Pregenerated sensors for GTSF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170627Ensembl transcript IDs: ENST00000305879.8, ENST00000546575.1, ENST00000546739.5, ENST00000546931.5, ENST00000548538.1, ENST00000549083.1, ENST00000552336.5, ENST00000552395.5, ENST00000552397.5
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAAAATaGGAACCCACTGGTAGAAGAAGAAGCAACAGTCTTCTAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: KSQGVYHSIIRLGGK*EPTGRRRSNSLLGS Trigger: AGACCCTAGAAGACTGTTGCTTCTTCTTCTACCAGTGGGTTCTCATTTTCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGTGTGCTTGTCAGTTTaGAAAGTCACAGGGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGVCLSV*KVTGSL Trigger: TAAACTCCCTGTGACTTTCCAAACTGACAAGCACAC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGTATTCAGTTACTGTaGATTTCCATCAAGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGIQLL*ISIKPF Trigger: AAAAGGCTTGATGGAAATGCACAGTAACTGAATACC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546931.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATCGCAAGGAGGGCACTaGCAAGTGCTCTCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGSQGGH*QVLSAR Trigger: TCTGGCTGAGAGCACTTGGCAGTGCCCTCCTTGCGA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCGCAAGGAGGGCACTaGCAAGTGCTCTCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSQGGH*QVLSAR Trigger: TCTGGCTGAGAGCACTTGGCAGTGCCCTCCTTGCGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATGTGCCCCAGACAAATaGGGTGCTGGTCTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGCAPDK*GAGLLP Trigger: TGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATGTGCCCCAGACAAATaGGGTGCTGGTCTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGCAPDK*GAGLLP Trigger: TGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGAGGGCACTGCCAAGTaGTCTCAGCCAGAGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGEGTAK*SQPESL Trigger: AAGAGACTCTGGCTGAGAGCACTTGGCAGTGCCCTC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGCTCGAGGAACCTGGTaGCGAGCATTGAAGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGARGTW*RALKGQ Trigger: TTGTCCCTTCAATGCTCGCCACCAGGTTCCTCGAGC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGCTCGAGGAACCTGGTaGCGAGCATTGAAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGARGTW*RALKGQ Trigger: TTGTCCCTTCAATGCTCGCCACCAGGTTCCTCGAGC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATCAGCTCGAGGAACCTaGTGGCGAGCATTGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGSARGT*WRALKG Trigger: TCCCTTCAATGCTCGCCACCAGGTTCCTCGAGCTGA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCAGCTCGAGGAACCTaGTGGCGAGCATTGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSARGT*WRALKG Trigger: TCCCTTCAATGCTCGCCACCAGGTTCCTCGAGCTGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGCAGGAGGATCACTTaGAGCCAGGAGTTTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGRRIT*SQEFET Trigger: AGTCTCAAACTCCTGGCTTCAAGTGATCCTCCTGCC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACCCAGACAAATGGGGTaGTGGTCTGCTCCCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGPRQMG*WSAPTN Trigger: ATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACCCAGACAAATGGGGTaGTGGTCTGCTCCCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGPRQMG*WSAPTN Trigger: ATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACAGAGTAGTGAGTTGTaGCCCAGACAAATGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGQSSEL*PRQMGC Trigger: GCACCCCATTTGTCTGGGGCACAACTCACTACTCTG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACAGAGTAGTGAGTTGTaGCCCAGACAAATGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGQSSEL*PRQMGC Trigger: GCACCCCATTTGTCTGGGGCACAACTCACTACTCTG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATCGTGCCATTGCACTTaGCCTGGACAATGGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGSCHCT*PGQWSE Trigger: CTCACTCCATTGTCCAGGCCAAGTGCAATGGCACGA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGGAACTCGCATGCCTaGAGCCAGGTTATTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGGNSHA*SQVILM Trigger: CATAAGAATAACCTGGCTTCAGGCATGCGAGTTCCC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGGAACTCGCATGCCTaGAGCCAGGTTATTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGNSHA*SQVILM Trigger: CATAAGAATAACCTGGCTTCAGGCATGCGAGTTCCC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAAATCCAAGTGCTCGGTaGACACACACCTTCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGNPSAR*THTFLT Trigger: TGTGAGGAAGGTGTGTGTCCACCGAGCACTTGGATT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305879.8 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACATACGGCAGAGATTTaGGAACTCGCATGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGHTAEI*ELACLK Trigger: CTTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACATACGGCAGAGATTTaGGAACTCGCATGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGHTAEI*ELACLK Trigger: CTTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGCTCCTGGTTTGGTTaGCAACATCTTGCTCAATAC | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGSWFG*QHLAQY Trigger: GTATTGAGCAAGATGTTGTCAACCAAACCAGGAGCC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGCTCCTGGTTTGGTTaGCAACATCTTGCTCAATAC | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGGSWFG*QHLAQY Trigger: GTATTGAGCAAGATGTTGTCAACCAAACCAGGAGCC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAAATGGGGTGCTGGTCTaGTCCCACAAATCTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGNGVLV*SHKSLS Trigger: GGATAAAGATTTGTGGGAGCAGACCAGCACCCCATT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAAGACAAATGGGGTGCTaGTCTGCTCCCACAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGRQMGC*SAPTNL Trigger: AAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAAGACAAATGGGGTGCTaGTCTGCTCCCACAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGRQMGC*SAPTNL Trigger: AAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAATTTGGGAACTCGCATaGCTGAAGCCAGGTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGIWELA*LKPGYS Trigger: AGAATAACCTGGCTTCAGGCATGCGAGTTCCCAAAT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAATTTGGGAACTCGCATaGCTGAAGCCAGGTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGIWELA*LKPGYS Trigger: AGAATAACCTGGCTTCAGGCATGCGAGTTCCCAAAT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGAAGCTGAATCCAAGTaGTGTAATCCTAGCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGEAESK*CNPSTL Trigger: CAGAGTGCTAGGATTACAGCACTTGGATTCAGCTTC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACTAAGGCTCCTGGTTTaGTTGACAACATCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGLRLLV*LTTSCS Trigger: TGAGCAAGATGTTGTCAACCAAACCAGGAGCCTTAG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATTCCTCTCTAGGACCTaGAAATGCTGGAAGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGFLSRT*KCWKSL Trigger: CAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGAAACCTGCAAGCCCTaGTTTGATGGTTTTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGETCKP*FDGFCH Trigger: ATGACAAAAACCATCAAATCAGGGCTTGCAGGTTTC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGAAACCTGCAAGCCCTaGTTTGATGGTTTTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGETCKP*FDGFCH Trigger: ATGACAAAAACCATCAAATCAGGGCTTGCAGGTTTC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATACTCATTCCCTCTATaGACTAAGGGAAAACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGYSFPL*TKGKPL Trigger: GAGAGGTTTTCCCTTAGTGCATAGAGGGAATGAGTA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCCATTGTTTTTCCATaGCAGAACATACGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSIVFP*QNIRQR Trigger: TCTCTGCCGTATGTTCTGCCATGGAAAAACAATGGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305879.8 ENST00000552397.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGTGTGCTTGTCAGTTTaGAAAGTCACAGGGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGVCLSV*KVTGSL Trigger: TAAACTCCCTGTGACTTTCCAAACTGACAAGCACAC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACTTGCAACATCAGGATaGTTCTTTCTGCACTTGATA | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGLATSG*FFLHLI Trigger: TATCAAGTGCAGAAAGAATCATCCTGATGTTGCAAG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACTTGCAACATCAGGATaGTTCTTTCTGCACTTGATA | + |
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Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGLATSG*FFLHLI Trigger: TATCAAGTGCAGAAAGAATCATCCTGATGTTGCAAG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCAACCCTTCCAATATaGTTGGAAACACTAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSTLPI*LETLVH Trigger: GTGAACTAGTGTTTCCAAGCATATTGGAAGGGTTGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCTGTCATCACAGCTTaGGATATGATGACTAATTTC | + |
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Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSVITA*DMMTNF Trigger: GAAATTAGTCATCATATCTCAAGCTGTGATGACAGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATGGTTGACAACATCTTaGTCAATACAACTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGWLTTS*SIQLLS Trigger: TGACAGAAGTTGTATTGAGCAAGATGTTGTCAACCA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGAACTGTCCATATTATaGATAACAGAGTCACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGELSIL*ITESQE Trigger: CTCTTGTGACTCTGTTATCCATAATATGGACAGTTC...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCTTCAGTGCTAAAGTaGCAATACTTTAAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSSVLK*QYFKLL Trigger: GAGAAGCTTAAAGTATTGCCACTTTAGCACTGAAGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGTATTCAGTTACTGTaGATTTCCATTGTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGIQLL*ISIVFP Trigger: TGGAAAAACAATGGAAATGCACAGTAACTGAATACC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305879.8 ENST00000552397.5 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATATCAAAGGTTTATTTaGAAGCTTCTGAGTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGYQRFI*KLLSMR Trigger: CCTCATACTCAGAAGCTTCCAAATAAACCTTTGATA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATATCAAAGGTTTATTTaGAAGCTTCTGAGTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGYQRFI*KLLSMR Trigger: CCTCATACTCAGAAGCTTCCAAATAAACCTTTGATA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS GCA 90 bp | TGCTCCCACAAATCTTTATCCCAGTCTTCATCGCAAGGAGGGCACTaGCAAGTGCTCTCAGCCAGAGTCTCTTGTCTAAGGCTCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CSHKSLSQSSSQGGH*QVLSARVSCLRLLV Trigger: AACCAGGAGCCTTAGACAAGAGACTCTGGCTGAGAGCACTTGGCAGTGCCCTCCTTGCGATGAAGACTGGGATAAAGATTTGTGGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS CCA 90 bp | CGCAGGGCTGTTGTTGTCAGAGTAGTGAGTTGTGCCCCAGACAAATaGGGTGCTGGTCTGCTCCCACAAATCTTTATCCCAGTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RRAVVVRVVSCAPDK*GAGLLPQIFIPVFI Trigger: GATGAAGACTGGGATAAAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTGACAACAACAGCCCTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS GCA 90 bp | GGCTGTTGTTGTCAGAGTAGTGAGTTGTGCCCCAGACAAATGGGGTaGTGGTCTGCTCCCACAAATCTTTATCCCAGTCTTCATCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCCQSSELCPRQMG*WSAPTNLYPSLHRK Trigger: CTTGCGATGAAGACTGGGATAAAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTGACAACAACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS TCA 90 bp | GTGCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTGGAAGTCTTTaGCAGACAGTATACACTCAACCCTTCCAATATGCTTGGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VQSCSSLGPGNAGSL*QTVYTQPFQYAWKH Trigger: GTGTTTCCAAGCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549083.1 |
||
| CDS CCA 90 bp | CTGAATCCAAGTGCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTaGAAGTCTTTGACAGACAGTATACACTCAACCCTTCCAATATGC | + |
|
Preference number: 5 (lower is better) Translates to: LNPSAVLFLSRTWKC*KSLTDSIHSTLPIC Trigger: GCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGCACTTGGATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549083.1 |
||
| CDS CCA 90 bp | ATAGGCAGGTTACCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTaGAAGTCTTTGACAGACAGTATACACTCAACCCTTCCAATATGC | + |
|
Preference number: 5 (lower is better) Translates to: IGRLPVLFLSRTWKC*KSLTDSIHSTLPIC Trigger: GCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTAACCTGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS TCA 90 bp | TTGGTTGACAACATCTTGCTCAATACAACTTCTGTCATCACAGCTTaGGATATGATGACTAATTTCAGCTCGAGGAACCTGGTGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVDNILLNTTSVITA*DMMTNFSSRNLVAS Trigger: GCTCGCCACCAGGTTCCTCGAGCTGAAATTAGTCATCATATCTCAAGCTGTGATGACAGAAGTTGTATTGAGCAAGATGTTGTCAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS TCA 90 bp | TACCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTGGAAGTCTTTaGCAGACAGTATACACTCAACCCTTCCAATATGCTTGGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: YQSCSSLGPGNAGSL*QTVYTQPFQYAWKH Trigger: GTGTTTCCAAGCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS CCA 90 bp | ATGAAGAAGCTGAATCCAAGTGCAGTCTTGTTCCTCTCTAGGACCTaGAAATGCTGGAAGTCTTTGACAGACAGTATACACTCAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MKKLNPSAVLFLSRT*KCWKSLTDSIHSTL Trigger: AAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGCACTTGGATTCAGCTTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549083.1 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAGGCAGGTTACCAGTCTaGTTCCTCTCTAGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGGRLPV*FLSRTW Trigger: CCAGGTCCTAGAGAGGAACAAGACTGGTAACCTGCC...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS CCA 90 bp | AAAATACAGATAGGCAGGTTACCAGTCTTGTTCCTCTCTAGGACCTaGAAATGCTGGAAGTCTTTGACAGACAGTATACACTCAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KIQIGRLPVLFLSRT*KCWKSLTDSIHSTL Trigger: AAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTAACCTGCCTATCTGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAACCTGGTGGCGAGCATaGAAGGGACAAGTAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGTWWRA*KGQVAN Trigger: ATTGGCTACTTGTCCCTTCAATGCTCGCCACCAGGT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAACCTGGTGGCGAGCATaGAAGGGACAAGTAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGTWWRA*KGQVAN Trigger: ATTGGCTACTTGTCCCTTCAATGCTCGCCACCAGGT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACTCAGCCAGAGTCTCTaGTCTAAGGCTCCTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGLSQSL*SKAPGL Trigger: CAAACCAGGAGCCTTAGACAAGAGACTCTGGCTGAG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGACTCAGCCAGAGTCTCTaGTCTAAGGCTCCTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGLSQSL*SKAPGL Trigger: CAAACCAGGAGCCTTAGACAAGAGACTCTGGCTGAG...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAACATACGGCAGAGATTaGGGAACTCGCATGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGTYGRD*GTRMPE Trigger: TTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATGT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAACATACGGCAGAGATTaGGGAACTCGCATGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGTYGRD*GTRMPE Trigger: TTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATGT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACTTGAAGCCAGGAGTTaGAGACTAGCCTGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGLEARS*RLAWQQ Trigger: TTGTTGCCAGGCTAGTCTCAAACTCCTGGCTTCAAG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS CCA 90 bp | CTAGTGAGGTTTCACCTCCTCTCATCCCAATCTTCAGTGCTAAAGTaGCAATACTTTAAGCTTCTCCAATTAATACTCATTCCCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LVRFHLLSSQSSVLK*QYFKLLQLILIPSM Trigger: CATAGAGGGAATGAGTATTAATTGGAGAAGCTTAAAGTATTGCCACTTTAGCACTGAAGATTGGGATGAGAGGAGGTGAAACCTCACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000549083.1 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGACCTGCAAGCCCTGATTaGATGGTTTTTGTCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGPASPD*MVFVIG Trigger: CCCTATGACAAAAACCATCAAATCAGGGCTTGCAGG...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATCTAAGGCTCCTGGTTaGGTTGACAACATCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGSKAPG*VDNILL Trigger: GAGCAAGATGTTGTCAACCAAACCAGGAGCCTTAGA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATGTTCTGTAACTATGTaGCTCGCAGGGCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGCSVTM*LAGLLL Trigger: CAACAACAGCCCTGCGAGCAACATAGTTACAGAACA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAAGGGCCACACTAACATaGTCCCTTTTTCTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGRATLT*SLFLVR Trigger: CCTCACTAGAAAAAGGGACAATGTTAGTGTGGCCCT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGAACCCTTCCAATATGCTaGGAAACACTAGTTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGTLPIC*ETLVHH Trigger: ATGGTGAACTAGTGTTTCCAAGCATATTGGAAGGGT...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATTGGTTGACAACATCTaGCTCAATACAACTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGLVDNI*LNTTSV Trigger: GACAGAAGTTGTATTGAGCAAGATGTTGTCAACCAA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305879.8 ENST00000546931.5 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAGGATACTGTGCATTTCCATaGTTTTTCCATGGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: CQFGKSQGVYHSIIRLGGYCAFP*FFHGRT Trigger: TGTTCTGCCATGGAAAAACAATGGAAATGCACAGTA...TCCTCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305879.8 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATACTGTGCATTTCCATaGTTTTTCCATGGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGYCAFP*FFHGRT Trigger: TGTTCTGCCATGGAAAAACAATGGAAATGCACAGTA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305879.8 ENST00000552397.5 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGAAAATGCTGGAAGTCTTaGACAGACAGTATACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGKCWKS*TDSIHS Trigger: TGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTT...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS TCA 90 bp | CAGGATTTCTCATTGTTAGCCAAAATTAGTCTGTTTTACAAAGGGTaGGAAGACTCTAGAGATGCTGTTTATAAAGGGTTCTTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QDFSLLAKISLFYKG*EDSRDAVYKGFFVT Trigger: AGTGACAAAGAACCCTTTATAAACAGCATCTCTAGAGTCTTCTCACCCTTTGTAAAACAGACTAATTTTGGCTAACAATGAGAAATCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546739.5 ENST00000548538.1 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCAGTTTGGAAAGTCACAGGGAGTTTACCATTCTATAATTAGATTAGGATCAAGAGAATCTGAATaGTTTTTCCATGGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ACQFGKSQGVYHSIIRLGSRESE*FFHGRT Trigger: TGTTCTGCCATGGAAAAACAATTCAGATTCTCTTGA...TCCTAATCTAATTATAGAATGGTAAACTCCCTGTGACTTTCCAAACTGACAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546931.5 |
||
| CDS GCA 72 bp | TGCTCGCAGGGCTGTTGTTGTCAGAGTAGTGAGTTGTaGCCCAGACAAATGGGGTGCTGGTCTGCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CSQGCCCQSSEL*PRQMGCWSAPT Trigger: TGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTGACAACAACAGCCCTGCGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS CAA 72 bp | AGGAGGGCACTGCCAAGTGCTCTCAGCCAGAGTCTCTaGTCTAAGGCTCCTGGTTTGGTTGACAACATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRALPSALSQSL*SKAPGLVDNIL Trigger: CAAGATGTTGTCAACCAAACCAGGAGCCTTAGACAAGAGACTCTGGCTGAGAGCACTTGGCAGTGCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS GCA 72 bp | AAATCTTTATCCCAGTCTTCATCGCAAGGAGGGCACTaGCAAGTGCTCTCAGCCAGAGTCTCTTGTCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSLSQSSSQGGH*QVLSARVSCLR Trigger: CCTTAGACAAGAGACTCTGGCTGAGAGCACTTGGCAGTGCCCTCCTTGCGATGAAGACTGGGATAAAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS GCA 72 bp | TGTCAGAGTAGTGAGTTGTGCCCCAGACAAATGGGGTaGTGGTCTGCTCCCACAAATCTTTATCCCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CQSSELCPRQMG*WSAPTNLYPSL Trigger: AAGACTGGGATAAAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS CCA 72 bp | CAGAGTAGTGAGTTGTGCCCCAGACAAATGGGGTGCTaGTCTGCTCCCACAAATCTTTATCCCAGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QSSELCPRQMGC*SAPTNLYPSLH Trigger: ATGAAGACTGGGATAAAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
||
| CDS CCA 72 bp | CTGAATCCAAGTGCAGTCTTGTTCCTCTCTAGGACCTaGAAATGCTGGAAGTCTTTGACAGACAGTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: LNPSAVLFLSRT*KCWKSLTDSIH Trigger: GTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGCACTTGGATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549083.1 |
||
| CDS CCA 72 bp | ATAGGCAGGTTACCAGTCTTGTTCCTCTCTAGGACCTaGAAATGCTGGAAGTCTTTGACAGACAGTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: IGRLPVLFLSRT*KCWKSLTDSIH Trigger: GTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTAACCTGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
||
| CDS CAA 90 bp | AGTGCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTGGAAGTCTTaGACAGACAGTATACACTCAACCCTTCCAATATGCTTGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: SAVLFLSRTWKCWKS*TDSIHSTLPICLET Trigger: TGTTTCCAAGCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549083.1 |
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| CDS CAA 90 bp | TTTCCTCCTGGGTTCTTAAAAATACAGATAGGCAGGTTACCAGTCTaGTTCCTCTCTAGGACCTGGAAATGCTGGAAGTCTTTGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: FPPGFLKIQIGRLPV*FLSRTWKCWKSLTD Trigger: GTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTAACCTGCCTATCTGTATTTTTAAGAACCCAGGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS CAA 90 bp | TTACCAGTCTTGTTCCTCTCTAGGACCTGGAAATGCTGGAAGTCTTaGACAGACAGTATACACTCAACCCTTCCAATATGCTTGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: LPVLFLSRTWKCWKS*TDSIHSTLPICLET Trigger: TGTTTCCAAGCATATTGGAAGGGTTGAGTGTATACTGTCTGTCAAAGACTTCCAGCATTTCCAGGTCCTAGAGAGGAACAAGACTGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552397.5 |
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| CDS TCA 72 bp | CAGAACATACGGCAGAGATTTGGGAACTCGCATGCCTaGAGCCAGGTTATTCTTATGTTCTGTAACTATGTT | + |
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Preference number: 6 (lower is better) Translates to: QNIRQRFGNSHA*SQVILMFCNYV Trigger: AACATAGTTACAGAACATAAGAATAACCTGGCTTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305879.8 ENST00000546575.1 ENST00000546931.5 ENST00000552395.5 ENST00000552397.5 |
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| CDS TCA 72 bp | AAGGGACAAGTAGCCAATTTGCTTGCAACATCAGGATaGTTCTGTGGAACCAAAATTAAGGGATCTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KGQVANLLATSG*FCGTKIKGSVS Trigger: ACTGACAGATCCCTTAATTTTGGTTCCACAGAATCATCCTGATGTTGCAAGCAAATTGGCTACTTGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546575.1 |
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| CDS TCA 72 bp | AGCCACCTAAAAATTAGCTCAAACAGTAGCACAGACTaGAATCAAGAGAATCTGAATCTAGGGGCAACATTG | + |
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Preference number: 6 (lower is better) Translates to: SHLKISSNSSTD*NQENLNLGATL Trigger: CAATGTTGCCCCTAGATTCAGATTCTCTTGATTTCAGTCTGTGCTACTGTTTGAGCTAATTTTTAGGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552336.5 |
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| CDS CCA 72 bp | TTTCACCTCCTCTCATCCCAATCTTCAGTGCTAAAGTaGCAATACTTTAAGCTTCTCCAATTAATACTCATT | + |
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Preference number: 6 (lower is better) Translates to: FHLLSSQSSVLK*QYFKLLQLILI Trigger: AATGAGTATTAATTGGAGAAGCTTAAAGTATTGCCACTTTAGCACTGAAGATTGGGATGAGAGGAGGTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000549083.1 ENST00000552397.5 |
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