Pregenerated sensors for GUCA2A (Homo sapiens)
Ensembl gene IDs: ENSG00000197273Ensembl transcript IDs: ENST00000357001.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTaGTCCTCCCGACTGGACCAGGGTAGGTTGAGCTGCTGGGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TVLGRGLQSPSSSPG*SSRLDQGRLSCWEW Trigger: CCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR TCA 90 bp | CCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTTaGGCTGCTGGGAGTGGAGTATCATGGGTGGCCCTTTCTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PVPPRAAPPDWTRVG*AAGSGVSWVALSAG Trigger: TCCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR GCA 90 bp | TCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTTGAGCTaGTGGGAGTGGAGTATCATGGGTGGCCCTTTCTGCAGGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SSPGCSSRLDQGRLS*WEWSIMGGPFCRRK Trigger: TTTTCTCCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR CCA 90 bp | TCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTTGAGCTGCTaGGAGTGGAGTATCATGGGTGGCCCTTTCTGCAGGAGAAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SPGCSSRLDQGRLSC*EWSIMGGPFCRRKE Trigger: CTCTTTTCTCCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR CCA 90 bp | GGCTGCTCCTCCCGACTGGACCAGGGTAGGTTGAGCTGCTGGGAGTaGAGTATCATGGGTGGCCCTTTCTGCAGGAGAAAAGAGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GCSSRLDQGRLSCWE*SIMGGPFCRRKELP Trigger: GGGAAGCTCTTTTCTCCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGATTGAGCTGCTGGGAGTaGAGTATCATGGGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GARPPVTQFLPGLLLPTGLSCWE*SIMGGP Trigger: AGGGCCACCCATGATACTCCACTCCCAGCAGCTCAA...TCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR CAA 90 bp | CCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTaGAGCTGCTGGGAGTGGAGTATCATGGGTGGCCCTTTCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSSSPGCSSRLDQGR*SCWEWSIMGGPFCR Trigger: CCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR-3UTR CCA 90 bp | GCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGAGTGGAGTATCATaGGTGGCCCTTTCTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ARPPVTQFLPGLLLPTGPGSGVS*VALSAG Trigger: TCCTGCAGAAAGGGCCACCCATGATACTCCACTCCC...TGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGAGGTAGGTTGAGCTGCTaGGAGTGGAGTATCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: GARPPVTQFLPGLLLPTGGRLSC*EWSIMG Trigger: ACCCATGATACTCCACTCCCAGCAGCTCAACCTACC...TCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACATGGGTGGCCCTTTCTaGAGGAGAAAAGAGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: CWGEASSHPVPPRAAPPDMGGPF*RRKELP Trigger: GGGAAGCTCTTTTCTCCTGCAGAAAGGGCCACCCAT...GTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR GCA 72 bp | GGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTaGTCCTCCCGACTGGACCAGGGTAGGTTGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GRGLQSPSSSPG*SSRLDQGRLSC Trigger: GCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR TCA 72 bp | CCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTTaGGCTGCTGGGAGTGGAGTATCATGGGTGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PRAAPPDWTRVG*AAGSGVSWVAL Trigger: AAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR GCA 72 bp | GGCTGCTCCTCCCGACTGGACCAGGGTAGGTTGAGCTaGTGGGAGTGGAGTATCATGGGTGGCCCTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GCSSRLDQGRLS*WEWSIMGGPFC Trigger: GCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR CCA 72 bp | TCCCGACTGGACCAGGGTAGGTTGAGCTGCTGGGAGTaGAGTATCATGGGTGGCCCTTTCTGCAGGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SRLDQGRLSCWE*SIMGGPFCRRK Trigger: TTTTCTCCTGCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | GGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTTTCCATCCTGCACGGTaGCCCCTCCTGCCAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLQSPSSSPGCSSRLDQGFHPAR*PLLPRR Trigger: CCGCCTTGGCAGGAGGGGTCACCGTGCAGGATGGAA...ACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | CGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGAGTTCCTCCCCGGGCTaGTCCTCCCGACTGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RGLQSPSSSPGCSSRLDQSSSPG*SSRLDQ Trigger: CTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACT...CTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | TGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGCATTCATGGCAGCAGTaGCCGAGAGAGGGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WGEASSHPVPPRAAPPDWHSWQQ*PREGWL Trigger: CAGCCACCCCTCTCTCGGGCACTGCTGCCATGAATG...CCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | TGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGTGGACCAGGGTAGGTTaGGCTGCTGGGAGTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: WGEASSHPVPPRAAPPDWWTRVG*AAGSGV Trigger: TACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCA...CCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | TGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGTGGGTGCAAAGTTCCTaGGTTTCCCAACCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: WGEASSHPVPPRAAPPDWWVQSS*VSQPWA Trigger: AGCCCAGGGTTGGGAAACTCAGGAACTTTGCACCCA...CCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | TGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGTTGAGCTGCTGGGAGTaGAGTATCATGGGTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WGEASSHPVPPRAAPPDWLSCWE*SIMGGP Trigger: AGGGCCACCCATGATACTCCACTCCCAGCAGCTCAA...CCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| 3UTR CAA 72 bp | TCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTaGAGCTGCTGGGAGTGGAGTATCATGGGTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SPGCSSRLDQGR*SCWEWSIMGGP Trigger: AGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | GGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGAGCTCCTGGAGGTCTTTaGGCTTCTTCACTGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: GARPPVTQFLPGLLLPTGAPGGL*ASSLTP Trigger: TGGAGTCAGTGAAGAAGCTCAAAGACCTCCAGGAGC...TCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | GGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGAATGGGTGGCCCTTTCTaGAGGAGAAAAGAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GARPPVTQFLPGLLLPTGMGGPF*RRKELP Trigger: GGGAAGCTCTTTTCTCCTGCAGAAAGGGCCACCCAT...TCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | GCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGTATCTCCTGGGCATTaGGCTCCTTGCAGAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ARPPVTQFLPGLLLPTGPVSPGH*APCREA Trigger: AGCCTCTCTGCAAGGAGCCCAATGCCCAGGAGATAC...TGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | GCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCATTATTAGCTGGGGGTTaGAGTGGCAGGGAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: ARPPVTQFLPGLLLPTGPLLAGG*SGREGQ Trigger: CTGTCCTTCCCTGCCACTTCAACCCCCAGCTAATAA...TGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGCAGGGAAGGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCAACCCTGGGCTCCTaGGGCTCCTGGAGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KWQGRTVLGRGLQSPSSSPTLGS*GSWRSL Trigger: CAAAGACCTCCAGGAGCCCCAGGAGCCCAGGGTTGG...GGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCCTTCCCTGCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | GGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACGTGGAGTATCATGGGTaGCCCTTTCTGCAGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GRGLQSPSSSPGCSSRLDVEYHG*PFLQEK Trigger: TTTCTCCTGCAGAAAGGGCCACCCATGATACTCCAC...GTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | GGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTGGGAGTGGAGTATCATaGGTGGCCCTTTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQCWGEASSHPVPPRAAPGSGVS*VALSAG Trigger: TCCTGCAGAAAGGGCCACCCATGATACTCCACTCCC...AGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR TCA 90 bp | GCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAATTTCCTCCAGCCTCTaGAGTATCTCCTGGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: ARPPVTQFLPGLLLPTGPISSSL*SISWAL Trigger: CAATGCCCAGGAGATACTTCAGAGGCTGGAGGAAAT...TGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | GGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTGGTTGCTACAGAGGATaGGAACCACAGGTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: GQCWGEASSHPVPPRAAPGCYRG*EPQVHQ Trigger: CTGGTGAACCTGTGGTTCCCATCCTCTGTAGCAACC...AGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | CCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGGGTAGGTTGAGCTGCGGTAGGTTGAGCTGCTaGGAGTGGAGTATCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: PSSSPGCSSRLDQGRLSCGRLSC*EWSIMG Trigger: ACCCATGATACTCCACTCCCAGCAGCTCAACCTACC...GCAGCTCAACCTACCCTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | GGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACATCTGGTTTATTAGCTaGGGGTTGAAGTGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GRGLQSPSSSPGCSSRLDIWFIS*GLKWQG Trigger: TCCCTGCCACTTCAACCCCCAGCTAATAAACCAGAT...GTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | ATCATGGGTGGCCCTTTCTGCAGGAGAAAAGAGCTTCCCTGCTGCGGAGGGGAGGGCTCCTGGGGCTCCTaGAGGTCTTTGAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IMGGPFCRRKELPCCGGEGSWGS*RSLSFF Trigger: GAAGAAGCTCAAAGACCTCCAGGAGCCCCAGGAGCC...CTCCCCTCCGCAGCAGGGAAGCTCTTTTCTCCTGCAGAAAGGGCCACCCATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGCAGGGAAGGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCTTCACCAGGGATGGGTaGAAAGTTCCTGAGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KWQGRTVLGRGLQSPSSSFTRDG*KVPEFP Trigger: GGGAAACTCAGGAACTTTGCACCCATCCCTGGTGAA...GGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCCTTCCCTGCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | TCCCGACTGGACCAGGGTAGGTTGAGCTGCTGGGAGTGGAGTATCATGGGTGGCCTGGAAAGTTCGGGTTaGTACAGAGGATGGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: SRLDQGRLSCWEWSIMGGLESSG*YRGWEP Trigger: TGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAG...GCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAGTCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | CTGGACCAGGGTAGGTTGAGCTGCTGGGAGTGGAGTATCATGGGTGGCCCTTTCCAGGGTAGGTTGAGCTaGTGGGAGTGGAGTATCATG | + |
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Preference number: 4 (lower is better) Translates to: LDQGRLSCWEWSIMGGPFQGRLS*WEWSIM Trigger: CATGATACTCCACTCCCAGCAGCTCAACCTACCCTG...GAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR GCA 90 bp | GACCAGGGTAGGTTGAGCTGCTGGGAGTGGAGTATCATGGGTGGCCCTTTCTGCCACAGATTTCACATGTaGCCGGGTCCTCAGCGATTT | + |
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Preference number: 4 (lower is better) Translates to: DQGRLSCWEWSIMGGPFCHRFHM*PGPQRF Trigger: AAATCGCTGAGGACCCGGGCACATGTGAAATCTGTG...GCAGAAAGGGCCACCCATGATACTCCACTCCCAGCAGCTCAACCTACCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGCAGGGAAGGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCAGGCTTGAGTTCTTCTaGAAAGTTCGGGTTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: KWQGRTVLGRGLQSPSSSRLEFF*KVRVAT Trigger: TGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCT...GGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCCTTCCCTGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CAA 90 bp | CGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGCTCCTCCCGACTGGACCAGTCTGGAAAGTTCGGGTaGCTACAGAGGATGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: RGLQSPSSSPGCSSRLDQSGKFG*LQRMGT Trigger: GGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGA...CTGGTCCAGTCGGGAGGAGCAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGGACAGTGTTGGGGCGAGGCCTCCAGTCACCCAGTTCCTCCCCGGGCTGTGGGCATTGGGCTCCTaGCAGAGAGGCTTGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GKDSVGARPPVTQFLPGLWALGS*QRGLSS Trigger: AGAACTCAAGCCTCTCTGCAAGGAGCCCAATGCCCA...CAGCCCGGGGAGGAACTGGGTGACTGGAGGCCTCGCCCCAACACTGTCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS GCA 90 bp | CGGGTTGCTACAGAGGATGGGAACCACAGGTTCACCAGGGATGGGTaGAAAGTTCCTGAGTTTCCCAACCCTGGGCTCCTGGGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: RVATEDGNHRFTRDG*KVPEFPNPGLLGLL Trigger: CAGGAGCCCCAGGAGCCCAGGGTTGGGAAACTCAGGAACTTTGCACCCATCCCTGGTGAACCTGTGGTTCCCATCCTCTGTAGCAACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS-3UTR CAA 90 bp | TCATGGGTGGCCCTTTCTGCAGGAGAAAAGAGCTTCCCTGCTGCGGAGGGGAGGGGCTCCTGGAGGTCTTaGAGCTTCTTCACTGACTCC | + |
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Preference number: 5 (lower is better) Translates to: SWVALSAGEKSFPAAEGRGSWRS*SFFTDS Trigger: GGAGTCAGTGAAGAAGCTCAAAGACCTCCAGGAGCC...CCTCCCCTCCGCAGCAGGGAAGCTCTTTTCTCCTGCAGAAAGGGCCACCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS GCA 90 bp | CCCCCTAGCATCCGGTACAGGCAGCGTAGGCACAGATTTCACATGTaGCCGGGTCCTCAGCGATTTCCTCCAGCCTCTGAAGTATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PPSIRYRQRRHRFHM*PGPQRFPPASEVSP Trigger: AGGAGATACTTCAGAGGCTGGAGGAAATCGCTGAGGACCCGGGCACATGTGAAATCTGTGCCTACGCTGCCTGTACCGGATGCTAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS CCA 90 bp | CCAGGGATGGGTGCAAAGTTCCTGAGTTTCCCAACCCTGGGCTCCTaGGGCTCCTGGAGGTCTTTGAGCTTCTTCACTGACTCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PGMGAKFLSFPTLGS*GSWRSLSFFTDSRE Trigger: TTCTCTGGAGTCAGTGAAGAAGCTCAAAGACCTCCAGGAGCCCCAGGAGCCCAGGGTTGGGAAACTCAGGAACTTTGCACCCATCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS TCA 90 bp | GCCTCTGAAGTATCTCCTGGGCATTGGGCTCCTTGCAGAGAGGCTTaGGTTCTTCTGGAAAGTTCGGGTTGCTACAGAGGATGGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: ASEVSPGHWAPCREA*VLLESSGCYRGWEP Trigger: TGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCTCTCTGCAAGGAGCCCAATGCCCAGGAGATACTTCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS CCA 90 bp | TATCTCCTGGGCATTGGGCTCCTTGCAGAGAGGCTTGAGTTCTTCTaGAAAGTTCGGGTTGCTACAGAGGATGGGAACCACAGGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: YLLGIGLLAERLEFF*KVRVATEDGNHRFT Trigger: GGTGAACCTGTGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCTCTCTGCAAGGAGCCCAATGCCCAGGAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS TCA 72 bp | GAACCACAGGTTCACCAGGGATGGGTGCAAAGTTCCTaGGTTTCCCAACCCTGGGCTCCTGGGGCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EPQVHQGWVQSS*VSQPWAPGAPG Trigger: TCCAGGAGCCCCAGGAGCCCAGGGTTGGGAAACTCAGGAACTTTGCACCCATCCCTGGTGAACCTGTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS GCA 72 bp | ATCCGGTACAGGCAGCGTAGGCACAGATTTCACATGTaGCCGGGTCCTCAGCGATTTCCTCCAGCCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: IRYRQRRHRFHM*PGPQRFPPASE Trigger: TTCAGAGGCTGGAGGAAATCGCTGAGGACCCGGGCACATGTGAAATCTGTGCCTACGCTGCCTGTACCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS CAA 90 bp | TTGGGCTCCTTGCAGAGAGGCTTGAGTTCTTCTGGAAAGTTCGGGTaGCTACAGAGGATGGGAACCACAGGTTCACCAGGGATGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LGSLQRGLSSSGKFG*LQRMGTTGSPGMGA Trigger: TGCACCCATCCCTGGTGAACCTGTGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCTCTCTGCAAGGAGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS CCA 72 bp | GGCATTGGGCTCCTTGCAGAGAGGCTTGAGTTCTTCTaGAAAGTTCGGGTTGCTACAGAGGATGGGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: GIGLLAERLEFF*KVRVATEDGNH Trigger: GTGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCTCTCTGCAAGGAGCCCAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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| CDS CAA 72 bp | TTGCAGAGAGGCTTGAGTTCTTCTGGAAAGTTCGGGTaGCTACAGAGGATGGGAACCACAGGTTCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LQRGLSSSGKFG*LQRMGTTGSPG Trigger: CCCTGGTGAACCTGTGGTTCCCATCCTCTGTAGCAACCCGAACTTTCCAGAAGAACTCAAGCCTCTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357001.3 |
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