RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GUCY1A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164116

Ensembl transcript IDs: ENST00000296518.11, ENST00000393832.7, ENST00000443668.6, ENST00000455639.6, ENST00000506455.6, ENST00000509901.5, ENST00000511108.5, ENST00000511507.5, ENST00000512983.5, ENST00000513574.1, ENST00000515201.5, ENST00000515602.5, ENST00000621234.4

Found 1061 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGCGTCTCTaGCCTCCCACCTCTCATATATGCTGTGTTCTCCATCCCTGCACC +
Preference number: 1 (lower is better)
Translates to: GGDGKSLLTGIARRL*PPTSHICCVLHPCT
Trigger: GGTGCAGGGATGGAGAACACAGCATATATGAGAGGTGGGAGGGCAGAGACGCCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR GCA 90 bp TGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAGCAGATGGCAGTGAACCCAACGATG +
Preference number: 1 (lower is better)
Translates to: CWSKRVYSALSMVMT*SGEHWEQMAVNPTM
Trigger: CATCGTTGGGTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTTCGACCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR CCA 90 bp GTGTACAGTGCATTGAGCATGGTGATGACCTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAACCCAACGATGTCTGAGAAGAGCATG +
Preference number: 1 (lower is better)
Translates to: VYSALSMVMTCSGEH*EQMAVNPTMSEKSM
Trigger: CATGCTCTTCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR TCA 90 bp CCACAGACCACCCTCTTCCATCCTATGCCTTCTTTTAACCTAACCTaGGACAGAGCTGGGAAGTCTTTGCCTTGGCGTGGCTGGAAATAT +
Preference number: 1 (lower is better)
Translates to: PQTTLFHPMPSFNLT*DRAGKSLPWRGWKY
Trigger: ATATTTCCAGCCACGCCAAGGCAAAGACTTCCCAGCTCTGTCTCAGGTTAGGTTAAAAGAAGGCATAGGATGGAAGAGGGTGGTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR GCA 90 bp CTCACAGGAATCGCAAGGCGTCTCTGCCCTCCCACCTCTCATATATaGTGTGTTCTCCATCCCTGCACCCTTAAAGACAGTCTTCATTTA +
Preference number: 1 (lower is better)
Translates to: LTGIARRLCPPTSHI*CVLHPCTLKDSLHL
Trigger: TAAATGAAGACTGTCTTTAAGGGTGCAGGGATGGAGAACACAGCATATATGAGAGGTGGGAGGGCAGAGACGCCTTGCGATTCCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR TCA 90 bp CAGGGAGGCATTAACGACACTTCCACTTCCGTTTCATATAATACGTaGGCAGCTGCCTTTATGATGCCGGGAAGAATCAGGGAGGTGGTT +
Preference number: 1 (lower is better)
Translates to: QGGINDTSTSVSYNT*AAAFMMPGRIREVV
Trigger: AACCACCTCCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTCACGTATTATATGAAACGGAAGTGGAAGTGTCGTTAATGCCTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 90 bp TCATGTGAACGGAGTACAACAAGTAGGGCTGATTCACAAACTCGCTaGAATCATTATGGAAGCAGGGAGGCATTAACGACACTTCCACTT +
Preference number: 1 (lower is better)
Translates to: SCERSTTSRADSQTR*NHYGSREALTTLPL
Trigger: AAGTGGAAGTGTCGTTAATGCCTCCCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCGTTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR CCA 90 bp GGGCTTGATTGTGGATTTAAAGCATTATACAGCACTAGACTTCACTaGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: GLDCGFKALYSTRLH*SFACKAPSGQFSSW
Trigger: CCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTGAAGTCTAGTGCTGTATAATGCTTTAAATCCACAATCAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR GCA 90 bp GGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTaGAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGA +
Preference number: 1 (lower is better)
Translates to: GYDCAESGCLLPELH*SVLVDVRTPINILR
Trigger: TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
3UTR GCA 90 bp CTGGGAATGATTATTTCTAAAGGCCCAGAATTCCCAGACCACTGTTaGCATAACTTTCCAAAGAGCTTCAGTTTTGCTGCTCTTGTTCCA +
Preference number: 1 (lower is better)
Translates to: LGMIISKGPEFPDHC*HNFPKSFSFAALVP
Trigger: TGGAACAAGAGCAGCAAAACTGAAGCTCTTTGGAAAGTTATGGCAACAGTGGTCTGGGAATTCTGGGCCTTTAGAAATAATCATTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATaGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTAGGAGGCTA +
Preference number: 1 (lower is better)
Translates to: KRRMMEDYVISVMDL*LGHKHLRQVILRRL
Trigger: TAGCCTCCTAAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
3UTR GCA 90 bp CCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAG +
Preference number: 1 (lower is better)
Translates to: PEILILLVSHLQSLK*FQRLYTSSMSQTPK
Trigger: CTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR TCA 90 bp TTTGGAGTCAGAATTTCAAAGTATTCTTCAAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATCAGCCTTCTGATGCCATTGCCAAAT +
Preference number: 1 (lower is better)
Translates to: FGVRISKYSSKLGFP*KSLLFISLLMPLPN
Trigger: ATTTGGCAATGGCATCAGAAGGCTGATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTTGAAGAATACTTTGAAATTCTGACTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR TCA 90 bp AGGATTAATTGGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTaGTTCTTCCCCTTTTCACTAAAGGATACAAATATTTCCCAGGTC +
Preference number: 1 (lower is better)
Translates to: RINWLRYCKLMAFSN*FFPFSLKDTNISQV
Trigger: GACCTGGGAAATATTTGTATCCTTTAGTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCCAATTAATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR TCA 90 bp CTCAATACAGATGGATTTGGCAGCATTTCAGATGGAACAAACATCTaGGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCATTTTCA +
Preference number: 1 (lower is better)
Translates to: LNTDGFGSISDGTNI*ADTSRFGHYAKSFS
Trigger: TGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAATGCTGCCAAATCCATCTGTATTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR GCA 90 bp AGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATaGAAAGTCATTTTCAGCCAAGTAATTTTCCTCACAATCTGGAAG +
Preference number: 1 (lower is better)
Translates to: RWNKHLSRYFKIWAL*KVIFSQVIFLTIWK
Trigger: CTTCCAGATTGTGAGGAAAATTACTTGGCTGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CCA 90 bp CAGCATTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTaGGCATTATGCAAAGTCATTTTCAGCCAAGTAATTTTCCTCACA +
Preference number: 1 (lower is better)
Translates to: QHFRWNKHLSRYFKI*ALCKVIFSQVIFLT
Trigger: TGTGAGGAAAATTACTTGGCTGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAATGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 90 bp ACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATaGAGCATGGTGATGACCTGCAGCGGTGAGCACTGGGAGCAGATG +
Preference number: 2 (lower is better)
Translates to: TSSSPHCWSKRVYSA*SMVMTCSGEHWEQM
Trigger: CATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCACCATGGGCTAGCCTaGGTACTAAGGGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCHHGLA*VLREAV
Trigger: AACTGCCTCCCTTAGTACCCAGGCTAGCCCATGGTG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR TCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTGGTGGGTCCCCTGGATaGTTACTTTACTCCCATGTT +
Preference number: 2 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCGGSPG*LLYSHV
Trigger: AACATGGGAGTAAAGTAATCATCCAGGGGACCCACC...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 2 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 2 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPASLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR GCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTACTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 2 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR GCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTGTTCCAAGTGTGCCTaGACGTGTGTTTACGTGTGT +
Preference number: 2 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCCSKCA*TCVYVC
Trigger: ACACACGTAAACACACGTGCAGGCACACTTGGAACA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp ATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 2 (lower is better)
Translates to: IPGISLGKFGGSSSLDRGLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...CCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTGTTCCAAGTGTGCCTaGACGTGTGTTTACGTGTGT +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPACSKCA*TCVYVC
Trigger: ACACACGTAAACACACGTGCAGGCACACTTGGAACA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPATGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 2 (lower is better)
Translates to: HWSFACKAPSGQFSSWVIQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGCACCATGGGCTAGCCTaGGTACTAAGGGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMHHGLA*VLREAV
Trigger: AACTGCCTCCCTTAGTACCCAGGCTAGCCCATGGTG...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR TCA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 2 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 2 (lower is better)
Translates to: STIPKVLSEALHIFNESNEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPALWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAATCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 2 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKSLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 2 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 2 (lower is better)
Translates to: STIPKVLSEALHIFNESNAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR TCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 2 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 2 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR TCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCTTTCCCTTTGCTTCTTaGTGCAAAGCATCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: HWSFACKAPSGQFSSWVIFPFAS*CKASLE
Trigger: TTCTAAAGATGCTTTGCATCAAGAAGCAAAGGGAAA...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR TCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACGTAATCTCAGAGGACTaGTGTCTATTCCTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHVISED*CLFLRH
Trigger: GTGCCTGAGGAATAGACATCAGTCCTCTGAGATTAC...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 2 (lower is better)
Translates to: APEILILLVSHLQSLKCFSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 2 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 2 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNSLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACTTGCCTTGGCGTGGCTaGAAATATCAGGGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHLPWRG*KYQGEE
Trigger: TTCTTCTCCCTGATATTTCCAGCCACGCCAAGGCAA...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR TCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR TCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 2 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp AACCTCACAGGGAAATATGGAGCACAGAAGGTCTACTGTCTTTTTCTTCTCCTCATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: NLTGKYGAQKVYCLFLLLIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...GAGGAGAAGAAAAAGACAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGATCTGTCATGGATTTATaGCTGGGCCACAAACACCTC +
Preference number: 2 (lower is better)
Translates to: ELHCSVLVDVRTPINILRSVMDL*LGHKHL
Trigger: GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGA...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
3UTR CAA 90 bp CAACATAACTCAGTACCCGTAATCCCCAACCTGATTACAGGCTGTTaGTCCACTATTTTTCCATCTTCAATACCTCAAAGCTCTGACTTG +
Preference number: 2 (lower is better)
Translates to: QHNSVPVIPNLITGC*STIFPSSIPQSSDL
Trigger: CAAGTCAGAGCTTTGAGGTATTGAAGATGGAAAAATAGTGGACAAACAGCCTGTAATCAGGTTGGGGATTACGGGTACTGAGTTATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAATCTGGCTACCATCAGTaGTCTGGATCTGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKSGYHQ*SGSEKF
Trigger: AAACTTTTCAGATCCAGACCACTGATGGTAGCCAGA...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR TCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR TCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 2 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: STIPKVLSEALHIFNESNDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 2 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR TCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 2 (lower is better)
Translates to: DLAPEILILLVSHLQSLKIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 2 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 2 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACAGATGTCTGCTGAAGTaGGTCCATATTGTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNRCLLK*VHIVPS
Trigger: ACTTGGAACAATATGGACCCACTTCAGCAGACATCT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 2 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 2 (lower is better)
Translates to: APEILILLVSHLQSLKCFNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR CAA 90 bp GCAGCATTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTaGGGCATTATGCAAAGTCATTTTCAGCCAAGTAATTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: AAFQMEQTSEQILQD*GIMQSHFQPSNFPH
Trigger: GTGAGGAAAATTACTTGGCTGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAATGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 2 (lower is better)
Translates to: APEILILLVSHLQSLKCFLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 2 (lower is better)
Translates to: KQEKDCDLAPEILILLVSLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR CCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATACCAATGTCCTTTATaGTGGGTCCCCTGGATGATT +
Preference number: 2 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIYQCPL*WVPWMI
Trigger: AATCATCCAGGGGACCCACCATAAAGGACATTGGTA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTAATGAATCAAATCAGTaGGGCAAATGGCAATTGTAT +
Preference number: 2 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPNESNQ*GKWQLY
Trigger: ATACAATTGCCATTTGCCCCACTGATTTGATTCATT...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
3UTR-3UTR TCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
3UTR-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: EKDCDLAPEILILLVSHLSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: DLAPEILILLVSHLQSLKAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: DCDLAPEILILLVSHLQSAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR GCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 2 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAAGATGTCTGCTGAAGTaGGTCCATATTGTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIRCLLK*VHIVPS
Trigger: ACTTGGAACAATATGGACCCACTTCAGCAGACATCT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR GCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGAAAGAATAGCTCCTaGATTTTCAGGAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQRKNSS*IFRRNS
Trigger: ACTGTTTCTCCTGAAAATGCAGGAGCTATTCTTTCT...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CCA 72 bp TTGCAGAATAGCGATGTGGGAATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGGGATGGCTTGGTGCTT +
Preference number: 3 (lower is better)
Translates to: LQNSDVGITSED*GLLGDRDGLVL
Trigger: AAGCACCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR CCA 72 bp GCATTGAGCATGGTGATGACCTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAACCCAACGATGTCTGAG +
Preference number: 3 (lower is better)
Translates to: ALSMVMTCSGEH*EQMAVNPTMSE
Trigger: CTCAGACATCGTTGGGTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR TCA 72 bp GTACAGTGCATTGAGCATGGTGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGCAGTGAACCCAACGAT +
Preference number: 3 (lower is better)
Translates to: VQCIEHGDDLQR*ALGADGSEPND
Trigger: ATCGTTGGGTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp AAGCGAGTGTACAGTGCATTGAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAGCAGATGGCAGTGAAC +
Preference number: 3 (lower is better)
Translates to: KRVYSALSMVMT*SGEHWEQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 3 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPALLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp GGTAAGTCCCTCCTCACAGGAATCGCAAGGCGTCTCTaGCCTCCCACCTCTCATATATGCTGTGTTCTCCAT +
Preference number: 3 (lower is better)
Translates to: GKSLLTGIARRL*PPTSHICCVLH
Trigger: ATGGAGAACACAGCATATATGAGAGGTGGGAGGGCAGAGACGCCTTGCGATTCCTGTGAGGAGGGACTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 3 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR TCA 72 bp ACCCTCTTCCATCCTATGCCTTCTTTTAACCTAACCTaGGACAGAGCTGGGAAGTCTTTGCCTTGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: TLFHPMPSFNLT*DRAGKSLPWRG
Trigger: GCCACGCCAAGGCAAAGACTTCCCAGCTCTGTCTCAGGTTAGGTTAAAAGAAGGCATAGGATGGAAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR TCA 72 bp CAAGAGAACTGCACTTTGCTACCGTCTCTGCAGCACTaGATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: QENCTLLPSLQH*ISVLEETVSPS
Trigger: GGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAGTGCTGCAGAGACGGTAGCAAAGTGCAGTTCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 3 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 3 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 3 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCCRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR TCA 72 bp GTGTCTGGATGCTGCACATCCCTGTATCACTGGGAATaGTTATTTCTAAAGGCCCAGAATTCCCAGACCACT +
Preference number: 3 (lower is better)
Translates to: VSGCCTSLYHWE*LFLKAQNSQTT
Trigger: AGTGGTCTGGGAATTCTGGGCCTTTAGAAATAATCATTCCCAGTGATACAGGGATGTGCAGCATCCAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR GCA 72 bp CGGAGTACAACAAGTAGGGCTGATTCACAAACTCGCTaGAATCATTATGGAAGCAGGGAGGCATTAACGACA +
Preference number: 3 (lower is better)
Translates to: RSTTSRADSQTR*NHYGSREALTT
Trigger: TGTCGTTAATGCCTCCCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTGATAGGTTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: LTPTTPAKTDPE*SPIRILIGSPW
Trigger: CCATGGAGAACCTATCAAGATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR CCA 72 bp GAGTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATaGGGAGACATAACTTCATCAGAGAGCTCCATCATC +
Preference number: 3 (lower is better)
Translates to: ECSPIRILIGSP*GDITSSESSII
Trigger: GATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
3UTR-3UTR CAA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGGGTCTGCTGAAATGTTaGATCAAGACTACATTCCAT +
Preference number: 3 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARGLLKC*IKTTFH
Trigger: ATGGAATGTAGTCTTGATCAAACATTTCAGCAGACC...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 3 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CAA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGTGCATCAACAAGGGCTaGATTGTGGATTTAAAGCAT +
Preference number: 3 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARCINKG*IVDLKH
Trigger: ATGCTTTAAATCCACAATCAAGCCCTTGTTGATGCA...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR TCA 72 bp TTTAAACAGCTCAGCATGGCAATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTCCAAGTGTGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: FKQLSMAIEDVC*SGSILFQVCLH
Trigger: GTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAGACATCTTCTATTGCCATGCTGAGCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR TCA 72 bp ATTAACGACACTTCCACTTCCGTTTCATATAATACGTaGGCAGCTGCCTTTATGATGCCGGGAAGAATCAGG +
Preference number: 3 (lower is better)
Translates to: INDTSTSVSYNT*AAAFMMPGRIR
Trigger: CCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTCACGTATTATATGAAACGGAAGTGGAAGTGTCGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTaGATATTCAACATAGTCATGATCCCGCTAAACGTC +
Preference number: 3 (lower is better)
Translates to: TELSHLLTRTTN*IFNIVMIPLNV
Trigger: GACGTTTAGCGGGATCATGACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 3 (lower is better)
Translates to: STIPKVLSEALHIFNESNHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
3UTR-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGCCTCAAAGCTCTGACTaGGGCCCCTTATTTATTTTA +
Preference number: 3 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMPQSSD*GPLFIL
Trigger: TAAAATAAATAAGGGGCCCAAGTCAGAGCTTTGAGG...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAACAAGACCCCATCTCTTaGTGTGCTGATTTATTTTCC +
Preference number: 3 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKQDPIS*CADLFS
Trigger: GGAAAATAAATCAGCACACAAAGAGATGGGGTCTTG...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR TCA 72 bp GCTTTCCTTGAAAGTCTCTCCTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCAGAATTGTCATATCTT +
Preference number: 3 (lower is better)
Translates to: AFLESLSCSSAF*CHCQIAELSYL
Trigger: AAGATATGACAATTCTGCAATTTGGCAATGGCATCAGAAGGCTGATGAACAGGAGAGACTTTCAAGGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp ATTATTTCTAAAGGCCCAGAATTCCCAGACCACTGTTaGCATAACTTTCCAAAGAGCTTCAGTTTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: IISKGPEFPDHC*HNFPKSFSFAA
Trigger: AGCAGCAAAACTGAAGCTCTTTGGAAAGTTATGGCAACAGTGGTCTGGGAATTCTGGGCCTTTAGAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CCA 72 bp ATGATGGAAGACTATGTAATATCTGTCATGGATTTATaGCTGGGCCACAAACACCTCAGGCAAGTCATTCTT +
Preference number: 3 (lower is better)
Translates to: MMEDYVISVMDL*LGHKHLRQVIL
Trigger: AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
3UTR-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 3 (lower is better)
Translates to: APEILILLVSHLQSLKCFHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
3UTR-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGGGTCTGCTGAAATGTTaGATCAAGACTACATTCCAT +
Preference number: 3 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMGLLKC*IKTTFH
Trigger: ATGGAATGTAGTCTTGATCAAACATTTCAGCAGACC...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 3 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNCRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR GCA 72 bp CTCCTGTTCATCAGCCTTCTGATGCCATTGCCAAATTaGAGAATTGTCATATCTTTGTCAAACATGAAATGG +
Preference number: 3 (lower is better)
Translates to: LLFISLLMPLPN*RIVISLSNMKW
Trigger: CCATTTCATGTTTGACAAAGATATGACAATTCTGCAATTTGGCAATGGCATCAGAAGGCTGATGAACAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp TTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACATCTTCAATGAGTCAA +
Preference number: 3 (lower is better)
Translates to: LILLVSHLQSLK*FQRLYTSSMSQ
Trigger: TTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR GCA 72 bp AGACTAATTAGCCTTGAGAGTGACATAAAATTCCAATaGCAGACATCCCAGCTTTATGCTCATACTTATGGT +
Preference number: 3 (lower is better)
Translates to: RLISLESDIKFQ*QTSQLYAHTYG
Trigger: ACCATAAGTATGAGCATAAAGCTGGGATGTCTGGCATTGGAATTTTATGTCACTCTCAAGGCTAATTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAACTGATTACAGGCTGTTaGTCCACTATTTTTCCATCT +
Preference number: 3 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQLITGC*STIFPS
Trigger: AGATGGAAAAATAGTGGACAAACAGCCTGTAATCAG...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAATTCTGTATTTCCCTTaGCTTCTTGATGCAAAGCAT +
Preference number: 3 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQILYFP*LLDAKH
Trigger: ATGCTTTGCATCAAGAAGCAAAGGGAAATACAGAAT...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 3 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
3UTR GCA 72 bp AAACATCTGAGCAGATACTTCAAGATTTGGGCATTATaGAAAGTCATTTTCAGCCAAGTAATTTTCCTCACA +
Preference number: 3 (lower is better)
Translates to: KHLSRYFKIWAL*KVIFSQVIFLT
Trigger: TGTGAGGAAAATTACTTGGCTGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 72 bp TCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATaGAGCATGGTGATGACCTGCAGCGGTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: SPHCWSKRVYSA*SMVMTCSGEHW
Trigger: CCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp GTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACCAAATCCGCACATGGTaGGATCACGCCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VMTVLSLGVYCQNCTAVYQIRTW*DHARLG
Trigger: CCCCAGCCGGGCGTGATCTCACCATGTGCGGATTTG...GTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCATCTTGCGCGGAGACCGCGGTaGCCCCCTGCTCACGCTTTC +
Preference number: 4 (lower is better)
Translates to: LDRFSMGRHNFIRELHHLARRPR*PPAHAF
Trigger: GAAAGCGTGAGCAGGGGGCCACCGCGGTCTCCGCGC...AAGATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR TCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPADDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCGCAGCCGGCCGGGTaGAGTTGCCCTGAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNPQPAG*SCPEAR
Trigger: GCGGGCTTCAGGGCAACTTCACCCGGCCGGCTGCGG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCGGAGGCCGCAGCGCTaGACGCGGCTGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTRRPQR*TRLMGS
Trigger: AGAGCCCATCAGCCGCGTGCAGCGCTGCGGCCTCCG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACGCCTCCAGCCCTGCTaGCTCCGGGGTCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESRLQPC*LRGPGI
Trigger: GATGCCTGGACCCCGGAGGCAGCAGGGCTGGAGGCG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR CCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTAGGAGGCTAATAAGCAGTATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WLGHKHLRQVILRRLISSITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...ACTGCTTATTAGCCTCCTAAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACCAAGAGCCGCAGTCTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNQEPQS*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAGACTGCGGCTCTTG...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR TCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTATCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVIRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ACTTGTGGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: TCGYDCAESGCLLPELHCSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...GCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACCACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTRRDAA*LGNCIA
Trigger: GGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATCAATGGCTGCTCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHQWLLC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGAGCAGCCATTG...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACACCGCCTCCAGCCCTaGTGCCTCCGGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLHRLQP*CLRGPG
Trigger: GCCTGGACCCCGGAGGCAGCAGGGCTGGAGGCGGTG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR GCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACCCAATGGTCTCCACCTaGTGCAACTGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNPMVST*CNCLLC
Trigger: GCAGAGCAAGCAGTTGCAGCAGGTGGAGACCATTGG...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGCTCAGGCGACAGGGTaGAGACAGGCGCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNAQATG*RQARRP
Trigger: CGGTCTCCGCGCCTGTCTGCACCCTGTCGCCTGAGC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACACGAAACCAGGACAGTCTTCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: FGGSSSLDRGVNTKPGQSSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...AGACTGTCCTGGTTTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: VMTVLSLGVYCQNCTAVYSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...GTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp ATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: IPGISLGKFGGSSSLDRGWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...CCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCAAATCCGCACATGGTaGGATCACGCCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTQIRTW*DHARLG
Trigger: CCCCAGCCGGGCGTGATCTCACCATGTGCGGATTTG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGGACGGCAGCTCACTGTaGTTAAGCAGTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWDGSSL*LSSVWM
Trigger: CATCCAGACACTGCTTAATCACAGTGAGCTGCCGTC...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACGGGTGAAGTTGCCCTaGAGCCCGCCACCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLRVKLP*SPPPPP
Trigger: TGGAGGCGGTGGCGGGCTTCAGGGCAACTTCACCCG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR GCA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: DCAESGCLLPELHCSVLVWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SIQKMADSGDFTREVWWKWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp GGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAAGAAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCC +
Preference number: 4 (lower is better)
Translates to: GTLQDSNLLARVTLFPKRRRDAA*LGNCIA
Trigger: GGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCT...TCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443668.6
ENST00000509901.5
CDS-3UTR GCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCGAGCTGGGAAGTCTTTaGCTTGGCGTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVIELGSL*LGVAGN
Trigger: ATTTCCAGCCACGCCAAGGCAAAGACTTCCCAGCTC...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGGCATCCCCCAGCTaGGCCCGCTCGCTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFQASPS*ARSLAC
Trigger: GCAGGCAAGCGAGCGGGCGCAGCTGGGGGATGCCTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTACCGCGGTGGCCCCCTaGTCACGCTTTCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTTAVAP*SRFLQE
Trigger: CTCTTGGAGAAAGCGTGAGCAGGGGGCCACCGCGGT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGCTCAGGCGACAGGGTaGAGACAGGCGCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLAQATG*RQARRP
Trigger: CGGTCTCCGCGCCTGTCTGCACCCTGTCGCCTGAGC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: IPGISLGKFGGSSSLDRGASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...CCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp TGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTGATGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: CAESGCLLPELHCSVLVDAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...ATCAACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCTCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVISLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTTGTTCCTTGTTGGTAAGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTACTGTATCGCCCGCGTaGCTCCCAGACAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VCSLLVSIQKMADSGDFTTVSPA*LPDSPP
Trigger: AGGAGGACTGTCTGGGAGCCACGCGGGCGATACAGT...AGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443668.6
ENST00000509901.5
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMQVSSA*VCSRLL
Trigger: GAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPQVSSA*VCSRLL
Trigger: GAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTG...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTQVSSA*VCSRLL
Trigger: GAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGCGCGGAGACCGCGGTaGCCCCCTGCTCACGCTTTC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLARRPR*PPAHAF
Trigger: GAAAGCGTGAGCAGGGGGCCACCGCGGTCTCCGCGC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSDSLGT*PGASKE
Trigger: CTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTC...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPASCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVISVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp TGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTAGGAGGCTAATAAGCAGTTCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: WLGHKHLRQVILRRLISSSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...ACTGCTTATTAGCCTCCTAAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCTTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFIFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCTGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRICLLPC*DLLLMS
Trigger: GCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACA...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFIWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
CDS-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLRRDAA*LGNCIA
Trigger: GGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp CTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCATCTTCTGAGTCCTGGTCTCTaGAGCCGCCCAATCGCCATA +
Preference number: 4 (lower is better)
Translates to: LDRFSMGRHNFIRELHHLLSPGL*SRPIAI
Trigger: TATGGCGATTGGGCGGCTGCAGAGACCAGGACTCAG...AAGATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR CCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VMTVLSLGVYCQNCTAVYECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp AACCTCACAGGGAAATATGGAGCACAGAAGGTCTACTGTCTTTTTCTTCTCCTCTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: NLTGKYGAQKVYCLFLLLCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...GAGGAGAAGAAAAAGACAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAACTGTATCGCCCGCGTaGCTCCCAGACAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESTVSPA*LPDSPP
Trigger: AGGAGGACTGTCTGGGAGCCACGCGGGCGATACAGT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR CCA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCCCTGCTTCTTGGCAATaGCTGCTCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFIPASWQ*LLCCNC
Trigger: GCAGTTGCAGCAGAGCAGCCATTGCCAAGAAGCAGG...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGAGCCGCAGTCTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSEPQSW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAGACTGCGGCTC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACAAGAGCCGCAGTCTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTQEPQS*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAGACTGCGGCTCTTG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GAACGGAGTACAACAAGTAGGGCTGATTCACAAACTCGCTGCAATCATTATGGAGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ERSTTSRADSQTRCNHYGVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...TCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCGGTGGGTCCCCTGGATaGTTACTTTACTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIGGSPG*LLYSHV
Trigger: AACATGGGAGTAAAGTAATCATCCAGGGGACCCACC...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCAAATCCGCACATGGTaGGATCACGCCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSQIRTW*DHARLG
Trigger: CCCCAGCCGGGCGTGATCTCACCATGTGCGGATTTG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRRRDAA*LGNCIA
Trigger: GGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCATGGTCTCCACCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSMVSTC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGTGGAGACCAT...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAACTGGGATGTTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTNWDVW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAACATCCCAGTT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPACRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCTCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSQVSSA*VCSRLL
Trigger: GAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTG...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTATCATGGATTTATGGCTaGGCCACAAACACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: YDCAESGCLLPELHCSVLSWIYG*ATNTSG
Trigger: GCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGA...TAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTAGGAGGCTAATAAGCAGTTCTGTCATGGATTTATaGCTGGGCCACAAACACCTC +
Preference number: 4 (lower is better)
Translates to: WLGHKHLRQVILRRLISSSVMDL*LGHKHL
Trigger: GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGA...ACTGCTTATTAGCCTCCTAAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGAGCCGCAGTCTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSEPQSW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAGACTGCGGCTC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAATAGGCATCGCCAATaGTCTCCACTGGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVNRHRQ*SPLVFL
Trigger: AAGAAAAACCAGTGGAGACCATTGGCGATGCCTATT...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509901.5
3UTR CAA 72 bp GACATTACTGAACTTCTTGGCTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAACCTCACAGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: DITELLGLHNLP*PQLLSNLTGKY
Trigger: ATATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTACCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGATGACCTGCAGCGGTaGGCACTGGGAGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFDDLQR*ALGADG
Trigger: GCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SHLDRFSMGRHNFIRELHDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...ATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAAATCCGCACATGGTaGGATCACGCCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFQIRTW*DHARLG
Trigger: CCCCAGCCGGGCGTGATCTCACCATGTGCGGATTTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCTCTTTTAACCTAACCTaGGACAGAGCTGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVISFNLT*DRAGKS
Trigger: AGACTTCCCAGCTCTGTCTCAGGTTAGGTTAAAAGA...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACAGGAAAACTCTGCACTaGAACCTGCTTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNRKTLH*NLLLEN
Trigger: GTTTTCCAGAAGCAGGTTTCAGTGCAGAGTTTTCCT...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAATCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTTCCAGGCTGCTCGCTaGTCTAGCGCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMFQAAR*SSAGKV
Trigger: CACTTTTCCTGCGCTAGAGCAGCGAGCAGCCTGGAA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACCAATGGTCTCCACCTaGTGCAACTGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTPMVST*CNCLLC
Trigger: GCAGAGCAAGCAGTTGCAGCAGGTGGAGACCATTGG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACACGAAACCAGGACAGTCTCTCTGCACTGAAACCTaGTTCTGGAAAACTGACTCT +
Preference number: 4 (lower is better)
Translates to: FGGSSSLDRGVNTKPGQSLCTET*FWKTDS
Trigger: AGAGTCAGTTTTCCAGAAGCAGGTTTCAGTGCAGAG...AGACTGTCCTGGTTTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAACCGCGGTGGCCCCCTaGTCACGCTTTCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLTAVAP*SRFLQE
Trigger: CTCTTGGAGAAAGCGTGAGCAGGGGGCCACCGCGGT...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGTAAACTGGGATGTTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LHCSVLVDVRTPINILRVNWDVW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAACATCCCAGTT...TACTCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp ATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IQKMADSGDFTREVWWKFCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...GAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
CDS-3UTR CCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATAGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: LPELHCSVLVDVRTPINIGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAAGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATAAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: LPELHCSVLVDVRTPINISSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTDSLGT*PGASKE
Trigger: CTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTDSLGT*PGASKE
Trigger: CTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTC...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp CTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGTAGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LHCSVLVDVRTPINILRVVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...TACTCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGATTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILRFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAAGACCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GTLQDSNLLARVTLFPKRPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...TCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp AACCTCACAGGGAAATATGGAGCACAGAAGGTCTACTGTCTTTTTCTTCTCCTCGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: NLTGKYGAQKVYCLFLLLDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...GAGGAGAAGAAAAAGACAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GTTTGTTCCTTGTTGGTAAGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VCSLLVSIQKMADSGDFTDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...AGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGCAAAGATCTACTAGCTaGCGTGCTAAGAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARQRSTS*RAKNRR
Trigger: TCTTCTGTTCTTAGCACGTCAGCTAGTAGATCTTTG...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTCLLPC*DLLLMS
Trigger: GCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMCLLPC*DLLLMS
Trigger: GCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTCLLPC*DLLLMS
Trigger: GCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAATGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPELHCSVLVDVRTPINIHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TCGTGGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SWYTAGLKFVSQSDIVSKRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...TTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: DCAESGCLLPELHCSVLVKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTGAGTCCTGGTCTCTaGAGCCGCCCAATCGCCATA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLSPGL*SRPIAI
Trigger: TATGGCGATTGGGCGGCTGCAGAGACCAGGACTCAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAACTGGGATGTTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSNWDVW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAACATCCCAGTT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp GTTTGTTCCTTGTTGGTAAGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VCSLLVSIQKMADSGDFTCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...AGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATAGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: LPELHCSVLVDVRTPINIASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAGGACTGGGGTTTGCTaGGGGACAGGGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSRTGVC*GTGMAW
Trigger: CCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTATCACCAGCGAGGACTaGGGTTTGCTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFITSED*GLLGDR
Trigger: CCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGAT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCTCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLCSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTGATAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: CAESGCLLPELHCSVLVDNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...ATCAACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTACCAATGTCCTTTATaGTGGGTCCCCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAYQCPL*WVPWMI
Trigger: AATCATCCAGGGGACCCACCATAAAGGACATTGGTA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTAGATGTCTGCTGAAGTaGGTCCATATTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCRCLLK*VHIVPS
Trigger: ACTTGGAACAATATGGACCCACTTCAGCAGACATCT...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGGTTAGGAACTTGACTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMVRNLT*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAGTCAAGTTCCTAAC...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393832.7
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCACTGTATCGCCCGCGTaGCTCCCAGACAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSTVSPA*LPDSPP
Trigger: AGGAGGACTGTCTGGGAGCCACGCGGGCGATACAGT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR CCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACAACCTGAGACAGAGCTaGGAAGTCTTTGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHNLRQS*EVFALA
Trigger: CGCCAAGGCAAAGACTTCCCAGCTCTGTCTCAGGTT...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGAGCACTAGACTTCACTaGAGCTTTGCATGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWSTRLH*SFACKA
Trigger: AGCTTTACATGCAAAGCTCCAGTGAAGTCTAGTGCT...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGAGACAATATGGTCTATaGTACTTCACTAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWRQYGL*YFTRVV
Trigger: GACCACCCTAGTGAAGTACCATAGACCATATTGTCT...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCAGGGGAACTGAGTCCTaGTCTCTGCAGCCGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLRGTES*SLQPPN
Trigger: ATTGGGCGGCTGCAGAGACCAGGACTCAGTTCCCCT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCGCCAATGGTCTCCACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSANGLH*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTGGAGACCATTGGC...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509901.5
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNDSLGT*PGASKE
Trigger: CTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: DCAESGCLLPELHCSVLVRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCCTTGCCACAGCTGCTaGGCAACCTCACAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSPCHSC*ATSQGN
Trigger: ATTTCCCTGTGAGGTTGCTCAGCAGCTGTGGCAAGG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGGTGGGTCCCCTGGATaGTTACTTTACTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTGGSPG*LLYSHV
Trigger: AACATGGGAGTAAAGTAATCATCCAGGGGACCCACC...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTGTGTCTCCCTCTTTaGTCACCCCAAAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLCLPL*SPQRNP
Trigger: AGGGTTCCTTTGGGGTGATCAAAGAGGGAGACACAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455639.6
ENST00000509901.5
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGGCACACCTTTACATaGCACACATACCCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMWHTFT*HTYPFV
Trigger: CACGAAGGGGTATGTGTGTCATGTAAAGGTGTGCCA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CACTGGAGCTTTGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCTGGGTAATCCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: HWSFACKAPSGQFSSWVIQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...GATTACCCAGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPANSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAGGGCTTGGTGGGCTTaGTCAAGGGTAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYRAWWA*SRVAFS
Trigger: GCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACTGAACTTCTTGGCTTaGACAACTTGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLNFLA*TTCPCH
Trigger: GTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCTGAACTTCTTGGCTTaGACAACTTGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMLNFLA*TTCPCH
Trigger: GTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GTACCCGTAATCCCCAACCTGATTACAGGCTGTTTGTCCACTATTTTTCCATCTGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: VPVIPNLITGCLSTIFPSEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...AGATGGAAAAATAGTGGACAAACAGCCTGTAATCAGGTTGGGGATTACGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAACTGGGATGTTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSNWDVW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAACATCCCAGTT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAACTGGGATGTTTGGTaGCTTCGCACACCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFNWDVW*LRTPRG
Trigger: GCCCCGAGGTGTGCGAAGCCACCAAACATCCCAGTT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAAGGACACTGGTAACTaGGATGTTTGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTKDTGN*DVWWLR
Trigger: GCGAAGCCACCAAACATCCCAGTTACCAGTGTCCTT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGAAGGACACTGGTAACTaGGATGTTTGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMKDTGN*DVWWLR
Trigger: GCGAAGCCACCAAACATCCCAGTTACCAGTGTCCTT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTTTGTTCCTTGTTGGTAAGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: VCSLLVSIQKMADSGDFTRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...AGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ACTTGTGGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: TCGYDCAESGCLLPELHCQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...GCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACCACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTATGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCCTCCTCCAGGGCTTaGTGGGCTTGCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFSSSRA*WACSRV
Trigger: TACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GTACCCGTAATCCCCAACCTGATTACAGGCTGTTTGTCCACTATTTTTCCATCTCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: VPVIPNLITGCLSTIFPSPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...AGATGGAAAAATAGTGGACAAACAGCCTGTAATCAGGTTGGGGATTACGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ACTTGTGGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: TCGYDCAESGCLLPELHCLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...GCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCACCATGGGCTAGCCTaGGTACTAAGGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSHHGLA*VLREAV
Trigger: AACTGCCTCCCTTAGTACCCAGGCTAGCCCATGGTG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACGCAAATCCGCAGCTTaGGTCGCTCATGTCTACCTG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLRKSAA*VAHVYL
Trigger: CAGGTAGACATGAGCGACCCAAGCTGCGGATTTGCG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000509901.5
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAGTCTTTGCCTTGGCGTaGCTGGAAATATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTVFALA*LEISGR
Trigger: TCTCCCTGATATTTCCAGCCACGCCAAGGCAAAGAC...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAAGGACACTGGTAACTaGGATGTCCACGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRKDTGN*DVHAAA
Trigger: GGCTGCGGCGTGGACATCCCAGTTACCAGTGTCCTT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513574.1
3UTR CAA 72 bp CCAGAATGTACTATGCACCCTCAAGACCCCATCTCTTaGTGTGCTGATTTATTTTCCTGGACCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PECTMHPQDPIS*CADLFSWTMSF
Trigger: GAAGGACATGGTCCAGGAAAATAAATCAGCACACAAAGAGATGGGGTCTTGAGGGTGCATAGTACATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQREQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGAGCAGCTGCCTTTATaGTGCCGGGAAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFEQLPL*CREESG
Trigger: CCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: YDCAESGCLLPELHCSVLKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...TAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGTGAATTGGGATGTCTaGGAGGTAGAGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRVNWDV*EVEPSS
Trigger: GGACGAGGGCTCTACCTCTCAGACATCCCAATTCAC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTTCTTCAGGCCATCTTaGGCTCGGGCTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFFFRPS*ARACSP
Trigger: AGGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGTAATGAATATCCCTaGTGTCACCATGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSNEYP*CHHGLA
Trigger: GGCTAGCCCATGGTGACATCAGGGATATTCATTACT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAGTAATGAATATCCCTaGTGTCACCATGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTSNEYP*CHHGLA
Trigger: GGCTAGCCCATGGTGACATCAGGGATATTCATTACT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGTTTCCCTTTGCTTCTTaGTGCAAAGCATCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARFPFAS*CKASLE
Trigger: TTCTAAAGATGCTTTGCATCAAGAAGCAAAGGGAAA...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGGACTTCTCTAAGAACTaGGTCCCCTACTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMDFSKN*VPYFVL
Trigger: GAGCACAAAGTAGGGGACTCAGTTCTTAGAGAAGTC...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAAACTGACTCTGAGCTaGGTCCCACCCACTAGGCTC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSKLTLS*VPPTRL
Trigger: GAGCCTAGTGGGTGGGACTCAGCTCAGAGTCAGTTT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAAACTGACTCTGAGCTaGGTCCCACCCACTAGGCTC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRKLTLS*VPPTRL
Trigger: GAGCCTAGTGGGTGGGACTCAGCTCAGAGTCAGTTT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTACTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: YDCAESGCLLPELHCSVLLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...TAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAAGCATGGTGATGACCTaGAGCGGTGAGCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIISMVMT*SGEHWE
Trigger: CTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTCCAGCTCTCCACACTaGTGGTCGAAGCGAGTGTAC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSSSSPH*WSKRVY
Trigger: GTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTGTTCCAAGTGTGCCTaGACGTGTGTTTACGTGTGT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTCSKCA*TCVYVC
Trigger: ACACACGTAAACACACGTGCAGGCACACTTGGAACA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATTTCCAGGCTGCTCGCTaGTCTAGCGCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDFQAAR*SSAGKV
Trigger: CACTTTTCCTGCGCTAGAGCAGCGAGCAGCCTGGAA...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATTCCAGGCTGCTCGCTaGTCTAGCGCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLFQAAR*SSAGKV
Trigger: CACTTTTCCTGCGCTAGAGCAGCGAGCAGCCTGGAA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCTTCCAGGCTGCTCGCTaGTCTAGCGCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGFQAAR*SSAGKV
Trigger: CACTTTTCCTGCGCTAGAGCAGCGAGCAGCCTGGAA...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAGTCCTTCCCCTTCTCTaGTTGATGAACTCTAAGACC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTVLPLL*LMNSKT
Trigger: GGTCTTAGAGTTCATCAAGCAGAGAAGGGGAAGGAC...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAAGAGAACTGCACTTTaGTACCGTCTCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMKRTAL*YRLCST
Trigger: AGTGCTGCAGAGACGGTAGCAAAGTGCAGTTCTCTT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGGTAACTGGGATGTTTaGTGGCTTCGCACACCTCGG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRGNWDV*WLRTPR
Trigger: CCGAGGTGTGCGAAGCCACCAAACATCCCAGTTACC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAAAGGACACTGGTAACTaGGATGTTTGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILRKDTGN*DVWWLR
Trigger: GCGAAGCCACCAAACATCCCAGTTACCAGTGTCCTT...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTAAGTTGTTGGGCTGACATTGATTTTTCGTGGTACACTGCAGGACTCAAATTTGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: VSCWADIDFSWYTAGLKFASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...AAATTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTCAGCCCAACAACTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTATTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGCTGGGGGACAGGGATaGCTTGGTGCTTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLAGGQG*LGAFHV
Trigger: CACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTACCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATGCAGCGGTGAGCACTaGGAGCAGATGGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIICSGEH*EQMAVN
Trigger: GTTCACTGCCATCTGCTCCCAGTGCTCACCGCTGCA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: SIQKMADSGDFTREVWWKDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCACCATGGGCTAGCCTaGGTACTAAGGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRHHGLA*VLREAV
Trigger: AACTGCCTCCCTTAGTACCCAGGCTAGCCCATGGTG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCACCATGGGCTAGCCTaGGTACTAAGGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFHHGLA*VLREAV
Trigger: AACTGCCTCCCTTAGTACCCAGGCTAGCCCATGGTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLSLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCGCAAATCCGCAGCTTaGGTCGCTCATGTCTACCTG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSRKSAA*VAHVYL
Trigger: CAGGTAGACATGAGCGACCCAAGCTGCGGATTTGCG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000509901.5
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTTTTCCTGCTTCTTaGCAATGGCTGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLFPAS*QWLLCC
Trigger: GCAGCAGAGCAGCCATTGCCAAGAAGCAGGAAAAAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATCCAGGGTCTCTACTCTaGCTACCATCAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYPGSLL*LPSVVW
Trigger: CCAGACCACTGATGGTAGCCAGAGTAGAGACCCTGG...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSDSLGT*PGASKE
Trigger: CTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTCCTGCTGCCTCCTCTaGAGACTCGTTAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSCCLL*RLVRNL
Trigger: CAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAGGGAGCAGATGGCAGTaGACCCAACGATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIGSRWQ*TQRCLR
Trigger: TCTCAGACATCGTTGGGTTCACTGCCATCTGCTCCC...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCTTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFILEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGGTGGGTCCCCTGGATaGTTACTTTACTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSGGSPG*LLYSHV
Trigger: AACATGGGAGTAAAGTAATCATCCAGGGGACCCACC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGACTCGTTAGGAACTTaGCTTGGTGGCTTCGCACAC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRDSLGT*LGGFAH
Trigger: GTGTGCGAAGCCACCAAGTCAAGTTCCTAACGAGTC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393832.7
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTGTGTCTCCCTCTTTaGTCACCCCAAAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRLCLPL*SPQRNP
Trigger: AGGGTTCCTTTGGGGTGATCAAAGAGGGAGACACAG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSCLLPC*DLLLMS
Trigger: GCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFWCLLP*CDLLLM
Trigger: CATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATGGGCACGGTTGCTTTaGAGCTCTCTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIWARLL*SSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFIQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCCTGCCCCTTTTTCCTaGTTCTTGGCAATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGPAPFS*FLAMAA
Trigger: AGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGG...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGGCGTCCTCAAGCCTaGCCCTTTTTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRRRPQA*PFFLLL
Trigger: AAGAAGCAGGAAAAAGGGGCAGGCTTGAGGACGCCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAACGGAGTACAACAAGTAGGGCTGATTCACAAACTCGCTGCAATCATTATGGAGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ERSTTSRADSQTRCNHYGGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...TCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ACTTGTGGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: TCGYDCAESGCLLPELHCTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...GCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACCACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTGAACTTCTTGGCTTaGACAACTTGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLNFLA*TTCPCH
Trigger: GTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILREASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCATCTTCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: LDRFSMGRHNFIRELHHLLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...AAGATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCCAGACAGTCCTCCTTaGCTTTGTCTCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNPDSPP*LCLSVS
Trigger: AGACACAGAGAGACAAAGGCAAGGAGGACTGTCTGG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTTCTTGGCAATGGCTaGTCTGCTGCAACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFLLGNG*SAATAC
Trigger: GCAAGCAGTTGCAGCAGAGCAGCCATTGCCAAGAAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGTCCAGAATGTACTATaGACCCTCAAGACCCCATCT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNVQNVL*TLKTPS
Trigger: AGATGGGGTCTTGAGGGTGCATAGTACATTCTGGAC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATATCGCAAGGCGTCTCTaGCCTCCCACCTCTCATATA +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYIARRL*PPTSHI
Trigger: TATATGAGAGGTGGGAGGGCAGAGACGCCTTGCGAT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTAAGATTTGGGCATTATaGAAAGTCATTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCKIWAL*KVIFSQ
Trigger: TTGGCTGAAAATGACTTTGCATAATGCCCAAATCTT...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAGCAGTGTCTGGATGCTaGACATCCCTGTATCACTGG +
Preference number: 4 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQAVSGC*TSLYHW
Trigger: CCAGTGATACAGGGATGTGCAGCATCCAGACACTGC...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTCCACCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTSTCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGTGGA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATCCACCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSTCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGTGGA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACTCTGCACTGAAACCTaGTTCTGGAAAACTGACTCT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLCTET*FWKTDS
Trigger: AGAGTCAGTTTTCCAGAAGCAGGTTTCAGTGCAGAG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAAGGACACTGGTAACTaGGATGTTTGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKKDTGN*DVWWLR
Trigger: GCGAAGCCACCAAACATCCCAGTTACCAGTGTCCTT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGCTTCGTGCAGAACATaGTGTTGGTGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKASCRT*CWCLLP
Trigger: GGGTAAGAGACACCAACACCATGTTCTGCACGAAGC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILRRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp TCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SHLDRFSMGRHNFIRELHQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...ATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAATATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATATCCAGGCATAGAATaGAGGCGTCCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLYPGIE*RRPQAC
Trigger: GCAGGCTTGAGGACGCCTCCATTCTATGCCTGGATA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGGGACAGGGATGGCTTaGTGCTTTTCATGTGAACGG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRGTGMA*CFSCER
Trigger: CCGTTCACATGAAAAGCACCAAGCCATCCCTGTCCC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCTGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: IQKMADSGDFTREVWWKFDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATACCAATGTCCTTTATaGTGGGTCCCCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTYQCPL*WVPWMI
Trigger: AATCATCCAGGGGACCCACCATAAAGGACATTGGTA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCCCTGATGTCACCATaGGCTAGCCTGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFSLMSP*ASLGTK
Trigger: CTTAGTACCCAGGCTAGCCCATGGTGACATCAGGGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGGGCCTTTGTAGGCTaGTCTGGGGAACCTATCACA +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFWAFVG*SGEPIT
Trigger: TGTGATAGGTTCCCCAGACCAGCCTACAAAGGCCCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCTCATCCCAGGTAACTaGCTGTCCAGAATGTACTAT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTLIPGN*LSRMYY
Trigger: ATAGTACATTCTGGACAGCCAGTTACCTGGGATGAG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTTGCCTTGGCGTGGCTaGAAATATCAGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLPWRG*KYQGEE
Trigger: TTCTTCTCCCTGATATTTCCAGCCACGCCAAGGCAA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGACTGAAACCTGCTTCTaGAAAACTGACTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMTETCF*KTDSEL
Trigger: CAGCTCAGAGTCAGTTTTCCAGAAGCAGGTTTCAGT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
3UTR CAA 72 bp TCAGTACCCGTAATCCCCAACCTGATTACAGGCTGTTaGTCCACTATTTTTCCATCTTCAATACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVPVIPNLITGC*STIFPSSIPQS
Trigger: GCTTTGAGGTATTGAAGATGGAAAAATAGTGGACAAACAGCCTGTAATCAGGTTGGGGATTACGGGTACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 72 bp TTAAAGCATTATACAGCACTAGACTTCACTGGAGCTTaGCATGTAAAGCTCCATCTGGGCAGTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKHYTALDFTGA*HVKLHLGSFPA
Trigger: AGCTGGAAAACTGCCCAGATGGAGCTTTACATGCAAAGCTCCAGTGAAGTCTAGTGCTGTATAATGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAAGATTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GTLQDSNLLARVTLFPKRFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...TCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGTATTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LHCSVLVDVRTPINILRVFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...TACTCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGATGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILRCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCTGTCCACACAGGGTaGCCCCAAAAACAAGATTGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFSVHTG*PQKQDC
Trigger: GCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATCCCTCAGTGCATTGTaGATTGGGATGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLSLSAL*IGMSER
Trigger: CCTCTCAGACATCCCAATTCACAATGCACTGAGGGA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGACGCCAGCAAAAACTaGTCCAGAGTGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLDASKN*SRVQSN
Trigger: ATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTGGAAGTTCCTCCCTTaGTCGAGGGGTAAACACGAA +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYWKFLP*SRGKHE
Trigger: TTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: IQKMADSGDFTREVWWKFAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGGTGGGTCCCCTGGATaGTTACTTTACTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLGGSPG*LLYSHV
Trigger: AACATGGGAGTAAAGTAATCATCCAGGGGACCCACC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGTAATGAATATCCCTaGTGTCACCATGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSNEYP*CHHGLA
Trigger: GGCTAGCCCATGGTGACATCAGGGATATTCATTACT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGTAATCTCAGAGGACTaGTGTCTATTCCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLVISED*CLFLRH
Trigger: GTGCCTGAGGAATAGACATCAGTCCTCTGAGATTAC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACCGTCTCTGCAGCACTaGATTTCTGTTTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLPSLQH*ISVLEE
Trigger: CTCCTCCAAAACAGAAATTCAGTGCTGCAGAGACGG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCCTGCAGTGTACTAGTTaGTGTCAGAACACCTATCAA +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLLQCTS*CQNTYQ
Trigger: TTGATAGGTGTTCTGACATCAACTAGTACACTGCAG...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAAAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACACTGGAACTCCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLHWNSC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPATRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCTGAACTTCTTGGCTTaGACAACTTGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGLNFLA*TTCPCH
Trigger: GTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAG...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTGAACTTCTTGGCTTaGACAACTTGCCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFLNFLA*TTCPCH
Trigger: GTGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAAAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACCAGACAGTCCTCCTTaGCTTTGTCTCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLPDSPP*LCLSVS
Trigger: AGACACAGAGAGACAAAGGCAAGGAGGACTGTCTGG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCCAGACAGTCCTCCTTaGCTTTGTCTCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSPDSPP*LCLSVS
Trigger: AGACACAGAGAGACAAAGGCAAGGAGGACTGTCTGG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000455639.6
ENST00000509901.5
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCCCACCTCTCATATATaGTGTGTTCTCCATCCCTGC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRPTSHI*CVLHPC
Trigger: GCAGGGATGGAGAACACAGCATATATGAGAGGTGGG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCTTTGCTACCGTCTCTaGAGCACTGAATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMLCYRL*STEFLF
Trigger: AAACAGAAATTCAGTGCTGCAGAGACGGTAGCAAAG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGAGCTTCAGTTTTGCTaGTCTTGTTCCAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTELQFC*SCSRCI
Trigger: TATACACCTGGAACAAGAGCAGCAAAACTGAAGCTC...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAAAGAGCTTCAGTTTTaGTGCTCTTGTTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMKELQF*CSCSRC
Trigger: ACACCTGGAACAAGAGCAGCAAAACTGAAGCTCTTT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGATGGTCTCCACCTGCTaGAACTGCTTGCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRMVSTC*NCLLCN
Trigger: ATTGCAGAGCAAGCAGTTGCAGCAGGTGGAGACCAT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAAGGACACTGGTAACTaGGATGTTTGGTGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRKDTGN*DVWWLR
Trigger: GCGAAGCCACCAAACATCCCAGTTACCAGTGTCCTT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000509901.5
ENST00000515201.5
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATGCAGAACATGGTGTTaGTGTCTCTTACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLCRTWC*CLLPCC
Trigger: GCAGCAGGGTAAGAGACACCAACACCATGTTCTGCA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFECLDR*ARLLCS
Trigger: GCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSRLGSD*FFFEED
Trigger: GTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTGCAGAATAGCGATGTaGGAATCACCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYCRIAM*ESPART
Trigger: AGTCCTCGCTGGTGATTCCCACATCGCTATTCTGCA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAAGCTCTCCACACTGCTaGTCGAAGCGAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIISSPHC*SKRVYS
Trigger: ACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGAGATGTCTGCTGAAGTaGGTCCATATTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMRCLLK*VHIVPS
Trigger: ACTTGGAACAATATGGACCCACTTCAGCAGACATCT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTCTGGCTACCATCAGTaGTCTGGATCTGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTSGYHQ*SGSEKF
Trigger: AAACTTTTCAGATCCAGACCACTGATGGTAGCCAGA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACACTGAAACCTGCTTCTaGAAAACTGACTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNTETCF*KTDSEL
Trigger: CAGCTCAGAGTCAGTTTTCCAGAAGCAGGTTTCAGT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
3UTR CAA 72 bp CTGCTTTGGGCGACTAACATTTGCATCAACAAGGGCTaGATTGTGGATTTAAAGCATTATACAGCACTAGAC +
Preference number: 4 (lower is better)
Translates to: LLWATNICINKG*IVDLKHYTALD
Trigger: GTCTAGTGCTGTATAATGCTTTAAATCCACAATCAAGCCCTTGTTGATGCAAATGTTAGTCGCCCAAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 72 bp AACTACCTCATAGCTCTTTCCTCAATACAGATGGATTaGGCAGCATTTCAGATGGAACAAACATCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NYLIALSSIQMD*AAFQMEQTSEQ
Trigger: CTGCTCAGATGTTTGTTCCATCTGAAATGCTGCCAAATCCATCTGTATTGAGGAAAGAGCTATGAGGTAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAGTAATGAATATCCCTaGTGTCACCATGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSSNEYP*CHHGLA
Trigger: GGCTAGCCCATGGTGACATCAGGGATATTCATTACT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTACACATACCCCTTCGTaGTTTTTGCCCAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFTHTPS*FLPRWS
Trigger: AGACCATCTGGGCAAAAATCACGAAGGGGTATGTGT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACCAACCACCTAAAGAGTaGAATTGCATTGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHQPPKE*NCIEVQ
Trigger: TTGCACTTCAATGCAATTTCACTCTTTAGGTGGTTG...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCCACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTPLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTGG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509901.5
CDS-3UTR GCA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATATTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: LPELHCSVLVDVRTPINIFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCACAGGGATGGCTTGGTaGTTTTCATGTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGTGMAW*FSCERS
Trigger: ACTCCGTTCACATGAAAAGCACCAAGCCATCCCTGT...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSEASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGAAGCGAGTGTACAGTaGATTGAGCATGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQREASVQ*IEHGDD
Trigger: GTCATCACCATGCTCAATGCACTGTACACTCGCTTC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GTAAGTTGTTGGGCTGACATTGATTTTTCGTGGTACACTGCAGGACTCAAATTTAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: VSCWADIDFSWYTAGLKFKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...AAATTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTCAGCCCAACAACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAAGACTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: GTLQDSNLLARVTLFPKRLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...TCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTGTTCCAAGTGTGCCTaGACGTGTGTTTACGTGTGT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSCSKCA*TCVYVC
Trigger: ACACACGTAAACACACGTGCAGGCACACTTGGAACA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTGTTCCAAGTGTGCCTaGACGTGTGTTTACGTGTGT +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYCSKCA*TCVYVC
Trigger: ACACACGTAAACACACGTGCAGGCACACTTGGAACA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTTGATAACCTCCACTaGAACTCCTGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSFDNLH*NSCCNC
Trigger: GCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCCTCACAGGGAAATATaGAGCACAGAAGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFPHREI*STEGLL
Trigger: CAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCAATGTCCTTTATGGTaGGTCCCCTGGATGATTACT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKQCPLW*VPWMIT
Trigger: AGTAATCATCCAGGGGACCCACCATAAAGGACATTG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTACCAATGTCCTTTATaGTGGGTCCCCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNYQCPL*WVPWMI
Trigger: AATCATCCAGGGGACCCACCATAAAGGACATTGGTA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACGCTGATTTATTTTCCTaGACCATGTCCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNADLFS*TMSFPF
Trigger: GAAGGGGAAGGACATGGTCCAGGAAAATAAATCAGC...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAACAATACAGATGGATTTaGCAGCATTTCAGATGGAAC +
Preference number: 4 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKQYRWI*QHFRWN
Trigger: GTTCCATCTGAAATGCTGCCAAATCCATCTGTATTG...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTACTACCTGTAAGTTGTTaGGCTGACATTGATTTTTCG +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILLPVSC*ADIDFS
Trigger: CGAAAAATCAATGTCAGCCCAACAACTTACAGGTAG...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTTGCCAATGTTCTCTaGAGTGCAACATTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSFANVL*SATFSR
Trigger: ACGGCTGAATGTTGCACTTCAGAGAACATTGGCAAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTGTTCATCAGCCTTCTaGTGCCATTGCCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSCSSAF*CHCQIA
Trigger: TGCAATTTGGCAATGGCATCAGAAGGCTGATGAACA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATGGCTTTCAGTAATTaGTTCTTCCCCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMMAFSN*FFPFSL
Trigger: TAGTGAAAAGGGGAAGAATCAATTACTGAAAGCCAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCTGTATCACTGGGAATaGTTATTTCTAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSLYHWE*LFLKAQ
Trigger: CTGGGCCTTTAGAAATAATCATTCCCAGTGATACAG...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAGTGCTCTAGGGCAGTaGACATCAAGTTCTCATATT +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSSALGQ*TSSSHI
Trigger: AATATGAGAACTTGATGTTCACTGCCCTAGAGCACT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAGGAAAACTCTGCACTaGAACCTGCTTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRRKTLH*NLLLEN
Trigger: GTTTTCCAGAAGCAGGTTTCAGTGCAGAGTTTTCCT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCGTGGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAATTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: SWYTAGLKFVSQSDIVSKFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...TTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGACAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ELHCSVLVDVRTPINILRQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCTGCTCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSLLCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGAGCAG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTGTGTTCTCCATCCCTaGACCCTTAAAGACAGTCTT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSCVLHP*TLKDSL
Trigger: AAGACTGTCTTTAAGGGTGCAGGGATGGAGAACACA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGCTAGTCAAAACAGATaGAGGTGTGGCTGTAATAAG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLASQNR*RCGCNK
Trigger: CTTATTACAGCCACACCTGCATCTGTTTTGACTAGC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAATAGGCATCGCCAATaGTCTCCACCTTGTAGACAT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSNRHRQ*SPPCRH
Trigger: ATGTCTACAAGGTGGAGACCATTGGCGATGCCTATT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTATGGTGGGTCCCCTaGATGATTACTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSLWWVP*MITLLP
Trigger: TGGGAGTAAAGTAATCATCCAGGGGACCCACCATAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTACCAATGTCCTTTATaGTGGGTCCCCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSYQCPL*WVPWMI
Trigger: AATCATCCAGGGGACCCACCATAAAGGACATTGGTA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCAGATGTCTGCTGAAGTaGGTCCATATTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLRCLLK*VHIVPS
Trigger: ACTTGGAACAATATGGACCCACTTCAGCAGACATCT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTGGCAGCATTTCAGATaGAACAAACATCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLWQHFR*NKHLSR
Trigger: TCTGCTCAGATGTTTGTTCCATCTGAAATGCTGCCA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAAGGACACTGGTAACTaGGATGTCATTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFKDTGN*DVIVTV
Trigger: GACAGTGACAATGACATCCCAGTTACCAGTGTCCTT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAAGGACACTGGTAACTaGGATGTCATTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSKDTGN*DVIVTV
Trigger: GACAGTGACAATGACATCCCAGTTACCAGTGTCCTT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
3UTR CAA 72 bp ACTTTAATAACCATGGCATTCCACCAGGATATGAGATaGCAGGTGACTCCATCAGTTTGTACAATTGACTAC +
Preference number: 4 (lower is better)
Translates to: TLITMAFHQDMR*QVTPSVCTIDY
Trigger: GTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTGGTGGAATGCCATGGTTATTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTCTACACATCTTCAATaGGTCAAACCCCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLSTHLQ*VKPQRL
Trigger: AAGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCATAGAAGATGTCTGCTaGAGTGGGTCCATATTGTTC +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSIEDVC*SGSILF
Trigger: GAACAATATGGACCCACTTCAGCAGACATCTTCTAT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAATACCTCAAAGCTCTaGCTTGGGCCCCTTATTTAT +
Preference number: 4 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQNTSKL*LGPLIY
Trigger: ATAAATAAGGGGCCCAAGTCAGAGCTTTGAGGTATT...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTAACTCTGTGCTTGCCTaGGAAATATGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSNSVLA*EICIRR
Trigger: TCTCCTTATACATATTTCTCAGGCAAGCACAGAGTT...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTACTTGTCTGTATGTaGAACCCCATGAATCATTTT +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNLLVCM*NPMNHF
Trigger: AAAATGATTCATGGGGTTTCACATACAGACAAGTAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
ENST00000511108.5
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAACTCCTGCTGCAACTaGTTGCTCTGCAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSNSCCN*LLCNCF
Trigger: AAAACAATTGCAGAGCAAGCAGTTGCAGCAGGAGTT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGATTCACAAACTCGCTaGAATCATTATGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFDSQTR*NHYGSR
Trigger: CCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGGAATGGAAATGTCTTaGAGAATAGCGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLGMEMS*RIAMWE
Trigger: TTCCCACATCGCTATTCTGCAAGACATTTCCATTCC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: PSTIPKVLSEALHIFNESMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: PELHCSVLVDVRTPINILMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR GCA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: STIPKVLSEALHIFNESNPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAAAACTGATCCAGAGTaGAGTCCAATTCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFKTDPE*SPIRIL
Trigger: CAAGATGCGAATTGGACTGCACTCTGGATCAGTTTT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACTACAATCCCTAAAGTaGTTTCAGAGGCTCTACACA +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLLQSLK*FQRLYT
Trigger: TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATATATTGTTCCAAGTGTaGCTGCACGTGTGTTTACGT +
Preference number: 4 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDILFQV*LHVCLR
Trigger: ACGTAAACACACGTGCAGGCACACTTGGAACAATAT...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAATGGGCGACTAACATTTaGATCAACAAGGGCTTGATT +
Preference number: 4 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQWATNI*INKGLI
Trigger: AATCAAGCCCTTGTTGATGCAAATGTTAGTCGCCCA...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTTCGTTAACCCATTCTaGTTTGGGCGACTAACATTT +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLFVNPF*FGRLTF
Trigger: AAATGTTAGTCGCCCAAAGCAGAATGGGTTAACGAA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATTCCCAGACCACTGTTaGCATAACTTTCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIFPDHC*HNFPKS
Trigger: GCTCTTTGGAAAGTTATGGCAACAGTGGTCTGGGAA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATATCCCGCTAAACGTCTaGTTGATTTTTGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYIPLNV*LIFGVR
Trigger: TCTGACTCCAAAAATCAACCAGACGTTTAGCGGGAT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTTTCTCAAGGCCTATaGCACTTTCCAATAATAGGC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFLSQGL*HFPIIG
Trigger: GCCTATTATTGGAAAGTGCCATAGGCCTTGAGAAAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CCA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATTGTGAATTTCGTATaGACTCTGTCATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMIVNFV*TLSWKC
Trigger: ACATTTCCATGACAGAGTCCATACGAAATTCACAAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCCATATGCACATTTTTaGAGGGGTGATAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSPYAHF*RGDSLC
Trigger: ACATAGACTATCACCCCTCCAAAAATGTGCATATGG...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 72 bp ATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTaGCTTCCAGCTAAATTAGATTTGAATAGTATTACT +
Preference number: 4 (lower is better)
Translates to: MVGPLDDYFTPM*LPAKLDLNSIT
Trigger: AGTAATACTATTCAAATCTAATTTAGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
3UTR CAA 72 bp TCTCCTGTTCATCAGCCTTCTGATGCCATTGCCAAATaGCAGAATTGTCATATCTTTGTCAAACATGAAATG +
Preference number: 4 (lower is better)
Translates to: SPVHQPSDAIAK*QNCHIFVKHEM
Trigger: CATTTCATGTTTGACAAAGATATGACAATTCTGCAATTTGGCAATGGCATCAGAAGGCTGATGAACAGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCGACTGGTTTTTCTTTaGGGAAGACTTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRRLVFL*GRLSCM
Trigger: CATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR TCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGAAATTAGGCTTTCCTTaGAAGTCTCTCCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRKLGFP*KSLLFI
Trigger: GATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRLEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR TCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGGAACCTATCACAGATaGTTTAACTTCACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLGTYHR*FNFTVK
Trigger: TTTCACAGTGAAGTTAAATCATCTGTGATAGGTTCC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTGTTTTCACTTTCTCTaGAACTACCTCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNCFHFL*NYLIAL
Trigger: AAGAGCTATGAGGTAGTTTCAGAGAAAGTGAAAACA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGTATGTGAAACCCCATaGATCATTTTACACATCAGG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSVCETP*IILHIR
Trigger: CCTGATGTGTAAAATGATTCATGGGGTTTCACATAC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTATTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRLGKSV*KYSLPK
Trigger: CTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAATGTTCTCTGAAGTaGAACATTCAGCCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFQCSLK*NIQPFK
Trigger: TTTGAACGGCTGAATGTTGCACTTCAGAGAACATTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: CDLAPEILILLVSHLQSLPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: DCDLAPEILILLVSHLQSPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTTATTTTAAGAATCTATaGTCCAGGGTCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSYFKNL*SRVSTL
Trigger: CAGAGTAGAGACCCTGGAGCATAGATTCTTAAAATA...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACAGAAAGAATAGCTCCTaGATTTTCAGGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNRKNSS*IFRRNS
Trigger: ACTGTTTCTCCTGAAAATGCAGGAGCTATTCTTTCT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCATTCTCATAGACTTTaGAACTCAGCCAGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSHSHRL*NSARSK
Trigger: TTTACTTCTGGCTGAGTTGCAAAGTCTATGAGAATG...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAGCCGTTCAAACTCTaGGAAAATCAGTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLQPFKL*ENQFAN
Trigger: ATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTGATAGGTTCTCCATaGGGAGACATAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSLIGSP*GDITSS
Trigger: TGATGAAGTTATGTCTCCCCATGGAGAACCTATCAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGACATTGATTTTTCGTaGTACACTGCAGGACTCAAA +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSDIDFS*YTAGLK
Trigger: TTTGAGTCCTGCAGTGTACCACGAAAAATCAATGTC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
3UTR CAA 72 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTaGGGCATTATGCAAAGTCATTTTCAGCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: QMEQTSEQILQD*GIMQSHFQPSN
Trigger: ATTACTTGGCTGAAAATGACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
3UTR CAA 72 bp TGCTGCTCTTGTTCCAGGTGTATAATACTTAACACATaGGGCTGTCCAACTTCTGTAATAGCATTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CCSCSRCIILNT*GCPTSVIAFLF
Trigger: AAACAAAAATGCTATTACAGAAGTTGGACAGCCCAATGTGTTAAGTATTATACACCTGGAACAAGAGCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR TCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAGTTTCATATAATACGTaGGCAGCTGCCTTTATGATG +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIVSYNT*AAAFMM
Trigger: CATCATAAAGGCAGCTGCTCACGTATTATATGAAAC...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATTGGAAGCATGGTTTTaGGTTTGTTCCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIILEAWF*VCSLLV
Trigger: TACCAACAAGGAACAAACTCAAAACCATGCTTCCAA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR TCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGGCTGAAGTACTGAAGTaGGTACATACATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRAEVLK*VHTFCH
Trigger: ATGACAAAATGTATGTACTCACTTCAGTACTTCAGC...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGAC +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFFANTL*QSVKID
Trigger: GTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR GCA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: DLAPEILILLVSHLQSLKMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR GCA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATCCCCAAAAACAAGATTaGACTGGATTCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYPQKQD*TGFNNV
Trigger: TACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGG...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR GCA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATGACATAAAATTCCAATaGCAGACATCCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDDIKFQ*QTSQLY
Trigger: ATAAAGCTGGGATGTCTGGCATTGGAATTTTATGTC...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: EKDCDLAPEILILLVSHLMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: APEILILLVSHLQSLKCFMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: KQEKDCDLAPEILILLVSTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR GCA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGACTCGTACAACAAACTaGATATTCAACATAGTCATG +
Preference number: 4 (lower is better)
Translates to: EILILLVSHLQSLKCFQRTRTTN*IFNIVM
Trigger: CATGACTATGTTGAATATGCAGTTTGTTGTACGAGT...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
3UTR CAA 72 bp TGGATTGAGAGCAGCATGTATCAGTCTATAGAGTTGTaGTCCTACAATATTTTATTAACAGATTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: WIESSMYQSIEL*SYNILLTDCRN
Trigger: ATTCCTGCAATCTGTTAATAAAATATTGTAGGACAACAACTCTATAGACTGATACATGCTGCTCTCAATCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR GCA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAATGCCATTGCCAAATTaGAGAATTGTCATATCTTTG +
Preference number: 4 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIMPLPN*RIVISL
Trigger: CAAAGATATGACAATTCTGCAATTTGGCAATGGCAT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS TCA 90 bp TCGCTTGCCTGCCGGCGCGCCGGAGGCCGCAGCGCTGCACGCGGCTaGTGGGCTCTGGGGCCCAGGCGCCCTGGCCGTGGGAGACCAGCG +
Preference number: 5 (lower is better)
Translates to: SLACRRAGGRSAARG*WALGPRRPGRGRPA
Trigger: CGCTGGTCTCCCACGGCCAGGGCGCCTGGGCCCCAGAGCCCATCAGCCGCGTGCAGCGCTGCGGCCTCCGGCGCGCCGGCAGGCAAGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS GCA 90 bp TCAGGCGACAGGGTGCAGACAGGCGCGGAGACCGCGGTGGCCCCCTaGTCACGCTTTCTCCAAGAGCCGCAGTCTTGGTGGCTTCGCACA +
Preference number: 5 (lower is better)
Translates to: SGDRVQTGAETAVAP*SRFLQEPQSWWLRT
Trigger: TGTGCGAAGCCACCAAGACTGCGGCTCTTGGAGAAAGCGTGAGCAGGGGGCCACCGCGGTCTCCGCGCCTGTCTGCACCCTGTCGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS GCA 90 bp GCCTCGCAAATCCGCACTGTTCAACAGGCTAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCCCGCGTGGCTCCCAGACAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASQIRTVQQARRDAA*LGNCIARVAPRQSS
Trigger: GGAGGACTGTCTGGGAGCCACGCGGGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCTAGCCTGTTGAACAGTGCGGATTTGCGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455639.6
CDS GCA 90 bp GGTCGCTCATGTCTACCTGTTCAACAGGCTAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCCCGCGTGGCTCCCAGACAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRSCLPVQQARRDAA*LGNCIARVAPRQSS
Trigger: GGAGGACTGTCTGGGAGCCACGCGGGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCTAGCCTGTTGAACAGGTAGACATGAGCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443668.6
ENST00000509901.5
CDS CCA 90 bp TCTAAGCTCCTCCAGGCGCTCCCTCCCCCACAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTCGCTGCTCTAGCGCAGGAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: SKLLQALPPPQVSSA*VCSRLLAALAQEKC
Trigger: ACACTTTTCCTGCGCTAGAGCAGCGAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTGTGGGGGAGGGAGCGCCTGGAGGAGCTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GACATCCAGCTCTCCACACTGCTGGTCGAAGCGAGTGTACAGTGCATTGAGCATGTGCAGAACATGGTGTaGGTGTCTCTTACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: DIQLSTLLVEASVQCIEHVQNMV*VSLTLL
Trigger: CAGCAGGGTAAGAGACACCAACACCATGTTCTGCAC...ATGCTCAATGCACTGTACACTCGCTTCGACCAGCAGTGTGGAGAGCTGGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp ATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: IPGISLGKFGGSSSLDRGMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...CCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTCTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: DCAESGCLLPELHCSVLVLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SIQKMADSGDFTREVWWKDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LTPTTPAKTDPECSPIRIDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LPELHCSVLVDVRTPINILLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: GYDCAESGCLLPELHCSVLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...TACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SIQKMADSGDFTREVWWKLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACCAAGAGCCGCAGTCTaGGTGGCTTCGCACACCTCG +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTPRAAV*VASHTS
Trigger: CGAGGTGTGCGAAGCCACCAAGACTGCGGCTCTTGG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCTCGCAAATCCGCAGCTaGGGTCGCTCATGTCTACCT +
Preference number: 5 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFISQIRS*GRSCLP
Trigger: AGGTAGACATGAGCGACCCAAGCTGCGGATTTGCGA...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443668.6
ENST00000509901.5
CDS-3UTR CAA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTCACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: DCAESGCLLPELHCSVLVHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGCTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp CCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAGGCTGAGTGGTTTATaGAGTCAAAGTCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: PGISLGKFGGSSSLDRGVRLSGL*SQSQSC
Trigger: ACAGGACTGACTTTGACTCAATAAACCACTCAGCCT...TACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGCACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SIQKMADSGDFTREVWWKHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATAATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPELHCSVLVDVRTPINIMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCGTGGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SWYTAGLKFVSQSDIVSKDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...TTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAACTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAAAGACAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GTLQDSNLLARVTLFPKRQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...TCTTTTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATATTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: LPELHCSVLVDVRTPINILHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAACTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGGTAGCTTTAAAACTGTaGGAGAGGGAGTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWVALKL*ERESVA
Trigger: GGCTACTGACTCCCTCTCCAACAGTTTTAAAGCTAC...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGGACTTCACTGGAGCTTaGCATGTAAAGCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARDFTGA*HVKLHL
Trigger: CAGATGGAGCTTTACATGCAAAGCTCCAGTGAAGTC...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCTCGCAAATCCGCAGCTaGGGTCGCTCATGTCTACCT +
Preference number: 5 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVSQIRS*GRSCLP
Trigger: AGGTAGACATGAGCGACCCAAGCTGCGGATTTGCGA...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp TCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SHLDRFSMGRHNFIRELHHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...ATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACTCCTCCTCCAGGGCTaGGTGGGCTTGCTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLLLLQG*VGLLKG
Trigger: ACCCTTGAGCAAGCCCACCAAGCCCTGGAGGAGGAG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ACTTGTGGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCACATTACTGAACTTCTaGGCTTGCACAACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: TCGYDCAESGCLLPELHCTLLNF*ACTTCP
Trigger: AGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGT...GCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACCACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCCAAGAGCCGCAGTCTaGGTGGCTTCGCACACCTCG +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFPRAAV*VASHTS
Trigger: CGAGGTGTGCGAAGCCACCAAGACTGCGGCTCTTGG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: IQKMADSGDFTREVWWKFVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...GAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
CDS-3UTR CAA 90 bp GTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACCCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: VMTVLSLGVYCQNCTAVYPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...GTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTCTGTGTCTCCCTCTTaGATCACCCCAAAGGAACCC +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTSVSPS*ITPKEP
Trigger: GGGTTCCTTTGGGGTGATCAAAGAGGGAGACACAGA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455639.6
ENST00000509901.5
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTCCTCAAAGCTCTGACTaGGGCCCCTTATTTATTTTA +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCPQSSD*GPLFIL
Trigger: TAAAATAAATAAGGGGCCCAAGTCAGAGCTTTGAGG...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCAAGAGAACTGCACTTaGCTACCGTCTCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTQENCT*LPSLQH
Trigger: GTGCTGCAGAGACGGTAGCAAAGTGCAGTTCTCTTG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCTCGCAAATCCGCAGCTaGGGTCGCTCATGTCTACCT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSSQIRS*GRSCLP
Trigger: AGGTAGACATGAGCGACCCAAGCTGCGGATTTGCGA...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000509901.5
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCGTGGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAACACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SWYTAGLKFVSQSDIVSKHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...TTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGACAGATGGGCACGGTaGCTTTGCAGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLDRWAR*LCSSLS
Trigger: GCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GGTTATGACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: GYDCAESGCLLPELHCSVPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...TACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTCATAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPASPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000506455.6
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCTTCTTCAGGCCATCTaGAGCTCGGGCTTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFLLQAI*SSGLFP
Trigger: GGGGAACAAGCCCGAGCTCAAGATGGCCTGAAGAAG...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATACAGGGCTTGGTGGGCTaGCTCAAGGGTAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIQGLVG*LKGSLQ
Trigger: CTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTG...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRLGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: MEDYVISVMDLWLGHKHLTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...GAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTGCCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATAAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: LPELHCSVLVDVRTPINISPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...TATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GTTTGTTCCTTGTTGGTAAGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: VCSLLVSIQKMADSGDFTSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...AGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACAAGGAACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPACRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp AGCATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SIQKMADSGDFTREVWWKCRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...CTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp GGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCCTTGATCGAGGGGTAAACGGTCTGCTGAAATGTTaGATCAAGACTACATTCCAT +
Preference number: 5 (lower is better)
Translates to: GISLGKFGGSSSLDRGVNGLLKC*IKTTFH
Trigger: ATGGAATGTAGTCTTGATCAAACATTTCAGCAGACC...GTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGACTCGTTAGGAACTaGACTTGGTGGCTTCGCACA +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESRLVRN*TWWLRT
Trigger: TGTGCGAAGCCACCAAGTCAAGTTCCTAACGAGTCT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393832.7
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGTGGGAAGTCTTTGCCTaGGCGTGGCTGGAAATATCA +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMWEVFA*AWLEIS
Trigger: TGATATTTCCAGCCACGCCAAGGCAAAGACTTCCCA...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CTGAATTTCTGTTTTGGAGGAGACGGTAAGTCCCTCCTCACAGGAATCGCAAGGGGTAATGGGATAGCTTaGGATGAAAAATGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: LNFCFGGDGKSLLTGIARGNGIA*DEKCVG
Trigger: ACCTACACATTTTTCATCCAAAGCTATCCCATTACC...CCTTGCGATTCCTGTGAGGAGGGACTTACCGTCTCCTCCAAAACAGAAATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp TCGTGGTACACTGCAGGACTCAAATTTGTTAGCCAGAGTGACATTGTTTCCAAAGTAACTGGGATGTCATaGTCACTGTCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SWYTAGLKFVSQSDIVSKVTGMS*SLSGSS
Trigger: TGAGCTGCCTGACAGTGACAATGACATCCCAGTTAC...TTTGGAAACAATGTCACTCTGGCTAACAAATTTGAGTCCTGCAGTGTACCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621234.4
CDS-3UTR CAA 90 bp ACAGAGTTGTCCCATCTCCTCACTCGTACAACAAACTGCATATTCAACATAGTCGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: TELSHLLTRTTNCIFNIVVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...GACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GGAGTAGATTCTAGGGAGTTCCCCAAGCTCTGGCAGTACATGTGTCTTGTATGGTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: GVDSREFPKLWQYMCLVWLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...CCATACAAGACACATGTACTGCCAGAGCTTGGGGAACTCCCTAGAATCTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GACTGTGCTGAGTCTGGGTGTTTACTGCCAGAACTGCACTGCAGTGTACTAGTTTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: DCAESGCLLPELHCSVLVLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...AACTAGTACACTGCAGTGCAGTTCTGGCAGTAAACACCCAGACTCAGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TTAACTCCAACGACGCCAGCAAAAACTGATCCAGAGTGCAGTCCAATTCGCATCTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LTPTTPAKTDPECSPIRISGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...GATGCGAATTGGACTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443668.6
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCTGAAGTGGGTCCATATTGTTCCAAGTGTGCCTGCACGTGTGTTTACGTGTGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: LLKWVHIVPSVPARVFTCDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...ACACGTAAACACACGTGCAGGCACACTTGGAACAATATGGACCCACTTCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPANNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTTGCACAACTTGCCCTaGCCACAGCTGCTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSLHNLP*PQLLSN
Trigger: GTTGCTCAGCAGCTGTGGCAAGGGCAAGTTGTGCAA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATACTTGGCTTGCACAACTaGCCCTTGCCACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIILGLHN*PLPQLL
Trigger: CAGCAGCTGTGGCAAGGGCAAGTTGTGCAAGCCAAG...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS GCA 90 bp ATTCAGCCGTTCAAACTCTGGGAAAATCAGTTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGACTCGGCTCCGACTGGTTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: IQPFKLWENQFANTL*QSVKIDSAPTGFSL
Trigger: CAAAGAAAAACCAGTCGGAGCCGAGTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTAGTGCAGAACATGGTGTaGGTGTCTCTTACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLVQNMV*VSLTLL
Trigger: CAGCAGGGTAAGAGACACCAACACCATGTTCTGCAC...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGTAGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: LHCSVLVDVRTPINILRVVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...TACTCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAATGGGCACGGTTGCTTaGCAGCTCTCTGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIMGTVA*QLSELP
Trigger: AGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCAT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTTCTCAGGAATGTCTaGACAGATGGGCACGGTTGC +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRLLRNV*TDGHGC
Trigger: GCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPALRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp AGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCCTCCTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RKWQIPGISLGKFGGSSSLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...GGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: GRLCNICHGFMAGPQTPQSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...CTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTTGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: SHLDRFSMGRHNFIRELHTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...ATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAACATTACTGAACTTCTaGGCTTGCACAACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESTLLNF*ACTTCP
Trigger: AGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGGCTGAGTGGTTTATaGAGTCAAAGTCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMRLSGL*SQSQSC
Trigger: ACAGGACTGACTTTGACTCAATAAACCACTCAGCCT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTCAGATTGTAAGCAAATaGAGGTCTGCTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAQIVSK*RSAEMF
Trigger: AAACATTTCAGCAGACCTCAATTTGCTTACAATCTG...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTCTGTGTCTCCCTCTTaGATCACCCCAAAGGAACCC +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSVSPS*ITPKEP
Trigger: GGGTTCCTTTGGGGTGATCAAAGAGGGAGACACAGA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455639.6
ENST00000509901.5
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACAGTTCTTATATGAGATaGGTGGCTTCGCACACCTCG +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNSSYMR*VASHTS
Trigger: CGAGGTGTGCGAAGCCACCAATCTCATATAAGAACT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455639.6
CDS-3UTR CAA 90 bp TCCTTTATGGTGGGTCCCCTGGATGATTACTTTACTCCCATGTTGCTTCCAGCTATTCTGTATTTCCCTTaGCTTCTTGATGCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: SFMVGPLDDYFTPMLLPAILYFP*LLDAKH
Trigger: ATGCTTTGCATCAAGAAGCAAAGGGAAATACAGAAT...AGCTGGAAGCAACATGGGAGTAAAGTAATCATCCAGGGGACCCACCATAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTACTGAGTCCCCTACTTaGTGCTCCCACAGAATGTTG +
Preference number: 5 (lower is better)
Translates to: QMEQTSEQILQDLGIMQSTESPT*CSHRML
Trigger: CAACATTCTGTGGGAGCACAAAGTAGGGGACTCAGT...ACTTTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGATTCATCTCTTTCATTaGCTAGGCCTACCACAGACC +
Preference number: 5 (lower is better)
Translates to: VSHLQSLKCFQRLYTSSMIHLFH*LGLPQT
Trigger: GGTCTGTGGTAGGCCTAGCAAATGAAAGAGATGAAT...CATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp TGTAGGTTATGTGGGCTAGTCAAAACAGATGCAGGTGTGGCTGTAATAAGCAAACAGGAATCTAAAAGGTaGGAGAATAGTGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: CRLCGLVKTDAGVAVISKQESKR*ENSALG
Trigger: CCCTAGAGCACTATTCTCCAACCTTTTAGATTCCTG...TTTGCTTATTACAGCCACACCTGCATCTGTTTTGACTAGCCCACATAACCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGGTAACTGGGATGTCATaGTCACTGTCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKVTGMS*SLSGSS
Trigger: TGAGCTGCCTGACAGTGACAATGACATCCCAGTTAC...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAACACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATCACTCTCCTGTGATCTaGAGATCCTTGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYHSPVI*RSLSFV
Trigger: CACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTG...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATCCAGAAAATGGCAGATTCCGGGGATTTCACTAGGGAAGTTTGGTGGAAGTTCTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: IQKMADSGDFTREVWWKFLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...GAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFILRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443668.6
ENST00000509901.5
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: ELHCSVLVDVRTPINILRSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GGCTCCGTTACTGTAAGCTTATGGCTTTCAGTAATTGATTCTTCCCCTTTTCACCCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: GSVTVSLWLSVIDSSPFHPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...GTGAAAAGGGGAAGAATCAATTACTGAAAGCCATAAGCTTACAGTAACGGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTCAGGCAAGTCATTCTTACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: ISVMDLWLGHKHLRQVILTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...AAGAATGACTTGCCTGAGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCACTGAACTTCTTGGCTaGCACAACTTGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSTELLG*HNLPLP
Trigger: TGGCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACACATTACTGAACTTCTaGGCTTGCACAACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNTLLNF*ACTTCP
Trigger: AGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GTGCAGTCCAATTCGCATCTTGATAGGTTCTCCATGGGGAGACATAACTTCATCCAGATTGTAAGCAAATaGAGGTCTGCTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: VQSNSHLDRFSMGRHNFIQIVSK*RSAEMF
Trigger: AAACATTTCAGCAGACCTCAATTTGCTTACAATCTG...GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCGTGATCTTGAGATCCTaGAGCTTCGTGCAGAACATG +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSVILRS*SFVQNM
Trigger: CATGTTCTGCACGAAGCTCAAGGATCTCAAGATCAC...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACACCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCACCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CCAGAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTATCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PELHCSVLVDVRTPINILSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...TAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACTGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTTGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGCTCCATCATCTTAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: LDRFSMGRHNFIRELHHLKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...AAGATGATGGAGCTCTCTGATGAAGTTATGTCTCCCCATGGAGAACCTATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443668.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACAAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: ILLVSHLQSLKCFQRLYTNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...TGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: LQSLKCFQRLYTSSMSQTNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...GGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACCCCAAAGACTACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: LKCFQRLYTSSMSQTPKTTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...AGTCTTTGGGGTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGACATTACTGAACTTCTaGGCTTGCACAACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKTLLNF*ACTTCP
Trigger: AGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACACATTACTGAACTTCTaGGCTTGCACAACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNTLLNF*ACTTCP
Trigger: AGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGT...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TTTCAGATGGAACAAACATCTGAGCAGATACTTCAAGATTTGGGCATTATGCAAAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: FQMEQTSEQILQDLGIMQSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...TTGCATAATGCCCAAATCTTGAAGTATCTGCTCAGATGTTTGTTCCATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFSPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACACCAGGATATGAGATaGCAGGTGACTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLHQDMR*QVTPSV
Trigger: AACTGATGGAGTCACCTGCAATCTCATATCCTGGTG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAGGCTGAGTGGTTTATaGAGTCAAAGTCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSRLSGL*SQSQSC
Trigger: ACAGGACTGACTTTGACTCAATAAACCACTCAGCCT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGCTGATTACAGGCTGTTaGTCCACTATTTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMLITGC*STIFPS
Trigger: AGATGGAAAAATAGTGGACAAACAGCCTGTAATCAG...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGTCAATACAGATGGATTaGGCAGCATTTCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMSIQMD*AAFQME
Trigger: TTCCATCTGAAATGCTGCCAAATCCATCTGTATTGA...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp AAAAGAAGAATGATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCTGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: KRRMMEDYVISVMDLWLGWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...GCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATCATTCTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TACCCTTGGAATACTAGAGGCCAATCAGTAATGAATATCCCTGATGTCACCATGGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: YPWNTRGQSVMNIPDVTMDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...CATGGTGACATCAGGGATATTCATTACTGATTGGCCTCTAGTATTCCAAGGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATAGCCTTCTGATGCCATaGCCAAATTGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYSLLMP*PNCRIV
Trigger: GACAATTCTGCAATTTGGCAATGGCATCAGAAGGCT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GATGGAAGACTATGTAATATCTGTCATGGATTTATGGCTGGGCCACAAACACCTAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: DGRLCNICHGFMAGPQTPKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...AGGTGTTTGTGGCCCAGCCATAAATCCATGACAGATATTACATAGTCTTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTACCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAACTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: ELHCSVLVDVRTPINILRNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...TCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAAGTCCAATTCGCATCTaGATAGGTTCTCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIISPIRI*IGSPWG
Trigger: TCCCCATGGAGAACCTATCAAGATGCGAATTGGACT...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp ACCCTATCCTTAACCATGCTGTTTCTAATAGTCTTTGGAAAACACACATCTGATAGGCTGAGTGGTTTATaGAGTCAAAGTCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: TLSLTMLFLIVFGKHTSDRLSGL*SQSQSC
Trigger: ACAGGACTGACTTTGACTCAATAAACCACTCAGCCT...ATCAGATGTGTGTTTTCCAAAGACTATTAGAAACAGCATGGTTAAGGATAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp TCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCAAACGGTCTGCTGAAATGTTaGATCAAGACTACATTCCAT +
Preference number: 5 (lower is better)
Translates to: STIPKVLSEALHIFNESNGLLKC*IKTTFH
Trigger: ATGGAATGTAGTCTTGATCAAACATTTCAGCAGACC...GTTTGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACGTTAGGGAAGCAGTCTaGAGACCCAGTCTTATTTTT +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNVREAV*RPSLIF
Trigger: AAAAATAAGACTGGGTCTCAAGACTGCTTCCCTAAC...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCCAAGACCCCATCTCTTaGTGTGCTGATTTATTTTCC +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLQDPIS*CADLFS
Trigger: GGAAAATAAATCAGCACACAAAGAGATGGGGTCTTG...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTACACATCTTCAATGAGTCATCCACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: PSTIPKVLSEALHIFNESSTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTGGA...TGACTCATTGAAGATGTGTAGAGCCTCTGAAAGCACTTTAGGGATTGTAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509901.5
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCTCACCAAGAGATTCTTaGATAACCTCCACTGGAACT +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSSPRDS*ITSTGT
Trigger: AGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGA...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATGGAATGGAAATGTCTaGCAGAATAGCGATGTGGGA +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIWNGNV*QNSDVG
Trigger: TCCCACATCGCTATTCTGCAAGACATTTCCATTCCA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp CTGCACTGCAGTGTACTAGTTGATGTCAGAACACCTATCAACATACTAAGAGTAGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: LHCSVLVDVRTPINILRVDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...TACTCTTAGTATGTTGATAGGTGTTCTGACATCAACTAGTACACTGCAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511507.5
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCCGCTAAACGTCTGGTaGATTTTTGGAGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRPLNVW*IFGVRI
Trigger: AATTCTGACTCCAAAAATCAACCAGACGTTTAGCGG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCAACAATGTAGATCATTaGGCCTTTGAGGTCCATAAC +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSNNVDH*AFEVHN
Trigger: GTTATGGACCTCAAAGGCCAAATGATCTACATTGTT...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFCRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRPTGFS*RKTFLY
Trigger: ATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTATCTGGGAAAATCAGTTaGCAAATACTCTCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: EKDCDLAPEILILLVSHLSGKIS*QILSAK
Trigger: TTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGA...TAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS-3UTR CAA 90 bp ATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCTCGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: ILILLVSHLQSLKCFQRLDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...GAGCCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: DLAPEILILLVSHLQSLKKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...CTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp TGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: CDLAPEILILLVSHLQSLKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...TAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTACCCCAAAAACAAGATaGCACTGGATTCAACAATGT +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFTPKTR*HWIQQC
Trigger: ACATTGTTGAATCCAGTGCAATCTTGTTTTTGGGGT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATGCAGAGTTGAAAGTTaGAAAGAACTGAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIICRVES*KELRVS
Trigger: TGACACCCTCAGTTCTTTCAAACTTTCAACTCTGCA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCAGATTGTAAGCAAATaGAGGTCTGCTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: DCDLAPEILILLVSHLQSQIVSK*RSAEMF
Trigger: AAACATTTCAGCAGACCTCAATTTGCTTACAATCTG...GGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GGTTTATTGAGTCAAAGTCAGTCCTGTAAGATACGGGGTTATCACTTAGTAAACCAGATTGTAAGCAAATaGAGGTCTGCTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: GLLSQSQSCKIRGYHLVNQIVSK*RSAEMF
Trigger: AAACATTTCAGCAGACCTCAATTTGCTTACAATCTG...GTTTACTAAGTGATAACCCCGTATCTTACAGGACTGACTTTGACTCAATAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGTGCATCAACAAGGGCTaGATTGTGGATTTAAAGCAT +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRCINKG*IVDLKH
Trigger: ATGCTTTAAATCCACAATCAAGCCCTTGTTGATGCA...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp CAGGATATGAGATTGCAGGTGACTCCATCAGTTTGTACAATTGACTACAATTATTTGAGGAAGACTTTCTaGTATGTTCTTCTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: QDMRLQVTPSVCTIDYNYLRKTF*YVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAA...ATAATTGTAGTCAATTGTACAAACTGATGGAGTCACCTGCAATCTCATATCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
ENST00000511108.5
ENST00000621234.4
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp GCTCCTGAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTAAAATTAGGCTTTCCTaGAAAGTCTCTCCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: APEILILLVSHLQSLKCFKIRLS*KVSPVH
Trigger: ATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTT...AAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTCAGGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000513574.1
CDS-3UTR CAA 90 bp AAACAGGAGAAAGATTGTGACTTGGCTCCTGAAATTTTAATACTGCTTGTTAGCATAATACTTAACACATaGGGCTGTCCAACTTCTGTA +
Preference number: 5 (lower is better)
Translates to: KQEKDCDLAPEILILLVSIILNT*GCPTSV
Trigger: TACAGAAGTTGGACAGCCCAATGTGTTAAGTATTAT...GCTAACAAGCAGTATTAAAATTTCAGGAGCCAAGTCACAATCTTTCTCCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATATCAGTTTTGCTGCTCTaGTTCCAGGTGTATAATACT +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIISVLLL*FQVYNT
Trigger: AGTATTATACACCTGGAACAAGAGCAGCAAAACTGA...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp GAAATTTTAATACTGCTTGTTAGCCATCTACAATCCCTAAAGTGCTTTCAGAGGCCAAAAATCACAGACTaGTCAGTTATTGTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EILILLVSHLQSLKCFQRPKITD*SVIVFS
Trigger: TGAGAAGACAATAACTGACAAGTCTGTGATTTTTGG...CCTCTGAAAGCACTTTAGGGATTGTAGATGGCTAACAAGCAGTATTAAAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506455.6
CDS-3UTR CAA 90 bp ATTTGTGAGGATGTAACTATACTTTCTCAAGGCCTATGGCACTTTCCAATAATAGATGCCATTGCCAAATaGCAGAATTGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: ICEDVTILSQGLWHFPIIDAIAK*QNCHIF
Trigger: AAAGATATGACAATTCTGCAATTTGGCAATGGCATC...TATTATTGGAAAGTGCCATAGGCCTTGAGAAAGTATAGTTACATCCTCACAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000506455.6
CDS CCA 72 bp CCGGAGGCCGCAGCGCTGCACGCGGCTGATGGGCTCTaGGGCCCAGGCGCCCTGGCCGTGGGAGACCAGCGG +
Preference number: 6 (lower is better)
Translates to: PEAAALHAADGL*GPGALAVGDQR
Trigger: CCGCTGGTCTCCCACGGCCAGGGCGCCTGGGCCCCAGAGCCCATCAGCCGCGTGCAGCGCTGCGGCCTCCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513574.1
CDS CCA 72 bp CTCCAGGCGCTCCCTCCCCCACAGGTGTCCTCCGCCTaGGTCTGTTCCAGGCTGCTCGCTGCTCTAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LQALPPPQVSSA*VCSRLLAALAQ
Trigger: CTGCGCTAGAGCAGCGAGCAGCCTGGAACAGACCCAGGCGGAGGACACCTGTGGGGGAGGGAGCGCCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000621234.4
CDS CCA 72 bp CAGGCGACAGGGTGCAGACAGGCGCGGAGACCGCGGTaGCCCCCTGCTCACGCTTTCTCCAAGAGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: QATGCRQARRPR*PPAHAFSKSRS
Trigger: ACTGCGGCTCTTGGAGAAAGCGTGAGCAGGGGGCCACCGCGGTCTCCGCGCCTGTCTGCACCCTGTCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS GCA 72 bp AGGGTGCAGACAGGCGCGGAGACCGCGGTGGCCCCCTaGTCACGCTTTCTCCAAGAGCCGCAGTCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RVQTGAETAVAP*SRFLQEPQSWW
Trigger: CCACCAAGACTGCGGCTCTTGGAGAAAGCGTGAGCAGGGGGCCACCGCGGTCTCCGCGCCTGTCTGCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS GCA 72 bp TGTCATTGTCACTGTCAGGCAGCTCAGGCGACAGGGTaGAGACAGGCGCGGAGACCGCGGTGGCCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: CHCHCQAAQATG*RQARRPRWPPA
Trigger: AGCAGGGGGCCACCGCGGTCTCCGCGCCTGTCTGCACCCTGTCGCCTGAGCTGCCTGACAGTGACAATGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511108.5
ENST00000621234.4
CDS GCA 72 bp ATCCGCACTGTTCAACAGGCTAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCCCGCGTGGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: IRTVQQARRDAA*LGNCIARVAPR
Trigger: TCTGGGAGCCACGCGGGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCTAGCCTGTTGAACAGTGCGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455639.6
CDS GCA 72 bp TGTCTACCTGTTCAACAGGCTAGGCGGGACGCGGCGTaGCTCGGAAACTGTATCGCCCGCGTGGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: CLPVQQARRDAA*LGNCIARVAPR
Trigger: TCTGGGAGCCACGCGGGCGATACAGTTTCCGAGGCACGCCGCGTCCCGCCTAGCCTGTTGAACAGGTAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393832.7
ENST00000443668.6
ENST00000509901.5
CDS TCA 72 bp CTTCCTGCTGCCTCCTCTGAAGACTCGTTAGGAACTTaGCCTGGTGCCAGTAAGGAGAAAGGACACTCTCCT +
Preference number: 6 (lower is better)
Translates to: LPAASSEDSLGT*PGASKEKGHSP
Trigger: AGGAGAGTGTCCTTTCTCCTTACTGGCACCAGGTCAAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS GCA 72 bp GCTTCGTGCAGAACATGGTGTTGGTGTCTCTTACCCTaGTGCGATCTCCTCCTGATGAGCTGTAGTTCTTAT +
Preference number: 6 (lower is better)
Translates to: ASCRTWCWCLLP*CDLLLMSCSSY
Trigger: ATAAGAACTACAGCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCAACACCATGTTCTGCACGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS GCA 72 bp TCGTGCAGAACATGGTGTTGGTGTCTCTTACCCTGCTaGGATCTCCTCCTGATGAGCTGTAGTTCTTATATG +
Preference number: 6 (lower is better)
Translates to: SCRTWCWCLLPC*DLLLMSCSSYM
Trigger: CATATAAGAACTACAGCTCATCAGGAGGAGATCGCAGCAGGGTAAGAGACACCAACACCATGTTCTGCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296518.11
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000621234.4
CDS CCA 72 bp TTTCTTGTATGTTCTTCTCAGGAATGTCTTGACAGATaGGCACGGTTGCTTTGCAGCTCTCTGAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: FLVCSSQECLDR*ARLLCSSLSFL
Trigger: CAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTGTCAAGACATTCCTGAGAAGAACATACAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000509901.5
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS GCA 72 bp TTCAAACTCTGGGAAAATCAGTTTGCAAATACTCTCTaGCAAAGTGTGAAGATAGACTCGGCTCCGACTGGT +
Preference number: 6 (lower is better)
Translates to: FKLWENQFANTL*QSVKIDSAPTG
Trigger: ACCAGTCGGAGCCGAGTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGAGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS CAA 90 bp CTCTGCCAAAGTGTGAAGATAGACTCGGCTCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTATGTTCTTCTCAGGAATGTCTTGACA +
Preference number: 6 (lower is better)
Translates to: LCQSVKIDSAPTGFS*RKTFLYVLLRNVLT
Trigger: TGTCAAGACATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCTATCTTCACACTTTGGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS CCA 72 bp TCTCTGCCAAAGTGTGAAGATAGACTCGGCTCCGACTaGTTTTTCTTTGAGGAAGACTTTCTTGTATGTTCT +
Preference number: 6 (lower is better)
Translates to: SLPKCEDRLGSD*FFFEEDFLVCS
Trigger: AGAACATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCTATCTTCACACTTTGGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS GCA 72 bp CAACATTCAGCCGTTCAAACTCTGGGAAAATCAGTTTaGAAATACTCTCTGCCAAAGTGTGAAGATAGACTC +
Preference number: 6 (lower is better)
Translates to: QHSAVQTLGKSV*KYSLPKCEDRL
Trigger: GAGTCTATCTTCACACTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTGAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4
CDS CAA 72 bp AGTGTGAAGATAGACTCGGCTCCGACTGGTTTTTCTTaGAGGAAGACTTTCTTGTATGTTCTTCTCAGGAAT +
Preference number: 6 (lower is better)
Translates to: SVKIDSAPTGFS*RKTFLYVLLRN
Trigger: ATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCTATCTTCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000296518.11
ENST00000393832.7
ENST00000443668.6
ENST00000455639.6
ENST00000506455.6
ENST00000511108.5
ENST00000511507.5
ENST00000512983.5
ENST00000513574.1
ENST00000515201.5
ENST00000515602.5
ENST00000621234.4