTGGAGCCAGGAGAGTAAACTAAA...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCACAAATTCCCAGAAGTaGAATTGGAGGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSTNSQK*NWRIRG
Trigger: TCCTCTGATCCTCCAATTCCACTTCTGGGAATTTGT...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCCCAGTTAATTGTTCATaGACCAAACTAGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIPVNCS*TKLVIW
Trigger: CCAGATCACTAGTTTGGTCCATGAACAATTAACTGG...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAACAACACAGCCTTGCCTaGGTCCCCGGGTTTATATTT +
Preference number: 4 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQQHSLA*VPGFIF
Trigger: AAATATAAACCCGGGGACCCAGGCAAGGCTGTGTTG...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACCTCTGGCCCTTGACATaGCTTCATCCCCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHLWPLT*LHPHKL
Trigger: AAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAG...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTACTTCCTCCTTCTACCTaGTGTGCAGGATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLLPPST*CAGCLV
Trigger: TACCAAGCATCCTGCACATCAGGTAGAAGGAGGAAG...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCACACTTGGACCTCATGTaGCTCCAAGACAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPHLDLM*LQDKTL
Trigger: TAAAGTCTTGTCTTGGAGTCACATGAGGTCCAAGTG...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCACTCTTTAAAGCTTCGTaGTGCTCATTGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSLFKAS*CSLRNC
Trigger: GCAATTTCGCAATGAGCATCACGAAGCTTTAAAGAG...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTTTCCTAGTTTCCTTTaGAAGATCGGACCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILFPSFL*KIGPKV
Trigger: GACTTTCGGTCCGATCTTTCAAAGGAAACTAGGAAA...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCTTTCCTAGTTTCCTTTaGAAGATCGGACCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSFPSFL*KIGPKV
Trigger: GACTTTCGGTCCGATCTTTCAAAGGAAACTAGGAAA...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTACTGGCATGATCCTCTaGGGCAGAAGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAITGMIL*GRRLRT
Trigger: TGTTCTCAACCTTCTGCCTCAGAGGATCATGCCAGT...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACAAACACAGATCTGTTaGCTCCAAATTCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPQTQIC*LQIPCS
Trigger: AGAGCATGGAATTTGGAGTCAACAGATCTGTGTTTG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTAGAGCTGCTCTTTATTaGGCATTCCCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLRAALY*AFPFWY
Trigger: ATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCT...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGACAGAAAGCCAGGCTTaGTCTATTGTGGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMTESQA*SIVVRW
Trigger: CCACCTAACCACAATAGATCAAGCCTGGCTTTCTGT...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCATTCCATGTGGACTTTaGATTAGAATGAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLIPCGL*IRMSVG
Trigger: CCCCACGCTCATTCTAATTCAAAGTCCACATGGAAT...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCAAATAACATTTCAATaGGGACTCAGTGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLQITFQ*GLSEDQ
Trigger: CTGATCCTCACTGAGTCCTCATTGAAATGTTATTTG...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTTCTGAAGAAGTTTCATaGCTCTTGCTACTAGAGGTA +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLSEEVS*LLLLEV
Trigger: TACCTCTAGTAGCAAGAGTCATGAAACTTCTTCAGA...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGACATCCATCTTCTCCTaGCCTTGTACATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRTSIFS*PCTSAL
Trigger: GAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGT...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTGAGCCCGGCTTCACCTaGTTGCTGTCTACTCCCATA +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATEPGFT*LLSTPI
Trigger: TATGGGAGTAGACAGCAAGCAGGTGAAGCCGGGCTC...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTGGGTGGTGGAGGAAATaGTTATTGACTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCGWWRK*LLTSTS
Trigger: AGATGTGGAAGTCAATAAGCATTTCCTCCACCACCC...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGTCCTTCTACCTGATGTaGAGGATGCTTGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVSFYLM*RMLGIP
Trigger: GGGAATACCAAGCATCCTGCACATCAGGTAGAAGGA...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTTCTTGCCATTCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFFLPFS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGAATGGCAAGAA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATACGCCTCCCAGGTTCTTaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCAAGAACCTGGGAGGCG...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATTCTTCCTCTTTCTATaGATGGGCTCTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKFFLFL*MGSLGK
Trigger: CTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACTTTCCTATGGCAATTaGATTTGTCTGCAGTACATT +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTLSYGN*ICLQYI
Trigger: AATGTACTGCAGACAAATGCAATTGCCATAGGAAAG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAAGACATGAGCCATCGTaGCTGGCCCACAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVRHEPS*LAHNFH
Trigger: GTGGAAATTGTGGGCCAGGCACGATGGCTCATGTCT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATCGCCCGGGCTGGAGTaGAATGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKISPGLE*NGTISA
Trigger: AGCTGAGATCGTGCCATTGCACTCCAGCCCGGGCGA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAATTCAACAGATTCTCCTaGCTCAGCCTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQFNRFS*LSLLSS
Trigger: ACTACTCAGGAGGCTGAGGCAGGAGAATCTGTTGAA...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATCCCAAATTGTTCATCTaGTGCAACACCATTATCTTC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHPKLFI*CNTIIF
Trigger: GAAGATAATGGTGTTGCAGCAGATGAACAATTTGGG...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTAAAATGCATCGACCGTaGAGACCCTTCAAAACACCC +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFKMHRP*RPFKTP
Trigger: GGGTGTTTTGAAGGGTCTGCACGGTCGATGCATTTT...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667240.1
CDS-3UTR CCA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLSFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTAAAGTCAAGTTTTCGTaGTTTAGGCTCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLKVKFS*FRLTLQ
Trigger: TTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTT...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAAAAGTCAAGTTTTCGTaGTTTAGGCTCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGKVKFS*FRLTLQ
Trigger: TTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTT...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCAGAGTAGTGGACTCTaGGATGGGATACCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEQSSGL*DGIPAG
Trigger: CCCTGCCGGTATCCCATCCCAGAGTCCACTACTCTG...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTCCTGCAGAAGCTGACTaGCAGAGTAGTGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIPAEAD*QSSGLW
Trigger: CCAGAGTCCACTACTCTGCCAGTCAGCTTCTGCAGG...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTACAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVQQAKV*AEKKSK
Trigger: TTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTG...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTCCATCACCCTCTCCATaGATGACTCCCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFPSPSP*MTPSSN
Trigger: GTTGGAGCTGGGAGTCATCCATGGAGAGGGTGATGG...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTGCTAGAAGTTTAAATTaGGTCACATTCACACTGGCG +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLARSLN*VTFTLA
Trigger: CGCCAGTGTGAATGTGACCCAATTTAAACTTCTAGC...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCCAAAGTTCAGGTCTTTaGCAAGCCTCACACTTTTGC +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAQSSGL*QASHFC
Trigger: GCAAAAGTGTGAGGCTTGCCAAAGACCTGAACTTTG...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAAGGCGGATGACCAATTaGTTTTTATGTCCATTTGAA +
Preference number: 4 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTRRMTN*FLCPFE
Trigger: TTCAAATGGACATAAAAACCAATTGGTCATCCGCCT...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCACCTGAGTTTCAGAGTTaGGGTGCAGTGATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPPEFQS*GAVIFL
Trigger: AAGAAAAATCACTGCACCCCAACTCTGAAACTCAGG...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAGATGCCAGTTGTCAATaGCGATCATGTTATCTGCGG +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTDASCQ*RSCYLR
Trigger: CCGCAGATAACATGATCGCCATTGACAACTGGCATC...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCATGAGCCATCGTGCCTaGCCCACAATTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCMSHRA*PTISTN
Trigger: ATTTGTGGAAATTGTGGGCCAGGCACGATGGCTCAT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTTTCTGTCAATGCCCTaGTCTCCCATAAATAATGCA +
Preference number: 4 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLFLSMP*SPINNA
Trigger: TGCATTATTTATGGGAGACCAGGGCATTGACAGAAA...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GACCAACATAGCTTCTGGTACTCTACACTCCACCATGGGTCTTGGTCCAGCATCCAATTTAACAACAAGTaGCATAGAGTTGGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: DQHSFWYSTLHHGSWSSIQFNNK*HRVGGL
Trigger: TAAGCCTCCAACTCTATGCCACTTGTTGTTAAATTG...GATGCTGGACCAAGACCCATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGACTATGTGGTATTACTTaGAACCCACTTGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: GGVSPARENTVARRMGFGLCGIT*NPLGKS
Trigger: ACTTTTCCCAAGTGGGTTCCAAGTAATACCACATAG...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGTGTCTAAACCATGTCTaGACCAACATAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMCLNHV*TNIASG
Trigger: ACCAGAAGCTATGTTGGTCCAGACATGGTTTAGACA...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp GGGGACAAAGATCAACCTGAAAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GDKDQPESQTES*TDGVKLEKVCR
Trigger: TCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGACTCCGTTTGGCTTTCAGGTTGATCTTTGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 72 bp CATCAGCCCTTGGAGATCTTGTTCATAACCTCCACATaGTCAATGCCCAGCAGTGTCCTAAAAACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HQPLEILFITST*SMPSSVLKTAS
Trigger: ACTTGCTGTTTTTAGGACACTGCTGGGCATTGACAATGTGGAGGTTATGAACAAGATCTCCAAGGGCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp TACCACTTCGTTGATGAACCTTTTTCCAGTCTCCTTTaGGGGAATGAATCACTCCATCCTCTGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: YHFVDEPFSSLL*GNESLHPLAPK
Trigger: TTTGGGAGCCAGAGGATGGAGTGATTCATTCCCCAAAAGGAGACTGGAAAAAGGTTCATCAACGAAGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMNKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPNKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGCCTGGACAACAGTACTaGTCTGATCTCCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELPGQQY*SDLLPY
Trigger: ATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGG...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAAGCACTTTGGGAGGCTaGAGGGGGAGGATCACTGGA +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENISTLGG*RGRITG
Trigger: TCCAGTGATCCTCCCCCTTCAGCCTCCCAAAGTGCT...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATGGAGTGCAGTGGTGTaGCCTTGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIWSAVV*PWLTAS
Trigger: GCTTGCAGTGAGCCAAGGTCACACCACTGCACTCCA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCTTTCCTAGTTTCCTTTaGAAGATCGGACCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFFPSFL*KIGPKV
Trigger: GACTTTCGGTCCGATCTTTCAAAGGAAACTAGGAAA...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGACTGCAAAGCAGGCTaGAACTGTAAGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCDCKAG*NCKPSF
Trigger: AAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCCTCTCACCATGGGGTaGACCAATTCTCAGCTACCC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEPLTMG*TNSQLP
Trigger: GGGTAGCTGAGAATTGGTTCACCCCATGGTGAGAGG...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCAGAGATTTTAGGCGGATaGCCAATTGGTTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPEILGG*PIGFYV
Trigger: GACATAAAAACCAATTGGTCATCCGCCTAAAATCTC...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACTCTCCTACTAAATGGTaGGCTTCTCAAGGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHSPTKW*ASQGGQ
Trigger: TTGGCCACCTTGAGAAGCTCACCATTTAGTAGGAGA...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGGCTCCCAAAACACTTaGTTTGTATCTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKGSQNT*FVSFLW
Trigger: CCATAGGAAAGATACAAATCAAGTGTTTTGGGAGCC...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGTTACAACATTAAGATaGCTAACGATATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SFTDLRLHHKSMPATVSSVTTLR*LTICVQ
Trigger: CTGCACACATATCGTTAGTCATCTTAATGTTGTAAC...GGAAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGGTTACAACATTAAGATaGCTAACGATATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKVTTLR*LTICVQ
Trigger: CTGCACACATATCGTTAGTCATCTTAATGTTGTAAC...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTAAGTCCAGTTTCTTCTaGGAGGTAATATTACACACT +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLKSSFF*EVILHT
Trigger: AGTGTGTAATATTACCTCTCAGAAGAAACTGGACTT...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCCCTAAGGGTGCCTACTaGGTCATCTGGGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSPKGAY*VIWARS
Trigger: TGATCTGGCCCAGATGACTCAGTAGGCACCCTTAGG...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAACATCCATCTTCTCCTaGCCTTGTACATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLTSIFS*PCTSAL
Trigger: GAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGT...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR GCA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGATCCACACATAAACAATaGTCAATAAAGGGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGSTHKQ*SIKGSY
Trigger: ATAGCTACCCTTTATTGAGCATTGTTTATGTGTGGA...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGAGGTCTTTTGCAACTTaGAAAGAGTCCCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRRSFAT*KESQRS
Trigger: ACTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCT...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTCATGTCTTTAATTGGTaGCAGTGTAGCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFHVFNW*QCSSQR
Trigger: TCTCTGGCTGCTACACTGGCACCAATTAAAGACATG...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAAGCAGCCAAAGAAGGTaGCTAACAGTGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVSSQRR*LTVRQH
Trigger: ATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTTGATGAAGTATACTTaGACCAGGCCCCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQALMKYT*TRPQLL
Trigger: TAACAACTGGGGCCTGGTGCAAGTATACTTCATCAA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATCACATCGAAAGCCACTaGTATACTAAAGAATCATAC +
Preference number: 4 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHHIESH*YTKESY
Trigger: GTATGATTCTTTAGTATAGCAGTGGCTTTCGATGTG...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTACCAGTCAGGCTTCTTaGCGACTACCACCACGTTGT +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQITSQAS*RLPPRC
Trigger: ACAACGTGGTGGTAGTCGGCAAGAAGCCTGACTGGT...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGCAATCTCCACTCACTaGAACCTCTGCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWAISTH*NLCLPG
Trigger: ACCCGGAAGGCAGAGGTTGCAGTGAGTGGAGATTGC...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCCAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIWGDPF*EANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTATTGAACTCCTGGTTTTaGCTTGGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLLNSWF*LGMVAH
Trigger: ATGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAA...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTCTGACCATTCCAAAGTaGCTGCACTCAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATLTIPK*LHSGGG
Trigger: ACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAG...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGAAAGTCAAGTTTTCGTaGTTTAGGCTCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMKVKFS*FRLTLQ
Trigger: TTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACACAGCCAGAGAACTTATaGGAAAGCAGGATGTTATGC +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTQPENL*ESRMLC
Trigger: GCATAACATCCTGCTTTCCCATAAGTTCTCTGGCTG...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAATTTCCAGTCTCCTTTTaGGGAATGAATCACTCCATC +
Preference number: 4 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKFPVSF*GMNHSI
Trigger: GATGGAGTGATTCATTCCCCAAAAGGAGACTGGAAA...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTTTTGCTTCTGCTGGCTaGGGCTTGGGTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFFASAG*GLGLAL
Trigger: CAAAGCCAAACCCAAGCCCCAGCCAGCAGAAGCAAA...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGAGGAAAAAGCAGAGTaGTGTCTAGGTCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSEEKAE*CLGQPL
Trigger: GAGGGGCTGACCTAGACACCACTCTGCTTTTTCCTC...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGGCAAAAGAGACCATATaGCCCATAAAGACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMAKETI*PIKTPL
Trigger: TAAAGGAGTCTTTATGGGCCATATGGTCTCTTTTGC...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTTACTTGATTCATAAGTaGTCTTTTACCGACCTACGA +
Preference number: 4 (lower is better)
Translates to: GLLPTYDYITRACQPQCLYLIHK*SFTDLR
Trigger: TCGTAGGTCGGTAAAAGACCACTTATGAATCAAGTA...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCAGGTTGGAGTACAGTaGCGCAATCTCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSQVGVQ*RNLHSL
Trigger: CAGTGAGTGGAGATTGCGCCACTGTACTCCAACCTG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGGCAGCCAAATGTGAATaGTTTGCTCTGGATAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMAAKCE*FALDKS
Trigger: GGACTTATCCAGAGCAAACCATTCACATTTGGCTGC...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATACATGGCAGACCCTGTTaGCTGGCTACCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIHGRPC*LATQKP
Trigger: TGGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATG...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGTTGAAATTCGTGAGATaGGAAGCTGCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELLKFVR*EAAAGF
Trigger: AAACCCAGCTGCAGCTTCTCATCTCACGAATTTCAA...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR TCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTGACTGCAAAGCAGGCTaGAACTGTAAGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIDCKAG*NCKPSF
Trigger: AAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTC...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTCCTCTCACCATGGGGTaGACCAATTCTCAGCTACCC +
Preference number: 4 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVPLTMG*TNSQLP
Trigger: GGGTAGCTGAGAATTGGTTCACCCCATGGTGAGAGG...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGCCTCTCACCATGGGGTaGACCAATTCTCAGCTACCC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWPLTMG*TNSQLP
Trigger: GGGTAGCTGAGAATTGGTTCACCCCATGGTGAGAGG...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGAGACTGAAAAATACGTaGGCAGCCAAAGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLRLKNT*AAKEGA
Trigger: GGCACCTTCTTTGGCTGCTCACGTATTTTTCAGTCT...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TCCAAATTCCATGCTCTTGGAATTGCTGAGGTGACAAGGGCACAAGCAACCCTTCAAGGCTCAGAAAAATaGAGTGATTTGCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: SKFHALGIAEVTRAQATLQGSEK*SDLQDY
Trigger: GTAATCTTGCAAATCACTTCATTTTTCTGAGCCTTG...AAGGGTTGCTTGTGCCCTTGTCACCTCAGCAATTCCAAGAGCATGGAATTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTCTCTGGGAAAGCTGTTaGGATTTTAGGCGGATGACC +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSLWESC*DFRRMT
Trigger: GGTCATCCGCCTAAAATCTCAACAGCTTTCCCAGAG...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAAGAGTTGGGGTGCAGTaGTTTTTCTTTGATTCATGC +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTRVGVQ*FFFDSC
Trigger: GCATGAATCAAAGAAAAATCACTGCACCCCAACTCT...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTTGGGAAAACCTGGTaGGATTGCCTGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSVGKTW*DCLVQR
Trigger: TCTTTGCACCAGGCAATCTCACCAGGTTTTCCCAAC...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAACAGAAAGCCAGGCTTaGTCTATTGTGGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVTESQA*SIVVRW
Trigger: CCACCTAACCACAATAGATCAAGCCTGGCTTTCTGT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGGGTTTAGTTACTCCTaGACTCATAGGAAACATGAC +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCGFSYS*THRKHD
Trigger: GTCATGTTTCCTATGAGTTCAGGAGTAACTAAACCC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTGTCTGTCTCCCTCACTaGAATGTGTGCTCACGAGGA +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIVCLPH*NVCSRG
Trigger: TCCTCGTGAGCACACATTTCAGTGAGGGAGACAGAC...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATACATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIHLPRV*QSPRSL
Trigger: GAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATG...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCCTACAACCACGTCTaGATCAAACCAGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGAYNHV*IKPVHA
Trigger: TGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGC...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATCAACAGGTAAGTCCTaGCATGGCCTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENISTGKS*HGLGFL
Trigger: GAGGAAGCCCAGGCCATGGCAGGACTTACCTGTTGA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTTCTTGCCATTCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATFLPFS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGAATGGCAAGAA...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCCTTTCCTATGGCAATTaGATTTGTCTGCAGTACATT +
Preference number: 4 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPLSYGN*ICLQYI
Trigger: AATGTACTGCAGACAAATGCAATTGCCATAGGAAAG...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp GGGACAAACAATGAATTGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTAAGAATTTGTTTTTGCTTCTaGTGGCTGGGGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GTNNELSHRVRSSGAMLRICFCF*WLGLGF
Trigger: AAACCCAAGCCCCAGCCAGCAGAAGCAAAAACAAAT...TCTTAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTTTGACCACTGGACTATaGCCAAGTGAGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSLTTGL*PSESLE
Trigger: CTCCAAGGACTCACTTGGGCATAGTCCAGTGGTCAA...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGATTCAAGCAATTCTCCTaGCTCAGCCTCTCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGFKQFS*LSLSGS
Trigger: GCTACCCGAGAGGCTGAGGCAGGAGAATTGCTTGAA...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCACATCGAAAGCCACTaGTATACTAAAGAATCATAC +
Preference number: 4 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMHIESH*YTKESY
Trigger: GTATGATTCTTTAGTATAGCAGTGGCTTTCGATGTG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTGCAAACTTTGCTCAGTaGTCCAGCATTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIANFAQ*SSIWPR
Trigger: CCTGGGCCAAATGCTGGAGCACTGAGCAAAGTTTGC...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGCCGGGTGTAGCAGCATaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLPGVAA*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATGCTGCTACACCCGG...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVERPKW*QIKQAR
Trigger: TCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTC...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFPLRSI*RILQER
Trigger: CCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGG...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKSFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: VATVIPISRYAVNNGLVCKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTGATGCTTCTGGGTGGTaGAGGAAATGCTTATTGACT +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFDASGW*RKCLLT
Trigger: AGTCAATAAGCATTTCCTCCACCACCCAGAAGCATC...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAAAAAGCATGCTTCCCTaGGCACAGAGATACAGATTC +
Preference number: 4 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLKSMLP*AQRYRF
Trigger: GAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS-3UTR CCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACAGACATGTCTTTAATTaGTGCCAGTGTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHRHVFN*CQCSSQ
Trigger: CTGGCTGCTACACTGGCACCAATTAAAGACATGTCT...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACACCTGAGTTTCAGAGTTaGGGTGCAGTGATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTPEFQS*GAVIFL
Trigger: AAGAAAAATCACTGCACCCCAACTCTGAAACTCAGG...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACAAAGGGCAAGGAGAAATaGAAACAGATGACATGTGAG +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTKGKEK*KQMTCE
Trigger: CTCACATGTCATCTGTTTCCATTTCTCCTTGCCCTT...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTATCTATTGTGGTTAGGTaGAGTTTCTCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVSIVVR*SFSSGP
Trigger: AGGGCCTGAGGAGAAACTCCACCTAACCACAATAGA...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAGCCTCTCGGGTAGCTaGGATTACAGACACACACCA +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEISLSGS*DYRHTP
Trigger: TGGTGTGTGTCTGTAATCCCAGCTACCCGAGAGGCT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGAGCCTCTCGGGTAGCTaGGATTACAGACACACACCA +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMESLSGS*DYRHTP
Trigger: TGGTGTGTGTCTGTAATCCCAGCTACCCGAGAGGCT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTCATTCTATTATTGTTaGTTGCAGCTTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILSFYYC*LQLGIS
Trigger: ACTGATGCCAAGCTGCAACCAACAATAATAGAATGA...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTCCTTGTGTACTCATTTaGAGGTTTAAAATTTCACTG +
Preference number: 4 (lower is better)
Translates to: VLFPSVPALLPTQDHIASPCVLI*RFKISL
Trigger: CAGTGAAATTTTAAACCTCCAAATGAGTACACAAGG...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCCCTTCATTATTATCCTaGCTCTGCCACCAACTAAAT +
Preference number: 4 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLPSLLS*LCHQLN
Trigger: ATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGG...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp CAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTaGCAAAGAGTCCCAGAGGAGTTCTGGGCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: QYYSNEIEVFCN*QRVPEEFWAVV
Trigger: CACTACTGCCCAGAACTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 72 bp CTCACTGAAATGTGTGCTCACGAGGAGGAACATTTCTaGGGGTCTTGTTTATTGTGTCTAGAACAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LTEMCAHEEEHF*GSCLLCLEQHH
Trigger: ATGATGCTGTTCTAGACACAATAAACAAGACCCCAAGAAATGTTCCTCCTCGTGAGCACACATTTCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp ATTATTCTCTATTGGGCACGTACTCCATGCCAGGTGTaGTGCTGTGTGCCTCGTATACACAGAAGAAATTAT +
Preference number: 4 (lower is better)
Translates to: IILYWARTPCQV*CCVPRIHRRNY
Trigger: ATAATTTCTTCTGTGTATACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCCCAATAGAGAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp ATGTTTCCAGTCTATGTGGTATTACTTGGAACCCACTaGGGAAAAGTTCCATTCCATAAATCCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MFPVYVVLLGTH*GKVPFHKSWQR
Trigger: CCTCTGCCAGGATTTATGGAATGGAACTTTTCCCAAGTGGGTTCCAAGTAATACCACATAGACTGGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp AAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTaGCACCAGGCCCCAGTTGTTACCCTCATACATATT +
Preference number: 4 (lower is better)
Translates to: KGSLWLTLDEVY*HQAPVVTLIHI
Trigger: AATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 72 bp GAATCACTCCATCCTCTGGCTCCCAAAACACTTGATTaGTATCTTTCCTATGGCAATTGCATTTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESLHPLAPKTLD*YLSYGNCICLQ
Trigger: CTGCAGACAAATGCAATTGCCATAGGAAAGATACAAATCAAGTGTTTTGGGAGCCAGAGGATGGAGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTGCCAAACGGAGTCATTaGCCGATGGTGTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIAKRSH*PMVLSL
Trigger: CAAGCTTAACACCATCGGTCAATGACTCCGTTTGGC...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGACTTTGAATTAGAATaGGCGTGGGGGCGGGGACAA +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLDFELE*AWGRGQ
Trigger: TTGTCCCCGCCCCCACGCTCATTCTAATTCAAAGTC...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTTCTGGGTGGGCTGACTaGAGAAGAAGTAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSSGWAD*RRSNWR
Trigger: TCTCCAATTACTTCTTCTTCAGTCAGCCCACCCAGA...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGCTGGCTGGATGTTTTTaGAGGAGGAAGCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWLAGCF*RRKLRQ
Trigger: TTGCCTCAGCTTCCTCCTTCAAAAACATCCAGCCAG...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCGGGGTGATACCCAAATaGGTGGAGGTCCAAAGCATA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSGVIPK*VEVQSI
Trigger: TATGCTTTGGACCTCCACTCATTTGGGTATCACCCC...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGCTCTTCCAACAGGGGTaGTACCCAAATGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWLFQQG*YPNEWR
Trigger: CCTCCACTCATTTGGGTATCACCCCTGTTGGAAGAG...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAAGTGTCATTTTCTACTaGTGCAGGTTGGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVSVIFY*CRLEAS
Trigger: TGAGGCTTCCAACCTGCATCAGTAGAAAATGACACT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGGATCTCTTGACCTTGTaGTCCACCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWDLLTL*STHLSL
Trigger: GAGACTGAGGTGGGTGGATCACAAGGTCAAGAGATC...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGGAGCTACCTTTTAGATaGCTGGATGTCCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKELPFR*LDVLYG
Trigger: CCCATACAGGACATCCAGGCATCTAAAAGGTAGCTC...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTTCAAGCAATTCTCCTaGCTCAGCCTCTCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLFKQFS*LSLSGS
Trigger: GCTACCCGAGAGGCTGAGGCAGGAGAATTGCTTGAA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTGATCTCAGCACCAGTTaGAAGGTGCAAATACACATA +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIDLSTS*KVQIHI
Trigger: TATGTGTATTTGCACCTTGCAACTGGTGCTGAGATC...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCATAAGCACTTTGCCATaGTGTCAAATACTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFISTLP*CQILFR
Trigger: TCTGAAGAGTATTTGACAGCATGGCAAAGTGCTTAT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAATAAGCACTTTGCCATaGTGTCAAATACTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLISTLP*CQILFR
Trigger: TCTGAAGAGTATTTGACAGCATGGCAAAGTGCTTAT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCGTGTACATCTGTGTTaGTTGAGTGTCCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSRVHLC*LSVPVW
Trigger: CCATACTGGGACACTCAAGCAACACAGATGTACACG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATACCATGCCAGGTGTTGTaGTGTGTGCCTCGTATACAC +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIPCQVL*CVPRIH
Trigger: GTGTATACGAGGCACACAGCACAACACCTGGCATGG...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACATCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTSFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTT +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLLSSVR*VTGRPL
Trigger: AAGTGGGCGTCCAGTCACCCACCGAACAGATGACAA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTACACCATTGAACTCCTaGTTTTGGCTTGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATTPLNS*FWLGMV
Trigger: CACCATGCCAAGCCAAAACCAGGAGTTCAATGGTGT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCATTCTTATTTATAAAATaGAGATGGCTGGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RSSLDNSTDLISFPILSSFLFIK*RWLVQR
Trigger: CCTTTGGACCAGCCATCTCCATTTTATAAATAAGAA...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGTGGCTGCACTCAGGTaGAGGTATGACTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIVAALR*RYDSST
Trigger: TGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGAAAGTCAAGTTTTCGTaGTTTAGGCTCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRKVKFS*FRLTLQ
Trigger: TTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTT...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTTCCTCTCTTCTCACTaGCATGATCCTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIFLSSH*HDPLRQ
Trigger: CTGCCTCAGAGGATCATGCCAGTGAGAAGAGAGGAA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTATCATTCTATTATTGTTaGTTGCAGCTTGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLSFYYC*LQLGIS
Trigger: ACTGATGCCAAGCTGCAACCAACAATAATAGAATGA...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGTGTTTCCAGTCTATGTaGTATTACTTGGAACCCACT +
Preference number: 4 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMCFQSM*YYLEPT
Trigger: AGTGGGTTCCAAGTAATACCACATAGACTGGAAACA...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTGTGGGATCCTGGCCTaGGACCAGGAGCATATAAAT +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEICGILA*DQEHIN
Trigger: ATTTATATGCTCCTGGTCCCAGGCCAGGATCCCACA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp AATACTGGGAAAGGGGTGATTCAACTAGGACAGTATTaGCAAGGATCTGATAAGGGAGACACTGTAGAACAT +
Preference number: 4 (lower is better)
Translates to: NTGKGVIQLGQY*QGSDKGDTVEH
Trigger: ATGTTCTACAGTGTCTCCCTTATCAGATCCTTGCAAATACTGTCCTAGTTGAATCACCCCTTTCCCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 72 bp AATGTGTGCTCACGAGGAGGAACATTTCTTGGGGTCTaGTTTATTGTGTCTAGAACAGCATCATACACAGAT +
Preference number: 4 (lower is better)
Translates to: NVCSRGGTFLGV*FIVSRTASYTD
Trigger: ATCTGTGTATGATGCTGTTCTAGACACAATAAACAAGACCCCAAGAAATGTTCCTCCTCGTGAGCACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp GGAATGAATCACTCCATCCTCTGGCTCCCAAAACACTaGATTTGTATCTTTCCTATGGCAATTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: GMNHSILWLPKH*ICIFPMAIAFV
Trigger: GACAAATGCAATTGCCATAGGAAAGATACAAATCAAGTGTTTTGGGAGCCAGAGGATGGAGTGATTCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
3UTR CAA 72 bp AAGTATGGGAGCATCATTTTGGGGACAAACAATGAATaGTCCCATAGAGTGAGAAGTTCAGGAGCCATGTTA +
Preference number: 4 (lower is better)
Translates to: KYGSIILGTNNE*SHRVRSSGAML
Trigger: TAACATGGCTCCTGAACTTCTCACTCTATGGGACAATTCATTGTTTGTCCCCAAAATGATGCTCCCATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
3UTR CAA 72 bp GGAAGTACAAAGGCACAAAAGTATGGGAGCATCATTTaGGGGACAAACAATGAATTGTCCCATAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GSTKAQKYGSII*GTNNELSHRVR
Trigger: TCTCACTCTATGGGACAATTCATTGTTTGTCCCCAAAATGATGCTCCCATACTTTTGTGCCTTTGTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAINKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTTGAACCTCCTCTCATaGCTTCATCGTTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATLNLLS*LHRYSV
Trigger: CACAGAGTAACGATGAAGTCATGAGAGGAGGTTCAA...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACGAGATTTTAGGCGGATaGCCAATTGGTTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: GELLFIEHSPFGISLNSHEILGG*PIGFYV
Trigger: GACATAAAAACCAATTGGTCATCCGCCTAAAATCTC...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTAATTGTCCCATAGAGTaGGAAGTTCAGGAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFNCPIE*EVQEPC
Trigger: ACATGGCTCCTGAACTTCTCACTCTATGGGACAATT...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAAATCAGTGTTAGGATaGTCTGCCCCAGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIKSVLG*SAPEGM
Trigger: CATGCCTTCTGGGGCAGATCATCCTAACACTGATTT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGATCTGGGTGGGCTGACTaGAGAAGAAGTAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGSGWAD*RRSNWR
Trigger: TCTCCAATTACTTCTTCTTCAGTCAGCCCACCCAGA...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTTACATCTGTGTTGCTTaGGTGTCCCAGTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVYICVA*VSQYGR
Trigger: CCTCCCATACTGGGACACTCAAGCAACACAGATGTA...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGTCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLSYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGATCATATCGCTCTTCTTaGTCTTCTAGAAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGSYRSS*SSRSLA
Trigger: GGCGAGGCTTCTAGAAGAGCAAGAAGAGCGATATGA...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTTTCTTCCTCTTTCTATaGATGGGCTCTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFFFLFL*MGSLGK
Trigger: CTTTCCCAGAGAGCCCATGCATAGAAAGAGGAAGAA...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATTTTTCTTTGATTCATaGTCACTCCCAATACCTTAC +
Preference number: 4 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKFFFDS*SLPIPY
Trigger: GTAAGGTATTGGGAGTGAGCATGAATCAAAGAAAAA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR GCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTACTTTGTTCCTAAAGTaGAGTGTCCCTGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEITLFLK*SVPGAK
Trigger: CTTGGCACCAGGGACACTGCACTTTAGGAACAAAGT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTTCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFSFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGTCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELSFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CCA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTATACCTTTTAGATGCCTaGATGTCCTGTATGGGATTT +
Preference number: 4 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLYLLDA*MSCMGF
Trigger: AAATCCCATACAGGACATCCAGGCATCTAAAAGGTA...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTTAGTAGAACTCTGCTaGGAGTTACTGGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATLVELC*ELLGEL
Trigger: AAGCTCTCCCAGTAACTCCCAGCAGAGTTCTACTAA...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGTTCATCAAGCCCACTTaGACCTCATGTGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLFIKPT*TSCDSK
Trigger: CTTGGAGTCACATGAGGTCCAAGTGGGCTTGATGAA...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGACATTCCTCTCACCATaGGGTGAACCAATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMETFLSP*GEPILS
Trigger: GCTGAGAATTGGTTCACCCCATGGTGAGAGGAATGT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGCAACAAGCTAAGGTCTaGGCAGAGAAGAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLQQAKV*AEKKSK
Trigger: TTTGGATTTCTTCTCTGCCCAGACCTTAGCTTGTTG...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGAGAAAGTTTGCAGATaGCCAGCTCTCCTACTGACA +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWEKVCR*PALLLT
Trigger: TGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTC...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGTTAGACGCTCAGCTGTaGCATAAAACATTCCATGTG +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLLDAQL*HKTFHV
Trigger: CACATGGAATGTTTTATGCCACAGCTGAGCGTCTAA...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCCCAATTTTCTACTGTTaGACTTTAAGATTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFPIFYC*TLRLSS
Trigger: GCTTGACAATCTTAAAGTCCAACAGTAGAAAATTGG...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTCCAGTTAATTGTTCATaGACCAAACTAGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SSRSFIIILALPPTKCAIPVNCS*TKLVIW
Trigger: CCAGATCACTAGTTTGGTCCATGAACAATTAACTGG...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCTTCCCTCATCGAGTTTaGGTTGTAATTCTGAATTTT +
Preference number: 4 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFFPHRV*VVILNF
Trigger: AAAATTCAGAATTACAACCCAAACTCGATGAGGGAA...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCCACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGAAAAACTCTGGCCCTTaGCATGACTTCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEKNSGP*HDFIPI
Trigger: TATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTGGATCATGGGGTACTaGGATAGATGGGAAAACATT +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKWIMGY*DRWENI
Trigger: AATGTTTTCCCATCTATCTCAGTACCCCATGATCCA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTTTTCCTAGTTTCCTTTaGAAGATCGGACCGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSFPSFL*KIGPKV
Trigger: GACTTTCGGTCCGATCTTTCAAAGGAAACTAGGAAA...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTCCTCTGGGAAAAATTaGCAGTCTAAGGTAGGAACC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMESSGKN*QSKVGT
Trigger: GGTTCCTACCTTAGACTGTCAATTTTTCCCAGAGGA...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGCAAGCAAGAAGAGATaGATCGGTGATGTAACGTGC +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIASKKR*IGDVTC
Trigger: GCACGTTACATCACCGATGCATCTCTTCTTGCTTGC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTGTATATGGCGAATTCTaGAAGAAAGGCCTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSVYGEF*KKGLSG
Trigger: ACCACTTAGGCCTTTCTTGCAGAATTCGCCATATAC...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTACCCAAAAGCCATTTaGTCCTTGTTACCTACCACT +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATYPKAI*SLLPTT
Trigger: AGTGGTAGGTAACAAGGAGCAAATGGCTTTTGGGTA...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTATTAGTAAAGGAGGATaGTACTTCCAAGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFISKGG*YFQGLF
Trigger: AAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTGGGTCAGAAATGAGGTaGAATATTACAGTAATGAGA +
Preference number: 4 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFGSEMR*NITVMR
Trigger: TCTCATTACTGTAATATTGCACCTCATTTCTGACCC...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp TATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAGCATTTGAATTGGGGTCAGAAATGAGGTaGAATATTACAGTAATGAGA +
Preference number: 4 (lower is better)
Translates to: YFWVCLWGCFRKRLAFELGSEMR*NITVMR
Trigger: TCTCATTACTGTAATATTGCACCTCATTTCTGACCC...CAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR GCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGAGTGTTAGGATGATCTaGCCCAGAAGGCATGTATTC +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWSVRMI*PRRHVF
Trigger: GAATACATGCCTTCTGGGGCAGATCATCCTAACACT...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGGGCCAAATCTGTCCTaGCATCTGTTTTTCTATGGC +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIGPNLS*HLFFYG
Trigger: GCCATAGAAAAACAGATGGCAGGACAGATTTGGCCC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGCTTCTGTCCCAGCCTTaGTGCCAACACAAGATCATA +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLLLSQP*CQHKII
Trigger: TATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAG...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCAGGTGTTGTGCTGTGTaGCTCGTATACACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSRCCAV*LVYTEE
Trigger: TTCTTCTGTGTATACGAGGCACACAGCACAACACCT...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR GCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTACTAAAAACAGGCTaGTGTGTGGGAATCCGCACA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSLLKTG*CVGIRT
Trigger: TGTGCGGATTCCCACACAGCAGCCTGTTTTTAGTAA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTCAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSEMRCNITVMRLRSFATQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTCAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTA +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFQSLQS*EKLNRL
Trigger: TAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTG...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSKSLTF*ILSSVR
Trigger: CCGAACAGATGACAATATCCAGAAGGTCAAGGACTT...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGGAGATGCTTCTGGGTaGTGGAGGAAATGCTTATTG +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIGDASG*WRKCLL
Trigger: CAATAAGCATTTCCTCCACCACCCAGAAGCATCTCC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTGAACAGCAAGGAAAATaGTCCAAGAGTCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIEQQGK*SKSPAK
Trigger: CTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTC...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGGAGAAAGTTTGCAGATaGCCAGCTCTCCTACTGACA +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWEKVCR*PALLLT
Trigger: TGTCAGTAGGAGAGCTGGCCATCTGCAAACTTTCTC...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTTTAGACGCTCAGCTGTaGCATAAAACATTCCATGTG +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQILDAQL*HKTFHV
Trigger: CACATGGAATGTTTTATGCCACAGCTGAGCGTCTAA...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGATGAGCCATCGTGCCTaGCCCACAATTTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLMSHRA*PTISTN
Trigger: ATTTGTGGAAATTGTGGGCCAGGCACGATGGCTCAT...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGACCAAACTAGTGATCTaGCCTCAATCTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWTKLVI*PQSLHC
Trigger: GCAGTGGAGAGATTGAGGCCAGATCACTAGTTTGGT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTCTACTGATGCAGGTTaGAAGCCTCATGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLSTDAG*KPHAVP
Trigger: TGGAACAGCATGAGGCTTCCAACCTGCATCAGTAGA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTGATTCACCACACCTaGCCAGTGTCATTTTCTACT +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGVIHHT*PVSFST
Trigger: AGTAGAAAATGACACTGGCCAGGTGTGGTGAATCAC...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTCCATTCCATAAATCCTaGCAGAGGCAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVPFHKS*QRQEEK
Trigger: CTTCTCTTCCTGCCTCTGCCAGGATTTATGGAATGG...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGGACCAACATAGCTTCTaGTACTCTACACTCCACCAT +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWDQHSF*YSTLHH
Trigger: ATGGTGGAGTGTAGAGTACCAGAAGCTATGTTGGTC...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp AGTTATCTCAATCAATTGTTCACTGTCAGTCACAGATaGAACTCCTCGTTCTATTCCTTCCCTCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SYLNQLFTVSHR*NSSFYSFPLSH
Trigger: GTGAGAAAGAGGGAAGGAATAGAACGAGGAGTTCAATCTGTGACTGACAGTGAACAATTGATTGAGATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
3UTR CAA 72 bp CTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTaGGCATCAGTTTTAGTGTTGCCAACACTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LPSVHSIIVGCS*ASVLVLPTLVL
Trigger: CAAAACCAGTGTTGGCAACACTAAAACTGATGCCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
3UTR CAA 72 bp TTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTaGCAGCTTGGCATCAGTTTTAGTGTTGCCAACACT +
Preference number: 4 (lower is better)
Translates to: FGTTFSSFYYCW*QLGISFSVANT
Trigger: AGTGTTGGCAACACTAAAACTGATGCCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATACACTCATTCTGGCACTaGACAACACAGGAACGTTTA +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIHSFWH*TTQERL
Trigger: TAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTG...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATTGAAATTCGTGAGATaGGAAGCTGCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENILKFVR*EAAAGF
Trigger: AAACCCAGCTGCAGCTTCTCATCTCACGAATTTCAA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCAAATAACATTTCAATaGGGACTCAGTGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSQITFQ*GLSEDQ
Trigger: CTGATCCTCACTGAGTCCTCATTGAAATGTTATTTG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTTATAGAAGTCTGTTaGCCACTGGACTATGCCCAA +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSFIEVC*PLDYAQ
Trigger: TTGGGCATAGTCCAGTGGTCAACAGACTTCTATAAA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGAAGATTGTCAAGCCTTaGTTTTGCCCACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLKIVKP*FCPHFR
Trigger: TCTAAAATGTGGGCAAAATCAAGGCTTGACAATCTT...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTGACTGGCCAATTCTGTaGAATGCTATTACCAAACCC +
Preference number: 4 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVDWPIL*NAITKP
Trigger: GGGTTTGGTAATAGCATTTCACAGAATTGGCCAGTC...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTAGTAACTGTGATGAATaGGTGTTGTGCCTCTACTAT +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQISNCDE*VLCLYY
Trigger: ATAGTAGAGGCACAACACTCATTCATCACAGTTACT...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGCCAATTGGAACCATTTaGATTCACACTCCTAATTAC +
Preference number: 4 (lower is better)
Translates to: LQKLLVGVQMENQISNWLPIGTI*IHTPNY
Trigger: GTAATTAGGAGTGTGAATTCAAATGGTTCCAATTGG...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAATCCTCACGGTTAACTaGCTGTTTGAACAAACCAAG +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGILTVN*LFEQTK
Trigger: CTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGAT...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGGCCAAATACATACTGTaGTTTCTATGCACATGGCAG +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLAKYIL*FLCTWQ
Trigger: CTGCCATGTGCATAGAAAGCACAGTATGTATTTGGC...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGAAGCTTGAGAAAGTTTaGAGATGGCCAGCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWKLEKV*RWPALL
Trigger: TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTTATTATCCTGGCTCTaGCACCAACTAAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMELLSWL*HQLNVR
Trigger: TCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAA...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLERPKW*QIKQAR
Trigger: TCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTC...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGACAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGQERPK*WQIKQA
Trigger: TGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTG...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEPLRSI*RILQER
Trigger: CCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGG...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATTAGTAGAACTCTGCTaGGAGTTACTGGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENILVELC*ELLGEL
Trigger: AAGCTCTCCCAGTAACTCCCAGCAGAGTTCTACTAA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSRLDLL*LGGVSP
Trigger: AGGAGAAACTCCACCTAACCACAATAGATCAAGCCT...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGAGGCTTGATCTATTGTaGTTAGGTGGAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMERLDLL*LGGVSP
Trigger: AGGAGAAACTCCACCTAACCACAATAGATCAAGCCT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGATCAGAATTCAGAAGATaGCAGAACCCTCCACATGTT +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGSEFRR*QNPPHV
Trigger: AACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGA...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTCAGAATTCAGAAGATaGCAGAACCCTCCACATGTT +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEISEFRR*QNPPHV
Trigger: AACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCGGTTTAGGCCTTAACTaGCAAGAGATAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSGLGLN*QEIESN
Trigger: GTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACC...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
3UTR CAA 72 bp TCAATCAATGTATGGAATGACATTAATTTACAACGGTaGAGTTCTTCCTCTTTCTATGCATGGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SINVWNDINLQR*SSSSFYAWALW
Trigger: CCAGAGAGCCCATGCATAGAAAGAGGAAGAACTCAACCGTTGTAAATTAATGTCATTCCATACATTGATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR TCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLNKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAACAAACCAAGTCCTTaGCCTTCTGGATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEINKPSP*PSGYCH
Trigger: ATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTATAGAGAAGCAGATTaGACACAAAACCTATTTCCG +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKYREAD*TQNLFP
Trigger: CGGAAATAGGTTTTGTGTTCAATCTGCTTCTCTATA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR TCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATCAATGAGGACTCAGTaGGGATCAGAATTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKISMRTQ*GSEFRR
Trigger: TCTTCTGAATTCTGATCCTCACTGAGTCCTCATTGA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGACATAGGAAACATGACTaGCTGGATCAGACAATTTTG +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGHRKHD*LDQTIL
Trigger: CAAAATTGTCTGATCCAGTCAGTCATGTTTCCTATG...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGCTTCGTGATGCTCATTaGGAAATTGCTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLLRDAH*EIALRK
Trigger: TTTTCTCAGAGCAATTTCGCAATGAGCATCACGAAG...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCAACAATGGGTTAGTGTaGACACACGGAACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSNNGLV*THGTEN
Trigger: ATTTTCTGTTCCGTGTGTGCACACTAACCCATTGTT...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTATTTTCAGAAAACCATTaGCAGTCTACACTTCTAACA +
Preference number: 4 (lower is better)
Translates to: FKVMENSKENGPRVQQRVFSENH*QSTLLT
Trigger: TGTTAGAAGTGTAGACTGGCAATGGTTTTCTGAAAA...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTTACACTGGTTCTAGATaGCAACAAAATCACATTTGC +
Preference number: 4 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSYTGSR*QQNHIC
Trigger: GCAAATGTGATTTTGTTGGCATCTAGAACCAGTGTA...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEISFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGCTTCTTTTAAAAGATaGTGGGTCTCACTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLASFKR*WVSLAD
Trigger: GTCTGCAAGTGAGACCCACCATCTTTTAAAAGAAGC...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTAAGAAAGGAAGCCTATaGTTAACCCTTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFKKGSL*LTLDEV
Trigger: TACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTT...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGGCAAAAGAGACCATATaGCCCATAAAGACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEAKETI*PIKTPL
Trigger: TAAAGGAGTCTTTATGGGCCATATGGTCTCTTTTGC...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGACAAATTCCCAGAAGTaGAATTGGAGGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWTNSQK*NWRIRG
Trigger: TCCTCTGATCCTCCAATTCCACTTCTGGGAATTTGT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAGAAATTATTCTCTATTaGGCACGTACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIEIILY*ARTPCQ
Trigger: CTGGCATGGAGTACGTGCCCAATAGAGAATAATTTC...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCTAATTACCTGCTTCTaGTTGCTGTGTCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMELITCF*LLCLNH
Trigger: ATGGTTTAGACACAGCAACCAGAAGCAGGTAATTAG...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATACATAGGAAACATGACTaGCTGGATCAGACAATTTTG +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIHRKHD*LDQTIL
Trigger: CAAAATTGTCTGATCCAGTCAGTCATGTTTCCTATG...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR TCA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTAAGACTTCATTGTCCTaGAATGGAATGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIKTSLS*NGMSRN
Trigger: GTTTCTAGACATTCCATTTCAGGACAATGAAGTCTT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR GCA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGATTAGTAAAGGAGGATaGTACTTCCAAGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLISKGG*YFQGLF
Trigger: AAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGAACAATGGGTTAGTGTaGACACACGGAACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLNNGLV*THGTEN
Trigger: ATTTTCTGTTCCGTGTGTGCACACTAACCCATTGTT...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTGCTCCTGATAGATATTaGCAAATTGCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIAPDRY*QIAFQK
Trigger: TTTCTGAAAAGCAATTTGGCAATATCTATCAGGAGC...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATCTTTTAAAAGATGGTaGGTCTCACTTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENISFKRW*VSLADL
Trigger: CAAGTCTGCAAGTGAGACCCACCATCTTTTAAAAGA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGTTCTTATTTATAAAATaGAGATGGCTGGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KPICIFTKSSILFIMSHKFLFIK*RWLVQR
Trigger: CCTTTGGACCAGCCATCTCCATTTTATAAATAAGAA...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTTCAAATGCTACCCATaGTCAAATCATTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEFKCYP*SNHFWD
Trigger: GTCCCAAAAATGATTTGACCATGGGTAGCATTTGAA...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGAGGAGGAACATTTCTTaGGGTCTTGTTTATTGTGTC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWRRNIS*GLVYCV
Trigger: GACACAATAAACAAGACCCCAAGAAATGTTCCTCCT...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGAAGAACTTTCCTATTTaGAGATGCCCAGATCATGCT +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLKNFPI*RCPDHA
Trigger: AGCATGATCTGGGCATCTCCAAATAGGAAAGTTCTT...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR TCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAAAGATTGTCAAGCCTTaGTTTTGCCCACATTTTAGA +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIKIVKP*FCPHFR
Trigger: TCTAAAATGTGGGCAAAATCAAGGCTTGACAATCTT...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCTCCTGATAGATATTaGCAAATTGCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QEQANTRREQPKVFQSYGAPDRY*QIAFQK
Trigger: TTTCTGAAAAGCAATTTGGCAATATCTATCAGGAGC...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR GCA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGTACACTGGTTCTAGATaGCAACAAAATCACATTTGC +
Preference number: 4 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWYTGSR*QQNHIC
Trigger: GCAAATGTGATTTTGTTGGCATCTAGAACCAGTGTA...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATCCAAGATGTCAACCTaGGAGGGCATATTTATTTAT +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENISKMST*EGIFIY
Trigger: ATAAATAAATATGCCCTCCCAGGTTGACATCTTGGA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGTGGTCAAATCATTTTTaGGACTACCTTCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWWSNHF*DYLQFI
Trigger: AATGAACTGAAGGTAGTCCCAAAAATGATTTGACCA...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATTCAAATGCTACCCATaGTCAAATCATTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIFKCYP*SNHFWD
Trigger: GTCCCAAAAATGATTTGACCATGGGTAGCATTTGAA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGGTTGTCGGGGTCCAAATaGAAAATCAGATATCAAATT +
Preference number: 4 (lower is better)
Translates to: NHFWDYLQFILLLLVAAWLSGSK*KIRYQI
Trigger: AATTTGATATCTGATTTTCCATTTGGACCCCGACAA...CCAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CCA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCGTGAATGGTTTGCTCTaGATAAGTCCTTTTCATTAT +
Preference number: 4 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSVNGLL*ISPFHY
Trigger: ATAATGAAAAGGACTTATCCAGAGCAAACCATTCAC...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
3UTR CAA 72 bp TATTTACACTCATTAAAGTCCCCAACCTATAGAGACTaGAAATGCCTTCTTTTTCTTCAGTTAGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: YLHSLKSPTYRD*KCLLFLQLDSV
Trigger: GACTGAGTCTAACTGAAGAAAAAGAAGGCATTTCAAGTCTCTATAGGTTGGGGACTTTAATGAGTGTAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATATCCACACATAAACAATaGTCAATAAAGGGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: ISKGGCYFQGLFGKMENISTHKQ*SIKGSY
Trigger: ATAGCTACCCTTTATTGAGCATTGTTTATGTGTGGA...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR GCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGTTTTCAGAAAACCATTaGCAGTCTACACTTCTAACA +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLFSENH*QSTLLT
Trigger: TGTTAGAAGTGTAGACTGGCAATGGTTTTCTGAAAA...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATGGTCAAATCATTTTTaGGACTACCTTCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIWSNHF*DYLQFI
Trigger: AATGAACTGAAGGTAGTCCCAAAAATGATTTGACCA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CCA 90 bp AAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGCCAATTTTCTACTGTTaGACTTTAAGATTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KSFLGLPSVHSIIVGCSLPIFYC*TLRLSS
Trigger: GCTTGACAATCTTAAAGTCCAACAGTAGAAAATTGG...CAAGCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTCCCGGCTTCACCTGCTaGCTGTCTACTCCCATAGGA +
Preference number: 5 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAPGFTC*LSTPIG
Trigger: TCCTATGGGAGTAGACAGCAAGCAGGTGAAGCCGGG...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTTGTGTACCCTGCACGTaGCAGCCTCTTCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFCVPCT*QPLPRL
Trigger: CAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACA...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCGGCTTGGGTTTGGCTTaGCTGGAGGAAGGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAGLGLA*LEEGPV
Trigger: CACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCC...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCTGCCCAAGTGAGTCCTaGGAGGGGACCCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: QALTAKQAETVSLLLGSSCPSES*EGTHWS
Trigger: GCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGCA...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS GCA 90 bp AAATCGCCTACAACCACGTCTGCATCAAACCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCACCAAGGTCGCTCCGATTCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: KSPTTTSASNQCTHI*REFASHQGRSDSAA
Trigger: GGCCGCGGAATCGGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGCGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTACCTCCTGCCTGAGCTaGGAGATGCTTCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: VTSIFSCPCTSALLALRPTSCLS*EMLLGG
Trigger: ACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGT...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CAA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCAGGCAGGAGGATCACTaGAGCCATGGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCRQEDH*SHGVGG
Trigger: GCCTCCAACTCCATGGCTCAAGTGATCCTCCTGCCT...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAAGGCAGGAGGATCACTaGAGCCATGGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GQLKGRVEHSMAMERALRRQEDH*SHGVGG
Trigger: GCCTCCAACTCCATGGCTCAAGTGATCCTCCTGCCT...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACCCAGTTCCACAAAGGTaGAGCTCTAAGGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHPVPQR*SSKVRG
Trigger: CCCTCTCACCTTAGAGCTCAACCTTTGTGGAACTGG...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGAGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: GQLKGRVEHSMAMERALRVSAET*PKPSRT
Trigger: AGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGAC...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp CTTCTACCTGATGTGCAGGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCACATGGCAGACCCTGTaGACTGGCTACCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: LLPDVQDAWYSPSLPTSCTWQTL*TGYPKA
Trigger: GGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATGT...GCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCCTGCACATCAGGTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCAGAATCACTGCTCGTaGAAAATGCATCGACCGTGC +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFQNHCS*KMHRPC
Trigger: GCACGGTCGATGCATTTTCAACGAGCAGTGATTCTG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCACATCGTGCTCCAGGGTaGGTGTCATTGCCACATCTG +
Preference number: 5 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPHRAPG*VSLPHL
Trigger: CAGATGTGGCAATGACACCAACCCTGGAGCACGATG...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTGAAAACCTGGTGAGATaGCCTGGTGCAAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFENLVR*PGAKSE
Trigger: CTCACTCTTTGCACCAGGCAATCTCACCAGGTTTTC...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GCTGAACCTTCTAGCCTGACCATTCCAAAGTGGCTGCACTCAGGTGGAGGTATGTATAGTCCCAGCATTTaGGGAGGCCTAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AEPSSLTIPKWLHSGGGMYSPSI*GGLGGQ
Trigger: CTGCCCACCTAGGCCTCCCAAAATGCTGGGACTATA...CATACCTCCACCTGAGTGCAGCCACTTTGGAATGGTCAGGCTAGAAGGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTTGCACCAGGCCCCAGTaGTTACCCTCATACATATTT +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFCTRPQ*LPSYIF
Trigger: AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCA...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCATGCACCAGGCCCCAGTaGTTACCCTCATACATATTT +
Preference number: 5 (lower is better)
Translates to: LECPASFFLTELSPAHPSCTRPQ*LPSYIF
Trigger: AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCA...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCTTGATGAAGTATACTaGCACCAGGCCCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCLDEVY*HQAPVV
Trigger: AACAACTGGGGCCTGGTGCAAGTATACTTCATCAAG...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACATCAGCCCCTCAAGGGTaGGGAAGGAGAGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTSAPQG*GRRAAL
Trigger: AAGAGCAGCTCTCCTTCCCAACCCTTGAGGGGCTGA...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGTGCCCAAGTGAGTCCTaGGAGGGGACCCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMCPSES*EGTHWS
Trigger: GCTCCAGTGGGTCCCCTCCAAGGACTCACTTGGGCA...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATCCACACAACACAGCCTaGCCTGGGTCCCCGGGTTTA +
Preference number: 5 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHPHNTA*PGSPGL
Trigger: TAAACCCGGGGACCCAGGCAAGGCTGTGTTGTGTGG...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS CCA 90 bp CAAGTCCTTGACCTTCTGGATATTGTCATCTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATCATCTCGAACATCTTCCCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QVLDLLDIVICSVGD*TPTSGIISNIFPSF
Trigger: GAAGGACGGGAAGATGTTCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTTGGAGGAAATGCTTATaGACTTCCACATCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAWRKCL*TSTSFQ
Trigger: CTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCA...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ACCTACCACTGCAGCTCCCTTGGGCCAATGAGATTTAGTAGAACTCTGCTGGGAACTCAGTCACCCCCATaGATCCCCTGCACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: TYHCSSLGPMRFSRTLLGTQSPP*IPCTFA
Trigger: TGCAAAGGTGCAGGGGATCAATGGGGGTGACTGAGT...TCCCAGCAGAGTTCTACTAAATCTCATTGGCCCAAGGGAGCTGCAGTGGTAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCACATGGCAGACCCTGTaGACTGGCTACCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELTWQTL*TGYPKA
Trigger: GGCTTTTGGGTAGCCAGTCAACAGGGTCTGCCATGT...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CAA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QALTAKQAETVSLLLGSSTVSLL*GSSQKS
Trigger: GCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGT...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCTGTGTACCCTGCACGTaGCAGCCTCTTCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPCVPCT*QPLPRL
Trigger: CAGCCTGGGAAGAGGCTGCAACGTGCAGGGTACACA...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCAAGCAACCCTTCCCCTaGATAAAGGTTTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSKQPFP*IKVCRR
Trigger: CCTTCTGCAAACCTTTATCAAGGGGAAGGGTTGCTT...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTTGGGGTCCTCCCCGTGTACATCTGTGTaGCTTGAGTGTCCCAGTATG +
Preference number: 5 (lower is better)
Translates to: QALTAKQAETVSLLLGSSPCTSV*LECPSM
Trigger: CATACTGGGACACTCAAGCAACACAGATGTACACGG...GGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS TCA 90 bp GGCCTAAGTGGTGGCAAATTAAGCAAGCAAGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGCCCTAGATCTGCAGAAACCCGCGCA +
Preference number: 5 (lower is better)
Translates to: GLSGGKLSKQEEMHR*CNVQARPRSAETRA
Trigger: TGCGCGGGTTTCTGCAGATCTAGGGCGAGCTTGCACGTTACATCACCGATGCATCTCTTCTTGCTTGCTTAATTTGCCACCACTTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS GCA 90 bp CTGGGAAAAATTAAATCGCCTACAACCACGTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAGTTTGCCAGTCACCAAGGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LGKIKSPTTTSASNQ*THICREFASHQGRS
Trigger: GGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGCGATTTAATTTTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKTSAES*PVTKVA
Trigger: AGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGT...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530460.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GGGCAGTTGAAGGGGAGGGTGGAACATAGCATGGCAATGGAAAGAGCCCTCAGATTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GQLKGRVEHSMAMERALRLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...TCTGAGGGCTCTTTCCATTGCCATGCTATGTTCCACCCTCCCCTTCAACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCAGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: LECPASFFLTELSPAHPSEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTCAACCCCTGCCTGCCTaGAACTTGGAGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCQPLPA*NLEVRA
Trigger: TGCCCTCACCTCCAAGTTCAAGGCAGGCAGGGGTTG...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGCACCTACTCAGGACCAGGCTTTGTGCAAGATGCACAGGGCAAGAGGCGCCCTCCATTGTGGGACATTaGGGTTATTTCCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GHLLRTRLCARCTGQEAPSIVGH*GYFLLF
Trigger: AAAAAGAAGGAAATAACCCAAATGTCCCACAATGGA...GGGCGCCTCTTGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGTAGGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTTCAAACACAGATCTGTaGACTCCAAATTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFSNTDL*TPNSML
Trigger: GAGCATGGAATTTGGAGTCAACAGATCTGTGTTTGA...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCTTTTCCAGTCTCCTTTaGGGGAATGAATCACTCCAT +
Preference number: 5 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCFSSLL*GNESLH
Trigger: ATGGAGTGATTCATTCCCCAAAAGGAGACTGGAAAA...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTCTGCTGGCTGGGGCTaGGGTTTGGCTTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQASAGWG*GLALLE
Trigger: CTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGCAGA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAACCGATGGTGTTAAGCTaGAGAAAGTTTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQPMVLS*RKFADG
Trigger: GCCATCTGCAAACTTTCTCAAGCTTAACACCATCGG...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCCTTCTGTCCCAGCCTaGCTGCCAACACAAGATCAT +
Preference number: 5 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGPSVPA*LPTQDH
Trigger: ATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATAACCAGTCAGGCTTCTaGCCGACTACCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHNQSGF*PTTTTL
Trigger: CAACGTGGTGGTAGTCGGCAAGAAGCCTGACTGGTT...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS CCA 90 bp CCAGTCACCAAGGTCGCTCCGATTCCGCGGCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGGCCTAAGTGGTGGCAAATTAAGCAA +
Preference number: 5 (lower is better)
Translates to: PVTKVAPIPRPLRSI*RILQERPKWWQIKQ
Trigger: TTGCTTAATTTGCCACCACTTAGGCCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGGCCGCGGAATCGGAGCGACCTTGGTGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 90 bp AGGCTGGGGAGATCCGTTCTGGGAAGCCAACAGTCGCTGCAAAGCTaGGAAAAATTAAATCGCCTACAACCACGTCTGCATCAAACCAGT +
Preference number: 5 (lower is better)
Translates to: RLGRSVLGSQQSLQS*EKLNRLQPRLHQTS
Trigger: ACTGGTTTGATGCAGACGTGGTTGTAGGCGATTTAATTTTTCCCAGCTTTGCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 90 bp GTAATTGCTTTTATGAATTTTTGTCCCTCAGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAAGCCAACAGTCGCTGCAAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VIAFMNFCPSASSRG*GDPFWEANSRCKAG
Trigger: CCCAGCTTTGCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGCTGAGGGACAAAAATTCATAAAAGCAATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 90 bp GAACAAACCAAGTCCTTGACCTTCTGGATATTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTTCGGGCATCATCTCGAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: EQTKSLTFWILSSVR*VTGRPLRASSRTSS
Trigger: GGAAGATGTTCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CCA 90 bp CTCACGGTTAACTGCCTGTTTGAACAAACCAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGGTGGGTGACTGGACGCCCACTTCGG +
Preference number: 5 (lower is better)
Translates to: LTVNCLFEQTKSLTF*ILSSVRWVTGRPLR
Trigger: CCGAAGTGGGCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTTAACCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS-3UTR CAA 90 bp GTCTCTCTGTCTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: VSLSGVPCLVLPDRAKPCVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...GCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAGACAGAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCATTGAACTCCTGGTTTaGGCTTGGCATGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: HSSLFGLWTQTGIYTIELIELLV*AWHGGS
Trigger: TGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAAT...GAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTAGATTAGCATTTGAATaGGTAGACCGAGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQARLAFE*VDRVMK
Trigger: CTTCATTACTCGGTCTACCAATTCAAATGCTAATCT...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAACTCAGTCACCCCCATaGATCCCCTGCACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: RSSLDNSTDLISFPILSSTQSPP*IPCTFA
Trigger: TGCAAAGGTGCAGGGGATCAATGGGGGTGACTGAGT...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GTCACCCCCATTGATCCCCTGCACCTTTGCAGGGCACCTACTCAGGACCAGGCTCCAACCTATAGAGACTaGAAATGCCTTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: VTPIDPLHLCRAPTQDQAPTYRD*KCLLFL
Trigger: AAGAAAAAGAAGGCATTTCAAGTCTCTATAGGTTGG...AGCCTGGTCCTGAGTAGGTGCCCTGCAAAGGTGCAGGGGATCAATGGGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCACTCTTTCCTATGGCAATaGCATTTGTCTGCAGTACAT +
Preference number: 5 (lower is better)
Translates to: GSHSHWRPTQSLAHSFHHSFLWQ*HLSAVH
Trigger: ATGTACTGCAGACAAATGCAATTGCCATAGGAAAGA...GTGATGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTTCTGCTGGCTGGGGCTaGGGTTTGGCTTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFSAGWG*GLALLE
Trigger: CTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGCAGA...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTCAGCCCCTCAAGGGTaGGGAAGGAGAGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQASAPQG*GRRAAL
Trigger: AAGAGCAGCTCTCCTTCCCAACCCTTGAGGGGCTGA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AAAAGCATGCTTCCCTGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCCCTGGCTGGATGTTTTaGAAGGAGGAAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KSMLPWAQRYRFQEILFLPGWMF*KEEAEA
Trigger: TGCCTCAGCTTCCTCCTTCAAAAACATCCAGCCAGG...GAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCAGGGAAGCATGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCTSAES*PVTKVA
Trigger: AGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGT...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGATGCTTGGTATTCCCCTTCACTGCCCACCTCCTGCCTGAGCTTGGAGATGCTGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: GCLVFPFTAHLLPELGDAVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...AGCATCTCCAAGCTCAGGCAGGAGGTGGGCAGTGAAGGGGAATACCAAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp ACTCCTCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TPRSSACGLRLEFTPLNSLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...GGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp GTGACATCCATCTTCTCCTGCCCTTGTACATCAGCACTCCTCGCTCTTCGGCCTGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: VTSIFSCPCTSALLALRPEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...AGGCCGAAGAGCGAGGAGTGCTGATGTACAAGGGCAGGAGAAGATGGATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGTCTCTGCTGAGACATaGCCCAAACCCAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPVSAET*PKPSRT
Trigger: AGTCCTGCTGGGTTTGGGCAATGTCTCAGCAGAGAC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACTTGATGAAGTATACTaGCACCAGGCCCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTLDEVY*HQAPVV
Trigger: AACAACTGGGGCCTGGTGCAAGTATACTTCATCAAG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAAAGCAACCCTTCCCCTaGATAAAGGTTTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTKQPFP*IKVCRR
Trigger: CCTTCTGCAAACCTTTATCAAGGGGAAGGGTTGCTT...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CTGGAGTGCCCTGCCTCGTTCTTCCTGACAGAGCTAAGCCCTGCCCATCCTTCACTATGGCAATTGCATTaGTCTGCAGTACATTATAGT +
Preference number: 5 (lower is better)
Translates to: LECPASFFLTELSPAHPSLWQLH*SAVHYS
Trigger: ACTATAATGTACTGCAGACAAATGCAATTGCCATAG...TGAAGGATGGGCAGGGCTTAGCTCTGTCAGGAAGAACGAGGCAGGGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GCTGGCTGGGGCTTGGGTTTGGCTTTGCTGGAGGAAGGGCCAGTGTGGGATTTTCCCAAAACACTTGATTaGTATCTTTCCTATGGCAAT +
Preference number: 5 (lower is better)
Translates to: AGWGLGLALLEEGPVWDFPKTLD*YLSYGN
Trigger: ATTGCCATAGGAAAGATACAAATCAAGTGTTTTGGG...AAAATCCCACACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCCCCAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp TTTCCTCTGCCACATGATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAACATCGTGCTCCAGGGTaGGTGTCATTGCCACATCTG +
Preference number: 5 (lower is better)
Translates to: FPLPHDASCQWRSCYLRKHRAPG*VSLPHL
Trigger: CAGATGTGGCAATGACACCAACCCTGGAGCACGATG...TTTCCGCAGATAACATGATCGCCATTGACAACTGGCATCATGTGGCAGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTTGAGCATTCCCCTTTaGGTATCTCACTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMALSIPL*VSHLIL
Trigger: GAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GAAAATACAAGTCCCTGGGGTGGCCCATGGCCATGCCTTGAGTTCAGCTGCAGCTATGGGAGCATCATTTaGGGGACAAACAATGAATTG +
Preference number: 5 (lower is better)
Translates to: ENTSPWGGPWPCLEFSCSYGSII*GTNNEL
Trigger: CAATTCATTGTTTGTCCCCAAAATGATGCTCCCATA...GCTGCAGCTGAACTCAAGGCATGGCCATGGGCCACCCCAGGGACTTGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATAAAGGTGGGCTCTTATaGAGTCACATGGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHKGGLL*SHMGPC
Trigger: GCAAGGTCCCATGTGACTCAATAAGAGCCCACCTTT...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTCCGTGTACATCTGTGTaGCTTGAGTGTCCCAGTATG +
Preference number: 5 (lower is better)
Translates to: GLLPTYDYITRACQPQCLPCTSV*LECPSM
Trigger: CATACTGGGACACTCAAGCAACACAGATGTACACGG...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGGAAGCCCATCAGCCCTaGGAGATCTTGTTCATAACC +
Preference number: 5 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKEAHQP*EILFIT
Trigger: GGTTATGAACAAGATCTCCAAGGGCTGATGGGCTTC...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS GCA 90 bp TCCCTGAAGTCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCAGCACCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLKSHKAMKDEEQNH*SLKMHRPCRPAPSW
Trigger: CCAGGAAGGTGCTGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGACTTCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531207.5
ENST00000534586.1
CDS-3UTR CAA 90 bp ATAGCTGGATGTGTGAGACTACGGGACCAGGAGCTCAAGAGGCCTAGGCAGCAAGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: IAGCVRLRDQELKRPRQQVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...TTGCTGCCTAGGCCTCTTGAGCTCCTGGTCCCGTAGTCTCACACATCCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TCGCTCTTCGGCCTGTGGACTCAGACTGGAATTTACACCATTGAACTCCTGGTTTTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: SLFGLWTQTGIYTIELLVLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...AACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp GTTGAGAACAAAGGAACAGGACAGCCACAACAAGCTAAGGTCTGGGCAGAGAAGTTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: VENKGTGQPQQAKVWAEKLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...CTTCTCTGCCCAGACCTTAGCTTGTTGTGGCTGTCCTGTTCCTTTGTTCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTACCCGGCTTCACCTGCTaGCTGTCTACTCCCATAGGA +
Preference number: 5 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLPGFTC*LSTPIG
Trigger: TCCTATGGGAGTAGACAGCAAGCAGGTGAAGCCGGG...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CAA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGAAGCTGCAGCTGGGTTaGGGGTCAGAAATGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRKLQLG*GSEMRC
Trigger: GCACCTCATTTCTGACCCCAAACCCAGCTGCAGCTT...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTAACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVTVSLL*GSSQKS
Trigger: GCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGT...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMTVSLL*GSSQKS
Trigger: GCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGT...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATCTTTCCTATGGCAATaGCATTTGTCTGCAGTACAT +
Preference number: 5 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPSFLWQ*HLSAVH
Trigger: ATGTACTGCAGACAAATGCAATTGCCATAGGAAAGA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGTTGAGTCACAGAAGGGCTCATGGAGGTAGGCTGGCTGGGCAGTATATGGCCTTCCTCTTTCTCTTCTaGAAGTTTCCGTTCTTAACA +
Preference number: 5 (lower is better)
Translates to: QLSHRRAHGGRLAGQYMAFLFLF*KFPFLT
Trigger: TGTTAAGAACGGAAACTTCAAGAAGAGAAAGAGGAA...GGCCATATACTGCCCAGCCAGCCTACCTCCATGAGCCCTTCTGTGACTCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAAACTCTTGGTGAACACTaGGATGCCAAGGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKTLGEH*DAKGSS
Trigger: GGAGGAACCCTTGGCATCCAAGTGTTCACCAAGAGT...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp AATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACAGTTTCCATATTTAGGACATGAGTaGGGAAAACCTGGTGAGATT +
Preference number: 5 (lower is better)
Translates to: NWVTFTLAPNTEPGPQFPYLGHE*GKPGEI
Trigger: AATCTCACCAGGTTTTCCCAACTCATGTCCTAAATA...TGGAAACTGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHSQTES*TDGVKL
Trigger: AAGCTTAACACCATCGGTCAATGACTCCGTTTGGCT...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAAGAGTCACATGGGACCTaGCTGAGACCCAATCCCAAC +
Preference number: 5 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQESHGT*LRPNPN
Trigger: GTTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTC...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTATTGAACTCCTGGTTTaGGCTTGGCATGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCIELLV*AWHGGS
Trigger: TGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAAT...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAACTCAGGACCAGGCTTaGTGCAAGATGCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLTQDQA*CKMHRA
Trigger: TGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGT...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529331.2
CDS-3UTR CAA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGCTGCCTGCCTTGAACTaGGAGGTGAGGGCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: KPICIFTKSSILFIMSHKLPALN*EVRAGC
Trigger: ACACCCTGCCCTCACCTCCAAGTTCAAGGCAGGCAG...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTCTGCCTGCCTTGAACTaGGAGGTGAGGGCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GSEMRCNITVMRLRSFATLPALN*EVRAGC
Trigger: ACACCCTGCCCTCACCTCCAAGTTCAAGGCAGGCAG...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGC +
Preference number: 5 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKQNHCS*KMHRPC
Trigger: GCACGGTCGATGCATTTTCAACGAGCAGTGATTCTG...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTGGCTTGGGTTTGGCTTaGCTGGAGGAAGGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFGLGLA*LEEGPV
Trigger: CACTGGCCCTTCCTCCAGCAAAGCCAAACCCAAGCC...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACACCAGGGTTGGTGTCATaGCCACATCTGATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTPGLVS*PHLIKL
Trigger: CAGCTTGATCAGATGTGGCAATGACACCAACCCTGG...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp TTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCGTACCGATGGTGTTAAGCTaGAGAAAGTTTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: LFSIEHVLHARCCAVCLVPMVLS*RKFADG
Trigger: GCCATCTGCAAACTTTCTCAAGCTTAACACCATCGG...TACGAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AGTTCAAGGTCCTTCATTATTATCCTGGCTCTGCCACCAACTAAATGTGCGATTGAGTCACATGGGACCTaGCTGAGACCCAATCCCAAC +
Preference number: 5 (lower is better)
Translates to: SSRSFIIILALPPTKCAIESHGT*LRPNPN
Trigger: GTTGGGATTGGGTCTCAGCAAGGTCCCATGTGACTC...AATCGCACATTTAGTTGGTGGCAGAGCCAGGATAATAATGAAGGACCTTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCAGACAGAGTTTGAACTaGCAGAAACTGCTTGTCGGG +
Preference number: 5 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILRQSLN*QKLLVG
Trigger: CCCGACAAGCAGTTTCTGCAAGTTCAAACTCTGTCT...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp GGTGGAGTTTCTCCTGCCAGGGAAAATACAGTTGCTAGGAGAATGGGCTTTGGAGATCATGCTCTACCCTaGGGTTTAGAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GGVSPARENTVARRMGFGDHALP*GLEILS
Trigger: GCTCAGAATTTCTAAACCCAAGGGTAGAGCATGATC...TCCAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGGCAGGAGAAACTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCCCAGGGAAAATACAGTaGCTAGGAGAATGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILPGKIQ*LGEWAL
Trigger: CAAAGCCCATTCTCCTAGCAACTGTATTTTCCCTGG...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS GCA 90 bp TCCCTGAAGTCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCCTTCAAAACACCC +
Preference number: 5 (lower is better)
Translates to: SLKSHKAMKDEEQNH*SLKMHRPCRPFKTP
Trigger: GGGTGTTTTGAAGGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGACTTCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667240.1
CDS CCA 90 bp ACGCAAGGTTTATTCTGGATGCAGGGAACATGGAACAATCAGATGTaGGCTTGGCTTTTAGGAGGTCCTGGGCTAGTAGAGAAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: TQGLFWMQGTWNNQM*AWLLGGPGLVEKKN
Trigger: GTTTTTCTTCTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACCTTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS-3UTR CAA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGACCTCCTGCCTGAGCTaGGAGATGCTTCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: KPICIFTKSSILFIMSHKTSCLS*EMLLGG
Trigger: ACCACCCAGAAGCATCTCCAAGCTCAGGCAGGAGGT...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp TACGTGAGCAGCCAAAGAAGGTGCCTAACAGTGAGGCAGCATCCTAGTTCTGGTCAGTTCATTCTATTATaGTTGGTTGCAGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: YVSSQRRCLTVRQHPSSGQFILL*LVAAWH
Trigger: ATGCCAAGCTGCAACCAACAATAATAGAATGAACTG...ACCAGAACTAGGATGCTGCCTCACTGTTAGGCACCTTCTTTGGCTGCTCACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTATGGGAGGAGGTAGACTaGGCACATCGAAAGCCACTG +
Preference number: 5 (lower is better)
Translates to: FKVMENSKENGPRVQQRVWEEVD*AHRKPL
Trigger: CAGTGGCTTTCGATGTGCCAAGTCTACCTCCTCCCA...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GTCCTTTTCCCTTCTGTCCCAGCCTTGCTGCCAACACAAGATCATATAGCCTCTTGTTTAGGCACCACCTaGATTAATCTGCCATATAGG +
Preference number: 5 (lower is better)
Translates to: VLFPSVPALLPTQDHIASCLGTT*INLPYR
Trigger: CCTATATGGCAGATTAATCAAGGTGGTGCCTAAACA...AGAGGCTATATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGGGAAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCACACCCCAGAGAAATTaGGTAAAACCCTCTGCACCA +
Preference number: 5 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFTPQRN*VKPSAP
Trigger: TGGTGCAGAGGGTTTTACCAAATTTCTCTGGGGTGT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTAGCTCTGTCGCCAGGTaGGAGTACAGTGGCGCAATC +
Preference number: 5 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQISSVAR*EYSGAI
Trigger: GATTGCGCCACTGTACTCCAACCTGGCGACAGAGCT...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAACTTGCAGAAACTGCTaGTCGGGGTCCAAATGGAAA +
Preference number: 5 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLTCRNC*SGSKWK
Trigger: TTTCCATTTGGACCCCGACAAGCAGTTTCTGCAAGT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAACTAGTGGTGGGGACTTaGTTCCTAAAGTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQLVVGT*FLKCSV
Trigger: GACACTGCACTTTAGGAACAAAGTCCCCACCACTAG...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS CCA 90 bp GGTTTATTCTGGATGCAGGGAACATGGAACAATCAGATGTGGGCTTaGCTTTTAGGAGGTCCTGGGCTAGTAGAGAAGAAAAACATCCTT +
Preference number: 5 (lower is better)
Translates to: GLFWMQGTWNNQMWA*LLGGPGLVEKKNIL
Trigger: AAGGATGTTTTTCTTCTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: GSEMRCNITVMRLRSFATTSAES*PVTKVA
Trigger: AGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFTSAES*PVTKVA
Trigger: AGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGT...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GTGGCTGCACTCAGGTGGAGGTATGACTCTAGCACACAGTTATTGAACCTCCTCATTACAGTAATGAGATaGAGGTCTTTTGCAACTTGC +
Preference number: 5 (lower is better)
Translates to: VAALRWRYDSSTQLLNLLITVMR*RSFATC
Trigger: GCAAGTTGCAAAAGACCTCAATCTCATTACTGTAAT...GAGGAGGTTCAATAACTGTGTGCTAGAGTCATACCTCCACCTGAGTGCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp AAGTTTAAATTGGGTCACATTCACACTGGCGCCCAACACAGAGCCTGGCCCACACTATGGCAATTGCATTaGTCTGCAGTACATTATAGT +
Preference number: 5 (lower is better)
Translates to: KFKLGHIHTGAQHRAWPTLWQLH*SAVHYS
Trigger: ACTATAATGTACTGCAGACAAATGCAATTGCCATAG...TGTGGGCCAGGCTCTGTGTTGGGCGCCAGTGTGAATGTGACCCAATTTAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GGAGCCTCATTAGTCATGTCAGATGACATAGTTAACACTTGGGGCCAGTACAGCTTTTCCAGTCTCCTTTaGGGGAATGAATCACTCCAT +
Preference number: 5 (lower is better)
Translates to: GASLVMSDDIVNTWGQYSFSSLL*GNESLH
Trigger: ATGGAGTGATTCATTCCCCAAAAGGAGACTGGAAAA...GCTGTACTGGCCCCAAGTGTTAACTATGTCATCTGACATGACTAATGAGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCAGATCTCAGCACCAGTaGCAAGGTGCAAATACACAT +
Preference number: 5 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFRSQHQ*QGANTH
Trigger: ATGTGTATTTGCACCTTGCAACTGGTGCTGAGATCT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS GCA 90 bp TCCCTGAAGTCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCTTTTTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SLKSHKAMKDEEQNH*SLKMHRPCRPFSSN
Trigger: GTTTGAGGAAAAAGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGACTTCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp CGCTCCAGCCTGGACAACAGTACTGATCTGATCTCCTTCCCTATTCTTTCTTCAGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: RSSLDNSTDLISFPILSSVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...TGAAGAAAGAATAGGGAAGGAGATCAGATCAGTACTGTTGTCCAGGCTGGAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp ATCTCCTTCCCTATTCTTTCTTCATCAAGCCCACTTGGACCTCATGTGACTCCAGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: ISFPILSSSSPLGPHVTPEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...TGGAGTCACATGAGGTCCAAGTGGGCTTGATGAAGAAAGAATAGGGAAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp AATGGAGAGAAGGCAGAGATACTGAGCTACCTTTTAGATGCCTGGATGTCCTGTTGGAGGAAATGCTTATaGACTTCCACATCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: NGEKAEILSYLLDAWMSCWRKCL*TSTSFQ
Trigger: CTGGAAAGATGTGGAAGTCAATAAGCATTTCCTCCA...ACAGGACATCCAGGCATCTAAAAGGTAGCTCAGTATCTCTGCCTTCTCTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGTATAGTCCCAGCATTTaGGGAGGCCTAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLYSPSI*GGLGGQ
Trigger: CTGCCCACCTAGGCCTCCCAAAATGCTGGGACTATA...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ATCTGTGGATCCATATTCCAGAGATTTCAGCCAGTGCTCCTTAGGGGGATGAAATCAAACACAGATCTGTaGACTCCAAATTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: ICGSIFQRFQPVLLRGMKSNTDL*TPNSML
Trigger: GAGCATGGAATTTGGAGTCAACAGATCTGTGTTTGA...TTTCATCCCCCTAAGGAGCACTGGCTGAAATCTCTGGAATATGGATCCACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTTGATCCCTGTTCATTaGTTTTTGCTTCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQALIPVH*FLLLLA
Trigger: AGCCAGCAGAAGCAAAAACAAATGAACAGGGATCAA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GGGATGAAAACTGGAATAATAACTAACACGTGCAGAGGCTCTTACTTACACTTTCCAGGGTTGGTGTCATaGCCACATCTGATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GMKTGIITNTCRGSYLHFPGLVS*PHLIKL
Trigger: CAGCTTGATCAGATGTGGCAATGACACCAACCCTGG...AAAGTGTAAGTAAGAGCCTCTGCACGTGTTAGTTATTATTCCAGTTTTCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AGAGCTAAGCCCTGCCCATCCTTCAGTACCACTTCGTTGATGAACCTTTTTCCATTGAGCATTCCCCTTTaGGTATCTCACTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: RAKPCPSFSTTSLMNLFPLSIPL*VSHLIL
Trigger: GAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAA...TGGAAAAAGGTTCATCAACGAAGTGGTACTGAAGGATGGGCAGGGCTTAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp TGGGCACAGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATTTCTATTATTGTTGGTaGCAGCTTGGCATCAGTTTT +
Preference number: 5 (lower is better)
Translates to: WAQRYRFQEILFLSSHWHFYYCW*QLGISF
Trigger: AAAACTGATGCCAAGCTGCAACCAACAATAATAGAA...ATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCTGTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCCTTTTCAGAAAACCATaGCCAGTCTACACTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILLFRKP*PVYTSN
Trigger: GTTAGAAGTGTAGACTGGCAATGGTTTTCTGAAAAG...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTTGGGAGGAGGTAGACTaGGCACATCGAAAGCCACTG +
Preference number: 5 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIWEEVD*AHRKPL
Trigger: CAGTGGCTTTCGATGTGCCAAGTCTACCTCCTCCCA...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAAGAAATTATTCTCTATaGGGCACGTACTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLRNYSL*GTYSMP
Trigger: TGGCATGGAGTACGTGCCCAATAGAGAATAATTTCT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AAATTATTCTCTATTGAGCACGTACTCCATGCCAGGTGTTGTGCTGTGTGCCTCCTAATACTGCAAACTTaGCTCAGTGCTCCAGCATTT +
Preference number: 5 (lower is better)
Translates to: KLFSIEHVLHARCCAVCLLILQT*LSAPAF
Trigger: AAATGCTGGAGCACTGAGCAAAGTTTGCAGTATTAG...GAGGCACACAGCACAACACCTGGCATGGAGTACGTGCTCAATAGAGAATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp GGTCTTTTACCGACCTACGACTACATCACAAGAGCATGCCAGCCACAGTGTCTTAACATAACACACTACTaGGGAAGAACATCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GLLPTYDYITRACQPQCLNITHY*GRTSGK
Trigger: TTTTCCAGATGTTCTTCCCAAGTAGTGTGTTATGTT...AAGACACTGTGGCTGGCATGCTCTTGTGATGTAGTCGTAGGTCGGTAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATGAGGAGGGCCATGCCAAATGTGAATGGTTaGCTCTGGATAAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: NSKENGPRVQQRVMRRAMPNVNG*LWISPF
Trigger: AAAAGGACTTATCCAGAGCAAACCATTCACATTTGG...CATGGCCCTCCTCATTACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTACTAGGAGAATGGGCTTaGGATGTTATAACTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLLGEWA*DVITLK
Trigger: CTTCAGAGTTATAACATCCAAAGCCCATTCTCCTAG...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCT +
Preference number: 5 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKITSAES*PVTKVA
Trigger: AGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGT...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp AAGCCCATTTGTATCTTTACCAAGTCCAGCATCCTTTTCATAATGTCTCACAAGATTGAACTCCTGGTTTaGGCTTGGCATGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: KPICIFTKSSILFIMSHKIELLV*AWHGGS
Trigger: TGAGCCACCATGCCAAGCCAAAACCAGGAGTTCAAT...CTTGTGAGACATTATGAAAAGGATGCTGGACTTGGTAAAGATACAAATGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAACTCAGGACCAGGCTTaGTGCAAGATGCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: ISKGGCYFQGLFGKMENITQDQA*CKMHRA
Trigger: TGCCCTGTGCATCTTGCACAAAGCCTGGTCCTGAGT...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp TCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTGTCTGGAGTGCCCTTGCATCTAATGGTATaGTTGATCCCTGTTCATTTG +
Preference number: 5 (lower is better)
Translates to: SFPDFIHLPMLVSLSGVPLHLMV*LIPVHL
Trigger: CAAATGAACAGGGATCAACAATACCATTAGATGCAA...GGGCACTCCAGACAGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CCCTTGATGAAGTATACTTGCACCAGGCCCCAGTTGTTACCCTCATACATATTTGGGACAAACAATGAATaGTCCCATAGAGTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: PLMKYTCTRPQLLPSYIFGTNNE*SHRVRS
Trigger: ACTTCTCACTCTATGGGACAATTCATTGTTTGTCCC...AAATATGTATGAGGGTAACAACTGGGGCCTGGTGCAAGTATACTTCATCAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS-3UTR CAA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: FKVMENSKENGPRVQQRVARLDL*WLGGVS
Trigger: AGAAACTCCACCTAACCACAATAGATCAAGCCTGGC...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AGAGATACAGATTCCAGGAGATCCTGTTCCTCTCTTCTCACTGGCATGATCCTCTTCTATTATTGTTGGTaGCAGCTTGGCATCAGTTTT +
Preference number: 5 (lower is better)
Translates to: RDTDSRRSCSSLLTGMILFYYCW*QLGISF
Trigger: AAAACTGATGCCAAGCTGCAACCAACAATAATAGAA...GAGGATCATGCCAGTGAGAAGAGAGGAACAGGATCTCCTGGAATCTGTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGTCTACACTTCTAACATaGCCAGTGTGTTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMSTLLT*PVCFSA
Trigger: GGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGA...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp ATCAGAATTCAGAAGATGGCAGAACCCTCCACATGTTTTTCTAAGTCACAGATTGTACATCTGTGTTGCTaGAGTGTCCCAGTATGGGAG +
Preference number: 5 (lower is better)
Translates to: IRIQKMAEPSTCFSKSQIVHLCC*SVPVWE
Trigger: CTCCCATACTGGGACACTCAAGCAACACAGATGTAC...AATCTGTGACTTAGAAAAACATGTGGAGGGTTCTGCCATCTTCTGAATTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GTGGCAACAGTCATACCTATTTCCAGGTATGCAGTTAACAATGGGTTAGTGTGCGAGGAGGAACATTTCTaGGGGTCTTGTTTATTGTGT +
Preference number: 5 (lower is better)
Translates to: VATVIPISRYAVNNGLVCEEEHF*GSCLLC
Trigger: ACACAATAAACAAGACCCCAAGAAATGTTCCTCCTC...GCACACTAACCCATTGTTAACTGCATACCTGGAAATAGGTATGACTGTTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp TCATTGACCGATGGTGTTAAGCTTGAGAAAGTTTGCAGATGGCCAGCTCTCCTAAGAAATTATTCTCTATaGAGCACGTACTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: SLTDGVKLEKVCRWPALLRNYSL*STYSMP
Trigger: TGGCATGGAGTACGTGCTCAATAGAGAATAATTTCT...TAGGAGAGCTGGCCATCTGCAAACTTTCTCAAGCTTAACACCATCGGTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTATTCATAACCTCCACATaGTCAATGCCCAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: FKVMENSKENGPRVQQRVFITST*SMPSSV
Trigger: GACACTGCTGGGCATTGACAATGTGGAGGTTATGAA...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp AGGTCAATACAAGGATCAGCACACCAAAGTGACCAAAAGCAGCTACTGAAGATGTCTATGTGGTATTACTaGGAACCCACTTGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: RSIQGSAHQSDQKQLLKMSMWYY*EPTWEK
Trigger: CTTTTCCCAAGTGGGTTCCAAGTAATACCACATAGA...CATCTTCAGTAGCTGCTTTTGGTCACTTTGGTGTGCTGATCCTTGTATTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTAGTCAGGAGAAACACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVSQEKH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGTTTCTCCTGACT...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp CAACCAAACTTAGAGTTATCCTCTTCCAAGATGTCAACCTGGGAGGGCATATTTACCAAAGGAGCACCTTaGGAATTCTTATTATGCCAG +
Preference number: 5 (lower is better)
Translates to: QPNLELSSSKMSTWEGIFTKGAP*EFLLCQ
Trigger: CTGGCATAATAAGAATTCCAAAGGTGCTCCTTTGGT...AAATATGCCCTCCCAGGTTGACATCTTGGAAGAGGATAACTCTAAGTTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGGAGGTCTTTTGCAACTaGCAAAGAGTCCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLEVFCN*QRVPEE
Trigger: CTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCTC...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCCCCAAAACACTTGATTaGTATCTTTCCTATGGCAAT +
Preference number: 5 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAPKTLD*YLSYGN
Trigger: ATTGCCATAGGAAAGATACAAATCAAGTGTTTTGGG...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp GGAGAGCTGCTCTTTATTGAGCATTCCCCTTTTGGTATCTCACTTAATTCTCACTTGATCCCTGTTCATTaGTTTTTGCTTCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GELLFIEHSPFGISLNSHLIPVH*FLLLLA
Trigger: AGCCAGCAGAAGCAAAAACAAATGAACAGGGATCAA...GTGAGAATTAAGTGAGATACCAAAAGGGGAATGCTCAATAAAGAGCAGCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp TTTAGATCACCATTCCTTTCCAGATTTCATACATTTGCCTATGCTGGTCTCTCTCTTAAGTTAAGTTCCTaGCCATCGTGCTCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FRSPFLSRFHTFAYAGLSLKLSS*PSCSRV
Trigger: AACCCTGGAGCACGATGGCAAGGAACTTAACTTAAG...AGAGAGACCAGCATAGGCAAATGTATGAAATCTGGAAAGGAATGGTGATCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AGGAAGAAAGGAAGCCTATGGTTAACCCTTGATGAAGTATACTTGCACCAGGCCTTCCTCTTTCTCTTCTaGAAGTTTCCGTTCTTAACA +
Preference number: 5 (lower is better)
Translates to: RKKGSLWLTLDEVYLHQAFLFLF*KFPFLT
Trigger: TGTTAAGAACGGAAACTTCAAGAAGAGAAAGAGGAA...GGCCTGGTGCAAGTATACTTCATCAAGGGTTAACCATAGGCTTCCTTTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTGCCAGGCTTGATCTATaGTGGTTAGGTGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSARLDL*WLGGVS
Trigger: AGAAACTCCACCTAACCACAATAGATCAAGCCTGGC...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCATTTCCACAAATAAATaGTCAGACACTGCCAGATCA +
Preference number: 5 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFISTNK*SDTARS
Trigger: TGATCTGGCAGTGTCTGACAATTTATTTGTGGAAAT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AGGGGTGATACCCAAATGAGTGGAGGTCCAAAGCATAGGACTAGAATGAAACAACTTTTCAGAAAACCATaGCCAGTCTACACTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RGDTQMSGGPKHRTRMKQLFRKP*PVYTSN
Trigger: GTTAGAAGTGTAGACTGGCAATGGTTTTCTGAAAAG...TTGTTTCATTCTAGTCCTATGCTTTGGACCTCCACTCATTTGGGTATCACCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp ATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTCTACTACAACTTTGGCCTTCTGTCCCAGCCTaGCTGCCAACACAAGATCAT +
Preference number: 5 (lower is better)
Translates to: IRQFCNGLFNAEILLQLWPSVPA*LPTQDH
Trigger: ATGATCTTGTGTTGGCAGCAAGGCTGGGACAGAAGG...CCAAAGTTGTAGTAGAATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GAAACAGGTTTAGGCCTTAACTGGCAAGAGATAGAAAGCAACCAGTCAGGCTTCACATTTCTTGGGGTCTaGTTTATTGTGTCTAGAACA +
Preference number: 5 (lower is better)
Translates to: ETGLGLNWQEIESNQSGFTFLGV*FIVSRT
Trigger: TGTTCTAGACACAATAAACAAGACCCCAAGAAATGT...GAAGCCTGACTGGTTGCTTTCTATCTCTTGCCAGTTAAGGCCTAAACCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS CCA 90 bp TCATCTATCAAACATTTATTGAGCAGTTCCACGCAAGGTTTATTCTaGATGCAGGGAACATGGAACAATCAGATGTGGGCTTGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: SSIKHLLSSSTQGLF*MQGTWNNQMWAWLL
Trigger: TAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACCTTGCGTGGAACTGCTCAATAAATGTTTGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS-3UTR CAA 90 bp GTCAAATCATTTTTGGGACTACCTTCAGTTCATTCTATTATTGTTGGTTGCAGCTTGACCTTCTGGATATaGTCATCTGTTCGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: VKSFLGLPSVHSIIVGCSLTFWI*SSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAA...GCTGCAACCAACAATAATAGAATGAACTGAAGGTAGTCCCAAAAATGATTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp CAGCTGGGTTTGGGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGATTTTATATGTTCACTaGACTGGATCATGGGGTACT +
Preference number: 5 (lower is better)
Translates to: QLGLGSEMRCNITVMRLRILYVH*TGSWGT
Trigger: AGTACCCCATGATCCAGTCAAGTGAACATATAAAAT...CCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCCCAAACCCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GGATCATGGGGTACTGAGATAGATGGGAAAACATTATTTCTGGGTGTGTCTGTGATTTTATATGTTCACTaGACTGGATCATGGGGTACT +
Preference number: 5 (lower is better)
Translates to: GSWGTEIDGKTLFLGVSVILYVH*TGSWGT
Trigger: AGTACCCCATGATCCAGTCAAGTGAACATATAAAAT...CACAGACACACCCAGAAATAATGTTTTCCCATCTATCTCAGTACCCCATGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp ATTAGTAAAGGAGGATGCTACTTCCAAGGACTGTTTGGGAAAATGGAAAATATAGAGGTCTTTTGCAACTaGCAAAGAGTCCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ISKGGCYFQGLFGKMENIEVFCN*QRVPEE
Trigger: CTCCTCTGGGACTCTTTGCAAGTTGCAAAAGACCTC...TATATTTTCCATTTTCCCAAACAGTCCTTGGAAGTAGCATCCTCCTTTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp ATGCCAGTTGTCAATGGCGATCATGTTATCTGCGGAAAGTCCCTTTACATGACATTGCATCTAATGGTATaGTTGATCCCTGTTCATTTG +
Preference number: 5 (lower is better)
Translates to: MPVVNGDHVICGKSLYMTLHLMV*LIPVHL
Trigger: CAAATGAACAGGGATCAACAATACCATTAGATGCAA...TGTCATGTAAAGGGACTTTCCGCAGATAACATGATCGCCATTGACAACTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000662483.1
ENST00000667240.1
CDS-3UTR CAA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGAGCCAAACGGAGTCATaGACCGATGGTGTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMESQTES*TDGVKL
Trigger: AAGCTTAACACCATCGGTCAATGACTCCGTTTGGCT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTAGATCTCAGCACCAGTaGCAAGGTGCAAATACACAT +
Preference number: 5 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSRSQHQ*QGANTH
Trigger: ATGTGTATTTGCACCTTGCAACTGGTGCTGAGATCT...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGAGGCCTGTGTCTATTTaGTACACTGCTGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMERPVSI*YTAVSR
Trigger: CCGAGATACAGCAGTGTACAAAATAGACACAGGCCT...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAAGGCCTGTGTCTATTTaGTACACTGCTGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: QEQANTRREQPKVFQSYGRPVSI*YTAVSR
Trigger: CCGAGATACAGCAGTGTACAAAATAGACACAGGCCT...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTGTACATCTGTGTTGCTaGAGTGTCCCAGTATGGGAG +
Preference number: 5 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVVHLCC*SVPVWE
Trigger: CTCCCATACTGGGACACTCAAGCAACACAGATGTAC...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTTTACACACTAAATCCTaGTGTACAGAGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSLHTKS*CTELQA
Trigger: AGCCTGGAGCTCTGTACACAAGGATTTAGTGTGTAA...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGACAGCCCTTGGAGATCTaGTTCATAACCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: QEQANTRREQPKVFQSYGQPLEI*FITSTL
Trigger: CAATGTGGAGGTTATGAACAAGATCTCCAAGGGCTG...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp TTGCAGAAACTGCTTGTCGGGGTCCAAATGGAAAATCAGATATCAAATTGGTTGGCAAATTATCCCAAATaGTTCATCTGCTGCAACACC +
Preference number: 5 (lower is better)
Translates to: LQKLLVGVQMENQISNWLANYPK*FICCNT
Trigger: GGTGTTGCAGCAGATGAACAATTTGGGATAATTTGC...CAACCAATTTGATATCTGATTTTCCATTTGGACCCCGACAAGCAGTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663165.1
CDS-3UTR CAA 90 bp ATGGGAAAACATTATTTCTGGGTGTGTCTGTGGGGATGTTTCCGGAAGAGATTAATTTTATATGTTCACTaGACTGGATCATGGGGTACT +
Preference number: 5 (lower is better)
Translates to: MGKHYFWVCLWGCFRKRLILYVH*TGSWGT
Trigger: AGTACCCCATGATCCAGTCAAGTGAACATATAAAAT...TAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAATGTTTTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000529331.2
ENST00000530460.2
CDS-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTACCAAAGGAGCACCTTaGGAATTCTTATTATGCCAG +
Preference number: 5 (lower is better)
Translates to: GSEMRCNITVMRLRSFATTKGAP*EFLLCQ
Trigger: CTGGCATAATAAGAATTCCAAAGGTGCTCCTTTGGT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp CAGTCTACACTTCTAACATTGCCAGTGTGTTTTTCTGCCAATATAGATCTGTCTCCAACTACCCAGAGTTaGCATATCCTTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: QSTLLTLPVCFSANIDLSPTTQS*HILSIF
Trigger: AAAGATGGAAAGGATATGCAAACTCTGGGTAGTTGG...AGACAGATCTATATTGGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGCAACTAGGACAGTATTaGCAAGGATCTGATAAGGGA +
Preference number: 5 (lower is better)
Translates to: KNKQIPEGNSQKFFKVMEQLGQY*QGSDKG
Trigger: TCCCTTATCAGATCCTTGCAAATACTGTCCTAGTTG...CTCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTATTGTTGGTTGCAGCTaGGCATCAGTTTTAGTGTTG +
Preference number: 5 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIIVGCS*ASVLVL
Trigger: CAACACTAAAACTGATGCCAAGCTGCAACCAACAAT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGACCAACTACCCAGAGTTaGCATATCCTTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: QEQANTRREQPKVFQSYGPTTQS*HILSIF
Trigger: AAAGATGGAAAGGATATGCAAACTCTGGGTAGTTGG...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp TTCAAAGTTATGGAGAACAGCAAGGAAAATGGTCCAAGAGTCCAGCAAAGAGTAATTCCCTCATCGAGTTaGGGTTGTAATTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: FKVMENSKENGPRVQQRVIPSSS*GCNSEF
Trigger: AAATTCAGAATTACAACCCAAACTCGATGAGGGAAT...TACTCTTTGCTGGACTCTTGGACCATTTTCCTTGCTGTTCTCCATAACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAGTCTCACTTGCAGACTaGTTCAATTTCACGCAAAAT +
Preference number: 5 (lower is better)
Translates to: QEQANTRREQPKVFQSYGVSLAD*FNFTQN
Trigger: ATTTTGCGTGAAATTGAACAAGTCTGCAAGTGAGAC...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCA +
Preference number: 5 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVEQTKS*TFWILS
Trigger: TGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTC...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GGGTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTAGATTAGCATTTGAATaGGTAGACCGAGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: GSEMRCNITVMRLRSFATRLAFE*VDRVMK
Trigger: CTTCATTACTCGGTCTACCAATTCAAATGCTAATCT...AGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTCAACTAGGACAGTATTaGCAAGGATCTGATAAGGGA +
Preference number: 5 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVQLGQY*QGSDKG
Trigger: TCCCTTATCAGATCCTTGCAAATACTGTCCTAGTTG...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATAATTGTTGGTTGCAGCTaGGCATCAGTTTTAGTGTTG +
Preference number: 5 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIIVGCS*ASVLVL
Trigger: CAACACTAAAACTGATGCCAAGCTGCAACCAACAAT...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATCTACACTTCTAACATaGCCAGTGTGTTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKISTLLT*PVCFSA
Trigger: GGCAGAAAAACACACTGGCAATGTTAGAAGTGTAGA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GTCAGAAATGAGGTGCAATATTACAGTAATGAGATTGAGGTCTTTTGCAACTTGTCCATTGTGGGACATTaGGGTTATTTCCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VRNEVQYYSNEIEVFCNLSIVGH*GYFLLF
Trigger: AAAAAGAAGGAAATAACCCAAATGTCCCACAATGGA...CAAGTTGCAAAAGACCTCAATCTCATTACTGTAATATTGCACCTCATTTCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321844.6
ENST00000529331.2
CDS-3UTR CAA 90 bp CAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTATGGAATTTCCACAAATAAATaGTCAGACACTGCCAGATCA +
Preference number: 5 (lower is better)
Translates to: QEQANTRREQPKVFQSYGISTNK*SDTARS
Trigger: TGATCTGGCAGTGTCTGACAATTTATTTGTGGAAAT...TCCATAACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATACAGTTCATTCTATTATaGTTGGTTGCAGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKIQFILL*LVAAWH
Trigger: ATGCCAAGCTGCAACCAACAATAATAGAATGAACTG...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607673.2
ENST00000663165.1
CDS-3UTR CAA 90 bp GATAAGGGAGACACTGTAGAACATAAATACATGATGGTTACCTCAGAAAAGATATTGGGGTCTTGTTTATaGTGTCTAGAACAGCATCAT +
Preference number: 5 (lower is better)
Translates to: DKGDTVEHKYMMVTSEKILGSCL*CLEQHH
Trigger: ATGATGCTGTTCTAGACACAATAAACAAGACCCCAA...TATCTTTTCTGAGGTAACCATCATGTATTTATGTTCTACAGTGTCTCCCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp AACATGACTGACTGGATCAGACAATTTTGTAATGGACTGTTCAATGCTGAGATTATTCTTTACAAAAGTTaGTTCCTTAGCTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NMTDWIRQFCNGLFNAEIILYKS*FLSSVL
Trigger: GAGGACAGAGCTAAGGAACAAACTTTTGTAAAGAAT...AATCTCAGCATTGAACAGTCCATTACAAAATTGTCTGATCCAGTCAGTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS-3UTR CAA 90 bp GAAATCAAGAACAAGCAAATACCAGAAGGGAACAGCCAAAAGTTTTTCAAAGTTAGATTAGCATTTGAATaGGTAGACCGAGTAATGAAG +
Preference number: 5 (lower is better)
Translates to: EIKNKQIPEGNSQKFFKVRLAFE*VDRVMK
Trigger: CTTCATTACTCGGTCTACCAATTCAAATGCTAATCT...AACTTTGAAAAACTTTTGGCTGTTCCCTTCTGGTATTTGCTTGTTCTTGATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530460.2
CDS GCA 72 bp AGTGAGGTTCCGTCTCGGAGCAGCCCAGGAACCGCCTaGTCTAGCGTCCCGGGAGACAGGCGCGCATGCGCA +
Preference number: 6 (lower is better)
Translates to: SEVPSRSSPGTA*SSVPGDRRACA
Trigger: TGCGCATGCGCGCCTGTCTCCCGGGACGCTAGAGCAGGCGGTTCCTGGGCTGCTCCGAGACGGAACCTCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531207.5
CDS CCA 72 bp ACGCCTGCAGAAGCTGACTGGCAGAGTAGTGGACTCTaGGATGGGATACCGGCAGGGGCATTTCCCCACCAG +
Preference number: 6 (lower is better)
Translates to: TPAEADWQSSGL*DGIPAGAFPHQ
Trigger: CTGGTGGGGAAATGCCCCTGCCGGTATCCCATCCCAGAGTCCACTACTCTGCCAGTCAGCTTCTGCAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530460.2
ENST00000607673.2
ENST00000663165.1
CDS CAA 72 bp CTGCATCAAACCAGTGCACGCACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCTCCGATTCCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: LHQTSARTSAES*PVTKVAPIPRP
Trigger: GGGCCGCGGAATCGGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS GCA 72 bp TGCATCAAACCAGTGCACGCACATCTGCCGAGAGTTTaGCAGTCACCAAGGTCGCTCCGATTCCGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: CIKPVHAHLPRV*QSPRSLRFRGP
Trigger: AGGGCCGCGGAATCGGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CAA 90 bp CAACCACGTCTGCATCAAACCAGTGCACGCACATCTGCCGAGAGTTaGCCAGTCACCAAGGTCGCTCCGATTCCGCGGCCCTTAAGGAGT +
Preference number: 6 (lower is better)
Translates to: QPRLHQTSARTSAES*PVTKVAPIPRPLRS
Trigger: ACTCCTTAAGGGCCGCGGAATCGGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGACGTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 72 bp CCCTCAGCTTCCAGTCGAGGCTGGGGAGATCCGTTCTaGGAAGCCAACAGTCGCTGCAAAGCTGGGAAAAAT +
Preference number: 6 (lower is better)
Translates to: PSASSRGWGDPF*EANSRCKAGKN
Trigger: ATTTTTCCCAGCTTTGCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS GCA 72 bp ACAACCACGTCTGCATCAAACCAGTGCACGCACATCTaGCGAGAGTTTGCCAGTCACCAAGGTCGCTCCGAT +
Preference number: 6 (lower is better)
Translates to: TTTSASNQCTHI*REFASHQGRSD
Trigger: ATCGGAGCGACCTTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGACGTGGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CAA 90 bp GCTCAGGCCCTGACTGCAAAGCAGGCTGAAACTGTAAGCCTTCTTTaGGGGTCCTCCCAGAAAAGCATGCTTCCCTGGGCACAGAGATAC +
Preference number: 6 (lower is better)
Translates to: AQALTAKQAETVSLL*GSSQKSMLPWAQRY
Trigger: GTATCTCTGTGCCCAGGGAAGCATGCTTTTCTGGGAGGACCCCAAAAGAAGGCTTACAGTTTCAGCCTGCTTTGCAGTCAGGGCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534586.1
CDS TCA 72 bp GATGCACCTCAGTTCACTTGCTGGAGCACTGATGTGTaGCTGTTTAACTGCTGCTGCTTCCTGTCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: DAPQFTCWSTDV*LFNCCCFLSQG
Trigger: TCCCTGGGACAGGAAGCAGCAGCAGTTAAACAGTCACACATCAGTGCTCCAGCAAGTGAACTGAGGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531207.5
ENST00000534586.1
ENST00000673806.1
CDS GCA 72 bp ATGCATCGACCGTGCAGACCAGCACCTTCCTGGCCCTaGTCCCAGATAATTTTATTTCCTCTGGTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: MHRPCRPAPSWP*SQIILFPLVLD
Trigger: ATCCAGGACCAGAGGAAATAAAATTATCTGGGAGCAGGGCCAGGAAGGTGCTGGTCTGCACGGTCGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531207.5
ENST00000534586.1
ENST00000673806.1
CDS CCA 72 bp AAGGTCGCTCCGATTCCGCGGCCCTTAAGGAGTATATaGCGAATTCTGCAAGAAAGGCCTAAGTGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: KVAPIPRPLRSI*RILQERPKWWQ
Trigger: TTGCCACCACTTAGGCCTTTCTTGCAGAATTCGCCATATACTCCTTAAGGGCCGCGGAATCGGAGCGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 72 bp TTTATGAATTTTTGTCCCTCAGCTTCCAGTCGAGGCTaGGGAGATCCGTTCTGGGAAGCCAACAGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: FMNFCPSASSRG*GDPFWEANSRC
Trigger: GCAGCGACTGTTGGCTTCCCAGAACGGATCTCCCCAGCCTCGACTGGAAGCTGAGGGACAAAAATTCATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 72 bp GACCTTCTGGATATTGTCATCTGTTCGGTGGGTGACTaGACGCCCACTTCGGGCATCATCTCGAACATCTTC +
Preference number: 6 (lower is better)
Translates to: DLLDIVICSVGD*TPTSGIISNIF
Trigger: GAAGATGTTCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CCA 72 bp AAGTCCTTGACCTTCTGGATATTGTCATCTGTTCGGTaGGTGACTGGACGCCCACTTCGGGCATCATCTCGA +
Preference number: 6 (lower is better)
Translates to: KSLTFWILSSVR*VTGRPLRASSR
Trigger: TCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CAA 90 bp GCCATCATCCTCACGGTTAACTGCCTGTTTGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCATCTGTTCGGTGGGTGACTGGACGC +
Preference number: 6 (lower is better)
Translates to: AIILTVNCLFEQTKS*TFWILSSVRWVTGR
Trigger: GCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGATGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CAA 90 bp AAGTCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGCAGACCAGCACCTTCCTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: KSHKAMKDEEQNHCS*KMHRPCRPAPSWPC
Trigger: GCAGGGCCAGGAAGGTGCTGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531207.5
ENST00000534586.1
CDS GCA 72 bp ATTAAATCGCCTACAACCACGTCTGCATCAAACCAGTaGACGCACATCTGCCGAGAGTTTGCCAGTCACCAA +
Preference number: 6 (lower is better)
Translates to: IKSPTTTSASNQ*THICREFASHQ
Trigger: TTGGTGACTGGCAAACTCTCGGCAGATGTGCGTGCACTGGTTTGATGCAGACGTGGTTGTAGGCGATTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CAA 72 bp CTGGATGCAGGGAACATGGAACAATCAGATGTGGGCTaGGCTTTTAGGAGGTCCTGGGCTAGTAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LDAGNMEQSDVG*AFRRSWASREE
Trigger: TTCTTCTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS TCA 72 bp GGTGGCAAATTAAGCAAGCAAGAAGAGATGCATCGGTaGTGTAACGTGCAAGCTCGCCCTAGATCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: GGKLSKQEEMHR*CNVQARPRSAE
Trigger: TTCTGCAGATCTAGGGCGAGCTTGCACGTTACATCACCGATGCATCTCTTCTTGCTTGCTTAATTTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 72 bp AACTGCCTGTTTGAACAAACCAAGTCCTTGACCTTCTaGATATTGTCATCTGTTCGGTGGGTGACTGGACGC +
Preference number: 6 (lower is better)
Translates to: NCLFEQTKSLTF*ILSSVRWVTGR
Trigger: GCGTCCAGTCACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CCA 72 bp TGGATGCAGGGAACATGGAACAATCAGATGTGGGCTTaGCTTTTAGGAGGTCCTGGGCTAGTAGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: WMQGTWNNQMWA*LLGGPGLVEKK
Trigger: TTTCTTCTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS CCA 72 bp TTATTCTGGATGCAGGGAACATGGAACAATCAGATGTaGGCTTGGCTTTTAGGAGGTCCTGGGCTAGTAGAG +
Preference number: 6 (lower is better)
Translates to: LFWMQGTWNNQM*AWLLGGPGLVE
Trigger: CTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS TCA 72 bp TCCTTTGTTCTAAATAGCGGTCACTCATTCTGGCACTaGACAACACAGGAACGTTTAACAGGCCACGACGGA +
Preference number: 6 (lower is better)
Translates to: SFVLNSGHSFWH*TTQERLTGHDG
Trigger: TCCGTCGTGGCCTGTTAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTGACCGCTATTTAGAACAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607673.2
CDS CCA 72 bp AGTTCCACGCAAGGTTTATTCTGGATGCAGGGAACATaGAACAATCAGATGTGGGCTTGGCTTTTAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SSTQGLFWMQGT*NNQMWAWLLGG
Trigger: ACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACCTTGCGTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS CAA 72 bp CTCACGGTTAACTGCCTGTTTGAACAAACCAAGTCCTaGACCTTCTGGATATTGTCATCTGTTCGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: LTVNCLFEQTKS*TFWILSSVRWV
Trigger: CACCCACCGAACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTTAACCGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000531785.1
ENST00000607673.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
ENST00000673806.1
CDS CAA 72 bp AAAGCAATGAAAGATGAGGAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGCAGACCAGCACCTTCC +
Preference number: 6 (lower is better)
Translates to: KAMKDEEQNHCS*KMHRPCRPAPS
Trigger: GGAAGGTGCTGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531207.5
ENST00000534586.1
CDS CAA 90 bp AGGTTTATTCTGGATGCAGGGAACATGGAACAATCAGATGTGGGCTaGGCTTTTAGGAGGTCCTGGGCTAGTAGAGAAGAAAAACATCCT +
Preference number: 6 (lower is better)
Translates to: RFILDAGNMEQSDVG*AFRRSWASREEKHP
Trigger: AGGATGTTTTTCTTCTCTACTAGCCCAGGACCTCCTAAAAGCCAAGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS TCA 72 bp TCCTTTGTTCTAAATAGCGGTCACTCATTCTGGCACTaGACAACACAGGAACGTTTAACAGGCCACGACTGT +
Preference number: 6 (lower is better)
Translates to: SFVLNSGHSFWH*TTQERLTGHDC
Trigger: ACAGTCGTGGCCTGTTAAACGTTCCTGTGTTGTTCAGTGCCAGAATGAGTGACCGCTATTTAGAACAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS GCA 72 bp TCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCAGCA +
Preference number: 6 (lower is better)
Translates to: SHKAMKDEEQNH*SLKMHRPCRPA
Trigger: TGCTGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531207.5
ENST00000534586.1
CDS GCA 72 bp TCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: SHKAMKDEEQNH*SLKMHRPCRPF
Trigger: GAAGGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667240.1
CDS CCA 72 bp AGTATATGGCGAATTCTGCAAGAAAGGCCTAAGTGGTaGCAAATTAAGCAAGCAAGAAGAGATGCATCGGTG +
Preference number: 6 (lower is better)
Translates to: SIWRILQERPKW*QIKQARRDASV
Trigger: CACCGATGCATCTCTTCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTGCAGAATTCGCCATATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CCA 72 bp AGGAGTATATGGCGAATTCTGCAAGAAAGGCCTAAGTaGTGGCAAATTAAGCAAGCAAGAAGAGATGCATCG +
Preference number: 6 (lower is better)
Translates to: RSIWRILQERPK*WQIKQARRDAS
Trigger: CGATGCATCTCTTCTTGCTTGCTTAATTTGCCACCACTTAGGCCTTTCTTGCAGAATTCGCCATATACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321844.6
ENST00000529331.2
ENST00000530460.2
ENST00000662483.1
ENST00000663165.1
ENST00000667240.1
CDS CAA 90 bp AAGTCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGCAGACCTTTTTCCTCAAACATGAGC +
Preference number: 6 (lower is better)
Translates to: KSHKAMKDEEQNHCS*KMHRPCRPFSSNMS
Trigger: GCTCATGTTTGAGGAAAAAGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS GCA 72 bp TCCCATAAAGCAATGAAAGATGAGGAACAGAATCACTaGTCGTTGAAAATGCATCGACCGTGCAGACCTTTT +
Preference number: 6 (lower is better)
Translates to: SHKAMKDEEQNH*SLKMHRPCRPF
Trigger: AAAAGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS CCA 72 bp AAACATTTATTGAGCAGTTCCACGCAAGGTTTATTCTaGATGCAGGGAACATGGAACAATCAGATGTGGGCT +
Preference number: 6 (lower is better)
Translates to: KHLLSSSTQGLF*MQGTWNNQMWA
Trigger: AGCCCACATCTGATTGTTCCATGTTCCCTGCATCCAGAATAAACCTTGCGTGGAACTGCTCAATAAATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531785.1
CDS CAA 72 bp AAAGCAATGAAAGATGAGGAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGCAGACCTTTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: KAMKDEEQNHCS*KMHRPCRPFSS
Trigger: TGAGGAAAAAGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000662483.1
CDS CAA 72 bp AAAGCAATGAAAGATGAGGAACAGAATCACTGCTCGTaGAAAATGCATCGACCGTGCAGACCCTTCAAAACA +
Preference number: 6 (lower is better)
Translates to: KAMKDEEQNHCS*KMHRPCRPFKT
Trigger: TGTTTTGAAGGGTCTGCACGGTCGATGCATTTTCAACGAGCAGTGATTCTGTTCCTCATCTTTCATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667240.1