Pregenerated sensors for GTSF1L (Homo sapiens)
Ensembl gene IDs: ENSG00000124196Ensembl transcript IDs: ENST00000373003.2, ENST00000373005.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATaGATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: HVFYSDALHVLP*IDEACAPSSAG Trigger: GCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | GCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCTGGGGTTCTTTCTCCTaGACGATGCCAGGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: ALHVLPCIDEACAPSSAGWGSFS*TMPGGT Trigger: AGTACCACCTGGCATCGTGCAGGAGAAAGAACCCCA...GCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | GCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCCTGCACGATGCCAGGTaGTACTGGAATCTGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ALHVLPCIDEACAPSSAGLHDAR*YWNLLS Trigger: ACTCAGCAGATTCCAGTACCACCTGGCATCGTGCAG...GCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | CATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCACAGGGTGAGACCTGCTaGGTGTCATCGTTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: HCTFFHALMRRVLLPQLAQGETC*VSSFCS Trigger: AGAGCAGAACGATGACACCCAGCAGGTCTCACCCTG...TGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR TCA 90 bp | GATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGTACTGGAATCTGCTaGGTGGGATTCGGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DALHVLPCIDEACAPSSAGTGIC*VGFGGE Trigger: CTCACCACCGAATCCCACTCAGCAGATTCCAGTACC...AGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTCTGGAATCTGCTGAGTaGGATTCGGTGGTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: LHVLPCIDEACAPSSAGSLESAE*DSVVRI Trigger: GATCCTCACCACCGAATCCCACTCAGCAGATTCCAG...ACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTGGTCTGAGGATCTTCTaGGGACTGGTCTCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LHVLPCIDEACAPSSAGSGLRIF*GLVSLA Trigger: AGCAAGAGAGACCAGTCCCCAGAAGATCCTCAGACC...ACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | TATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCAGGCAGGGTGAGACCTaGTGGGTGTCATCGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YSDALHVLPCIDEACAPSRQGET*WVSSFC Trigger: GCAGAACGATGACACCCAGCAGGTCTCACCCTGCCT...GGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | GATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTCCCAGTTTTGGCCCTTaGGATTCTGTAGGTGACGGT | + |
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Preference number: 4 (lower is better) Translates to: DALHVLPCIDEACAPSSAPSFGP*DSVGDG Trigger: ACCGTCACCTACAGAATCCCAAGGGCCAAAACTGGG...AGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR TCA 90 bp | CTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGAGGCTTCTGGCTCCATaGGAAATTCTTGAAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LMHCTFFHALMRRVLLPQRLLAP*EILEAG Trigger: CCCTGCTTCAAGAATTTCTCATGGAGCCAGAAGCCT...CTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR TCA 90 bp | TTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGGCTGGGAAGGCAGGGTaGGACCTGCTGGGTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: LHVFYSDALHVLPCIDEAAGKAG*DLLGVI Trigger: GATGACACCCAGCAGGTCTCACCCTGCCTTCCCAGC...CGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR GCA 90 bp | TTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTAGAGAGATGAGGAGCTaGCAAAAGCAGCTACACAGA | + |
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Preference number: 4 (lower is better) Translates to: LHVLPCIDEACAPSSAGSREMRS*QKQLHR Trigger: TCTGTGTAGCTGCTTTTGGCAGCTCCTCATCTCTCT...ACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR GCA 90 bp | ATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGCTTTCTCCTGCACGATaGCAGGTGGTACTGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: MHCTFFHALMRRVLLPQLLSPAR*QVVLES Trigger: AGATTCCAGTACCACCTGGCATCGTGCAGGAGAAAG...CAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | ATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGGCAGGCGTTGTATTTaGAGGTGGCCATCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: MHCTFFHALMRRVLLPQLGRRCI*RWPSFW Trigger: CCAAAAAGATGGCCACCTGCAAATACAACGCCTGCC...CAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | CTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGTGGGTGTCATCGTTCTaGTCTGAACTAGGAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LMHCTFFHALMRRVLLPQWVSSF*SELGGL Trigger: CAGTCCTCCTAGTTCAGAGCAGAACGATGACACCCA...CTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | TTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTTTGCACGTTCTTCCATaGATTGATGAGGCGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LHVLPCIDEACAPSSAGSLHVLP*IDEACA Trigger: AGCACACGCCTCATCAATGCATGGAAGAACGTGCAA...ACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCATCCTCTGCCCAGTTTTaGCCCTTGGGATTCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SDALHVLPCIDEACAPSSSSAQF*PLGFCR Trigger: CCTACAGAATCCCAAGGGCCAAAACTGGGCAGAGGA...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCACTTTCTCCTGCACGATaGCAGGTGGTACTGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: SDALHVLPCIDEACAPSSLSPAR*QVVLES Trigger: AGATTCCAGTACCACCTGGCATCGTGCAGGAGAAAG...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCATGGGTGTCATCGTTCTaGTCTGAACTAGGAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SDALHVLPCIDEACAPSSWVSSF*SELGGL Trigger: CAGTCCTCCTAGTTCAGAGCAGAACGATGACACCCA...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTTGATGGGGACCACGTaGCAGGCGTTGTATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YSDALHVLPCIDEACAPSLMGTT*QALYLQ Trigger: CTGCAAATACAACGCCTGCCACGTGGTCCCCATCAA...GGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTTCCAGATATCGGGGCTaGGAAGGCAGGGTGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: FILMHCTFFHALMRRVLLSRYRG*EGRVRP Trigger: AGGTCTCACCCTGCCTTCCCAGCCCCGATATCTGGA...AAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTTGCTCCTTCCTCAGCTaGCAGTTTACTGTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ILMHCTFFHALMRRVLLPCSFLS*QFTVLV Trigger: GACCAGGACAGTAAACTGCCAGCTGAGGAAGGAGCA...AGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCGGTACTGGAATCTGCTaGGTGGGATTCGGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SFILMHCTFFHALMRRVLGTGIC*VGFGGE Trigger: CTCACCACCGAATCCCACTCAGCAGATTCCAGTACC...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTCCACAGCGCTCCTGTTaGCACAAACAGCCTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: FYSDALHVLPCIDEACAPPQRSC*HKQPHV Trigger: AACATGAGGCTGTTTGTGTCAACAGGAGCGCTGTGG...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCTTTACTGTCCTGGTCTaGGGATCTTCTGGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: SFILMHCTFFHALMRRVLFTVLV*GSSGDW Trigger: CCAGTCCCCAGAAGATCCTCAGACCAGGACAGTAAA...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | TGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGATGGAGTTGTCCTCTaGCCAGTTTTGGCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CMSFILMHCTFFHALMRRDGVVL*PVLALG Trigger: CCCAAGGGCCAAAACTGGGCAGAGGACAACTCCATC...ACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCTGGGGTTCTTTCTCCTaGACGATGCCAGGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: SFILMHCTFFHALMRRVLWGSFS*TMPGGT Trigger: AGTACCACCTGGCATCGTGCAGGAGAAAGAACCCCA...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | GCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCTTTATTCTGATGCATTaGACGTTCTTCCATGCATTG | + |
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Preference number: 4 (lower is better) Translates to: ALHVLPCIDEACAPSSAGFILMH*TFFHAL Trigger: CAATGCATGGAAGAACGTGCAATGCATCAGAATAAA...GCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | GTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCTGCACGATGCCAGGTaGTACTGGAATCTGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VFYSDALHVLPCIDEACALHDAR*YWNLLS Trigger: ACTCAGCAGATTCCAGTACCACCTGGCATCGTGCAG...AGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCAGGACAAACACATGCTaGCAATTAGCGCCATCGACA | + |
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Preference number: 4 (lower is better) Translates to: YSDALHVLPCIDEACAPSRTNTC*QLAPST Trigger: TGTCGATGGCGCTAATTGCCAGCATGTGTTTGTCCT...GGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTGGTCTGAGGATCTTCTaGGGACTGGTCTCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FYSDALHVLPCIDEACAPGLRIF*GLVSLA Trigger: AGCAAGAGAGACCAGTCCCCAGAAGATCCTCAGACC...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTGGCAGTTTACTGTCCTaGTCTGAGGATCTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FYSDALHVLPCIDEACAPGSLLS*SEDLLG Trigger: CCCCAGAAGATCCTCAGACCAGGACAGTAAACTGCC...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCGGATTAGAAGAGAGATaGGGAGCTGCCAAAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFILMHCTFFHALMRRVLGLEER*GAAKSS Trigger: GCTGCTTTTGGCAGCTCCTCATCTCTCTTCTAATCC...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGGTTCCTCCAGATTTTTaGTGGGGACCACGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCMSFILMHCTFFHALMRVPPDF*WGPRGR Trigger: CCTGCCACGTGGTCCCCATCAAAAATCTGGAGGAAC...CCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTACTGGTCTCTCTTGCTaGCTCTTTCGTGTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: ILMHCTFFHALMRRVLLPTGLSC*LFRVIF Trigger: GAAAATGACACGAAAGAGTCAGCAAGAGAGACCAGT...AGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | GTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTGGCAGGCGTTGTATTTaGAGGTGGCCATCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VFYSDALHVLPCIDEACAGRRCI*RWPSFW Trigger: CCAAAAAGATGGCCACCTGCAAATACAACGCCTGCC...AGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | CATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAAATTTCAAAGGCTTCTaGCTCCATGAGAAATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HCTFFHALMRRVLLPQLANFKGF*LHEKFL Trigger: CAAGAATTTCTCATGGAGCCAGAAGCCTTTGAAATT...TGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCGATGCCAGGTGGTACTaGAATCTGCTGAGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: SFILMHCTFFHALMRRVLDARWY*NLLSGI Trigger: AATCCCACTCAGCAGATTCCAGTACCACCTGGCATC...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGGATGCCAGGTGGTACTaGAATCTGCTGAGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: MSFILMHCTFFHALMRRVDARWY*NLLSGI Trigger: AATCCCACTCAGCAGATTCCAGTACCACCTGGCATC...CACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGTTGATGGGGACCACGTaGCAGGCGTTGTATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCMSFILMHCTFFHALMRLMGTT*QALYLQ Trigger: CTGCAAATACAACGCCTGCCACGTGGTCCCCATCAA...CCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | ACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGCCACAGCGCTCCTGTTaGCACAAACAGCCTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: TLHVFYSDALHVLPCIDEPQRSC*HKQPHV Trigger: AACATGAGGCTGTTTGTGTCAACAGGAGCGCTGTGG...CTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTCATCGTTCTGCTCTaGACTAGGAGGACTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: CMSFILMHCTFFHALMRRVIVLL*TRRTDF Trigger: AAAGTCAGTCCTCCTAGTTCAGAGCAGAACGATGAC...ACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGACTGGTCTCTCTTGCTaGCTCTTTCGTGTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LHVFYSDALHVLPCIDEATGLSC*LFRVIF Trigger: GAAAATGACACGAAAGAGTCAGCAAGAGAGACCAGT...CGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | TTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGTTTACTGTCCTGGTCTaGGGATCTTCTGGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LLCMSFILMHCTFFHALMFTVLV*GSSGDW Trigger: CCAGTCCCCAGAAGATCCTCAGACCAGGACAGTAAA...CATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCGTTGTATTTGCAGGTaGCCATCTTTTTGGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FILMHCTFFHALMRRVLLRCICR*PSFWLS Trigger: AGAAAGCCAAAAAGATGGCCACCTGCAAATACAACG...AAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | TTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGGGCAGTTTACTGTCCTaGTCTGAGGATCTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLCMSFILMHCTFFHALMGSLLS*SEDLLG Trigger: CCCCAGAAGATCCTCAGACCAGGACAGTAAACTGCC...CATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGTCCATGAGAAATTCTTaGAGCAGGGTATCTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LCMSFILMHCTFFHALMRSMRNS*SRVSHC Trigger: GCAGTGAGATACCCTGCTTCAAGAATTTCTCATGGA...CCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR TCA 90 bp | ACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGTCATCGTTCTGCTCTaGACTAGGAGGACTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: TLHVFYSDALHVLPCIDEVIVLL*TRRTDF Trigger: AAAGTCAGTCCTCCTAGTTCAGAGCAGAACGATGAC...CTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | ACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGTTGCACGTTCTTCCATaGATTGATGAGGCGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLHVFYSDALHVLPCIDELHVLP*IDEACA Trigger: AGCACACGCCTCATCAATGCATGGAAGAACGTGCAA...CTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCAGAACTATAGCAGATaGAAGAGCCAAAAACCCACA | + |
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Preference number: 4 (lower is better) Translates to: LCMSFILMHCTFFHALMRQNYSR*KSQKPT Trigger: TGTGGGTTTTTGGCTCTTGCATCTGCTATAGTTCTG...CCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR GCA 90 bp | TTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTTTTATTCTGATGCATTaGACGTTCTTCCATGCATTG | + |
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Preference number: 4 (lower is better) Translates to: FILMHCTFFHALMRRVLLFILMH*TFFHAL Trigger: CAATGCATGGAAGAACGTGCAATGCATCAGAATAAA...AAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGAACAGAGTTAGCAAATaGCACCCGAGACAGAACTAT | + |
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Preference number: 4 (lower is better) Translates to: LCMSFILMHCTFFHALMRNRVSK*HPRQNY Trigger: ATAGTTCTGTCTCGGGTGCCATTTGCTAACTCTGTT...CCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | TTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGCGGAAATGCTTCTTGTaGAGAAGCCCTTTTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCMSFILMHCTFFHALMRKCFL*RSPFVR Trigger: TCTTACAAAAGGGCTTCTCCACAAGAAGCATTTCCG...CATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CCA 90 bp | TTTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATCGTTGTATTTGCAGGTaGCCATCTTTTTGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLHVFYSDALHVLPCIDRCICR*PSFWLS Trigger: AGAAAGCCAAAAAGATGGCCACCTGCAAATACAACG...ATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS GCA 90 bp | CCATCGACATTCCAGATATCGGGGCTGGGAAGGCAGGGTGAGACCTaGTGGGTGTCATCGTTCTGCTCTGAACTAGGAGGACTGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: PSTFQISGLGRQGET*WVSSFCSELGGLTF Trigger: GAAAGTCAGTCCTCCTAGTTCAGAGCAGAACGATGACACCCAGCAGGTCTCACCCTGCCTTCCCAGCCCCGATATCTGGAATGTCGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CAA 90 bp | GCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCTGGCAGGCGTTGTATTaGCAGGTGGCCATCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALHVLPCIDEACAPSSAGWQALY*QVAIFL Trigger: CAAAAAGATGGCCACCTGCAAATACAACGCCTGCCA...GCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTTGGCAGGCGTTGTATTaGCAGGTGGCCATCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHVLPCIDEACAPSSAGSWQALY*QVAIFL Trigger: CAAAAAGATGGCCACCTGCAAATACAACGCCTGCCA...ACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | CATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCACAGGTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HCTFFHALMRRVLLPQLAQVAIF*AFLGFF Trigger: AAAGAACCCCAAGAAAGCCAAAAAGATGGCCACCTG...TGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGGGGACTGGTCTCTCTaGCTGACTCTTTCGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDALHVLPCIDEACAPSSGDWSL*LTLSCH Trigger: ATGACACGAAAGAGTCAGCAAGAGAGACCAGTCCCC...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CCA 90 bp | CTCCTTCCTCAGCTGGCAGTTTACTGTCCTGGTCTGAGGATCTTCTaGGGACTGGTCTCTCTTGCTGACTCTTTCGTGTCATTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLPQLAVYCPGLRIF*GLVSLADSFVSFSQ Trigger: TTGTGAAAATGACACGAAAGAGTCAGCAAGAGAGACCAGTCCCCAGAAGATCCTCAGACCAGGACAGTAAACTGCCAGCTGAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | CATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCACTCCATGAGAAATTCTaGAAGCAGGGTATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HCTFFHALMRRVLLPQLALHEKF*KQGISL Trigger: CAGTGAGATACCCTGCTTCAAGAATTTCTCATGGAG...TGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CAA 90 bp | GTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTACCACGTGGCAGGCGTaGTATTTGCAGGTGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VFYSDALHVLPCIDEACATTWQA*YLQVAI Trigger: GATGGCCACCTGCAAATACAACGCCTGCCACGTGGT...AGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTGTTCCTCCAGATTTTaGATGGGGACCACGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSDALHVLPCIDEACAPSCSSRF*MGTTWQ Trigger: CTGCCACGTGGTCCCCATCAAAAATCTGGAGGAACA...GGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAACGTTCTTCCATGCATaGATGAGGCGTGTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDALHVLPCIDEACAPSSTFFHA*MRRVLL Trigger: AAGGAGCACACGCCTCATCAATGCATGGAAGAACGT...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCTCAAAAACCCACAGCCGCTaGACTCACGGATATACTATG | + |
|
Preference number: 5 (lower is better) Translates to: SDALHVLPCIDEACAPSSKTHSR*THGYTM Trigger: CATAGTATATCCGTGAGTCAAGCGGCTGTGGGTTTT...TGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CAA 90 bp | TATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTCCCAGGTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YSDALHVLPCIDEACAPSQVAIF*AFLGFF Trigger: AAAGAACCCCAAGAAAGCCAAAAAGATGGCCACCTG...GGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCTGTTCCTCCAGATTTTaGATGGGGACCACGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFILMHCTFFHALMRRVLCSSRF*MGTTWQ Trigger: CTGCCACGTGGTCCCCATCAAAAATCTGGAGGAACA...GAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CCA 90 bp | TGGGATTCGGTGGTGAGGATCATAAGGGCAAATTTCAAAGGCTTCTaGCTCCATGAGAAATTCTTGAAGCAGGGTATCTCACTGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WDSVVRIIRANFKGF*LHEKFLKQGISLLE Trigger: CTCTAGCAGTGAGATACCCTGCTTCAAGAATTTCTCATGGAGCCAGAAGCCTTTGAAATTTGCCCTTATGATCCTCACCACCGAATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CAA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTGTAAGAAGGATGGAGTaGTCCTCTGCCCAGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FYSDALHVLPCIDEACAPVRRME*SSAQFW Trigger: CCAAAACTGGGCAGAGGACAACTCCATCCTTCTTAC...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGACCACGTGGCAGGCGTaGTATTTGCAGGTGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLHVFYSDALHVLPCIDETTWQA*YLQVAI Trigger: GATGGCCACCTGCAAATACAACGCCTGCCACGTGGT...CTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | CATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTACGTTCTTCCATGCATaGATGAGGCGTGTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HVFYSDALHVLPCIDEACTFFHA*MRRVLL Trigger: AAGGAGCACACGCCTCATCAATGCATGGAAGAACGT...ACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS GCA 90 bp | TTTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATaGATTGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: FTLHVFYSDALHVLP*IDEACAPSSAGSLL Trigger: CAGTAAACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTATCTTTTTGGCTTTCTaGGGGTTCTTTCTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FYSDALHVLPCIDEACAPIFLAF*GFFLLH Trigger: GTGCAGGAGAAAGAACCCCAAGAAAGCCAAAAAGAT...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TTTACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGGGGACTGGTCTCTCTaGCTGACTCTTTCGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FTLHVFYSDALHVLPCIDGDWSL*LTLSCH Trigger: ATGACACGAAAGAGTCAGCAAGAGAGACCAGTCCCC...ATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGATCTTTTTGGCTTTCTaGGGGTTCTTTCTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLHVFYSDALHVLPCIDEIFLAF*GFFLLH Trigger: GTGCAGGAGAAAGAACCCCAAGAAAGCCAAAAAGAT...CTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TTTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTTTTATTCTGATGCATaGCACGTTCTTCCATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FYSDALHVLPCIDEACAPFYSDA*HVLPCI Trigger: AATGCATGGAAGAACGTGCAATGCATCAGAATAAAA...AGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS-3UTR CAA 90 bp | TTTATTCTGATGCATTGCACGTTCTTCCATGCATTGATGAGGCGTGTGCTCCTTTTTTATTCTGATGCATaGCACGTTCTTCCATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FILMHCTFFHALMRRVLLFYSDA*HVLPCI Trigger: AATGCATGGAAGAACGTGCAATGCATCAGAATAAAA...AAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CCA 72 bp | GCGTGTGCTCCTTCCTCAGCTGGCAGTTTACTGTCCTaGTCTGAGGATCTTCTGGGGACTGGTCTCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACAPSSAGSLLS*SEDLLGTGLSC Trigger: GCAAGAGAGACCAGTCCCCAGAAGATCCTCAGACCAGGACAGTAAACTGCCAGCTGAGGAAGGAGCACACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 90 bp | ACAGCGCTCCTGTTGACACAAACAGCCTCATGTTCCTCCAGATTTTaGATGGGGACCACGTGGCAGGCGTTGTATTTGCAGGTGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TALLLTQTASCSSRF*MGTTWQALYLQVAI Trigger: GATGGCCACCTGCAAATACAACGCCTGCCACGTGGTCCCCATCAAAAATCTGGAGGAACATGAGGCTGTTTGTGTCAACAGGAGCGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CCA 72 bp | CAGCTGGCAGTTTACTGTCCTGGTCTGAGGATCTTCTaGGGACTGGTCTCTCTTGCTGACTCTTTCGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QLAVYCPGLRIF*GLVSLADSFVS Trigger: TGACACGAAAGAGTCAGCAAGAGAGACCAGTCCCCAGAAGATCCTCAGACCAGGACAGTAAACTGCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 72 bp | ACGTGGCAGGCGTTGTATTTGCAGGTGGCCATCTTTTaGGCTTTCTTGGGGTTCTTTCTCCTGCACGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: TWQALYLQVAIF*AFLGFFLLHDA Trigger: GGCATCGTGCAGGAGAAAGAACCCCAAGAAAGCCAAAAAGATGGCCACCTGCAAATACAACGCCTGCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 90 bp | ACGTGGCAGGCGTTGTATTTGCAGGTGGCCATCTTTTTGGCTTTCTaGGGGTTCTTTCTCCTGCACGATGCCAGGTGGTACTGGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: TWQALYLQVAIFLAF*GFFLLHDARWYWNL Trigger: CAGATTCCAGTACCACCTGGCATCGTGCAGGAGAAAGAACCCCAAGAAAGCCAAAAAGATGGCCACCTGCAAATACAACGCCTGCCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 72 bp | GCGTTGTATTTGCAGGTGGCCATCTTTTTGGCTTTCTaGGGGTTCTTTCTCCTGCACGATGCCAGGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ALYLQVAIFLAF*GFFLLHDARWY Trigger: GTACCACCTGGCATCGTGCAGGAGAAAGAACCCCAAGAAAGCCAAAAAGATGGCCACCTGCAAATACAACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 72 bp | CTGTTGACACAAACAGCCTCATGTTCCTCCAGATTTTaGATGGGGACCACGTGGCAGGCGTTGTATTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTQTASCSSRF*MGTTWQALYLQ Trigger: CTGCAAATACAACGCCTGCCACGTGGTCCCCATCAAAAATCTGGAGGAACATGAGGCTGTTTGTGTCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CCA 72 bp | GCCAAAAGCAGCTACACAGAGAACAGAGTTAGCAAATaGCACCCGAGACAGAACTATAGCAGATGCAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AKSSYTENRVSK*HPRQNYSRCKS Trigger: GCTCTTGCATCTGCTATAGTTCTGTCTCGGGTGCCATTTGCTAACTCTGTTCTCTGTGTAGCTGCTTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373003.2 |
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| CDS CAA 90 bp | CTTTGCATGTCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATaGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTTTACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCMSFILMHCTFFHA*MRRVLLPQLAVYCP Trigger: AGGACAGTAAACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGACATGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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| CDS CAA 72 bp | TCTTTTATTCTGATGCATTGCACGTTCTTCCATGCATaGATGAGGCGTGTGCTCCTTCCTCAGCTGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SFILMHCTFFHA*MRRVLLPQLAV Trigger: AACTGCCAGCTGAGGAAGGAGCACACGCCTCATCAATGCATGGAAGAACGTGCAATGCATCAGAATAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373003.2 ENST00000373005.2 |
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