Pregenerated sensors for GTSE1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000277232Ensembl transcript IDs: ENST00000617229.1, ENST00000623117.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCGTTCGCAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTTGCTaGCCACTGACCCGTCTACCAGTCCTGTCCTTGCGTCTCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: PRSQAKAQARSVLSC*PLTRLPVLSLRLHG Trigger: GCCATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTGCGAACGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 90 bp | AGACTCCTCTTCCTGCATCCTCCTCCATCCCGCTTAGTGACACTTTaGCGTGGGTGGAGCCCCTCATTTGATCCTCAAGCCCCCGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RLLFLHPPPSRLVTL*RGWSPSFDPQAPEV Trigger: CACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAGCGGGATGGAGGAGGATGCAGGAAGAGGAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 90 bp | TCCATCCCGCTTAGTGACACTTTGCCGTGGGTGGAGCCCCTCATTTaGTCCTCAAGCCCCCGAGGTGGGTATTATACCTCGTTCGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SIPLSDTLPWVEPLI*SSSPRGGYYTSFAG Trigger: GCCTGCGAACGAGGTATAATACCCACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAGCGGGATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 90 bp | GTCCTGTCCTTGCGTCTCCATGGCTCAGGTCAGGGTTATCCTATCTaGTTCCCACCTCTCTCCAACACATGCACTCCCCAAGGCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VLSLRLHGSGQGYPI*FPPLSNTCTPQGRL Trigger: GAGCCTGCCTTGGGGAGTGCATGTGTTGGAGAGAGGTGGGAAGCAGATAGGATAACCCTGACCTGAGCCATGGAGACGCAAGGACAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 90 bp | TTTGCCGTGGGTGGAGCCCCTCATTTGATCCTCAAGCCCCCGAGGTaGGTATTATACCTCGTTCGCAGGCAAAGGCTCAAGCGAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: FAVGGAPHLILKPPR*VLYLVRRQRLKRGQ Trigger: CTGACCTCGCTTGAGCCTTTGCCTGCGAACGAGGTATAATACCCACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 90 bp | TTGCTGCCCACTGACCCGTCTACCAGTCCTGTCCTTGCGTCTCCATaGCTCAGGTCAGGGTTATCCTATCTGCTTCCCACCTCTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLPTDPSTSPVLASP*LRSGLSYLLPTSLQ Trigger: TTGGAGAGAGGTGGGAAGCAGATAGGATAACCCTGACCTGAGCCATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 90 bp | ATACCTCGTTCGCAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTTaGTGCCCACTGACCCGTCTACCAGTCCTGTCCTTGCGTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: IPRSQAKAQARSVLS*CPLTRLPVLSLRLH Trigger: ATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTGCGAACGAGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 90 bp | TTCCTGCATCCTCCTCCATCCCGCTTAGTGACACTTTGCCGTGGGTaGAGCCCCTCATTTGATCCTCAAGCCCCCGAGGTGGGTATTATA | + |
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Preference number: 5 (lower is better) Translates to: FLHPPPSRLVTLCRG*SPSFDPQAPEVGII Trigger: TATAATACCCACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAGCGGGATGGAGGAGGATGCAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 90 bp | TCTCCCATGAGCAGACATCCCCAGGATGAGCTGAGGGGAATGCAATaGGCAGGCCAAACTCTTTCCAAGCTGTTTGACCACACCCACCTA | + |
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Preference number: 5 (lower is better) Translates to: SPMSRHPQDELRGMQ*AGQTLSKLFDHTHL Trigger: TAGGTGGGTGTGGTCAAACAGCTTGGAAAGAGTTTGGCCTGCTCATTGCATTCCCCTCAGCTCATCCTGGGGATGTCTGCTCATGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 90 bp | TTCACTACTGTTAGTAACAGCTCGCGCGCGCTGCTTCACAGCAGGTaGGTGAGCCTACTTTTAGTCTTCCCATCGACACCCTTAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: FTTVSNSSRALLHSR*VSLLLVFPSTPLDG Trigger: GCCATCTAAGGGTGTCGATGGGAAGACTAAAAGTAGGCTCACCCACCTGCTGTGAAGCAGCGCGCGCGAGCTGTTACTAACAGTAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 90 bp | CACCTACTATGTGCTGACATGATACAGGGAGAGGAGTATCAGGAATaGCTGTTGGGGATCCCTCTGCCATTCTCCCATGAGCAGACATCC | + |
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Preference number: 5 (lower is better) Translates to: HLLCADMIQGEEYQE*LLGIPLPFSHEQTS Trigger: GGATGTCTGCTCATGGGAGAATGGCAGAGGGATCCCCAACAGTCATTCCTGATACTCCTCTCCCTGTATCATGTCAGCACATAGTAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 90 bp | GAAATGAATCTGCCATACATAGGCCACACCTACTATGTGCTGACATaGTACAGGGAGAGGAGTATCAGGAATGACTGTTGGGGATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: EMNLPYIGHTYYVLT*YRERSIRNDCWGSL Trigger: GAGGGATCCCCAACAGTCATTCCTGATACTCCTCTCCCTGTATCATGTCAGCACATAGTAGGTGTGGCCTATGTATGGCAGATTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 72 bp | CCCGCCACGCCCTCGGCGGTCCTCAGGCCTTGGCGGTaGGGGAAGCCCGCCAAGGGCGACGGTTCCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PATPSAVLRPWR*GKPAKGDGSPP Trigger: TGGAGGGGAACCGTCGCCCTTGGCGGGCTTCCCCAACCGCCAAGGCCTGAGGACCGCCGAGGGCGTGGCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | CTGTGCAGCTCCGGCAATGAGTCTCCCTCAGGTCTCTaGGTCAGCCGGCGCCCCAGTGCGTGCCTCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LCSSGNESPSGL*VSRRPSACLGG Trigger: GCCCCCGAGGCACGCACTGGGGCGCCGGCTGACCCAGAGACCTGAGGGAGACTCATTGCCGGAGCTGCACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 72 bp | TCCCCTCCAGCCCCACAGGCTGTGCAGCTCCGGCAATaGGTCTCCCTCAGGTCTCTGGGTCAGCCGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPPAPQAVQLRQ*VSLRSLGQPAP Trigger: GGGCGCCGGCTGACCCAGAGACCTGAGGGAGACTCATTGCCGGAGCTGCACAGCCTGTGGGGCTGGAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | CCTCCTCCATCCCGCTTAGTGACACTTTGCCGTGGGTaGAGCCCCTCATTTGATCCTCAAGCCCCCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPPSRLVTLCRG*SPSFDPQAPEV Trigger: CACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAGCGGGATGGAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | GGAGTGATTGGTATGGATGATGCAAAACCAGGGACATaGGACCCAGAAGTGCCCGAGCCAGCCTGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GVIGMDDAKPGT*DPEVPEPAWKA Trigger: GGCCTTCCAGGCTGGCTCGGGCACTTCTGGGTCCCATGTCCCTGGTTTTGCATCATCCATACCAATCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617229.1 ENST00000623117.1 |
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| CDS GCA 72 bp | CAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTTGCTaGCCACTGACCCGTCTACCAGTCCTGTCCTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: QAKAQARSVLSC*PLTRLPVLSLR Trigger: ACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 72 bp | TCGCAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTTaGTGCCCACTGACCCGTCTACCAGTCCTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQAKAQARSVLS*CPLTRLPVLSL Trigger: CAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 72 bp | TTCCTGCATCCTCCTCCATCCCGCTTAGTGACACTTTaGCGTGGGTGGAGCCCCTCATTTGATCCTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: FLHPPPSRLVTL*RGWSPSFDPQA Trigger: GGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAGCGGGATGGAGGAGGATGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | GTTAGTAACAGCTCGCGCGCGCTGCTTCACAGCAGGTaGGTGAGCCTACTTTTAGTCTTCCCATCGACACCC | + |
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Preference number: 6 (lower is better) Translates to: VSNSSRALLHSR*VSLLLVFPSTP Trigger: GGGTGTCGATGGGAAGACTAAAAGTAGGCTCACCCACCTGCTGTGAAGCAGCGCGCGCGAGCTGTTACTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | ACTGACCCGTCTACCAGTCCTGTCCTTGCGTCTCCATaGCTCAGGTCAGGGTTATCCTATCTGCTTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: TDPSTSPVLASP*LRSGLSYLLPT Trigger: GGTGGGAAGCAGATAGGATAACCCTGACCTGAGCCATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CCA 72 bp | GGTGGAGCCCCTCATTTGATCCTCAAGCCCCCGAGGTaGGTATTATACCTCGTTCGCAGGCAAAGGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GGAPHLILKPPR*VLYLVRRQRLK Trigger: CTTGAGCCTTTGCCTGCGAACGAGGTATAATACCCACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 72 bp | AGTTGCTGCCCACTGACCCGTCTACCAGTCCTGTCCTaGCGTCTCCATGGCTCAGGTCAGGGTTATCCTATC | + |
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Preference number: 6 (lower is better) Translates to: SCCPLTRLPVLS*RLHGSGQGYPI Trigger: GATAGGATAACCCTGACCTGAGCCATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 90 bp | TATACCTCGTTCGCAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTaGCTGCCCACTGACCCGTCTACCAGTCCTGTCCTTGCGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YTSFAGKGSSEVSLK*LPTDPSTSPVLASP Trigger: TGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTGCGAACGAGGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 72 bp | CTTAGTGACACTTTGCCGTGGGTGGAGCCCCTCATTTaGTCCTCAAGCCCCCGAGGTGGGTATTATACCTCG | + |
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Preference number: 6 (lower is better) Translates to: LSDTLPWVEPLI*SSSPRGGYYTS Trigger: CGAGGTATAATACCCACCTCGGGGGCTTGAGGATCAAATGAGGGGCTCCACCCACGGCAAAGTGTCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 72 bp | CCTCTGCCATTCTCCCATGAGCAGACATCCCCAGGATaGGCTGAGGGGAATGCAATGAGCAGGCCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: PLPFSHEQTSPG*AEGNAMSRPNS Trigger: AGAGTTTGGCCTGCTCATTGCATTCCCCTCAGCTCATCCTGGGGATGTCTGCTCATGGGAGAATGGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 72 bp | TTCGCAGGCAAAGGCTCAAGCGAGGTCAGTCTTAAGTaGCTGCCCACTGACCCGTCTACCAGTCCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FAGKGSSEVSLK*LPTDPSTSPVL Trigger: AAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGACCTCGCTTGAGCCTTTGCCTGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 90 bp | TCAGTCTTAAGTTGCTGCCCACTGACCCGTCTACCAGTCCTGTCCTaGCGTCTCCATGGCTCAGGTCAGGGTTATCCTATCTGCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SVLSCCPLTRLPVLS*RLHGSGQGYPICFP Trigger: TGGGAAGCAGATAGGATAACCCTGACCTGAGCCATGGAGACGCAAGGACAGGACTGGTAGACGGGTCAGTGGGCAGCAACTTAAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 72 bp | TGTGCTGACATGATACAGGGAGAGGAGTATCAGGAATaGCTGTTGGGGATCCCTCTGCCATTCTCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: CADMIQGEEYQE*LLGIPLPFSHE Trigger: CTCATGGGAGAATGGCAGAGGGATCCCCAACAGTCATTCCTGATACTCCTCTCCCTGTATCATGTCAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS TCA 72 bp | CTGCCATACATAGGCCACACCTACTATGTGCTGACATaGTACAGGGAGAGGAGTATCAGGAATGACTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LPYIGHTYYVLT*YRERSIRNDCW Trigger: CCAACAGTCATTCCTGATACTCCTCTCCCTGTATCATGTCAGCACATAGTAGGTGTGGCCTATGTATGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS GCA 72 bp | TTCTGCAGGCTTTTCAGGAAGTATGGTGCTGGCATCTaGTTCTGGTGCAACCTCAGGAAGCTTAAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: FCRLFRKYGAGI*FWCNLRKLKIM Trigger: CATGATCTTAAGCTTCCTGAGGTTGCACCAGAAGCAGATGCCAGCACCATACTTCCTGAAAAGCCTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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| CDS CAA 72 bp | AGAAGGGGAGGTCTTAGACTCTTAAATAACCAGATCTaGTGTGAACTAAGCAAGAACTCATCACCAAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RRGGLRLLNNQI*CELSKNSSPRG Trigger: TCCCCTTGGTGATGAGTTCTTGCTTAGTTCACACAAGATCTGGTTATTTAAGAGTCTAAGACCTCCCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623117.1 |
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