Pregenerated sensors for GUCA1A (Homo sapiens)
Ensembl gene IDs: ENSG00000048545Ensembl transcript IDs: ENST00000372958.2, ENST00000654459.1, ENST00000679182.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCTCTTTCACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATaGATGCACATGCATTCAGATTCAGATCTACACTGTCATCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: TLFHFLADTKASQSE*MHMHSDSDLHCHLN Trigger: ATTTAGATGACAGTGTAGATCTGAATCTGAATGCATGTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR CAA 90 bp | CAGGGTCCCCCAGGGCAGAATGGATGTGTGATTGCAGCACTGGGATaGAAGCTGCAGCCACTGGATCTGCAGGATTCCATAAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QGPPGQNGCVIAALG*KLQPLDLQDSIRGL Trigger: CAGGCCTCTTATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAATCCCAGTGCTGCAATCACACATCCATTCTGCCCTGGGGGACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCTTTCACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATGCATGCACTGCCTCCCTGGTTCATaGAATTCTTCTGCCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLFHFLADTKASQSECMHCLPGS*NSSASA Trigger: GGCTGAGGCAGAAGAATTGCATGAACCAGGGAGGCA...GTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGGGAGCCATGGAACACCACATGTCACCAAGGAGGGGAAGTATAAGGGAGCTTCCCAGAGTGAATaGATGCACATGCATTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SVGSHGTPHVTKEGKYKGASQSE*MHMHSD Trigger: ATCTGAATGCATGTGCATGCATTCACTCTGGGAAGC...TCCCTTATACTTCCCCTCCTTGGTGACATGTGGTGTTCCATGGCTCCCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCTTTCACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATGCATGCACTCCAACCACCCCACATaGATCACCTTCTTCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: TLFHFLADTKASQSECMHSNHPT*ITFFST Trigger: TGTAGAGAAGAAGGTGATGCATGTGGGGTGGTTGGA...GTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTTCACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATGCATGCACATTTACCACCACACCTaGCAAAACATCCCATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: TLFHFLADTKASQSECMHIYHHT*QNIPSL Trigger: TAAGGATGGGATGTTTTGCCAGGTGTGGTGGTAAAT...GTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR GCA 72 bp | CACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATaGATGCACATGCATTCAGATTCAGATCTACACTGT | + |
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Preference number: 3 (lower is better) Translates to: HFLADTKASQSE*MHMHSDSDLHC Trigger: ACAGTGTAGATCTGAATCTGAATGCATGTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| 3UTR TCA 72 bp | AGGAGGGGAAGTATAAGGGACTTGCGCAGGCTCTTCTaGAAAAGTATGGATTTCTTCTTGAGAAATGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: RRGSIRDLRRLF*KSMDFFLRNED Trigger: ATCCTCATTTCTCAAGAAGAAATCCATACTTTTTCAGAAGAGCCTGCGCAAGTCCCTTATACTTCCCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GCTGGGAGAGGAGTCAGAAGGGCTAGGGGGTCACCCGACGGCAGAGGGATGTTGCATCACGTTGCCCATTaGTCAGGCCTTCAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGRGVRRARGSPDGRGMLHHVAH*SGLQGA Trigger: AGCCCCCTGAAGGCCTGAGCAATGGGCAACGTGATG...CAACATCCCTCTGCCGTCGGGTGACCCCCTAGCCCTTCTGACTCCTCTCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCGTGCACTCAGCCGGCTaGCTCAGCGGCCTCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPVHSAG*LSGLVS Trigger: GCTGACGAGGCCGCTGAGGCAGCCGGCTGAGTGCAC...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGGAAGCAGCCGGGCGGTaGACTCAGCCGGCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QFCLRESTSRRAWTGEAQEAAGR*TQPAAS Trigger: TGAGGCAGCCGGCTGAGTGCACCGCCCGGCTGCTTC...CTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GCTGGGAGAGGAGTCAGAAGGGCTAGGGGGTCACCCGACGGCAGAGGGATGTTGAGGGATGTTGAACAGTaGCCCCCAGCAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: AGRGVRRARGSPDGRGMLRDVEQ*PPARSA Trigger: AGCACTCCTTGCTGGGGGGCACTGTTCAACATCCCT...CAACATCCCTCTGCCGTCGGGTGACCCCCTAGCCCTTCTGACTCCTCTCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AAGAACACCACCAACAGGCACCACCATACCACCCCACCCGCTAGTGCAGAAGCAGCCCCCTCCTCGTCTTaGTCGCCATTCTGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KNTTNRHHHTTPPASAEAAPSSS*SPFWSL Trigger: CAGGCTCCAGAATGGCGAGCAAGACGAGGAGGGGGC...TGCTTCTGCACTAGCGGGTGGGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GCAGGATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGGTGCACTCAGCCGGCTaGCTCAGCGGCCTCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGFHKRPGKAQFCLRESTVHSAG*LSGLVS Trigger: GCTGACGAGGCCGCTGAGGCAGCCGGCTGAGTGCAC...CGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TGTGATTGCAGCACTGGGATTGAAGCTGCAGCCACTGGATCTGCAGGATTCCATCCGGACCCTCGGAGATaGAGCGAGGGGGCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CDCSTGIEAAATGSAGFHPDPRR*SEGASP Trigger: AGGGCTGGCCCCCTCGCTGCATCTCCGAGGGTCCGG...ATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAATCCCAGTGCTGCAATCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGCAGCCGGGCGGTaGACTCAGCCGGCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: DSIRGLEKLSSASESPRPEAAGR*TQPAAS Trigger: TGAGGCAGCCGGCTGAGTGCACCGCCCGGCTGCTTC...TGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGAACACCACCAACAGGCACCACCATACCACCCCACCCGCTAGTGCAGAAGCAGAGGGATGTTGAACAGTaGCCCCCAGCAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RTPPTGTTIPPHPLVQKQRDVEQ*PPARSA Trigger: AGCACTCCTTGCTGGGGGGCACTGTTCAACATCCCT...CTGCTTCTGCACTAGCGGGTGGGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | GCTGGGAGAGGAGTCAGAAGGGCTAGGGGGTCACCCGACGGCAGAGGGATGTTGCCCTCTTTCACTTTTTaGCCGACACTAAAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AGRGVRRARGSPDGRGMLPSFTF*PTLKLP Trigger: GGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGG...CAACATCCCTCTGCCGTCGGGTGACCCCCTAGCCCTTCTGACTCCTCTCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | CTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGTGGGGGTGCAAAGATGCGGATaGGGCCCACCTGTAACAGAC | + |
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Preference number: 4 (lower is better) Translates to: LPQRVHVQKSMDWRSSVGVQRCG*GPPVTD Trigger: GTCTGTTACAGGTGGGCCCCATCCGCATCTTTGCAC...CCCCACTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGTGGGGGACCAAGCTGAGCGCTaGCACGTACTCCATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LPQRVHVQKSMDWRSSVGDQAER*HVLHEI Trigger: GATTTCATGGAGTACGTGGCAGCGCTCAGCTTGGTC...CCCCACTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TTGAAGCTGCAGCCACTGGATCTGCAGGATTCCATAAGAGGCCTGGAAAAGCTCGCCCCCTCCTCGTCTTaGTCGCCATTCTGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKLQPLDLQDSIRGLEKLAPSSS*SPFWSL Trigger: CAGGCTCCAGAATGGCGAGCAAGACGAGGAGGGGGC...GAGCTTTTCCAGGCCTCTTATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCCCCAGCAAGGAGTGCTaGCACCAGCTGTCACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPPSKEC*HQLSLR Trigger: TCTGAGTGACAGCTGGTGGCAGCACTCCTTGCTGGG...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAGAGGTGGCACTCGGTGCTaGTCAGCTCCTCCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: FHKRPGKAQFCLRESTSRGGTRC*SAPPLT Trigger: AGTCAGTGGAGGAGCTGAGCAGCACCGAGTGCCACC...TCTGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGTGGGGTTCATGCAATTCTTCTaGCTCAGCCTCCCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LPQRVHVQKSMDWRSSVGFMQFF*LSLPGS Trigger: GCTACCTGGGAGGCTGAGGCAGAAGAATTGCATGAA...CCCCACTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCTTGTCCAGGCTGGAGTaGAGTGGTGTGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPLSRLE*SGVISA Trigger: AGCCGAGATCACACCACTGCACTCCAGCCTGGACAA...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGAACACCACCAACAGGCACCACCATACCACCCCACCCGCTAGTGCAGAAGCAGCTTAAAGCTGAGATGTaGAAAGATGCGGATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RTPPTGTTIPPHPLVQKQLKAEM*KDADGA Trigger: GGCCCCATCCGCATCTTTGCACATCTCAGCTTTAAG...CTGCTTCTGCACTAGCGGGTGGGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCGACCAAGCTGAGCGCTaGCACGTACTCCATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPDQAER*HVLHEI Trigger: GATTTCATGGAGTACGTGGCAGCGCTCAGCTTGGTC...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGGCTCATCGCGGTCAATaGAGCCGTTGCCATCTACAT | + |
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Preference number: 4 (lower is better) Translates to: QFCLRESTSRRAWTGEAQAHRGQ*SRCHLH Trigger: ATGTAGATGGCAACGGCTGCATTGACCGCGATGAGC...CTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAGAACTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAGACCCAGCAAGGAGTGCTaGCACCAGCTGTCACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: FHKRPGKAQFCLRESTSRPSKEC*HQLSLR Trigger: TCTGAGTGACAGCTGGTGGCAGCACTCCTTGCTGGG...TCTGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGGGAAAAGCTCAGTTCTaGCTCAGAGAGTCCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: QFCLRESTSRRAWTGEAQGKAQF*LRESTS Trigger: GGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCC...CTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCTGCCTCCCTGGTTCATaGAATTCTTCTGCCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPCLPGS*NSSASA Trigger: GGCTGAGGCAGAAGAATTGCATGAACCAGGGAGGCA...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | AAGAACACCACCAACAGGCACCACCATACCACCCCACCCGCTAGTGCAGAAGCACAACCTCTGCCTCCCTaGTTCATGCAATTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KNTTNRHHHTTPPASAEAQPLPP*FMQFFC Trigger: GCAGAAGAATTGCATGAACCAGGGAGGCAGAGGTTG...TGCTTCTGCACTAGCGGGTGGGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR TCA 90 bp | TCCCAGAGTGAATGCATGCACATGCATTCAGATTCAGATCTACACTGTCATCTAAGCCCCAAGAGACGCTaGGGGGAGACCCGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSECMHMHSDSDLHCHLSPKRR*GETRTL Trigger: GAGGGTCCGGGTCTCCCCTCAGCGTCTCTTGGGGCT...TAGATGACAGTGTAGATCTGAATCTGAATGCATGTGCATGCATTCACTCTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCACAGGCCCTGTTCGCTaGTCCTCGCCCAAAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPWTLKRRAKPLSSLDSITGPVR*SSPKGV Trigger: GACACCTTTGGGCGAGGAGCAGCGAACAGGGCCTGT...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR GCA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCACTGGTGGCACTCGGTaGTGCTCAGCTCCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: PPWTLKRRAKPLSSLDSITGGTR*CSAPPL Trigger: CAGTGGAGGAGCTGAGCAGCACCGAGTGCCACCAGT...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCGTCAATCAATGAAATGCAAAGCGCACAAGTAGGCTCCAGGGTCCCCATCTGTGGGGAGCCATaGAACACCACATGTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: REASINEMQSAQVGSRVPICGEP*NTTCHQ Trigger: TTGGTGACATGTGGTGTTCCATGGCTCCCCACAGAT...GGGGACCCTGGAGCCTACTTGTGCGCTTTGCATTTCATTGATTGACGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CTGCAGGATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCAGCTCATCGCGGTCAATaGAGCCGTTGCCATCTACAT | + |
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Preference number: 4 (lower is better) Translates to: LQDSIRGLEKLSSASESPAHRGQ*SRCHLH Trigger: ATGTAGATGGCAACGGCTGCATTGACCGCGATGAGC...TGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATCCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TGCATCTCCAACCACCCCACATGCATCACCTTCTTCTCTACATTCGGCCCCGAAATCGGTGAACTCCTCTaGAGTCATGGTGGTATCGCT | + |
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Preference number: 4 (lower is better) Translates to: CISNHPTCITFFSTFGPEIGELL*SHGGIA Trigger: AGCGATACCACCATGACTGCAGAGGAGTTCACCGAT...TTCGGGGCCGAATGTAGAGAAGAAGGTGATGCATGTGGGGTGGTTGGAGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TTGAAGCTGCAGCCACTGGATCTGCAGGATTCCATAAGAGGCCTGGAAAAGCTCGGAAAAGCTCAGTTCTaGCTCAGAGAGTCCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: LKLQPLDLQDSIRGLEKLGKAQF*LRESTS Trigger: GGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCC...GAGCTTTTCCAGGCCTCTTATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TGGATGTGTGATTGCAGCACTGGGATTGAAGCTGCAGCCACTGGATCTGCAGGAGGTCAATGCAGCCGTTaGCATCTACATCATAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: WMCDCSTGIEAAATGSAGGQCSR*HLHHRA Trigger: AGCTCTATGATGTAGATGGCAACGGCTGCATTGACC...TCCTGCAGATCCAGTGGCTGCAGCTTCAATCCCAGTGCTGCAATCACACATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TCTGTGGGGAGCCATGGAACACCACATGTCACCAAGGAGGGGAAGTATAAGGGAGGTCAATGCAGCCGTTaGCATCTACATCATAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SVGSHGTPHVTKEGKYKGGQCSR*HLHHRA Trigger: AGCTCTATGATGTAGATGGCAACGGCTGCATTGACC...TCCCTTATACTTCCCCTCCTTGGTGACATGTGGTGTTCCATGGCTCCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | CTGCAGGATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCAGTTCCACTTCCCAACTaGTATCAGGTGTCACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQDSIRGLEKLSSASESPVPLPN*YQVSLQ Trigger: CTGCAGTGACACCTGATACCAGTTGGGAAGTGGAAC...TGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR TCA 90 bp | CTCAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCTTGCGCAGGCTCTTCTaGAAAAGTATGGATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSASESPRPEEHGLEKLLRRLF*KSMDFF Trigger: GAAGAAATCCATACTTTTTCAGAAGAGCCTGCGCAA...GAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAGAACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR TCA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCATTTGCAACGAGCGATaGGTCGCAGATCTGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PPWTLKRRAKPLSSLDSIICNER*VADLWG Trigger: TCCCCACAGATCTGCGACTCATCGCTCGTTGCAAAT...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | ATTCTATCTAGGGTTAAGACAAGAACACCACCAACAGGCACCACCATACCACCCTTCCCTCCATCACGTTaGCCATTGCTCAGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ILSRVKTRTPPTGTTIPPFPPSR*PLLRPS Trigger: TGAAGGCCTGAGCAATGGGCAACGTGATGGAGGGAA...GGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCTTGTCTTAACCCTAGATAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR GCA 90 bp | TCTGTGGGGAGCCATGGAACACCACATGTCACCAAGGAGGGGAAGTATAAGGGAATACATCACAGAGAATaGATCTCCAACCACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: SVGSHGTPHVTKEGKYKGIHHRE*ISNHPT Trigger: TGTGGGGTGGTTGGAGATGCATTCTCTGTGATGTAT...TCCCTTATACTTCCCCTCCTTGGTGACATGTGGTGTTCCATGGCTCCCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | ACCCTCTTTCACTTTTTGGCCGACACTAAAGCTTCCCAGAGTGAATGCATGCACGCGCCCGGCCTGAGTTaGGTATTCTTAAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TLFHFLADTKASQSECMHAPGLS*VFLKLR Trigger: TCTCAGCTTTAAGAATACCCAACTCAGGCCGGGCGC...GTGCATGCATTCACTCTGGGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCATCGGTGAACTCCTCTaGAGTCATGGTGGTATCGCT | + |
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Preference number: 4 (lower is better) Translates to: PPWTLKRRAKPLSSLDSIIGELL*SHGGIA Trigger: AGCGATACCACCATGACTGCAGAGGAGTTCACCGAT...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | TTGAAGCTGCAGCCACTGGATCTGCAGGATTCCATAAGAGGCCTGGAAAAGCTCGAATGGATGTGTGATTaGAGCACTGGGATTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LKLQPLDLQDSIRGLEKLEWMCD*STGIEA Trigger: AGCTTCAATCCCAGTGCTGCAATCACACATCCATTC...GAGCTTTTCCAGGCCTCTTATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372958.2 ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAACTCAAACTCACAGATaGCAGAGAACTGGTGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: DSIRGLEKLSSASESPRPTQTHR*QRTGVK Trigger: CTTAACACCAGTTCTCTGGCATCTGTGAGTTTGAGT...TGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372958.2 |
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| CDS-3UTR GCA 90 bp | ATTCTATCTAGGGTTAAGACAAGAACACCACCAACAGGCACCACCATACCACCCTCCAACCACCCCACATaGATCACCTTCTTCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: ILSRVKTRTPPTGTTIPPSNHPT*ITFFST Trigger: TGTAGAGAAGAAGGTGATGCATGTGGGGTGGTTGGA...GGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCTTGTCTTAACCCTAGATAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CCA 90 bp | TTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAGAATTTACCACCACACCTaGCAAAACATCCCATCCTTA | + |
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Preference number: 4 (lower is better) Translates to: FHKRPGKAQFCLRESTSRIYHHT*QNIPSL Trigger: TAAGGATGGGATGTTTTGCCAGGTGTGGTGGTAAAT...TCTGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | GTGACACATACATCACAGAGAATGCATCTCCAACCACCCCACATGCATCACCTTGAATGGATGTGTGATTaGAGCACTGGGATTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTHTSQRMHLQPPHMHHLEWMCD*STGIEA Trigger: AGCTTCAATCCCAGTGCTGCAATCACACATCCATTC...AAGGTGATGCATGTGGGGTGGTTGGAGATGCATTCTCTGTGATGTATGTGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR GCA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCGCTTCCCAGAGTGAATaGATGCACATGCATTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PPWTLKRRAKPLSSLDSIASQSE*MHMHSD Trigger: ATCTGAATGCATGTGCATGCATTCACTCTGGGAAGC...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS GCA 90 bp | GCGGAGCTTCTGTTCCACCTTCCCCTTGAGGACCAAGCTGAGCGCTaGCACGTACTCCATGAAATCAATGTAGCCGTCCTGGGCGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: AELLFHLPLEDQAER*HVLHEINVAVLGEG Trigger: CCCCTCGCCCAGGACGGCTACATTGATTTCATGGAGTACGTGGCAGCGCTCAGCTTGGTCCTCAAGGGGAAGGTGGAACAGAAGCTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | CTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGTGGGGTTGCCTGGGCTTGTCTaGAACCCCTCGGCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPQRVHVQKSMDWRSSVGLPGLV*NPSAQG Trigger: CCCTTGAGCCGAGGGGTTCAAGACAAGCCCAGGCAA...CCCCACTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | CAGTTCTGCCTCAGAGAGTCCACGTCCAGAAGAGCATGGACTGGAGAAGCTCAGCGCGCCCGGCCTGAGTaGGGTATTCTTAAAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QFCLRESTSRRAWTGEAQRARPE*GILKAE Trigger: CTCAGCTTTAAGAATACCCAACTCAGGCCGGGCGCG...CTGAGCTTCTCCAGTCCATGCTCTTCTGGACGTGGACTCTCTGAGGCAGAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | AGAACACCACCAACAGGCACCACCATACCACCCCACCCGCTAGTGCAGAAGCAGAGGGATACCCCAAATTaGCACCTAAGAATGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: RTPPTGTTIPPHPLVQKQRDTPN*HLRMLL Trigger: CAGGAGCATTCTTAGGTGCAAATTTGGGGTATCCCT...CTGCTTCTGCACTAGCGGGTGGGGTGGTATGGTGGTGCCTGTTGGTGGTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | TGTGATTGCAGCACTGGGATTGAAGCTGCAGCCACTGGATCTGCAGGATTCCATCCAGGGATAGATTATTaGCAACGAGCGATGAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: CDCSTGIEAAATGSAGFHPGIDY*QRAMSR Trigger: GCGACTCATCGCTCGTTGCAAATAATCTATCCCTGG...ATGGAATCCTGCAGATCCAGTGGCTGCAGCTTCAATCCCAGTGCTGCAATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | GATTCCATAAGAGGCCTGGAAAAGCTCAGTTCTGCCTCAGAGAGTCCACGTCCAACCCTCTTTCACTTTTaGGCCGACACTAAAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: DSIRGLEKLSSASESPRPTLFHF*ADTKAS Trigger: GGAAGCTTTAGTGTCGGCCAAAAAGTGAAAGAGGGT...TGGACGTGGACTCTCTGAGGCAGAACTGAGCTTTTCCAGGCCTCTTATGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | TTCCTGTTCAAAGTCAAAGGTCACCTCTGTGATGCTGCCTCTGAGTCAGACGCCAGAAATGAGGATTTTTaGCAGAACCACCCACCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FLFKVKGHLCDAASESDARNEDF*QNHPPS Trigger: AGAGGGTGGGTGGTTCTGCAAAAAATCCTCATTTCT...GGCGTCTGACTCAGAGGCAGCATCACAGAGGTGACCTTTGACTTTGAACAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | CCACCATGGACCCTAAAGAGGCGAGCTAAGCCTCTGAGTTCATTAGATTCTATCTTGAAGAAGCTATGTTaGTTTGTTTTCCCTTACTGG | + |
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Preference number: 5 (lower is better) Translates to: PPWTLKRRAKPLSSLDSILKKLC*FVFPYW Trigger: CCAGTAAGGGAAAACAAACAAACATAGCTTCTTCAA...GATAGAATCTAATGAACTCAGAGGCTTAGCTCGCCTCTTTAGGGTCCATGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS-3UTR CAA 90 bp | TCCCAGAGTGAATGCATGCACATGCATTCAGATTCAGATCTACACTGTCATCTAAGAAGCTATGTTTGTTaGTTTTCCCTTACTGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: SQSECMHMHSDSDLHCHLRSYVC*FSLTGV Trigger: TACCCCAGTAAGGGAAAACAAACAAACATAGCTTCT...TAGATGACAGTGTAGATCTGAATCTGAATGCATGTGCATGCATTCACTCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS TCA 72 bp | AAGGCTCCGCCCATCTCGGCAAGCCCCAAGAGACGCTaGGGGGAGACCCGGACCCTCGGAGATGCAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: KAPPISASPKRR*GETRTLGDAAR Trigger: CCTCGCTGCATCTCCGAGGGTCCGGGTCTCCCCTCAGCGTCTCTTGGGGCTTGCCGAGATGGGCGGAGCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679182.1 |
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| CDS CAA 72 bp | GCCAGAGAACTGGTGTTAAGAGTCTCCACTAAATCCTaGCAGCCCCAGGGGAGACTGTACCCTCCCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ARELVLRVSTKS*QPQGRLYPPSR Trigger: GCGGCTGGGAGGGTACAGTCTCCCCTGGGGCTGCAAGGATTTAGTGGAGACTCTTAACACCAGTTCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654459.1 |
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| CDS CAA 90 bp | CTCACAGATGCCAGAGAACTGGTGTTAAGAGTCTCCACTAAATCCTaGCAGCCCCAGGGGAGACTGTACCCTCCCAGCCGCACATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LTDARELVLRVSTKS*QPQGRLYPPSRTCE Trigger: CTCACATGTGCGGCTGGGAGGGTACAGTCTCCCCTGGGGCTGCAAGGATTTAGTGGAGACTCTTAACACCAGTTCTCTGGCATCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654459.1 |
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| CDS CAA 72 bp | TCATCACACCTTGCACATCCTGGACCAGGGCCTTTCTaGATGGTGAGGTGGAACTTCTGGTGGTCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSHLAHPGPGPF*MVRWNFWWSGR Trigger: CCTCCCTGACCACCAGAAGTTCCACCTCACCATCAAGAAAGGCCCTGGTCCAGGATGTGCAAGGTGTGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654459.1 |
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| CDS CAA 90 bp | CCTGTGATTTCATCACACCTTGCACATCCTGGACCAGGGCCTTTCTaGATGGTGAGGTGGAACTTCTGGTGGTCAGGGAGGACTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PVISSHLAHPGPGPF*MVRWNFWWSGRTLG Trigger: GCCAAGAGTCCTCCCTGACCACCAGAAGTTCCACCTCACCATCAAGAAAGGCCCTGGTCCAGGATGTGCAAGGTGTGATGAAATCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654459.1 |
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