RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTSE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000075218

Ensembl transcript IDs: ENST00000454366.2, ENST00000466510.5, ENST00000479645.1, ENST00000491863.1

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGACAGGTTCTCACATTaGTGCCCAGGCTGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLDRFSH*CPGWSA
Trigger: TGCACTCCAGCCTGGGCACCAATGTGAGAACCTGTC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR TCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCAGCCTGCATCTCCTTaGGCTCAGGCCATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFQPASP*AQAILP
Trigger: TGGGAGGATGGCCTGAGCTCAAGGAGATGCAGGCTG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCAGCCCACTGCAGCCTaGATCTCCTTGAGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: ENSSFRVTEASHSSPENGQPTAA*ISLSSG
Trigger: GCCTGAGCTCAAGGAGATGCAGGCTGCAGTGGGCTG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCTGGTCCCGAACTCCTaGGCTCAAGTAATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: ENSSFRVTEASHSSPENGLVPNS*AQVIRP
Trigger: TGGGCGGATTACTTGAGCCCAGGAGTTCGGGACCAG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCACAATCACAGCCCACTaGAGCCTGCATCTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFTITAH*SLHLLE
Trigger: CTCAAGGAGATGCAGGCTGCAGTGGGCTGTGATTGT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCACAAGTGTAAGCCACTaGGACCAGCCTAAAGCTTGT +
Preference number: 2 (lower is better)
Translates to: ENSSFRVTEASHSSPENGTSVSH*DQPKAC
Trigger: ACAAGCTTTAGGCTGGTCGCAGTGGCTTACACTTGT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCCTAAAGCTTGTTTCTaGGGGTTGAAAACCACTTTA +
Preference number: 2 (lower is better)
Translates to: ENSSFRVTEASHSSPENGPKACF*GLKTTL
Trigger: TAAAGTGGTTTTCAACCCTCAGAAACAAGCTTTAGG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454366.2
3UTR-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCAGCCTGCATCTCCTaGAGCTCAGGCCATCCTCCC +
Preference number: 3 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFAACIS*SSGHPP
Trigger: GGGAGGATGGCCTGAGCTCAAGGAGATGCAGGCTGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCCTGCCCGGCAGGCTaGAGGCTCATCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPCPAG*RLIAAA
Trigger: GGCGGCCGCGATGAGCCTTCAGCCTGCCGGGCAGGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGCCGGCTGGCGGGTGTaGGCAAGGCTGACACACGCC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLAGWRV*ARLTHA
Trigger: GGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCAGAGCAGCGCCGGCTaGCGGGTGTGGGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLQSSAG*RVWARL
Trigger: CAGCCTTGCCCACACCCGCCAGCCGGCGCTGCTCTG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTTGCCCTGGCCCAAGTaGCTTCCGGCGGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLPWPK*LPAAGT
Trigger: TGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCAGGGATCGCCCGCTTaGCCTGGCCCAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLQGSPA*PGPSGF
Trigger: GAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCCTGCCAACTGACGTaGACGACTGCGGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPCQLT*TTAAAV
Trigger: CACAGCGGCCGCAGTCGTGCACGTCAGTTGGCAGGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTGGTGCTGGCCCAGATaGGCGTCTAACCGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLWCWPR*ASNRGA
Trigger: AGCACCCCGGTTAGACGCTCATCTGGGCCAGCACCA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTTGGCAGCTTGGGCTaGCTGGTTCCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLGSLG*LVPAAA
Trigger: AGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCGACTGCGGCCGCTGTaGCCGCGAAAGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLRLRPL*PRKLWC
Trigger: ACACCAAAGCTTTCGCGGGCACAGCGGCCGCAGTCG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGAGAGCCCACGGCCCTaGGCATCGTTTTGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLESPRP*ASFWGS
Trigger: TGACCCCCAAAACGATGCCCAGGGCCGTGGGCTCTC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGGAACGTCTCCGAGCTaGCACACACAGGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLGTSPS*HTQGRA
Trigger: GGCTCTCCCCTGTGTGTGCCAGCTCGGAGACGTTCC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCAGCCCACTGCAGCCTaGATCTCCTTGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLQPTAA*ISLSSG
Trigger: GCCTGAGCTCAAGGAGATGCAGGCTGCAGTGGGCTG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGAGGGTCTTCAGGCTTaGCAGCTTGGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLEGLQA*QLGLPG
Trigger: ACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTGACCAAGCGCAACTaGAGTTCAGCCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLTKRN*SSATGR
Trigger: GCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCCTGGGCATCGTTTTaGGGGTCATCGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPWASF*GSSVEG
Trigger: GCCTTCCACCGATGACCCCCAAAACGATGCCCAGGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCGAAAGCTTTGGTGTTaGGCTGTCCGGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLRKLWC*AVRGVT
Trigger: GGTGACTCCCCGGACAGCTCAACACCAAAGCTTTCG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGGGAGAACATCCCGGTaGGATTCCTTCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLGRTSR*DSFSAG
Trigger: CCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTAACCGGGGTGCTGTaGACAGTGACCCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLTGVL*TVTLPT
Trigger: AGTTGGCAGGGTCACTGTCCACAGCACCCCGGTTAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTGGAGTGTTTGTCATaGGGTCGATCAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLECLS*GRSEAC
Trigger: GCAGGCCTCTGATCGACCTCATGACAAACACTCCAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCGAGGAGGACTTCCTTaGGAGATTGCTGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLRGGLP*EIAGRA
Trigger: GGCTCTACCAGCAATCTCGCAAGGAAGTCCTCCTCG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCAGGTCAATGAGGGGCTaGCTTGCAGCATCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLRSMRG*LAASGV
Trigger: CACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCT...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTGTCCCACCACCGGTaGAGGTTTGGCCACATTTTT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLSHHR*RFGHIF
Trigger: AAAAATGTGGCCAAACCTTCACCGGTGGTGGGACAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCTGGTTCCGGCTGCTaGTCTCAATGTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPGSGC*SQCVKP
Trigger: TGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTCATTGCAGAGTTCTTaGGGGGCTCAGAGGAACGTC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLSLQSS*GAQRNV
Trigger: GACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTCCTACAGCCACGTGTaGTTCTGGGGTATCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLSYSHV*FWGIAE
Trigger: TTCTGCGATACCCCAGAAGCACACGTGGCTGTAGGA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCAGTGCATGATTCCCTaGGCAAAGCATGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLQCMIP*AKHEQS
Trigger: ACTCTGCTCATGCTTTGCCCAGGGAATCATGCACTG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCGAGTGGTTCCAGTTTaGTATCTACAAGAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLRVVPV*YLQEEP
Trigger: AGGCTCTTCTTGTAGATATCAAACTGGAACCACTCG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCACTTGCAAATTCACTTaGTTTAGCTTTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLTCKFT*FSFAHC
Trigger: GCAGTGGGCAAAGCTAAATCAAGTGAATTTGCAAGT...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCAATCTGTCTTTCTGTTaGTCTCCCTTGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLNLSFC*SPLLVQ
Trigger: CTGAACCAACAAGGGAGAGCAACAGAAAGACAGATT...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCCTGCAGGCAGAGCTaGCCGCAGCATGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFACRQS*PQHGGS
Trigger: GGACCCGCCATGCTGCGGCCAGCTCTGCCTGCAGGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCGGCGGCCGGCACATTaGCAGCACCCGGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGRRPAH*QHPGQV
Trigger: AACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCCTTGGGTGGTCCGTaGTGGCCCCAGTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFALGGP*WPQSLS
Trigger: GCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGGGAAGCAGAGGCCTTaGGTGGTCCGTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFGKQRP*VVRAGP
Trigger: GGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCCC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCCACTGCTGGGGATGTaGACGCACTGGATGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFPLLGM*THWMPR
Trigger: GCGGGGCATCCAGTGCGTGCACATCCCCAGCAGTGG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTCGACCCGCTTGGCCTaGCAGGAGGATGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSTRLA*QEDAPT
Trigger: TGTGGGGGCATCCTCCTGGCAGGCCAAGCGGGTCGA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCACTGACGTGCACGACTaGGGCCGCTGTGCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFTDVHD*GRCARE
Trigger: TTCGCGGGCACAGCGGCCGCAGTCGTGCACGTCAGT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCATCGCCCGCTTGCCCTaGCCCAAGTGGCTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGIARLP*PKWLPA
Trigger: CGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGAT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTCCCTGGGCAAAGCATaGGCAGAGTGCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSLGKA*AECGGP
Trigger: GGGGCCTCCGCACTCTGCTCATGCTTTGCCCAGGGA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCAGTGACCCTGCCAACTaGCGTGCACGACTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSDPAN*RARLRP
Trigger: CGGCCGCAGTCGTGCACGTCAGTTGGCAGGGTCACT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGGGTGTGGGCAAGGCTaGCACACGCCATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGGCGQG*HTPCAQ
Trigger: CTGAGCGCATGGCGTGTGTCAGCCTTGCCCACACCC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCAAAGCGGCAGACGATaGAGGACGCGCCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGQSGRR*RTRLRH
Trigger: GTGCCGGAGGCGCGTCCTGCATCGTCTGCCGCTTTG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTGTGCACGCACTGGATaGCCCGCTCCAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFCARTG*PAPNRP
Trigger: GGGCCTGTTTGGAGCGGGGCATCCAGTGCGTGCACA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGGGGGTGCCGTGAGCTaGTCCGCTGCCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGGGAVS*SAASSE
Trigger: TTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCAGCTTGGGCTGCCTaGTTCCGGCTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFAAWAA*FRLLLS
Trigger: TGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGAGCTGGCCGCAGCATaGCGGGTCCCATTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGELAAA*RVPFCL
Trigger: CAGGCAGAATGGGACCCGCCATGCTGCGGCCAGCTC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTCCGGAGTCTGGGGTTaGGTGGGGGATGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSGVWG*VGDAEG
Trigger: CCCCTCAGCATCCCCCACCCAACCCCAGACTCCGGA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCCACCTTCCGGAGTCTaGGGTTGGGTGGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFPPSGV*GWVGDA
Trigger: AGCATCCCCCACCCAACCCCAGACTCCGGAAGGTGG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTTGGGGGTCATCGGTaGAAGGCCAGAGCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFFGGHR*KARAAP
Trigger: CGGCGCTGCTCTGGCCTTCCACCGATGACCCCCAAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCAGCAGAGGCCTTGGGTaGTCCGTGCTGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSRGLG*SVLAPV
Trigger: GACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGGGTGCTGTGGACAGTaGCCCTGCCAACTGACGTGC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGGCCGQ*PCQLTC
Trigger: GCACGTCAGTTGGCAGGGTCACTGTCCACAGCACCC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCAGCCTCACTAGGGGCTaGATCTCCACCCGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSLTRG*ISTRLG
Trigger: GCCAAGCCGGGTGGAGATGCAGCCCCTAGTGAGGCT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTCAGGCTTGGCAGCTTaGGCTGCCTGGTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGSGLAA*AAWFRL
Trigger: CAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGGGATGTGCACGCACTaGATGCCCCGCTCCAAACAG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFGMCTH*MPRSKQ
Trigger: CTGTTTGGAGCGGGGCATCCAGTGCGTGCACATCCC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCTGGAGTTCAGCCACTaGCCGCCACCTTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGLEFSH*PPPSGV
Trigger: GACTCCGGAAGGTGGCGGCCAGTGGCTGAACTCCAG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTTCCAGCCCAGAGAATaGCAGCGAGGAGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGFQPRE*QRGGWR
Trigger: CCGCCACCCTCCTCGCTGCCATTCTCTGGGCTGGAA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCAATGAGGGGCTGGCTTaGAGCATCTGGAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFNEGLA*SIWSDR
Trigger: GCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCAGGGACTCTCAGATGTaGGCAACGGAGGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFRDSQM*ATEAVR
Trigger: CCGAACAGCCTCCGTTGCCCACATCTGAGAGTCCCT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCAATCTTTCCACGCCCTaGCTCCGAGGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFNLSTP*LRGSSG
Trigger: GCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGAGGCAGCAGCAATTTaGTCCCGGGCTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFEAAAI*SRASSE
Trigger: CTCAGAGGAAGCCCGGGACCAAATTGCTGCTGCCTC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCAGCTTTGCCCACTGCTaGGGATGTGCACGCACTGGA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSFAHC*GCARTG
Trigger: TCCAGTGCGTGCACATCCCCAGCAGTGGGCAAAGCT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCAAACATCGACCCGCTTaGCCTGCCAGGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGKHRPA*PARRMP
Trigger: GGGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCATCTCCACCCGGCTTaGCTTCCTCCCGAGCTACTT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFHLHPA*LPPELL
Trigger: AAGTAGCTCGGGAGGAAGCCAAGCCGGGTGGAGATG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCTGGCTTGCAGCATCTaGAGTGACCGCGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFLACSI*SDREWF
Trigger: GAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTCTGCCTGACTTGCTaGTGTTTGACAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFFCLTC*CLTEAG
Trigger: CCCGGCCTCTGTCAAACATCAGCAAGTCAGGCAGAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCGTGAGCTGCTCCGCTaGCAGCTCAGAAACATCGAC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGRELLR*QLRNID
Trigger: GTCGATGTTTCTGAGCTGGCAGCGGAGCAGCTCACG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCGCCGCCTCCTTCCATaGAGAGAGCTGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGRRLLP*RELSEV
Trigger: GACTTCTGACAGCTCTCTCCATGGAAGGAGGCGGCG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCTGGAATCTCTTTCTTaGGCTTCTCCGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFLESLS*ASPQPQ
Trigger: CTGGGGCTGCGGAGAAGCCCAAGAAAGAGATTCCAG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCAGCCCCAACTTGTTTaGAACAGGGATCGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFQPQLV*NRDRPL
Trigger: AAGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGACAGGTTCTCACATTaGTGCCCAGGCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFDRFSH*CPGWSA
Trigger: TGCACTCCAGCCTGGGCACCAATGTGAGAACCTGTC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCAGCAAGGGGCTGTCTaGCAGGTAGTATGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGQQGAV*QVVCLP
Trigger: AGGGAGACATACTACCTGTCAGACAGCCCCTTGCTG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGTTCGGCTTAGAACTTaGGGAGTGGGGAATCCACGT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFVRLRT*GVGNPR
Trigger: ACGTGGATTCCCCACTCCTCAAGTTCTAAGCCGAAC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCTTCCTCTGAGTCGCTaGCTGACTTGCAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGLPLSR*LTCSMS
Trigger: GCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTTAGCTTTGCCCACTaGTGGGGATGTGCACGCACT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFFSFAH*WGCART
Trigger: AGTGCGTGCACATCCCCAGCAGTGGGCAAAGCTAAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGGTCGATCAGAGGCCTaGTTTCAGATCCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFGRSEA*FQILQP
Trigger: TGGCTGTAGGATCTGAAAGCAGGCCTCTGATCGACC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCAGCCACGTGTGCTTCTaGGGTATCGCAGAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSHVCF*GIAEVD
Trigger: ATCGACTTCTGCGATACCCCAGAAGCACACGTGGCT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGAAAAGTTAAGTGCCTaGGGCACACGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGEKLSA*GTREGG
Trigger: TCCTCCTTCCCGTGTGCCTCAGGCACTTAACTTTTC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCTGCCTGGTTCCGGCTaGTGCTCTCAATGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGLPGSG*CSQCVK
Trigger: CTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTGGTTCAGTTCTCATTaGAGAGTTCTTGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGWFSSH*RVLAGL
Trigger: GAGCCCCGCAAGAACTCTGCAATGAGAACTGAACCA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR GCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTGGAGAAAAGTTAAGTaGCTGAGGCACACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGWRKVK*LRHTGR
Trigger: CCTTCCCGTGTGCCTCAGGCACTTAACTTTTCTCCA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCACACATCCACCAGCCTaGAATCTGTCTTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFTHPPA*NLSFCC
Trigger: GCAACAGAAAGACAGATTCCAGGCTGGTGGATGTGT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCCCGAGCTACTTCTGTaGCAGTACTTTTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFPELLL*QYFWRK
Trigger: CTTTCTCCAAAAGTACTGCCACAGAAGTAGCTCGGG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTGGAGTGACCGCGAGTaGTTCCAGTTTGATATCTAC +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFWSDRE*FQFDIY
Trigger: GTAGATATCAAACTGGAACCACTCGCGGTCACTCCA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCATTTTGACTCCTGTATaGATCTTTCCACGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGILTPV*IFPRPG
Trigger: GCCAGGGCGTGGAAAGATTCATACAGGAGTCAAAAT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCCTGGAAGGACTAGCTaGAATCTCTTTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGPGRTS*NLFLGL
Trigger: AAGCCCAAGAAAGAGATTCCAGCTAGTCCTTCCAGG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGGATTCCTTCTCAGCTaGGATTTTTGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGGFLLS*DFCPGR
Trigger: CCTTCCAGGACAAAAATCCCAGCTGAGAAGGAATCC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTAGAACTTGAGGAGTaGGGAATCCACGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFLELEE*GIHVLL
Trigger: AAGGAGAACGTGGATTCCCCACTCCTCAAGTTCTAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCTGTAAAGCCAGTAAGTaGGCTTCTTTGTACACCTCC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGCKASK*ASLYTS
Trigger: GGAGGTGTACAAAGAAGCTCACTTACTGGCTTTACA...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCAATTGAGAAGATTCTaGCCAAGCGCAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGQLRRF*PSATGV
Trigger: AACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCCACCGGTGAAGGTTTaGCCACATTTTTATTCATGT +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFPPVKV*PHFYSC
Trigger: ACATGAATAAAAATGTGGCCAAACCTTCACCGGTGG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTCAAGGCAAAGGATTTaGTTCGGCTTAGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSRQRI*FGLELE
Trigger: CTCAAGTTCTAAGCCGAACCAAATCCTTTGCCTTGA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR TCA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCTAGTCTTATTCAATTaGGAAGATTCTGACCAAGCG +
Preference number: 4 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFLVLFN*EDSDQA
Trigger: CGCTTGGTCAGAATCTTCTCAATTGAATAAGACTAG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCAGAATCGCTTTCCTCTaGAGAAAAGTTAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGRIAFL*RKVKCL
Trigger: CAGGCACTTAACTTTTCTCCAGAGGAAAGCGATTCT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCACCCTCTCCAGCACTaGGAATATATTTATGCTTAT +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGHPLQH*EYIYAY
Trigger: ATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CCA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCATTTTTATTCATGTCTaGAGTGTTTGTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: ENSSFRVTEASHSSPENGIFIHV*SVCHEV
Trigger: GACCTCATGACAAACACTCCAGACATGAATAAAAAT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCGGCGGCCGGCACATaGACAGCACCCGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPAAGT*TAPGAG
Trigger: ACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCGGGAAGCAGAGGCCTaGGGTGGTCCGTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLREAEA*GGPCWP
Trigger: GGGCCAGCACGGACCACCCAAGGCCTCTGCTTCCCG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp TCGCCCGCTTGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACATTaGCAGCACCCGGGGCAGGTTTGTCAGGGAGAACATCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: SPACPGPSGFRRPAH*QHPGQVCQGEHPGG
Trigger: CCCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp GTGAGCTGCTCCGCTGCCAGCTCAGAAACATCGACCCGCTTGGCCTaGCAGGAGGATGCCCCCACAGGGCCTGCAGGCAGAGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: VSCSAASSETSTRLA*QEDAPTGPAGRAGR
Trigger: GCGGCCAGCTCTGCCTGCAGGCCCTGTGGGGGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTTCTGAGCTGGCAGCGGAGCAGCTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGCACCCGGGGCAGGTTaGTCAGGGAGAACATCCCGG +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLAPGAG*SGRTSR
Trigger: CCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp TGGGGGTCATCGGTGGAAGGCCAGAGCAGCGCCGGCTGGCGGGTGTaGGCAAGGCTGACACACGCCATGCGCTCAGCAGGCTTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: WGSSVEGQSSAGWRV*ARLTHAMRSAGFVV
Trigger: CACCACAAAGCCTGCTGAGCGCATGGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 90 bp GCATCGTTTTGGGGGTCATCGGTGGAAGGCCAGAGCAGCGCCGGCTaGCGGGTGTGGGCAAGGCTGACACACGCCATGCGCTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ASFWGSSVEGQSSAG*RVWARLTHAMRSAG
Trigger: GCCTGCTGAGCGCATGGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCAAAACGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGTGCCCGCGAAAGCTTaGGTGTTGAGCTGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLVPAKA*VLSCPG
Trigger: CCCCGGACAGCTCAACACCAAAGCTTTCGCGGGCAC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp TCAGGCGGGGCCTTGGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTaGCTCTCTGACTGTTGCCCACCTCCCTGTCCATACCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: SGGALVEGGSVWGGP*LSDCCPPPCPYPLT
Trigger: GGTGAGCGGGTATGGACAGGGAGGTGGGCAACAGTCAGAGAGGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCCCCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CCA 90 bp CCCAACTTGTTTGGAACAGGGATCGCCCGCTTGCCCTGGCCCAAGTaGCTTCCGGCGGCCGGCACATTGACAGCACCCGGGGCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PNLFGTGIARLPWPK*LPAAGTLTAPGAGL
Trigger: CAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAACAAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGCTGGAATCTCTTTCTaGGGCTTCTCCGCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLAGISF*GFSAAP
Trigger: TGGGGCTGCGGAGAAGCCCAAGAAAGAGATTCCAGC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGACTTCCTTGCGAGATaGCTGGTAGAGCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLDFLAR*LVEPGA
Trigger: AGCACCCGGCTCTACCAGCAATCTCGCAAGGAAGTC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGCGAAAGCTTTGGTGTaGAGCTGTCCGGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLAKALV*SCPGSH
Trigger: GTGACTCCCCGGACAGCTCAACACCAAAGCTTTCGC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCGAATCCACGTTCTCCTaGTCAGCCTCAGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLESTFS*SASGLS
Trigger: GCTGAGCCCTGAGGCTGACAAGGAGAACGTGGATTC...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp GGCCTTGGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTGCCTCTCTaGCTGTTGCCCACCTCCCTGTCCATACCCGCTCACCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GLGGRRLCMGWAVPL*LLPTSLSIPAHQQP
Trigger: TGGCTGCTGGTGAGCGGGTATGGACAGGGAGGTGGGCAACAGTCAGAGAGGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS GCA 90 bp GGCTTCCCGAGCAGCCTCCAGGAATCTCAGCTAACAGAACCCAGCTaGGCCCGTTCTGCCCACCTCACTAGGGGCTGCATCTCCACCCGG +
Preference number: 5 (lower is better)
Translates to: GFPSSLQESQLTEPS*ARSAHLTRGCISTR
Trigger: CCGGGTGGAGATGCAGCCCCTAGTGAGGTGGGCAGAACGGGCGCAGCTGGGTTCTGTTAGCTGAGATTCCTGGAGGCTGCTCGGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479645.1
CDS CCA 90 bp TTCTTCAGCCCCAACTTGTTTGGAACAGGGATCGCCCGCTTGCCCTaGCCCAAGTGGCTTCCGGCGGCCGGCACATTGACAGCACCCGGG +
Preference number: 5 (lower is better)
Translates to: FFSPNLFGTGIARLP*PKWLPAAGTLTAPG
Trigger: CCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp GGAAGTCCTGACTGCCTCCCTTTGGGTTGCTTGGCACGGAGGCACTaGCCCCAGGATGAAGCATGGCAGGGAACTCCGCCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GSPDCLPLGCLARRH*PQDEAWQGTPPATA
Trigger: GGCTGTGGCTGGCGGAGTTCCCTGCCATGCTTCATCCTGGGGCCAGTGCCTCCGTGCCAAGCAACCCAAAGGGAGGCAGTCAGGACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCTCATTGCAGAGTTCTaGCGGGGCTCAGAGGAACGT +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLIAEF*RGSEER
Trigger: ACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp GGGCTTCCTCTGAGTCGCTGCCTGACTTGCAGCATGAGCAGTGCATaGTTCCCTGGGCAAAGCATGAGCAGAGTGCGGAGGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: GLPLSRCLTCSMSSA*FPGQSMSRVRRPRR
Trigger: GCGCCGGGGCCTCCGCACTCTGCTCATGCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp CAGGTGGGCTGGCGGTTTGGAAAGCCAAGGAATCAGGCGGGGCCTTaGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTGCCTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: QVGWRFGKPRNQAGP*WKEALYGVGRASLT
Trigger: AGTCAGAGAGGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTTCTTCAGCCCCAACTaGTTTGGAACAGGGATCGCC +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLFFSPN*FGTGIA
Trigger: GGCGATCCCTGTTCCAAACAAGTTGGGGCTGAAGAA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCCCCATTCTGCCTGACTaGCTGATGTTTGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLPILPD*LMFDRG
Trigger: GCCTCTGTCAAACATCAGCAAGTCAGGCAGAATGGG...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp TCCCGGGCTTCCTCTGAGTCGCTGCCTGACTTGCAGCATGAGCAGTaGATGATTCCCTGGGCAAAGCATGAGCAGAGTGCGGAGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SRASSESLPDLQHEQ*MIPWAKHEQSAEAP
Trigger: CGGGGCCTCCGCACTCTGCTCATGCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAGCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GGAAGCAGAGGCCTTGGGTGGTCCGTGCTGGCCCCAGTCCCTCAGCCCACCCTCTTGGTTCAGTTCTCATaGCAGAGTTCTTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GSRGLGWSVLAPVPQPTLLVQFS*QSSCGA
Trigger: AGCCCCGCAAGAACTCTGCAATGAGAACTGAACCAA...GAGGGTGGGCTGAGGGACTGGGGCCAGCACGGACCACCCAAGGCCTCTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp AGTCAAATGCAGGGCTTTCTCCCCTGGAGGCCTGGAAGTCCTGACTaGCTCCCTTTGGGTTGCTTGGCACGGAGGCACTGGCCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SQMQGFLPWRPGSPD*LPLGCLARRHWPQD
Trigger: ATCCTGGGGCCAGTGCCTCCGTGCCAAGCAACCCAAAGGGAGGCAGTCAGGACTTCCAGGCCTCCAGGGGAGAAAGCCCTGCATTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CCA 90 bp AGGAGTGGGGAATCCACGTTCTCCTTGTCAGCCTCAGGGCTCAGCTaGATCAGAGGGGAGCTCAGGTCTATGAGCTGTCCCACCACCGGT +
Preference number: 5 (lower is better)
Translates to: RSGESTFSLSASGLS*IRGELRSMSCPTTG
Trigger: ACCGGTGGTGGGACAGCTCATAGACCTGAGCTCCCCTCTGATCCAGCTGAGCCCTGAGGCTGACAAGGAGAACGTGGATTCCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CCA 90 bp AATCTTTCCACGCCCTGGCTCCGAGGGTCTTCAGGCTTGGCAGCTTaGGCTGCCTGGTTCCGGCTGCTGCTCTCAATGTGTAAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: NLSTPWLRGSSGLAA*AAWFRLLLSMCKAS
Trigger: ACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp TGGGAGAATGTGAGCTTTGCTCATGTTCCAGGTGGGCTGGCGGTTTaGAAAGCCAAGGAATCAGGCGGGGCCTTGGTGGAAGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WENVSFAHVPGGLAV*KAKESGGALVEGGS
Trigger: AGAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS TCA 90 bp GCTGCCTGGTTCCGGCTGCTGCTCTCAATGTGTAAAGCCAGTAAGTaGGCTTCTTTGTACACCTCCACGAACTTCTCCCCGGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: AAWFRLLLSMCKASK*ASLYTSTNFSPARG
Trigger: CCCTCTGGCCGGGGAGAAGTTCGTGGAGGTGTACAAAGAAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp GCAGAGCTGGCCGCAGCATGGCGGGTCCCATTCTGCCTGACTTGCTaGTGTTTGACAGAGGCCGGGAGCTATTTGCAGGAATACTTGCAA +
Preference number: 5 (lower is better)
Translates to: AELAAAWRVPFCLTC*CLTEAGSYLQEYLQ
Trigger: TTGCAAGTATTCCTGCAAATAGCTCCCGGCCTCTGTCAAACATCAGCAAGTCAGGCAGAATGGGACCCGCCATGCTGCGGCCAGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 90 bp TTGATCCCTGACCCTTGCCTTAGTCAAATGCAGGGCTTTCTCCCCTaGAGGCCTGGAAGTCCTGACTGCCTCCCTTTGGGTTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LIPDPCLSQMQGFLP*RPGSPDCLPLGCLA
Trigger: TGCCAAGCAACCCAAAGGGAGGCAGTCAGGACTTCCAGGCCTCCAGGGGAGAAAGCCCTGCATTTGACTAAGGCAAGGGTCAGGGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CCA 90 bp CTGGCAACCATCTTGGGAGAATGTGAGCTTTGCTCATGTTCCAGGTaGGCTGGCGGTTTGGAAAGCCAAGGAATCAGGCGGGGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LATILGECELCSCSR*AGGLESQGIRRGLG
Trigger: ACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCAAGATGGTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CCA 90 bp GTCGATCAGAGGCCTGCTTTCAGATCCTACAGCCACGTGTGCTTCTaGGGTATCGCAGAAGTCGATGAGAGGAAGGTCAATGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VDQRPAFRSYSHVCF*GIAEVDERKVNEGL
Trigger: CAGCCCCTCATTGACCTTCCTCTCATCGACTTCTGCGATACCCCAGAAGCACACGTGGCTGTAGGATCTGAAAGCAGGCCTCTGATCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS GCA 90 bp GAGGGTCTTCAGGCTTGGCAGCTTGGGCTGCCTGGTTCCGGCTGCTaGTCTCAATGTGTAAAGCCAGTAAGTGAGCTTCTTTGTACACCT +
Preference number: 5 (lower is better)
Translates to: EGLQAWQLGLPGSGC*SQCVKPVSELLCTP
Trigger: AGGTGTACAAAGAAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp TCCGAGGGTCTTCAGGCTTGGCAGCTTGGGCTGCCTGGTTCCGGCTaGTGCTCTCAATGTGTAAAGCCAGTAAGTGAGCTTCTTTGTACA +
Preference number: 5 (lower is better)
Translates to: SEGLQAWQLGLPGSG*CSQCVKPVSELLCT
Trigger: TGTACAAAGAAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp ACATTGACAGCACCCGGGGCAGGTTTGTCAGGGAGAACATCCCGGTaGGATTCCTTCTCAGCTGGGATTTTTGTCCTGGAAGGACTAGCT +
Preference number: 5 (lower is better)
Translates to: TLTAPGAGLSGRTSR*DSFSAGIFVLEGLA
Trigger: AGCTAGTCCTTCCAGGACAAAAATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp AAGGTCAATGAGGGGCTGGCTTGCAGCATCTGGAGTGACCGCGAGTaGTTCCAGTTTGATATCTACAAGAAGAGCCTCACTAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KVNEGLACSIWSDRE*FQFDIYKKSLTRGC
Trigger: GCAGCCCCTAGTGAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp TCTGGGGTATCGCAGAAGTCGATGAGAGGAAGGTCAATGAGGGGCTaGCTTGCAGCATCTGGAGTGACCGCGAGTGGTTCCAGTTTGATA +
Preference number: 5 (lower is better)
Translates to: SGVSQKSMRGRSMRG*LAASGVTASGSSLI
Trigger: TATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTCTGCGATACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS GCA 90 bp GGTATCGCAGAAGTCGATGAGAGGAAGGTCAATGAGGGGCTGGCTTaGAGCATCTGGAGTGACCGCGAGTGGTTCCAGTTTGATATCTAC +
Preference number: 5 (lower is better)
Translates to: GIAEVDERKVNEGLA*SIWSDREWFQFDIY
Trigger: GTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTCTGCGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS GCA 90 bp CATGAGGTCGATCAGAGGCCTGCTTTCAGATCCTACAGCCACGTGTaGTTCTGGGGTATCGCAGAAGTCGATGAGAGGAAGGTCAATGAG +
Preference number: 5 (lower is better)
Translates to: HEVDQRPAFRSYSHV*FWGIAEVDERKVNE
Trigger: CTCATTGACCTTCCTCTCATCGACTTCTGCGATACCCCAGAAGCACACGTGGCTGTAGGATCTGAAAGCAGGCCTCTGATCGACCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS GCA 90 bp ACCAATTTATTACCACCTTCGTGTCTTACCTCATTGCAGAGTTCTTaGGGGGCTCAGAGGAACGTCTCCGAGCTGGCACACACAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TNLLPPSCLTSLQSS*GAQRNVSELAHTGE
Trigger: CTCCCCTGTGTGTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAATAAATTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTCAGGCTTGGCAGCTaGGGCTGCCTGGTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFFRLGS*GCLVPA
Trigger: AGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCCGAGGGTCTTCAGGCTaGGCAGCTTGGGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGRGSSG*AAWAAW
Trigger: CCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCG...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCACAGGGATCGCCCGCTaGCCCTGGCCCAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGTGIAR*PWPKWL
Trigger: AAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGT...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGAAACATCGACCCGCTaGGCCTGCCAGGAGGATGCC +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFETSTR*ACQEDA
Trigger: GGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTTC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCCCTGGGCATCGTTTaGGGGGTCATCGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFALGIV*GVIGGR
Trigger: CCTTCCACCGATGACCCCCAAAACGATGCCCAGGGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp AAGAGCAGAGTCCAGCATCTTTCTGGCAACCATCTTGGGAGAATGTaGGCTTTGCTCATGTTCCAGGTGGGCTGGCGGTTTGGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KSRVQHLSGNHLGRM*ALLMFQVGWRFGKP
Trigger: TGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCAAGATGGTTGCCAGAAAGATGCTGGACTCTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS GCA 90 bp GAGTCCAGCATCTTTCTGGCAACCATCTTGGGAGAATGTGAGCTTTaGTCATGTTCCAGGTGGGCTGGCGGTTTGGAAAGCCAAGGAATC +
Preference number: 5 (lower is better)
Translates to: ESSIFLATILGECEL*SCSRWAGGLESQGI
Trigger: GATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCAAGATGGTTGCCAGAAAGATGCTGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CCA 90 bp GGCAGGTTTGTCAGGGAGAACATCCCGGTGGGATTCCTTCTCAGCTaGGATTTTTGTCCTGGAAGGACTAGCTGGAATCTCTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GRFVRENIPVGFLLS*DFCPGRTSWNLFLG
Trigger: CCCAAGAAAGAGATTCCAGCTAGTCCTTCCAGGACAAAAATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGACAAACCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp GAAGTCGATGAGAGGAAGGTCAATGAGGGGCTGGCTTGCAGCATCTaGAGTGACCGCGAGTGGTTCCAGTTTGATATCTACAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: EVDERKVNEGLACSI*SDREWFQFDIYKKS
Trigger: GCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGCATCTCCACCCGGCTaGGCTTCCTCCCGAGCTACT +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGASPPG*ASSRAT
Trigger: AGTAGCTCGGGAGGAAGCCAAGCCGGGTGGAGATGC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGCAGCCTGCATCTCCTaGAGCTCAGGCCATCCTCCC +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGAACIS*SSGHPP
Trigger: GGGAGGATGGCCTGAGCTCAAGGAGATGCAGGCTGC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp ATCTCGCCGTCTGATACTTCTAGTCTTATTCAATTGAGAAGATTCTaGCCAAGCGCAACTGGAGTTCAGCCACTGGCCGCCACCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ISPSDTSSLIQLRRF*PSATGVQPLAATFR
Trigger: CCGGAAGGTGGCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGAATAAGACTAGAAGTATCAGACGGCGAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 90 bp GTTCTTTCAAGGCAAAGGATTTGGTTCGGCTTAGAACTTGAGGAGTaGGGAATCCACGTTCTCCTTGTCAGCCTCAGGGCTCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: VLSRQRIWFGLELEE*GIHVLLVSLRAQLD
Trigger: ATCCAGCTGAGCCCTGAGGCTGACAAGGAGAACGTGGATTCCCCACTCCTCAAGTTCTAAGCCGAACCAAATCCTTTGCCTTGAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 90 bp AAGGTCAATGAGGGGCTGGCTTGCAGCATCTGGAGTGACCGCGAGTaGTTCCAGTTTGATATCTACAAGAAGAGCCTGGGTACAAAACCA +
Preference number: 5 (lower is better)
Translates to: KVNEGLACSIWSDRE*FQFDIYKKSLGTKP
Trigger: TGGTTTTGTACCCAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTCAGCCCCAACTTGTTaGGAACAGGGATCGCCCGCT +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSAPTC*EQGSPA
Trigger: AGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTGA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 90 bp AGGAATTTGAGACCAATTTATTACCACCTTCGTGTCTTACCTCATTaGAGAGTTCTTGCGGGGCTCAGAGGAACGTCTCCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RNLRPIYYHLRVLPH*RVLAGLRGTSPSWH
Trigger: GTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAATAAATTGGTCTCAAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGAGTCGCTGCCTGACTaGCAGCATGAGCAGTGCATG +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGESLPD*QHEQCM
Trigger: CATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp GTGAAGGTTTGGCCACATTTTTATTCATGTCTGGAGTGTTTGTCATaGGGTCGATCAGAGGCCTGCTTTCAGATCCTACAGCCACGTGTG +
Preference number: 5 (lower is better)
Translates to: VKVWPHFYSCLECLS*GRSEACFQILQPRV
Trigger: CACACGTGGCTGTAGGATCTGAAAGCAGGCCTCTGATCGACCTCATGACAAACACTCCAGACATGAATAAAAATGTGGCCAAACCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTCACTTGATTTAGCTTaGCCCACTGCTGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFSLDLA*PTAGDV
Trigger: CACATCCCCAGCAGTGGGCAAAGCTAAATCAAGTGA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 90 bp TTTAGACAGGAATCTCGCCGTCTGATACTTCTAGTCTTATTCAATTaGGAAGATTCTGACCAAGCGCAACTGGAGTTCAGCCACTGGCCG +
Preference number: 5 (lower is better)
Translates to: FRQESRRLILLVLFN*EDSDQAQLEFSHWP
Trigger: CGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGAATAAGACTAGAAGTATCAGACGGCGAGATTCCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGCGAGTGGTTCCAGTTaGATATCTACAAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFASGSS*ISTRRA
Trigger: GGCTCTTCTTGTAGATATCAAACTGGAACCACTCGC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGAGGCCGGGAGCTATTaGCAGGAATACTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGEAGSY*QEYLQI
Trigger: AATTTGCAAGTATTCCTGCAAATAGCTCCCGGCCTC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCTTCTGTTGCTCTCCCTaGTTGGTTCAGTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFFCCSP*LVQFSL
Trigger: CAATGAGAACTGAACCAACAAGGGAGAGCAACAGAA...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCGAATCTGTCTTTCTGTaGCTCTCCCTTGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFESVFL*LSLVGS
Trigger: TGAACCAACAAGGGAGAGCAACAGAAAGACAGATTC...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCACCACCGGTGAAGGTTaGGCCACATTTTTATTCATG +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFTTGEG*ATFLFM
Trigger: CATGAATAAAAATGTGGCCAAACCTTCACCGGTGGT...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp CAGTCCCTCAGCCCACCCTCTCCAGCACTGGGAATATATTTATGCTTATTTTTCCTTCATCATCTTCATTaGCACTCGAAGAAGACAATG +
Preference number: 5 (lower is better)
Translates to: QSLSPPSPALGIYLCLFFLHHLH*HSKKTM
Trigger: CATTGTCTTCTTCGAGTGCAAATGAAGATGATGAAG...GAAAAATAAGCATAAATATATTCCCAGTGCTGGAGAGGGTGGGCTGAGGGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS-3UTR CAA 90 bp GAAAATTCTTCATTTAGAGTGACTGAGGCTTCACATTCCAGCCCAGAGAATGGCGGCATAACCTTTGTCTaGGAATTTAGACAGGAATCT +
Preference number: 5 (lower is better)
Translates to: ENSSFRVTEASHSSPENGGITFV*EFRQES
Trigger: AGATTCCTGTCTAAATTCCAAGACAAAGGTTATGCC...GCCATTCTCTGGGCTGGAATGTGAAGCCTCAGTCACTCTAAATGAAGAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GCCCACGGCCCTGGGCATCGTTTTGGGGGTCATCGGTaGAAGGCCAGAGCAGCGCCGGCTGGCGGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AHGPGHRFGGHR*KARAAPAGGCG
Trigger: CCCACACCCGCCAGCCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCAAAACGATGCCCAGGGCCGTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 72 bp TGGGGGTCATCGGTGGAAGGCCAGAGCAGCGCCGGCTaGCGGGTGTGGGCAAGGCTGACACACGCCATGCGC +
Preference number: 6 (lower is better)
Translates to: WGSSVEGQSSAG*RVWARLTHAMR
Trigger: GCGCATGGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 90 bp CGAGCTGGCACACACAGGGGAGAGCCCACGGCCCTGGGCATCGTTTaGGGGGTCATCGGTGGAAGGCCAGAGCAGCGCCGGCTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: RAGTHRGEPTALGIV*GVIGGRPEQRRLAG
Trigger: ACCCGCCAGCCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCAAAACGATGCCCAGGGCCGTGGGCTCTCCCCTGTGTGTGCCAGCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS TCA 72 bp GCCAGAGCAGCGCCGGCTGGCGGGTGTGGGCAAGGCTaGCACACGCCATGCGCTCAGCAGGCTTTGTGGTGC +
Preference number: 6 (lower is better)
Translates to: ARAAPAGGCGQG*HTPCAQQALWC
Trigger: GCACCACAAAGCCTGCTGAGCGCATGGCGTGTGTCAGCCTTGCCCACACCCGCCAGCCGGCGCTGCTCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 90 bp ATCGCCCGCTTGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACATaGACAGCACCCGGGGCAGGTTTGTCAGGGAGAACATCCCGGTGG +
Preference number: 6 (lower is better)
Translates to: IARLPWPKWLPAAGT*TAPGAGLSGRTSRW
Trigger: CCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 90 bp GGTGCCGTGAGCTGCTCCGCTGCCAGCTCAGAAACATCGACCCGCTaGGCCTGCCAGGAGGATGCCCCCACAGGGCCTGCAGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: GAVSCSAASSETSTR*ACQEDAPTGPAGRA
Trigger: AGCTCTGCCTGCAGGCCCTGTGGGGGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 72 bp TTTGGAACAGGGATCGCCCGCTTGCCCTGGCCCAAGTaGCTTCCGGCGGCCGGCACATTGACAGCACCCGGG +
Preference number: 6 (lower is better)
Translates to: FGTGIARLPWPK*LPAAGTLTAPG
Trigger: CCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GCTGCTCCGCTGCCAGCTCAGAAACATCGACCCGCTTaGCCTGCCAGGAGGATGCCCCCACAGGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAPLPAQKHRPA*PARRMPPQGLQ
Trigger: CTGCAGGCCCTGTGGGGGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTTCTGAGCTGGCAGCGGAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 72 bp ACACACAGGGGAGAGCCCACGGCCCTGGGCATCGTTTaGGGGGTCATCGGTGGAAGGCCAGAGCAGCGCCGG +
Preference number: 6 (lower is better)
Translates to: THRGEPTALGIV*GVIGGRPEQRR
Trigger: CCGGCGCTGCTCTGGCCTTCCACCGATGACCCCCAAAACGATGCCCAGGGCCGTGGGCTCTCCCCTGTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS GCA 72 bp TCCGCTGCCAGCTCAGAAACATCGACCCGCTTGGCCTaGCAGGAGGATGCCCCCACAGGGCCTGCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SAASSETSTRLA*QEDAPTGPAGR
Trigger: TCTGCCTGCAGGCCCTGTGGGGGCATCCTCCTGGCAGGCCAAGCGGGTCGATGTTTCTGAGCTGGCAGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS TCA 72 bp TGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACATTaGCAGCACCCGGGGCAGGTTTGTCAGGGAGAACAT +
Preference number: 6 (lower is better)
Translates to: CPGPSGFRRPAH*QHPGQVCQGEH
Trigger: ATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp TCAGCCCCAACTTGTTTGGAACAGGGATCGCCCGCTTaGCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACAT +
Preference number: 6 (lower is better)
Translates to: SAPTCLEQGSPA*PGPSGFRRPAH
Trigger: ATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp TCCCCTGGAGGCCTGGAAGTCCTGACTGCCTCCCTTTaGGTTGCTTGGCACGGAGGCACTGGCCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: SPGGLEVLTASL*VAWHGGTGPRM
Trigger: CATCCTGGGGCCAGTGCCTCCGTGCCAAGCAACCCAAAGGGAGGCAGTCAGGACTTCCAGGCCTCCAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CAA 72 bp CACGCCCTGGCTCCGAGGGTCTTCAGGCTTGGCAGCTaGGGCTGCCTGGTTCCGGCTGCTGCTCTCAATGTG +
Preference number: 6 (lower is better)
Translates to: HALAPRVFRLGS*GCLVPAAALNV
Trigger: CACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp TTGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACATaGACAGCACCCGGGGCAGGTTTGTCAGGGAGAACA +
Preference number: 6 (lower is better)
Translates to: LPWPKWLPAAGT*TAPGAGLSGRT
Trigger: TGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp TTCAGCCCCAACTTGTTTGGAACAGGGATCGCCCGCTaGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACA +
Preference number: 6 (lower is better)
Translates to: FSPNLFGTGIAR*PWPKWLPAAGT
Trigger: TGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp CTCCCCTGGAGGCCTGGAAGTCCTGACTGCCTCCCTTaGGGTTGCTTGGCACGGAGGCACTGGCCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LPWRPGSPDCLP*GCLARRHWPQD
Trigger: ATCCTGGGGCCAGTGCCTCCGTGCCAAGCAACCCAAAGGGAGGCAGTCAGGACTTCCAGGCCTCCAGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CAA 90 bp CCAGGTGGGCTGGCGGTTTGGAAAGCCAAGGAATCAGGCGGGGCCTaGGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTGCCTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: PGGLAVWKAKESGGA*VEGGSVWGGPCLSD
Trigger: GTCAGAGAGGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS GCA 72 bp AGCTTTGCCCACTGCTGGGGATGTGCACGCACTGGATaGCCCGCTCCAAACAGGCCCCGAGGAGGACTTCCT +
Preference number: 6 (lower is better)
Translates to: SFAHCWGCARTG*PAPNRPRGGLP
Trigger: AGGAAGTCCTCCTCGGGGCCTGTTTGGAGCGGGGCATCCAGTGCGTGCACATCCCCAGCAGTGGGCAAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp ACGCCCTGGCTCCGAGGGTCTTCAGGCTTGGCAGCTTaGGCTGCCTGGTTCCGGCTGCTGCTCTCAATGTGT +
Preference number: 6 (lower is better)
Translates to: TPWLRGSSGLAA*AAWFRLLLSMC
Trigger: ACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp ATCTTTCCACGCCCTGGCTCCGAGGGTCTTCAGGCTTaGCAGCTTGGGCTGCCTGGTTCCGGCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: IFPRPGSEGLQA*QLGLPGSGCCS
Trigger: AGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp ATGAAGCATGGCAGGGAACTCCGCCAGCCACAGCCCTaGGTTCCACGGGCTTCCCGAGCAGCCTCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: MKHGRELRQPQP*VPRASRAASRN
Trigger: ATTCCTGGAGGCTGCTCGGGAAGCCCGTGGAACCCAGGGCTGTGGCTGGCGGAGTTCCCTGCCATGCTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CCA 72 bp GACTGCCTCCCTTTGGGTTGCTTGGCACGGAGGCACTaGCCCCAGGATGAAGCATGGCAGGGAACTCCGCCA +
Preference number: 6 (lower is better)
Translates to: DCLPLGCLARRH*PQDEAWQGTPP
Trigger: TGGCGGAGTTCCCTGCCATGCTTCATCCTGGGGCCAGTGCCTCCGTGCCAAGCAACCCAAAGGGAGGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CCA 72 bp TGGCGGTTTGGAAAGCCAAGGAATCAGGCGGGGCCTTaGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: WRFGKPRNQAGP*WKEALYGVGRA
Trigger: GGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CAA 72 bp AATCTTTCCACGCCCTGGCTCCGAGGGTCTTCAGGCTaGGCAGCTTGGGCTGCCTGGTTCCGGCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: NLSTPWLRGSSG*AAWAAWFRLLL
Trigger: GAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp CCGGCGGCCGGCACATTGACAGCACCCGGGGCAGGTTaGTCAGGGAGAACATCCCGGTGGGATTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PAAGTLTAPGAG*SGRTSRWDSFS
Trigger: TGAGAAGGAATCCCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp CTGGCGGTTTGGAAAGCCAAGGAATCAGGCGGGGCCTaGGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: LAVWKAKESGGA*VEGGSVWGGPC
Trigger: GCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CAA 90 bp AGGGTCTTCTTCAGCCCCAACTTGTTTGGAACAGGGATCGCCCGCTaGCCCTGGCCCAAGTGGCTTCCGGCGGCCGGCACATTGACAGCA +
Preference number: 6 (lower is better)
Translates to: RVFFSPNLFGTGIAR*PWPKWLPAAGTLTA
Trigger: TGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGGGCAAGCGGGCGATCCCTGTTCCAAACAAGTTGGGGCTGAAGAAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp CTGTGGACAGTGACCCTGCCAACTGACGTGCACGACTaGGGCCGCTGTGCCCGCGAAAGCTTTGGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: LWTVTLPTDVHD*GRCARESFGVE
Trigger: CTCAACACCAAAGCTTTCGCGGGCACAGCGGCCGCAGTCGTGCACGTCAGTTGGCAGGGTCACTGTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS GCA 72 bp GCCTTGGTGGAAGGAGGCTCTGTATGGGGTGGGCCGTaGCTCTCTGACTGTTGCCCACCTCCCTGTCCATAC +
Preference number: 6 (lower is better)
Translates to: ALVEGGSVWGGP*LSDCCPPPCPY
Trigger: GTATGGACAGGGAGGTGGGCAACAGTCAGAGAGGCACGGCCCACCCCATACAGAGCCTCCTTCCACCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CCA 72 bp AGGCTGAAGGCTCATCGCGGCCGCCGCCTCCTTCCATaGAGAGAGCTGTCAGAAGTCACCAAAGCGGCAGAC +
Preference number: 6 (lower is better)
Translates to: RLKAHRGRRLLP*RELSEVTKAAD
Trigger: GTCTGCCGCTTTGGTGACTTCTGACAGCTCTCTCCATGGAAGGAGGCGGCGGCCGCGATGAGCCTTCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp CTGCCTGACTTGCAGCATGAGCAGTGCATGATTCCCTaGGCAAAGCATGAGCAGAGTGCGGAGGCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: LPDLQHEQCMIP*AKHEQSAEAPA
Trigger: CGCCGGGGCCTCCGCACTCTGCTCATGCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GAAGATTCTGACCAAGCGCAACTGGAGTTCAGCCACTaGCCGCCACCTTCCGGAGTCTGGGGTTGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: EDSDQAQLEFSH*PPPSGVWGWVG
Trigger: CCCCACCCAACCCCAGACTCCGGAAGGTGGCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 90 bp AAGTGGCTTCCGGCGGCCGGCACATTGACAGCACCCGGGGCAGGTTaGTCAGGGAGAACATCCCGGTGGGATTCCTTCTCAGCTGGGATT +
Preference number: 6 (lower is better)
Translates to: KWLPAAGTLTAPGAG*SGRTSRWDSFSAGI
Trigger: AATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGCTGTCAATGTGCCGGCCGCCGGAAGCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp GAGAGAGCTGTCAGAAGTCACCAAAGCGGCAGACGATaGAGGACGCGCCTCCGGCACGGATTTAAACGCGGC +
Preference number: 6 (lower is better)
Translates to: ERAVRSHQSGRR*RTRLRHGFKRG
Trigger: GCCGCGTTTAAATCCGTGCCGGAGGCGCGTCCTGCATCGTCTGCCGCTTTGGTGACTTCTGACAGCTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp CTCCGAGGGTCTTCAGGCTTGGCAGCTTGGGCTGCCTaGTTCCGGCTGCTGCTCTCAATGTGTAAAGCCAGT +
Preference number: 6 (lower is better)
Translates to: LRGSSGLAAWAA*FRLLLSMCKAS
Trigger: ACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp GCTGGCCGCAGCATGGCGGGTCCCATTCTGCCTGACTaGCTGATGTTTGACAGAGGCCGGGAGCTATTTGCA +
Preference number: 6 (lower is better)
Translates to: AGRSMAGPILPD*LMFDRGRELFA
Trigger: TGCAAATAGCTCCCGGCCTCTGTCAAACATCAGCAAGTCAGGCAGAATGGGACCCGCCATGCTGCGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 90 bp TCCTGTATGAATCTTTCCACGCCCTGGCTCCGAGGGTCTTCAGGCTaGGCAGCTTGGGCTGCCTGGTTCCGGCTGCTGCTCTCAATGTGT +
Preference number: 6 (lower is better)
Translates to: SCMNLSTPWLRGSSG*AAWAAWFRLLLSMC
Trigger: ACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATTCATACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 90 bp GCAGCAGCAATTTGGTCCCGGGCTTCCTCTGAGTCGCTGCCTGACTaGCAGCATGAGCAGTGCATGATTCCCTGGGCAAAGCATGAGCAG +
Preference number: 6 (lower is better)
Translates to: AAAIWSRASSESLPD*QHEQCMIPWAKHEQ
Trigger: CTGCTCATGCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAGCCCGGGACCAAATTGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 90 bp GCAGGCAGAGCTGGCCGCAGCATGGCGGGTCCCATTCTGCCTGACTaGCTGATGTTTGACAGAGGCCGGGAGCTATTTGCAGGAATACTT +
Preference number: 6 (lower is better)
Translates to: AGRAGRSMAGPILPD*LMFDRGRELFAGIL
Trigger: AAGTATTCCTGCAAATAGCTCCCGGCCTCTGTCAAACATCAGCAAGTCAGGCAGAATGGGACCCGCCATGCTGCGGCCAGCTCTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 90 bp TTGGGAGAATGTGAGCTTTGCTCATGTTCCAGGTGGGCTGGCGGTTaGGAAAGCCAAGGAATCAGGCGGGGCCTTGGTGGAAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LGECELCSCSRWAGG*ESQGIRRGLGGRRL
Trigger: GAGCCTCCTTCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS TCA 72 bp GCCGCAGCATGGCGGGTCCCATTCTGCCTGACTTGCTaGTGTTTGACAGAGGCCGGGAGCTATTTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: AAAWRVPFCLTC*CLTEAGSYLQE
Trigger: TTCCTGCAAATAGCTCCCGGCCTCTGTCAAACATCAGCAAGTCAGGCAGAATGGGACCCGCCATGCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS TCA 72 bp CGACTGCGGCCGCTGTGCCCGCGAAAGCTTTGGTGTTaGGCTGTCCGGGGAGTCACCAATAGAAAACTTAGG +
Preference number: 6 (lower is better)
Translates to: RLRPLCPRKLWC*AVRGVTNRKLR
Trigger: CCTAAGTTTTCTATTGGTGACTCCCCGGACAGCTCAACACCAAAGCTTTCGCGGGCACAGCGGCCGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 72 bp CGGCCAGAGGGCTCCAGGCAAAGGGACTCTCAGATGTaGGCAACGGAGGCTGTTCGGGAACCGGATTATTTA +
Preference number: 6 (lower is better)
Translates to: RPEGSRQRDSQM*ATEAVREPDYL
Trigger: TAAATAATCCGGTTCCCGAACAGCCTCCGTTGCCCACATCTGAGAGTCCCTTTGCCTGGAGCCCTCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp TCGCAGAAGTCGATGAGAGGAAGGTCAATGAGGGGCTaGCTTGCAGCATCTGGAGTGACCGCGAGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: SQKSMRGRSMRG*LAASGVTASGS
Trigger: GGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CCA 72 bp GACCCTTGCCTTAGTCAAATGCAGGGCTTTCTCCCCTaGAGGCCTGGAAGTCCTGACTGCCTCCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: DPCLSQMQGFLP*RPGSPDCLPLG
Trigger: ACCCAAAGGGAGGCAGTCAGGACTTCCAGGCCTCCAGGGGAGAAAGCCCTGCATTTGACTAAGGCAAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479645.1
ENST00000491863.1
CDS CAA 72 bp TGTGAGCTTTGCTCATGTTCCAGGTGGGCTGGCGGTTaGGAAAGCCAAGGAATCAGGCGGGGCCTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: CELCSCSRWAGG*ESQGIRRGLGG
Trigger: TCCACCAAGGCCCCGCCTGATTCCTTGGCTTTCCAAACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS GCA 72 bp TCCTCTGAGTCGCTGCCTGACTTGCAGCATGAGCAGTaGATGATTCCCTGGGCAAAGCATGAGCAGAGTGCG +
Preference number: 6 (lower is better)
Translates to: SSESLPDLQHEQ*MIPWAKHEQSA
Trigger: CGCACTCTGCTCATGCTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GCACCCGGGGCAGGTTTGTCAGGGAGAACATCCCGGTaGGATTCCTTCTCAGCTGGGATTTTTGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: APGAGLSGRTSR*DSFSAGIFVLE
Trigger: TTCCAGGACAAAAATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGACAAACCTGCCCCGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp ATTTGGTCCCGGGCTTCCTCTGAGTCGCTGCCTGACTaGCAGCATGAGCAGTGCATGATTCCCTGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: IWSRASSESLPD*QHEQCMIPWAK
Trigger: CTTTGCCCAGGGAATCATGCACTGCTCATGCTGCAAGTCAGGCAGCGACTCAGAGGAAGCCCGGGACCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp CTCCAAACAGGCCCCGAGGAGGACTTCCTTGCGAGATaGCTGGTAGAGCCGGGTGCTTTTAACAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LQTGPEEDFLAR*LVEPGAFNRVF
Trigger: GAAGACCCTGTTAAAAGCACCCGGCTCTACCAGCAATCTCGCAAGGAAGTCCTCCTCGGGGCCTGTTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp CAGGCTTGGCAGCTTGGGCTGCCTGGTTCCGGCTGCTaGTCTCAATGTGTAAAGCCAGTAAGTGAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: QAWQLGLPGSGC*SQCVKPVSELL
Trigger: AAGAAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp CTTCAGGCTTGGCAGCTTGGGCTGCCTGGTTCCGGCTaGTGCTCTCAATGTGTAAAGCCAGTAAGTGAGCTT +
Preference number: 6 (lower is better)
Translates to: LQAWQLGLPGSG*CSQCVKPVSEL
Trigger: AAGCTCACTTACTGGCTTTACACATTGAGAGCAGCAGCCGGAACCAGGCAGCCCAAGCTGCCAAGCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS GCA 72 bp GAAGTCGATGAGAGGAAGGTCAATGAGGGGCTGGCTTaGAGCATCTGGAGTGACCGCGAGTGGTTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: EVDERKVNEGLA*SIWSDREWFQF
Trigger: AAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTCATCGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS GCA 72 bp TTACCACCTTCGTGTCTTACCTCATTGCAGAGTTCTTaGGGGGCTCAGAGGAACGTCTCCGAGCTGGCACAC +
Preference number: 6 (lower is better)
Translates to: LPPSCLTSLQSS*GAQRNVSELAH
Trigger: GTGTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS CCA 72 bp GAGGGGCTGGCTTGCAGCATCTGGAGTGACCGCGAGTaGTTCCAGTTTGATATCTACAAGAAGAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: EGLACSIWSDRE*FQFDIYKKSLG
Trigger: ACCCAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CAA 72 bp CTCTCCCTTGTTGGTTCAGTTCTCATTGCAGAGTTCTaGCGGGGCTCAGAGGAACGTCTCCGAGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: LSLVGSVLIAEF*RGSEERLRAGT
Trigger: TGTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGAACTGAACCAACAAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000479645.1
CDS GCA 72 bp GATCAGAGGCCTGCTTTCAGATCCTACAGCCACGTGTaGTTCTGGGGTATCGCAGAAGTCGATGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: DQRPAFRSYSHV*FWGIAEVDERK
Trigger: CTTCCTCTCATCGACTTCTGCGATACCCCAGAAGCACACGTGGCTGTAGGATCTGAAAGCAGGCCTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CCA 72 bp CTTCTCAGCTGGGATTTTTGTCCTGGAAGGACTAGCTaGAATCTCTTTCTTGGGCTTCTCCGCAGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LLSWDFCPGRTS*NLFLGLLRSPR
Trigger: CCTGGGGCTGCGGAGAAGCCCAAGAAAGAGATTCCAGCTAGTCCTTCCAGGACAAAAATCCCAGCTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GAGGGGCTGGCTTGCAGCATCTGGAGTGACCGCGAGTaGTTCCAGTTTGATATCTACAAGAAGAGCCTCACT +
Preference number: 6 (lower is better)
Translates to: EGLACSIWSDRE*FQFDIYKKSLT
Trigger: AGTGAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp GAGAGGAAGGTCAATGAGGGGCTGGCTTGCAGCATCTaGAGTGACCGCGAGTGGTTCCAGTTTGATATCTAC +
Preference number: 6 (lower is better)
Translates to: ERKVNEGLACSI*SDREWFQFDIY
Trigger: GTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAGCCAGCCCCTCATTGACCTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CAA 72 bp ATTACCACCTTCGTGTCTTACCTCATTGCAGAGTTCTaGCGGGGCTCAGAGGAACGTCTCCGAGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: ITTFVSYLIAEF*RGSEERLRAGT
Trigger: TGTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS CAA 90 bp GACCAATTTATTACCACCTTCGTGTCTTACCTCATTGCAGAGTTCTaGCGGGGCTCAGAGGAACGTCTCCGAGCTGGCACACACAGGGGA +
Preference number: 6 (lower is better)
Translates to: DQFITTFVSYLIAEF*RGSEERLRAGTHRG
Trigger: TCCCCTGTGTGTGCCAGCTCGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAATAAATTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS CCA 72 bp GTCAGGGAGAACATCCCGGTGGGATTCCTTCTCAGCTaGGATTTTTGTCCTGGAAGGACTAGCTGGAATCTC +
Preference number: 6 (lower is better)
Translates to: VRENIPVGFLLS*DFCPGRTSWNL
Trigger: GAGATTCCAGCTAGTCCTTCCAGGACAAAAATCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp AGGCCTGCTTTCAGATCCTACAGCCACGTGTGCTTCTaGGGTATCGCAGAAGTCGATGAGAGGAAGGTCAAT +
Preference number: 6 (lower is better)
Translates to: RPAFRSYSHVCF*GIAEVDERKVN
Trigger: ATTGACCTTCCTCTCATCGACTTCTGCGATACCCCAGAAGCACACGTGGCTGTAGGATCTGAAAGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CCA 72 bp AGGCAAAGGATTTGGTTCGGCTTAGAACTTGAGGAGTaGGGAATCCACGTTCTCCTTGTCAGCCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RQRIWFGLELEE*GIHVLLVSLRA
Trigger: AGCCCTGAGGCTGACAAGGAGAACGTGGATTCCCCACTCCTCAAGTTCTAAGCCGAACCAAATCCTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CAA 90 bp AAACCAAGGTTAAGAGCAGAGTCCAGCATCTTTCTGGCAACCATCTaGGGAGAATGTGAGCTTTGCTCATGTTCCAGGTGGGCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: KPRLRAESSIFLATI*GECELCSCSRWAGG
Trigger: ACCGCCAGCCCACCTGGAACATGAGCAAAGCTCACATTCTCCCAAGATGGTTGCCAGAAAGATGCTGGACTCTGCTCTTAACCTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS TCA 72 bp AGGGGAGCTCAGGTCTATGAGCTGTCCCACCACCGGTaGAGGTTTGGCCACATTTTTATTCATGTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RGAQVYELSHHR*RFGHIFIHVWS
Trigger: ACTCCAGACATGAATAAAAATGTGGCCAAACCTTCACCGGTGGTGGGACAGCTCATAGACCTGAGCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CCA 72 bp TTTAATTTTGACTCCTGTATGAATCTTTCCACGCCCTaGCTCCGAGGGTCTTCAGGCTTGGCAGCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: FNFDSCMNLSTP*LRGSSGLAAWA
Trigger: AGCCCAAGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAAGATTCATACAGGAGTCAAAATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CCA 72 bp TCTTATTCAATTGAGAAGATTCTGACCAAGCGCAACTaGAGTTCAGCCACTGGCCGCCACCTTCCGGAGTCT +
Preference number: 6 (lower is better)
Translates to: SYSIEKILTKRN*SSATGRHLPES
Trigger: AGACTCCGGAAGGTGGCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGAATAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CAA 72 bp CCACCAGCCTGGAATCTGTCTTTCTGTTGCTCTCCCTaGTTGGTTCAGTTCTCATTGCAGAGTTCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: PPAWNLSFCCSP*LVQFSLQSSCG
Trigger: CCCGCAAGAACTCTGCAATGAGAACTGAACCAACAAGGGAGAGCAACAGAAAGACAGATTCCAGGCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000479645.1
CDS GCA 72 bp AGACCAATTTATTACCACCTTCGTGTCTTACCTCATTaGAGAGTTCTTGCGGGGCTCAGAGGAACGTCTCCG +
Preference number: 6 (lower is better)
Translates to: RPIYYHLRVLPH*RVLAGLRGTSP
Trigger: CGGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAATAAATTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS CAA 72 bp GAGACCAATTTATTACCACCTTCGTGTCTTACCTCATaGCAGAGTTCTTGCGGGGCTCAGAGGAACGTCTCC +
Preference number: 6 (lower is better)
Translates to: ETNLLPPSCLTS*QSSCGAQRNVS
Trigger: GGAGACGTTCCTCTGAGCCCCGCAAGAACTCTGCAATGAGGTAAGACACGAAGGTGGTAATAAATTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466510.5
CDS TCA 72 bp TCTTTCAAGGCAAAGGATTTGGTTCGGCTTAGAACTTaGGGAGTGGGGAATCCACGTTCTCCTTGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: SFKAKDLVRLRT*GVGNPRSPCQP
Trigger: AGGCTGACAAGGAGAACGTGGATTCCCCACTCCTCAAGTTCTAAGCCGAACCAAATCCTTTGCCTTGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS CAA 72 bp CTCAGGTCTATGAGCTGTCCCACCACCGGTGAAGGTTaGGCCACATTTTTATTCATGTCTGGAGTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: LRSMSCPTTGEG*ATFLFMSGVFV
Trigger: GACAAACACTCCAGACATGAATAAAAATGTGGCCAAACCTTCACCGGTGGTGGGACAGCTCATAGACCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS CAA 72 bp TTAAGAGCAGAGTCCAGCATCTTTCTGGCAACCATCTaGGGAGAATGTGAGCTTTGCTCATGTTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LRAESSIFLATI*GECELCSCSRW
Trigger: CCACCTGGAACATGAGCAAAGCTCACATTCTCCCAAGATGGTTGCCAGAAAGATGCTGGACTCTGCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS CAA 72 bp CTTGCAGCATCTGGAGTGACCGCGAGTGGTTCCAGTTaGATATCTACAAGAAGAGCCTGGGTACAAAACCAA +
Preference number: 6 (lower is better)
Translates to: LAASGVTASGSS*ISTRRAWVQNQ
Trigger: TTGGTTTTGTACCCAGGCTCTTCTTGTAGATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491863.1
CDS TCA 72 bp TCTGATACTTCTAGTCTTATTCAATTGAGAAGATTCTaGCCAAGCGCAACTGGAGTTCAGCCACTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SDTSSLIQLRRF*PSATGVQPLAA
Trigger: GGCGGCCAGTGGCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGAATAAGACTAGAAGTATCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS CCA 72 bp AACCACTTTAGGGCTGTTCTTTCAAGGCAAAGGATTTaGTTCGGCTTAGAACTTGAGGAGTGGGGAATCCAC +
Preference number: 6 (lower is better)
Translates to: NHFRAVLSRQRI*FGLELEEWGIH
Trigger: GTGGATTCCCCACTCCTCAAGTTCTAAGCCGAACCAAATCCTTTGCCTTGAAAGAACAGCCCTAAAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454366.2
CDS TCA 72 bp TGGCCACATTTTTATTCATGTCTGGAGTGTTTGTCATaGGGTCGATCAGAGGCCTGCTTTCAGATCCTACAG +
Preference number: 6 (lower is better)
Translates to: WPHFYSCLECLS*GRSEACFQILQ
Trigger: CTGTAGGATCTGAAAGCAGGCCTCTGATCGACCTCATGACAAACACTCCAGACATGAATAAAAATGTGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454366.2
ENST00000491863.1
CDS TCA 72 bp GAATCTCGCCGTCTGATACTTCTAGTCTTATTCAATTaGGAAGATTCTGACCAAGCGCAACTGGAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: ESRRLILLVLFN*EDSDQAQLEFS
Trigger: GCTGAACTCCAGTTGCGCTTGGTCAGAATCTTCTCAATTGAATAAGACTAGAAGTATCAGACGGCGAGATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454366.2
ENST00000466510.5
ENST00000479645.1
CDS TCA 72 bp GACTTCATCATCTTCATTTGCACTCGAAGAAGACAATaGAAGATCGAAGTCAAATTTTTCATCGGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: DFIIFICTRRRQ*KIEVKFFIGQK
Trigger: CTTTTGGCCGATGAAAAATTTGACTTCGATCTTTCATTGTCTTCTTCGAGTGCAAATGAAGATGATGAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454366.2