Pregenerated sensors for GUCA2B (Homo sapiens)
Ensembl gene IDs: ENSG00000044012Ensembl transcript IDs: ENST00000372581.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTaGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTCAGGGTACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GPILSMDGDGSLPGW*AEGRGVPGGLRVPR Trigger: CCTGGGTACCCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CCA 90 bp | CAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTaGTGGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTCAGGGTACCC | + |
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Preference number: 1 (lower is better) Translates to: QGPILSMDGDGSLPG*WAEGRGVPGGLRVP Trigger: GGGTACCCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR TCA 90 bp | CATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTGGGCTaGAGGGCGAGGTGTCCCTGGTGGGCTCAGGGTACCCAGGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: HLEHGRGWKPARVVG*RARCPWWAQGTQGY Trigger: ATAGCCCTGGGTACCCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR-3UTR CCA 90 bp | GACCATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGCGAGGTGTCCCTGGTaGGCTCAGGGTACCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DHGGQGPILSMDGDGSLPARCPW*AQGTQG Trigger: GCCCTGGGTACCCTGAGCCCACCAGGGACACCTCGC...TGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CAA 90 bp | GAGCTGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATaGCTTTGTACCAGATCCAGCTGCTCAGGCCCTGGAAGGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: ELGCLRGLPLQLYVR*LCTRSSCSGPGRVV Trigger: CACCACCCTTCCAGGGCCTGAGCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CAA 90 bp | GGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTaGTACCAGATCCAGCTGCTCAGGCCCTGGAAGGGTGGTGATGAC | + |
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Preference number: 2 (lower is better) Translates to: GLPQGPPPPTLCPIA*YQIQLLRPWKGGDD Trigger: GTCATCACCACCCTTCCAGGGCCTGAGCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CCA 72 bp | TTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTaGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LSMDGDGSLPGW*AEGRGVPGGLR Trigger: CCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CCA 72 bp | ATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTaGTGGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ILSMDGDGSLPG*WAEGRGVPGGL Trigger: GAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGATCCAGCTGCGGCCAGGGACCCATCTaGAGCATGGACGGGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: RGLPLQLYVRLLCTRSSCGQGPI*SMDGDG Trigger: TCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCC...GCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR GCA 72 bp | GCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTaGTTTGTACCAGATCCAGCTGCTCAGGCCCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ASGASPSNSMSD*FVPDPAAQALE Trigger: TTCCAGGGCCTGAGCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTCAGGGTACCCAGGGCTGAGCATGGACGGGGATaGAAGCCTGCCAGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GWWAEGRGVPGGLRVPRAEHGRG*KPARVV Trigger: CACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTC...AGCCCTGGGTACCCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTGGGGAAGCCTGCCAGGGTaGTGGGCTGAAGGGCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GQGPILSMDGDGSLPGWWGSLPG*WAEGRG Trigger: ACCTCGCCCTTCAGCCCACCACCCTGGCAGGCTTCC...CCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | GACCATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCATCCCTGGGTTCCCCCTaGCGCTGTCCACCGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DHGGQGPILSMDGDGSLPSLGSP*RCPPSP Trigger: GGGAGACGGTGGACAGCGGCAGGGGGAACCCAGGGA...TGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | GACCATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGCCCTGATGCAGCCCTaGAGCCCATCGCGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: DHGGQGPILSMDGDGSLPALMQP*SPSRSL Trigger: CAGGGAGCGCGATGGGCTGCAGGGCTGCATCAGGGC...TGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGAGCCTGCCAGGGTGGTaGGCTGAAGGGCGAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: WWPGTHLEHGRGWKPARVSLPGW*AEGRGV Trigger: GACACCTCGCCCTTCAGCCCACCACCCTGGCAGGCT...CACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGCCCATCGCGCTCCCTaGGTTCCCCCTGCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: WAASGASPSNSMSDCFVPAHRAP*VPPAAV Trigger: GACAGCGGCAGGGGGAACCCAGGGAGCGCGATGGGC...TGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | GGTGATGACCATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCATTCAGGAGCTGGGCTaGCTCAGGGGCCTCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GDDHGGQGPILSMDGDGSIQELG*LRGLPL Trigger: GAGGGGGAGGCCCCTGAGGCAGCCCAGCTCCTGAAT...GCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTCATCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | AGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGATCCAGCTGCCCTGCAGGCGGGGGCTaGGTGCCCACTGTGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGLPLQLYVRLLCTRSSCPAGGG*VPTVPP Trigger: TGGAGGCACAGTGGGCACCCAGCCCCCGCCTGCAGG...GCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGCGAGGTGTCCCTGGTaGGCTCAGGGTACCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WAASGASPSNSMSDCFVPARCPW*AQGTQG Trigger: GCCCTGGGTACCCTGAGCCCACCAGGGACACCTCGC...TGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTGGCAGCTGCTCAGGCCCTaGAAGGGTGGTGATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: GQGPILSMDGDGSLPGWWQLLRP*KGGDDH Trigger: ATGGTCATCACCACCCTTCCAGGGCCTGAGCAGCTG...CCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAAGGGCGAGGTGTCCCTaGTGGGCTCAGGGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: WAASGASPSNSMSDCFVPRARCP*WAQGTQ Trigger: CTGGGTACCCTGAGCCCACCAGGGACACCTCGCCCT...TGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CAA 72 bp | AAGGGTGGTGATGACCATGGTGGCCAGGGACCCATCTaGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KGGDDHGGQGPI*SMDGDGSLPGW Trigger: CCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTCATCACCACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTGGTGTAGACTGACTGTGTaGTCTGCAGCAGCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQGPILSMDGDGSLPGWWCRLTV*SAAAAG Trigger: TCCTGCTGCTGCTGCAGAGCACACAGTCAGTCTACA...CCACCACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR TCA 90 bp | TGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGTACTGGATGTAGACTaGCTGTGTGCTCTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WWPGTHLEHGRGWKPARVVLDVD*LCALQQ Trigger: CTGCTGCAGAGCACACAGTCAGTCTACATCCAGTAC...CACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | GGTGATGACCATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCTGTACCAGATCCAGCTaGTCAGGCCCTGGAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GDDHGGQGPILSMDGDGSCTRSS*SGPGRV Trigger: CACCCTTCCAGGGCCTGAGCAGCTGGATCTGGTACA...GCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATGGTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGCACTCAGCTTCTTCATaGATTCCAGCTGGACCCGGA | + |
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Preference number: 4 (lower is better) Translates to: WWPGTHLEHGRGWKPARVHSASS*IPAGPG Trigger: TCCGGGTCCAGCTGGAATCCATGAAGAAGCTGAGTG...CACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CAA 72 bp | CAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTaGTACCAGATCCAGCTGCTCAGGCCCTGGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QGPPPPTLCPIA*YQIQLLRPWKG Trigger: ACCCTTCCAGGGCCTGAGCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| 3UTR CAA 72 bp | TGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATaGCTTTGTACCAGATCCAGCTGCTCAGGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CLRGLPLQLYVR*LCTRSSCSGPG Trigger: TCCAGGGCCTGAGCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | TGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAACTGACTGTGTGCTCTaGAGCAGCAGCAGGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: WAASGASPSNSMSDCFVPTDCVL*SSSRRT Trigger: GGTCCTCCTGCTGCTGCTGCAGAGCACACAGTCAGT...TGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | AGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGATCCAGCTGCGCTGGGTGCCCACTGTaGCTCCAGGTCACTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RGLPLQLYVRLLCTRSSCAGCPL*LQVTQL Trigger: AAGCTGAGTGACCTGGAGGCACAGTGGGCACCCAGC...GCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CCA 90 bp | TGGGCTGCCTCAGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCATTCATGGATTCCAGCTaGACCCGGAAGCCTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: WAASGASPSNSMSDCFVPFMDSS*TRKPWY Trigger: GTACCAAGGCTTCCGGGTCCAGCTGGAATCCATGAA...TGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCTGAGGCAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR GCA 90 bp | CATGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGAACTCTATGTCCGATTaGTTTGTACCAGATCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HGGQGPILSMDGDGSLPGNSMSD*FVPDPA Trigger: AGCTGGATCTGGTACAAAGCAATCGGACATAGAGTT...CCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS GCA 90 bp | GCAGGAGGACCACGGCCACTCCTGGCAGGAGCCCTGATGCAGCCCTaGAGCCCATCGCGCTCCCTGGGTTCCCCCTGCCGCTGTCCACCG | + |
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Preference number: 5 (lower is better) Translates to: AGGPRPLLAGALMQP*SPSRSLGSPCRCPP Trigger: CGGTGGACAGCGGCAGGGGGAACCCAGGGAGCGCGATGGGCTGCAGGGCTGCATCAGGGCTCCTGCCAGGAGTGGCCGTGGTCCTCCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CAA 90 bp | TGGTGGCCAGGGACCCATCTTGAGCATGGACGGGGATGGAAGCCTGCCAGGGTGGGCCAGGGACCCATCTaGAGCATGGACGGGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: WWPGTHLEHGRGWKPARVGQGPI*SMDGDG Trigger: TCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCC...CACCCTGGCAGGCTTCCATCCCCGTCCATGCTCAAGATGGGTCCCTGGCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGTGGGCTGAAGGGCGAGGTGTCCCTGGTGGGCTCAGGGTACCCAGGGCTCAACTCTATGTCCGATaGCTTTGTACCAGATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GWWAEGRGVPGGLRVPRAQLYVR*LCTRSS Trigger: GCTGGATCTGGTACAAAGCAATCGGACATAGAGTTG...AGCCCTGGGTACCCTGAGCCCACCAGGGACACCTCGCCCTTCAGCCCACCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS CCA 90 bp | GGGGGCTGGGTGCCCACTGTGCCTCCAGGTCACTCAGCTTCTTCATaGATTCCAGCTGGACCCGGAAGCCTTGGTACTGGATGTAGACTG | + |
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Preference number: 5 (lower is better) Translates to: GGWVPTVPPGHSASS*IPAGPGSLGTGCRL Trigger: CAGTCTACATCCAGTACCAAGGCTTCCGGGTCCAGCTGGAATCCATGAAGAAGCTGAGTGACCTGGAGGCACAGTGGGCACCCAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCCTCCCCCTCCAACTCTATGTCCGATTGCTTTGTACCAGATCCAGCTGCCTATGTCCGATTGCTTaGTACCAGATCCAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGLPLQLYVRLLCTRSSCLCPIA*YQIQLL Trigger: GAGCAGCTGGATCTGGTACAAAGCAATCGGACATAG...GCAGCTGGATCTGGTACAAAGCAATCGGACATAGAGTTGGAGGGGGAGGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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| CDS GCA 72 bp | CCACGGCCACTCCTGGCAGGAGCCCTGATGCAGCCCTaGAGCCCATCGCGCTCCCTGGGTTCCCCCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRPLLAGALMQP*SPSRSLGSPCR Trigger: GCGGCAGGGGGAACCCAGGGAGCGCGATGGGCTGCAGGGCTGCATCAGGGCTCCTGCCAGGAGTGGCCGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372581.2 |
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