RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTPBP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000130299

Ensembl transcript IDs: ENST00000324894.13, ENST00000358792.11, ENST00000361619.9, ENST00000594018.5, ENST00000594345.5, ENST00000594703.1, ENST00000595194.1, ENST00000595381.1, ENST00000595951.1, ENST00000596001.5, ENST00000596125.1, ENST00000596166.5, ENST00000596218.5, ENST00000596941.5, ENST00000598038.5, ENST00000598493.5, ENST00000598532.1, ENST00000599329.1, ENST00000599429.5, ENST00000600610.5, ENST00000600625.5, ENST00000600995.5, ENST00000601213.5, ENST00000601261.5, ENST00000602056.1, ENST00000602165.1

Found 664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTCAGCCTGCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTaGTCCACGGGCCCCACGCCCTCCCGCAACCCAGCCGTGTCGCTC +
Preference number: 1 (lower is better)
Translates to: RSACSSLSRARRTPS*STGPTPSRNPAVSL
Trigger: GAGCGACACGGCTGGGTTGCGGGAGGGCGTGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGCAGGCTGACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
3UTR GCA 90 bp GGAGGGCGTGGCCGCTGGCGGGGCCGCTGGTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGTGGCGC +
Preference number: 1 (lower is better)
Translates to: GGRGRWRGRWSGSLR*RSGLGQSLARRWWR
Trigger: GCGCCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCGGCCACGCCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 90 bp CGGAGCCGGGGGCTGGTGCGCCGCTGCTCCGGCGCGTGCACAATCTaGAACCGGAGGGGAGGCGAATCAGCGCACCTGGGAGGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RSRGLVRRCSGACTI*NRRGGESAHLGGSA
Trigger: GGCTGAGCCTCCCAGGTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCCCCGGCTCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 90 bp CTGGCGGGGCCGCTGGTCCGGATCACTGCGATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAGATGGTGGCGCCGGAGCCGGGGGCT +
Preference number: 1 (lower is better)
Translates to: LAGPLVRITAMPQRP*PELSAKMVAPEPGA
Trigger: AGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGCGGCCCCGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 90 bp CCCAGCCGTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACAC +
Preference number: 1 (lower is better)
Translates to: PSRVAQQHRKSGQVD*GLQHVTGGPWLRGH
Trigger: GTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACACGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
3UTR GCA 90 bp CAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: QVQLPIGERPSGELA*LRRSKPWHAAQGLQ
Trigger: CTGCAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR TCA 90 bp CCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: PLRSGSASHWRTPVW*TRLPPPVEALARCP
Trigger: TGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR GCA 90 bp CTGCCCAAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAGTCCTCACCGGTGAAACTCTGGGGA +
Preference number: 1 (lower is better)
Translates to: LPKACRTPLTTAGPP*TWNSTQSSPVKLWG
Trigger: TCCCCAGAGTTTCACCGGTGAGGACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 90 bp CTCTGCCCGCGCCTGGCATCTCGTAGATGTGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATGTCGGCTTGCTCCAGGACCCCCTCC +
Preference number: 1 (lower is better)
Translates to: LCPRLASRRCAPRAT*SARTSMSACSRTPS
Trigger: GGAGGGGGTCCTGGAGCAAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGCACATCTACGAGATGCCAGGCGCGGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 90 bp AAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTaGAACTCCACGCAGTCCTCACCGGTGAAACTCTGGGGACCTGGG +
Preference number: 1 (lower is better)
Translates to: KACRTPLTTAGPPCT*NSTQSSPVKLWGPG
Trigger: CCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 90 bp TCCAGCTGCCTGAGGGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTC +
Preference number: 1 (lower is better)
Translates to: SSCLRACRRCASVSA*IRSASPSTSVRFSF
Trigger: GAAGCTGAACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
3UTR CCA 90 bp TCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGACACAGGCTTCCGACTGAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: SGQVDWGLQHVTGGP*LRGHDGHRLPTEQV
Trigger: AACCTGCTCAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
3UTR GCA 90 bp CGAAACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATT +
Preference number: 1 (lower is better)
Translates to: RNKYTEILLSPSQPG*PSIKGRTGPPFSPI
Trigger: AATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
3UTR CCA 90 bp CTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCAC +
Preference number: 1 (lower is better)
Translates to: LFENQVLSQANENPN*PKLFPDPPRLLGLH
Trigger: GTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR TCA 90 bp CCCAGGGCCACCTGCAGTGCCCGTACTTCGATGTCGGCTTGCTCCAGGACCCCCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 2 (lower is better)
Translates to: PRATCSARTSMSACSRTPRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GGGGGTCCTGGAGCAAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp GGGCAGGTCTCGGGGTGCTGTGAGAATTCGGAGGGCGTGGCCGCTGGCGGGGCCTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GQVSGCCENSEGVAAGGASGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...GGCCCCGCCAGCGGCCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CCA 90 bp GAGCGGGGATCGCTGAGCAGGCGCAGGCTGGCGTGGCGAGCAAGGGGCAGGTCTAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: ERGSLSRRRLAWRARGRSSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp GAGCGGGGATCGCTGAGCAGGCGCAGGCTGGCGTGGCGAGCAAGGGGCAGGTCTGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ERGSLSRRRLAWRARGRSAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp CGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 2 (lower is better)
Translates to: RRCASVSAWIRSASPSTSDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...CGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR-3UTR TCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: QEIRPGRLGSPARHGWSLGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...CAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp CTGGTCCGGATCACTGCGATGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGCGCTGCTCCGGCGCGTaGACAATCTGGAACCGGAGG +
Preference number: 2 (lower is better)
Translates to: LVRITAMPQRPWPELSAKRCSGA*TIWNRR
Trigger: CCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCG...CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CCA 90 bp AGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SPSTSVRFSFPLANARLVRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR-3UTR GCA 90 bp CCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAAGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 2 (lower is better)
Translates to: PLHFGQVQLPIGERPSGEGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...TTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CCA 90 bp ACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGGGCGCGTGCACAATCTaGAACCGGAGGGGAGGCGAA +
Preference number: 2 (lower is better)
Translates to: TSRVVPGSGDTMDTGFRLGACTI*NRRGGE
Trigger: TTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCC...CAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CAA 90 bp ATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGA +
Preference number: 2 (lower is better)
Translates to: IRSASPSTSVRFSFP*ANARLVNSPASAGR
Trigger: TCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGGCGGACCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR-3UTR GCA 90 bp CGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RLCFRVDKVRQPLHFGQVEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...AACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp CGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RLCFRVDKVRQPLHFGQVSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...AACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR-3UTR CCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTIPRGS*VSTQLG
Trigger: CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: APASRVERDLHSAPFQGLGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp ACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGCCAGGAAGTTGCAACTaGAGGGAGAGGCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: TSRVVPGSGDTMDTGFRLPGSCN*RERPGQ
Trigger: CTGACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGG...CAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
3UTR-3UTR TCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SSYLHPNPDAPASRVERDPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: SSYLHPNPDAPASRVERDGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp GGACCCCCTCCTCCAGGTTGTCATCCTCGCCGAAATCGATATAGGCCTCCACGTATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 2 (lower is better)
Translates to: GPPPPGCHPRRNRYRPPRMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...ACGTGGAGGCCTATATCGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCAGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 2 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPAASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR GCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 2 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp CATCTCGTAGATGTGCACCCAGGGCCACCTGCAGTGCCCGTACTTCGATGTCGGGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 2 (lower is better)
Translates to: HLVDVHPGPPAVPVLRCRETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...CCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGCACATCTACGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp CTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAAGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: LRSSYLHPNPDAPASRVEGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...TTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR TCA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGCCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
3UTR-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 2 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
3UTR-3UTR CCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTNENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPNENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: PASRVERDLHSAPFQGLNNENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR GCA 90 bp AGACACACATTAAGCCATGACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTCCAAGGTCGCACCACTaGACTCCAGCCTGGGCAATA +
Preference number: 2 (lower is better)
Translates to: RHTLSHDNHRRAKENFHVPRSHH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAGTGGTGCGACCTTGG...AACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTCATGGCTTAATGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
3UTR GCA 72 bp CGGAGCCGGGGGCTGGTGCGCCGCTGCTCCGGCGCGTaGACAATCTGGAACCGGAGGGGAGGCGAATCAGCG +
Preference number: 3 (lower is better)
Translates to: RSRGLVRRCSGA*TIWNRRGGESA
Trigger: CGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCCCCGGCTCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp GGCCGCTGGCGGGGCCGCTGGTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGA +
Preference number: 3 (lower is better)
Translates to: GRWRGRWSGSLR*RSGLGQSLARR
Trigger: TCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp CAGGCTGGCGTGGCGAGCAAGGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGCGTGGCCGCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: QAGVASKGQVSG*CENSEGVAAGG
Trigger: CCCGCCAGCGGCCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCCCTTGCTCGCCACGCCAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 72 bp GGCAGGTCTCGGGGTGCTGTGAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTGGTCCGGATCACTGCG +
Preference number: 3 (lower is better)
Translates to: GRSRGAVRIRRA*PLAGPLVRITA
Trigger: CGCAGTGATCCGGACCAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 72 bp GGGCTGGTGCGCCGCTGCTCCGGCGCGTGCACAATCTaGAACCGGAGGGGAGGCGAATCAGCGCACCTGGGA +
Preference number: 3 (lower is better)
Translates to: GLVRRCSGACTI*NRRGGESAHLG
Trigger: TCCCAGGTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp CACGCTGCCCAAGGCCTGCAGGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTGGAACTCCACGCAGTC +
Preference number: 3 (lower is better)
Translates to: HAAQGLQDAAHH*RASMHVELHAV
Trigger: GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR GCA 72 bp AGGTGGCCCAGCTCTCCGTCCAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGG +
Preference number: 3 (lower is better)
Translates to: RWPSSPSSCLRA*RRCASVSAWIR
Trigger: CCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCTGGGCCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
3UTR CCA 72 bp CCGCTGGTCCGGATCACTGCGATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAGATGGTGGCGCCGGAG +
Preference number: 3 (lower is better)
Translates to: PLVRITAMPQRP*PELSAKMVAPE
Trigger: CTCCGGCGCCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 72 bp CGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACACGATGGACACAGGCT +
Preference number: 3 (lower is better)
Translates to: RPGRLGSPARHG*SLAPGTRWTQA
Trigger: AGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
3UTR GCA 72 bp CTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAA +
Preference number: 3 (lower is better)
Translates to: LPIGERPSGELA*LRRSKPWHAAQ
Trigger: TTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR CCA 72 bp CTACGTGCACCCCTGAGCGGAGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCACCCAGGGCCACCTGCA +
Preference number: 3 (lower is better)
Translates to: LRAPLSGASARA*HLVDVHPGPPA
Trigger: TGCAGGTGGCCCTGGGTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp GCCTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAGTCCTCACCGGTGAAA +
Preference number: 3 (lower is better)
Translates to: ACRTPLTTAGPP*TWNSTQSSPVK
Trigger: TTTCACCGGTGAGGACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp CCAGTGACCACTACGTGCACCCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGTAGATGTGCACCCAGG +
Preference number: 3 (lower is better)
Translates to: PVTTTCTPERSL*PRLASRRCAPR
Trigger: CCTGGGTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTGGTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CCA 72 bp GTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGACACAGGCTTCCGACT +
Preference number: 3 (lower is better)
Translates to: VDWGLQHVTGGP*LRGHDGHRLPT
Trigger: AGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
3UTR CCA 72 bp GTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: VAQQHRKSGQVD*GLQHVTGGPWL
Trigger: GAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
3UTR TCA 72 bp TCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCA +
Preference number: 3 (lower is better)
Translates to: SGSASHWRTPVW*TRLPPPVEALA
Trigger: TGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
3UTR CCA 72 bp AGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTaGAACTCCACGCAGTCCTCACCGGTGAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: RTPLTTAGPPCT*NSTQSSPVKLW
Trigger: CCAGAGTTTCACCGGTGAGGACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR GCA 72 bp CGCCTGGCATCTCGTAGATGTGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATGTCGGCTTGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RLASRRCAPRAT*SARTSMSACSR
Trigger: CCTGGAGCAAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGCACATCTACGAGATGCCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR-3UTR CAA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR CCA 72 bp ATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: IGLNCFQIPRGS*VSTQLGCDFPG
Trigger: TCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR GCA 72 bp TATACTGAGATCCTCCTATCTCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGAACGGGACCTCCATTC +
Preference number: 3 (lower is better)
Translates to: YTEILLSPSQPG*PSIKGRTGPPF
Trigger: GAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTACCTCTCAGCTGTGTaGCTTCACTATTTGAGAATC +
Preference number: 3 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTYLSAV*LHYLRI
Trigger: GATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTA...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCTACCTCTCAGCTGTGTaGCTTCACTATTTGAGAATC +
Preference number: 3 (lower is better)
Translates to: HPNPDAPASRVERDLHSAYLSAV*LHYLRI
Trigger: GATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTA...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTVLLHY*RIKFFP
Trigger: GGGAAAGAACTTGATTCTCAAATAGTGAAGCAACAC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGVLLHY*RIKFFP
Trigger: GGGAAAGAACTTGATTCTCAAATAGTGAAGCAACAC...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR-3UTR CAA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: AGISLPLSCVASLFENQVGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR CCA 72 bp AATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: NQVLSQANENPN*PKLFPDPPRLL
Trigger: CAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTGCTCCACGGGCCCCACGCCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: ALASPGRAARPPAPRAPRPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...GCGTGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594018.5
CDS-3UTR GCA 90 bp GCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTGCTCCACGGGCCCCACGCGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALASPGRAARPPAPRAPRAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...GCGTGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000598493.5
CDS-3UTR CCA 90 bp CCTGCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTGCTCCACGGGCCCCATTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PALASPGRAARPPAPRAPLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...TGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000598493.5
CDS-3UTR TCA 90 bp AGGGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: RACRRCASVSAWIRSASPRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR TCA 90 bp GCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTGCTCCACGGGCCCCACGCCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALASPGRAARPPAPRAPRRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...GCGTGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000598493.5
CDS-3UTR GCA 90 bp AGGGCGTGGCCGCTGGCGGGGCCGCTGGTCCGGATCACTGCGATGCCGCAGCGGGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RAWPLAGPLVRITAMPQREPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...CCGCTGCGGCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCGGCCACGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp CGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: RPSGELACLRRSKPWHAARWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...GGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp AGCCCTGGCACGCTGCCCAAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPGTLPKACRTPLTTAGPRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...AGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGTGCCAGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QHVTGGPWLRGHDGHRLPLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...CGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR TCA 90 bp GTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: VSSTSRVVPGSGDTMDTGLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...GCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RRCASVSAWIRSASPSTSLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...CGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLPPLRLCFRVDKVRQPLSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR CCA 90 bp AGCCCTGGCACGCTGCCCAAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPGTLPKACRTPLTTAGPSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...AGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGTGCCAGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKARWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp GCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ARLVNSPASAGRSPGTLPRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...GGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGTCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: QDAAHHCRASMHVELHAVRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCACGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LQDAAHHCRASMHVELHARSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...TGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: QVDWGLQHVTGGPWLRGHRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...GTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR TCA 90 bp TTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LANARLVNSPASAGRSPGRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...GCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp AGCCCTGGCACGCTGCCCAAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTTGCAGATGGGGAAACTaGGGCTCCGAGGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: SPGTLPKACRTPLTTAGPCRWGN*GSEAGT
Trigger: GGTCCCCGCCTCGGAGCCTCAGTTTCCCCATCTGCA...AGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGTGCCAGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601213.5
CDS-3UTR GCA 90 bp AGCCCTGGCACGCTGCCCAAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SPGTLPKACRTPLTTAGPSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...AGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGTGCCAGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QVDWGLQHVTGGPWLRGHSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCGCTGCTCCGGCGCGTaGACAATCGCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SGELACLRRSKPWHAAQGRCSGA*TIAWAA
Trigger: GGCGGCCCAAGCGATTGTGCACGCGCCGGAGCAGCG...GCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKALARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: PGRLGSPARHGWSLAPGTRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QVDWGLQHVTGGPWLRGHRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...GTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GGCAGGTCTCGGGGTGCTGTGAGAATTCGGAGGGCGTGGCCGCTGGCGGGGCCGGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: GRSRGAVRIRRAWPLAGPVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...CGGCCCCGCCAGCGGCCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR TCA 90 bp GCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AQEIRPGRLGSPARHGWSRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGTCCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: QDAAHHCRASMHVELHAVRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QHVTGGPWLRGHDGHRLPHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...CGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CCTGCTCTAGCCTCTCCCGGGCGCGCCGCACGCCCTCCTGCTCCACGGGCCCCACATGGATTTACAACCTaGGACCCGCCTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: PALASPGRAARPPAPRAPHGFTT*DPPARP
Trigger: AGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATG...TGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGCTAGAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR GCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACAGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLPPLRLCFRVDKVRQPLSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...GAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp TTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LANARLVNSPASAGRSPGDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...GCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKATLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGTCAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: QDAAHHCRASMHVELHAVRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSGELACLRRSKPWHAAQSCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...TTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: RPGRLGSPARHGWSLAPGAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...CCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAACCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: PSGELACLRRSKPWHAAQPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...TTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QHVTGGPWLRGHDGHRLPRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...CGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RRCASVSAWIRSASPSTSRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...CGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHRRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CRTPLTTAGPPCTWNSTQRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp GGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGAGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: GQVDWGLQHVTGGPWLRGVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...TCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: QQHRKSGQVDWGLQHVTGRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...ACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QEIRPGRLGSPARHGWSLHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...CAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp ACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TSRVVPGSGDTMDTGFRLSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...CAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACACGCTGCTCCGGCGCGTaGACAATCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GVSSTSRVVPGSGDTMDTRCSGA*TICEAH
Trigger: GTGGGCCTCGCAGATTGTGCACGCGCCGGAGCAGCG...TGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000598493.5
CDS-3UTR GCA 90 bp GCGATGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGTGGCGCCGGAGTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AMPQRPWPELSAKMVAPESGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...CTCCGGCGCCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKAGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GAGGGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: EGLPPLRLCFRVDKVRQPTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...GGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: GVSSTSRVVPGSGDTMDTDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...TGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACAACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: PGRLGSPARHGWSLAPGTTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WGLQHVTGGPWLRGHDGHSCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...GTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGAGAATGAGGTCAGCCTaGTCTAGCCTCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RPGRLGSPARHGWSLAPGRMRSA*SSLSRA
Trigger: CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCT...CCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR GCA 90 bp CGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATA +
Preference number: 4 (lower is better)
Translates to: RRCASVSAWIRSASPSTSGLVRR*SGACTI
Trigger: TATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...CGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601213.5
CDS-3UTR CCA 90 bp CCCAGGGCCACCTGCAGTGCCCGTACTTCGATGTCGGCTTGCTCCAGGACCCCCTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRATCSARTSMSACSRTPLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...GGGGGTCCTGGAGCAAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp AAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KSGQVDWGLQHVTGGPWLRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...GAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHRRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CCGCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPAPPLRSGSASHWRTPVRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...GACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKAASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCCGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: LVNSPASAGRSPGTLPKAASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...GGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: QHVTGGPWLRGHDGHRLPPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...CGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACAGGTCTCGGGGTGCTGTaGGAATTCGGAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTGLGVL*EFGGRG
Trigger: GCCACGCCCTCCGAATTCTCACAGCACCCCGAGACC...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSARSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ERPSGELACLRRSKPWHARSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...AGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp AGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSTGNPARSTGVSSTSRVRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...CACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR TCA 90 bp CACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVTGGPWLRGHDGHRLPTGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...AGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR TCA 90 bp CTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LSSTGNPARSTGVSSTSRHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QQHRKSGQVDWGLQHVTGSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...ACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TCCGGATCACTGCGATGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGSLRCRSGLGQSLARRWSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...CCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp CTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: LSSTGNPARSTGVSSTSRGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CGCTGCTCCGGCGCGTGCACAATCTGGAACCGGAGGGGAGGCGAATCAGCGCACGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RCSGACTIWNRRGGESAHAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...GTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACAGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHREPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGTCGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QDAAHHCRASMHVELHAVEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LQDAAHHCRASMHVELHAEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...TGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: ERPSGELACLRRSKPWHATAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...AGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: AQEIRPGRLGSPARHGWSDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...GGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHRTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WGLQHVTGGPWLRGHDGHSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...GTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VAQQHRKSGQVDWGLQHVSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPARHGWSLAPGTRWTQASLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...AGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HVTGGPWLRGHDGHRLPTSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...AGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QEIRPGRLGSPARHGWSLSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...CAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: PSGELACLRRSKPWHAAQMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...TTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp GAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: ERPSGELACLRRSKPWHAMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...AGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LSSTGNPARSTGVSSTSRRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VSLSSTGNPARSTGVSSTRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...CGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QEIRPGRLGSPARHGWSLRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...CAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARLVNSPASAGRSPGTLPSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...GGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPIGERPSGELACLRRSKQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...CTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACAGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: WGLQHVTGGPWLRGHDGHSGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...GTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGTCAGGACCGGGACCTaGGCCCTCCGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPVRTGT*ALRGQQ
Trigger: CTGCTGTCCCCGGAGGGCCCAGGTCCCGGTCCTGAC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGGGTCTCGGGGTGCTGTaGGAATTCGGAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RKSGQVDWGLQHVTGGPWGLGVL*EFGGRG
Trigger: GCCACGCCCTCCGAATTCTCACAGCACCCCGAGACC...CCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTTACCCCCTCCACCTGTaGGCCGGGTCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPYPLHL*AGSGDP
Trigger: GGGGTCACCTGACCCGGCTCACAGGTGGAGGGGGTA...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACTCGATGTCGGTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WGLQHVTGGPWLRGHDGHSMSVW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAACCGACATCGA...GTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594018.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCGCTGCTCCGGCGCGTaGACAATCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDRCSGA*TICEAH
Trigger: GTGGGCCTCGCAGATTGTGCACGCGCCGGAGCAGCG...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp GAAGCATCCAGCATGGCCAGAATGAGGTCAGCCTGCTCTAGCCTCTCCCGGGCGGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: EASSMARMRSACSSLSRAGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGGATGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR GCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp GGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: GQVQLPIGERPSGELACLGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...GAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp TCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPARHGWSLAPGTRWTQASGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...AGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp AGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RKSGQVDWGLQHVTGGPWAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...CCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHRTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSRVVPGSGDTMDTGFRLSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...CAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDSCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGSSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCTGCTCCGGCGCGTGCACAATCTGGAACCGGAGGGGAGGCGAATCAGCGCACCGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: AAPARAQSGTGGEANQRTAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...GGTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATGGAGGAGGCGCTGGCTaGTGTCACTGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDGGGAG*CHWGSG
Trigger: CCCAGAGCCCCAGTGACAGCAGCCAGCGCCTCCTCC...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCTGGAGGTGGTGCTGGTaGCTTGCTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPWRWCW*LARVSS
Trigger: GCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCA...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCCAGGTAGACCCACCTTaGTCCAGGACCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPQVDPP*SRTPSS
Trigger: GGAGGAGGGGGTCCTGGAGCAAGGTGGGTCTACCTG...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358792.11
CDS-3UTR CCA 90 bp CAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QHRKSGQVDWGLQHVTGGLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...ACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp AGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RFSFPLANARLVNSPASALARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...GGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QVQLPIGERPSGELACLRSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...GCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACAATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PAPPLRSGSASHWRTPVWRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...CCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp TGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRTPLTTAGPPCTWNSTQASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QHRKSGQVDWGLQHVTGGQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...ACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CCA 90 bp AGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: STGNPARSTGVSSTSRVVQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...GACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTGTCAGGACCGGGACCTaGGCCCTCCGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATVRTGT*ALRGQQ
Trigger: CTGCTGTCCCCGGAGGGCCCAGGTCCCGGTCCTGAC...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGGTCTCGGGGTGCTGTaGGAATTCGGAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPGLGVL*EFGGRG
Trigger: GCCACGCCCTCCGAATTCTCACAGCACCCCGAGACC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSYLHPNPDAPASRVERDRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTACCCCCTCCACCTGTaGGCCGGGTCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATYPLHL*AGSGDP
Trigger: GGGGTCACCTGACCCGGCTCACAGGTGGAGGGGGTA...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAAGACCGAGGGCTCGATaGTCGCGAGATGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVSSTSRVVPGSGDTMDTRPRAR*SRDAPG
Trigger: ACCTGGAGCATCTCGCGATCATCGAGCCCTCGGTCT...TGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp GAAGCATCCAGCATGGCCAGAATGAGGTCAGCCTGCTCTAGCCTCTCCCGGGCGCGCTGCTCCGGCGCGTaGACAATCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EASSMARMRSACSSLSRARCSGA*TICEAH
Trigger: GTGGGCCTCGCAGATTGTGCACGCGCCGGAGCAGCG...CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGGATGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR GCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCGCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PPAPPLRSGSASHWRTPVGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...GACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp AGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: RKSGQVDWGLQHVTGGPWTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...CCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp AGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: SPSTSVRFSFPLANARLVDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: CASVSAWIRSASPSTSVRTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...CCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCATTGGGGAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: DTGFRLSRFTRLLLPALGRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...CCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: QHVTGGPWLRGHDGHRLPAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...CGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTGGAGGAGGCGCTGGCTaGTGTCACTGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATGGGAG*CHWGSG
Trigger: CCCAGAGCCCCAGTGACAGCAGCCAGCGCCTCCTCC...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCGGAGGAGGCGCTGGCTaGTGTCACTGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSGGGAG*CHWGSG
Trigger: CCCAGAGCCCCAGTGACAGCAGCCAGCGCCTCCTCC...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGGAGGAGGCGCTGGCTaGTGTCACTGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTGGGAG*CHWGSG
Trigger: CCCAGAGCCCCAGTGACAGCAGCCAGCGCCTCCTCC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTVVLVP*SGQQRG
Trigger: CCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCAC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGVVLVP*SGQQRG
Trigger: CCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCAC...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGCGCTGCTCCGGCGCGTaGACAATCTGGAACCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSTGNPARSTGVSSTSRVRCSGA*TIWNRR
Trigger: CCTCCGGTTCCAGATTGTGCACGCGCCGGAGCAGCG...CACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp ACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACCAGGGCCACCTGCAGTaGCCGTACTTCGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: TGVSSTSRVVPGSGDTMDQGHLQ*PYFDVG
Trigger: ACCGACATCGAAGTACGGGCACTGCAGGTGGCCCTG...GTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594018.5
CDS-3UTR GCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCGGTGGCCAGGAAGTTaGAACTCTCCCGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSARWPGS*NSPGRA
Trigger: GGCGCGCCCGGGAGAGTTGCAACTTCCTGGCCACCG...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600625.5
CDS-3UTR CCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSASLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: PSTSVRFSFPLANARLVNRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...GTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQVQLPIGERPSGELACLRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...GAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACAGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGRLGSPARHGWSLAPGTETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HVTGGPWLRGHDGHRLPTASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...AGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPSGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: VAQQHRKSGQVDWGLQHVSGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...GACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTCAGGACCGGGACCTaGGCCCTCCGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWVRTGT*ALRGQQ
Trigger: CTGCTGTCCCCGGAGGGCCCAGGTCCCGGTCCTGAC...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCCCCTGGAGGTGGTGCTaGTGCCTTGCTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPPWRWC*CLARVS
Trigger: GCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGG...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGAGCGAATCAGCGCACCTaGGAGGCTCAGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: DWGLQHVTGGPWLRGHDGANQRT*EAQPQC
Trigger: ACACTGAGGCTGAGCCTCCCAGGTGCGCTGATTCGC...TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
3UTR CAA 72 bp GCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASPSTSVRFSFP*ANARLVNSPAS
Trigger: GGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGGTCTCGGGGTGCTGTaGGAATTCGGAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTGLGVL*EFGGRG
Trigger: GCCACGCCCTCCGAATTCTCACAGCACCCCGAGACC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCACGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSSTGNPARSTGVSSTSRRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR TCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCCAGCATGGCCAGAATaGGGTCAGCCTGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KSGQVDWGLQHVTGGPWLPAWPE*GQPALA
Trigger: GGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGG...GAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR TCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGTACCCCCTCCACCTGTaGGCCGGGTCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWYPLHL*AGSGDP
Trigger: GGGGTCACCTGACCCGGCTCACAGGTGGAGGGGGTA...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCTGCAGATGGGGAAACTaGGGCTCCGAGGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSACRWGN*GSEAGT
Trigger: GGTCCCCGCCTCGGAGCCTCAGTTTCCCCATCTGCA...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361619.9
CDS-3UTR GCA 90 bp GTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGCCCGCCTGCCCGACCTaGCTGTGTGGCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: VSLSSTGNPARSTGVSSTPACPT*LCGFKS
Trigger: AGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGG...CGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR GCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGCCCGCCTGCCCGACCTaGCTGTGTGGCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLPACPT*LCGFKS
Trigger: AGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGG...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp GGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQVQLPIGERPSGELACLSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...GAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RLCFRVDKVRQPLHFGQVAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...AACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp AGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPSTSVRFSFPLANARLVAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSLSSTGNPARSTGVSSTGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...CGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: LHFGQVQLPIGERPSGELRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...GAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR GCA 90 bp GGATCACTGCGATGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGTGGCAGGGCCACCTGCAGTaGCCGTACTTCGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: GSLRCRSGLGQSLARRWWQGHLQ*PYFDVG
Trigger: GCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTG...CCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp GTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGAGGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: VTGGPWLRGHDGHRLPTEAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...CTCAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGTGGAGGTGGTGCTGGTaGCTTGCTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLWRWCW*LARVSS
Trigger: GCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCA...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTCAACCCTGGAGGTGGTaGTGGTGCCTTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPQPWRW*WCLARV
Trigger: GACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTG...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCAACCCTGGAGGTGGTaGTGGTGCCTTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDQPWRW*WCLARV
Trigger: GACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTG...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: CASVSAWIRSASPSTSVRMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...CCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLQHVTGGPWLRGHDGHRETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...CCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTGGAACTCCACGCAGTCGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: QDAAHHCRASMHVELHAVETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...GACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: PARHGWSLAPGTRWTQASSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...GGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACATCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGSPARHGWSLAPGTRWTSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...TGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LHFGQVQLPIGERPSGELRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...GAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp TTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FQIPRGSWVSTQLGCDFPASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...AGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: STGNPARSTGVSSTSRVVASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...GACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCGCTGGCTGCTGTCACTaGGGCTCTGGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSAGCCH*GSGLPQ
Trigger: CTGTGGGAGCCCAGAGCCCCAGTGACAGCAGCCAGC...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTGCTGGCTGCTGTCACTaGGGCTCTGGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATAGCCH*GSGLPQ
Trigger: CTGTGGGAGCCCAGAGCCCCAGTGACAGCAGCCAGC...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATGTCAGGACCGGGACCTaGGCCCTCCGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNVRTGT*ALRGQQ
Trigger: CTGCTGTCCCCGGAGGGCCCAGGTCCCGGTCCTGAC...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGCAGCGGGGGATCTGTaGACGGGTCCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGAAGDL*TGPHTL
Trigger: CAGTGTGTGGGGACCCGTCCACAGATCCCCCGCTGC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCAGGCAACCCTGGAGGTaGTGCTGGTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPRQPWR*CWCLAR
Trigger: CCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCT...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDIPRGS*VSTQLG
Trigger: CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TCCGGATCACTGCGATGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGGGCGCGTGCACAATCTaGAACCGGAGGGGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SGSLRCRSGLGQSLARRWGACTI*NRRGGE
Trigger: TTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGCC...CCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp CAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCGCGTGCACAATCGCTTaGGCCGCCAGGGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QVQLPIGERPSGELACLRACTIA*AARVQS
Trigger: GCTTTGGACCCTGGCGGCCCAAGCGATTGTGCACGC...GCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602165.1
CDS-3UTR TCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACGGTCTCGGGGTGCTGTaGGAATTCGGAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SSYLHPNPDAPASRVERDGLGVL*EFGGRG
Trigger: GCCACGCCCTCCGAATTCTCACAGCACCCCGAGACC...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTCCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASVSAWIRSASPSTSVRFRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...GAACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR TCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCACGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACGGCAGGAGAAGCGCTTaGGCCCCGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDGRRSA*APEMEV
Trigger: AACCTCCATCTCCGGGGCTCAAGCGCTTCTCCTGCC...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGCCTGCCCGACCTaGCTGTGTGGCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSPACPT*LCGFKS
Trigger: AGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGG...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp CCGCCAGCCCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCCATGGATTTACAACCTaGGACCCGCCTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: PPAPPLRSGSASHWRTPVHGFTT*DPPARP
Trigger: AGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATG...GACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGGGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602165.1
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCACGCTGCTCCGGCGCGTaGACAATCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHARCSGA*TICEAH
Trigger: GTGGGCCTCGCAGATTGTGCACGCGCCGGAGCAGCG...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSYLHPNPDAPASRVERDSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCATTGGGGTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DTGFRLSRFTRLLLPALGSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...CCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SIPTRMPQHQGSNGTSIQEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...CTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: ASVSAWIRSASPSTSVRFTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...GAACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHADAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LHFGQVQLPIGERPSGELDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...GAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: SSYLHPNPDAPASRVERDTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCAAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPASCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR GCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTCAGGGCCACCTGCAGTaGCCGTACTTCGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATQGHLQ*PYFDVG
Trigger: GCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTG...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCAGGGCCACCTGCAGTaGCCGTACTTCGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPQGHLQ*PYFDVG
Trigger: GCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTG...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: RFSFPLANARLVNSPASAAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...GGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR GCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNVVLVP*SGQQRG
Trigger: CCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCAC...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCCAACCCTGGAGGTGGTaGTGGTGCCTTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTQPWRW*WCLARV
Trigger: GACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTG...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATTCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDSTQLG*DFPGSR
Trigger: ACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGA...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATG +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESGLVRR*SGACTM
Trigger: CATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361619.9
CDS-3UTR CCA 90 bp CCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCAAAGCCCCCGCCACATaGATTTACAACCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: PARHGWSLAPGTRWTQASKAPAT*IYNLRP
Trigger: GGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTT...GGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: CRSAAQEIRPGRLGSPARMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...ACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCAAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LPIGERPSGELACLRRSKETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...CTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRSSYLHPNPDAPASRVERRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...TTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSAASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCACCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPAPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGGCTGGCTGCTGTCACTaGGGCTCTGGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SIPTRMPQHQGSNGTSIQAGCCH*GSGLPQ
Trigger: CTGTGGGAGCCCAGAGCCCCAGTGACAGCAGCCAGC...CTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGCCCTGGAGGTGGTGCTaGTGCCTTGCTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWPWRWC*CLARVS
Trigger: GCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGG...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLWVRLP*IPSLAH
Trigger: GTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCA...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SIPTRMPQHQGSNGTSIQPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...CTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCGCTGCTCCGGCGCGTaGACAATCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESRCSGA*TICEAH
Trigger: GTGGGCCTCGCAGATTGTGCACGCGCCGGAGCAGCG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATTCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LHFGQVQLPIGERPSGELSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...GAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR GCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAAGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRSSYLHPNPDAPASRVEVVLVP*SGQQRG
Trigger: CCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCAC...TTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSPSQPG*PSIKGR
Trigger: TCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGAAAGCCCCCGCCACATaGATTTACAACCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: QEIRPGRLGSPARHGWSLKAPAT*IYNLRP
Trigger: GGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTT...CAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: VSLSSTGNPARSTGVSSTETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...CGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GTGTCGCTCAGCAGCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: VSLSSTGNPARSTGVSSTSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...CGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGAGCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTCAGGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCFRVDKVRQPLHFGQVQASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...CTGAACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCACCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCATCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPASGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDQRLRR*PGSCNW
Trigger: CCAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTG...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTGGCTGCTGTCACTaGGGCTCTGGGCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAAGCCH*GSGLPQ
Trigger: CTGTGGGAGCCCAGAGCCCCAGTGACAGCAGCCAGC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGCAGCGGGGGATCTGTaGACGGGTCCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTAAGDL*TGPHTL
Trigger: CAGTGTGTGGGGACCCGTCCACAGATCCCCCGCTGC...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCCCTGGAGGTGGTGCTaGTGCCTTGCTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNPWRWC*CLARVS
Trigger: GCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGG...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGAGGCAACCCTGGAGGTaGTGCTGGTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWRQPWR*CWCLAR
Trigger: CCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCT...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGCATCCAGGCAACCCTaGAGGTGGTGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGASRQP*RWCWCL
Trigger: AAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGWVRLP*IPSLAH
Trigger: GTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCA...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNIPRGS*VSTQLG
Trigger: CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GGACCCCCTCCTCCAGGTTGTCATCCTCGCCGAAATCGATATAGGCCTCCACGTCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPPPPGCHPRRNRYRPPRRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...ACGTGGAGGCCTATATCGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR TCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCACTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCAGGGCCAGGTCTTTTaGCTGCTTGTAGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HPNPDAPASRVERDLHSAQGQVF*LLVVAE
Trigger: CTCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTG...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGCAGGGCCAGGTCTTTTaGCTGCTTGTAGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGQGQVF*LLVVAE
Trigger: CTCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTG...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCAGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPAGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCACAACCCTGGAGGTGGTaGTGGTGCCTTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAQPWRW*WCLARV
Trigger: GACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTG...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACAGAATGCACCATCAGTaGGGGCGGGGACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSYLHPNPDAPASRVERDRMHHQ*GRGPAA
Trigger: TGCTGCTGGTCCCCGCCCGCACTGATGGTGCATTCT...GTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361619.9
CDS-3UTR GCA 90 bp AAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCTCTGCGGCTGGGGGATaGACAAATTGGATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KSGQVDWGLQHVTGGPWLSAAGG*TNWMFC
Trigger: GCAGAACATCCAATTTGTGCATCCCCCAGCCGCAGA...GAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CCA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCCTCTGTTTCCGCGTaGATAAGGTCCGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAASVSA*IRSASP
Trigger: GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCAGGAAGTTGCAACTaGAGGGAGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCPSIKGRTGPPFSPIPGPGSCN*RERPGQ
Trigger: CTGACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGG...CCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATAGGCAACCCTGGAGGTaGTGCTGGTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNRQPWR*CWCLAR
Trigger: CCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGACCAGAAGAAAGCATaGGTGGGGACAAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RRCASVSAWIRSASPSTSDQKKA*VGTSWR
Trigger: TCTCCAACTTGTCCCCACCCATGCTTTCTTCTGGTC...CGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601213.5
CDS-3UTR TCA 90 bp TCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCAGGGCCAGGTCTTTTaGCTGCTTGTAGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SIPTRMPQHQGSNGTSIQQGQVF*LLVVAE
Trigger: CTCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTG...CTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTACCCCCTCCACCTGTaGGCCGGGTCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSYPLHL*AGSGDP
Trigger: GGGGTCACCTGACCCGGCTCACAGGTGGAGGGGGTA...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAGAAGTCCTGGAAGATaGTGTCCAGGATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: APASRVERDLHSAPFQGLRSPGR*CPGSPR
Trigger: CCGAGGAGATCCTGGACATCATCTTCCAGGACTTCT...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCAGGGCCACCTGCAGTaGCCGTACTTCGATGTCGGC +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESQGHLQ*PYFDVG
Trigger: GCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAAGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: LRSSYLHPNPDAPASRVEAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...TTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATAGAATGAGGTCAGCCTaGTCTAGCCTCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNRMRSA*SSLSRA
Trigger: CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR GCA 90 bp CTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAATGGAGGTGGTGCTGGTaGCTTGCTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRSSYLHPNPDAPASRVEWRWCW*LARVSS
Trigger: GCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCA...TTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCTGGATCCCGTCACTTaGCCACACAGAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSLDPVT*PHRSPG
Trigger: TCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAG...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATTCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNSTQLG*DFPGSR
Trigger: ACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGA...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTAAAGCCCCCGCCACATaGATTTACAACCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: TVSRSPEAPGSPRSLGATKAPAT*IYNLRP
Trigger: GGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTT...AGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCAGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCATTGGGGCCAGGAAGTTGCAACTaGAGGGAGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DTGFRLSRFTRLLLPALGPGSCN*RERPGQ
Trigger: CTGACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGG...CCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598493.5
CDS-3UTR CCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSIPRGS*VSTQLG
Trigger: CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCTCCACTTCGGTCAGGTTGGGGGATGCACAAATTaGATGTTCTGCGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RLCFRVDKVRQPLHFGQVGGCTN*MFCEAH
Trigger: GTGGGCCTCGCAGAACATCCAATTTGTGCATCCCCC...AACCTGACCGAAGTGGAGGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR TCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGGTAGGCAGATTACCTaGGGTCAAGGAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPGRQIT*GQGVQD
Trigger: GTCTTGAACTCCTTGACCTCAGGTAATCTGCCTACC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp CTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAACCTGCGACCCGCCTaGCCGACCTGCCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSQANENPNWPKLFPDPPNLRPA*PTCLCG
Trigger: GCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTT...CGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCACATGGATTTACAACCTaGGACCCGCCTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAHGFTT*DPPARP
Trigger: AGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATG...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCGGGCTGGTGCGCCGCTaGTCCGGCGCGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIGLVRR*SGACTI
Trigger: GATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp CTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSQANENPNWPKLFPDPPSCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...CGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESPSQPG*PSIKGR
Trigger: TCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCCGGAGATGGAGGTTaGAGTGAGCCAAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESPGDGG*SEPRSH
Trigger: GTGCGACCTTGGCTCACTGCAACCTCCATCTCCGGG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp CTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACTCTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHFGQVQLPIGERPSGELSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...GAGTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CCA 90 bp CTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: LSQANENPNWPKLFPDPPPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...CGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCACCAGGAAGTTGCAACTaGAGGGAGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAPGSCN*RERPGQ
Trigger: CTGACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGG...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGCAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTQRLRR*PGSCNW
Trigger: CCAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTG...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp AGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCACACAGAAGTCCTaGAAGATGATGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: RSPEAPGSPRSLGATSLDPTQKS*KMMSRI
Trigger: GATCCTGGACATCATCTTCCAGGACTTCTGTGTGGG...ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCATGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPWVRLP*IPSLAH
Trigger: GTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCA...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QVLSQANENPNWPKLFPDLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCGGGCCAGAGCTTTGGTaGGGGTCTCGGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIGPELW*GSRPSH
Trigger: GTGGCTGGGCCGAGACCCTCACCAAAGCTCTGGCCC...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCCCAGCATGGCCAGAATaGGGTCAGCCTGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSPAWPE*GQPALA
Trigger: GGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGG...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGCTGGATCCCGTCACTTaGCCACACAGAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTLDPVT*PHRSPG
Trigger: TCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAG...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSPSQPG*PSIKGR
Trigger: TCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCAAAAGCCCCCGCCACATaGATTTACAACCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPAKAPAT*IYNLRP
Trigger: GGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTT...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CCA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGATTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCGCATCCAGGCAACCCTaGAGGTGGTGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSASRQP*RWCWCL
Trigger: AAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGC...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCCCCACACAGAAGTCCTaGAAGATGATGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTPTQKS*KMMSRI
Trigger: GATCCTGGACATCATCTTCCAGGACTTCTGTGTGGG...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGGACCAGAAGAAAGCATaGGTGGGGACAAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGDQKKA*VGTSWR
Trigger: TCTCCAACTTGTCCCCACCCATGCTTTCTTCTGGTC...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361619.9
CDS-3UTR TCA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQIRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTCTCCGTCCAGCTGCCTaGGGGCCTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCLRPAA*GPAAAA
Trigger: CGCAGCGGCGGCAGGCCCTCAGGCAGCTGGACGGAG...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAAGAAGTCCTGGAAGATaGTGTCCAGGATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHARSPGR*CPGSPR
Trigger: CCGAGGAGATCCTGGACATCATCTTCCAGGACTTCT...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCATCCGGATCACTGCGATaGCGCAGCGGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASSGSLR*RSGLGQ
Trigger: CTGGCCAAGGCCGCTGCGGCATCGCAGTGATCCGGA...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSITLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCAGAATGAGGTCAGCCTaGTCTAGCCTCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSRMRSA*SSLSRA
Trigger: CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCT...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCAGCTTAGCGCGAAGATaGTGGCGCCGGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPSLARR*WRRSRG
Trigger: CCCCCGGCTCCGGCGCCACCATCTTCGCGCTAAGCT...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPPARHG*SLAPGT
Trigger: TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGG...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCCCCTGGAGGTGGTGCTaGTGCCTTGCTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIPWRWC*CLARVS
Trigger: GCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGG...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTCGGAGCGGGGATCGCTaGGCAGGCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCRSGDR*AGAGWR
Trigger: ACGCCAGCCTGCGCCTGCTCAGCGATCCCCGCTCCG...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCCCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR TCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGCAGGAGAAGCGCTTaGGCCCCGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKGRRSA*APEMEV
Trigger: AACCTCCATCTCCGGGGCTCAAGCGCTTCTCCTGCC...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp CAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QVLSQANENPNWPKLFPDSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGACGCTGCCCAAGGCCTaGAGGACGCCGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVTLPKA*RTPLTT
Trigger: AGTGGTGAGCGGCGTCCTGCAGGCCTTGGGCAGCGT...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCTCTGGTGAACTCGCCTaGCTCCGCCGGTCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPSGELA*LRRSKP
Trigger: GGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTAGGGCCTGCCGCCGCTaGGCCTCTGTTTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVRACRR*ASVSAW
Trigger: CCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTAGAATTCGGAGGGCGTaGCCGCTGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVRIRRA*PLAGPL
Trigger: CAGCGGCCCCGCCAGCGGCCACGCCCTCCGAATTCT...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QVLSQANENPNWPKLFPDRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGA +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPVTGGP*LRGHDG
Trigger: TCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGAC...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVSGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAAGGCAACCCTGGAGGTaGTGCTGGTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRRQPWR*CWCLAR
Trigger: CCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCT...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGGGTCTCCACGCAGCTTaGGTGCGACTTCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LSQANENPNWPKLFPDPPGLHAA*VRLPWI
Trigger: GATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACC...CGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCACTACGTGCACCCCTaGGCGGAGCCTCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRIHYVHP*AEPLPA
Trigger: CGCGGGCAGAGGCTCCGCTCAGGGGTGCACGTAGTG...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GISLPLSCVASLFENQVLSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...AAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGGGGCAGGTCTCGGGGTaGTGTGAGAATTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVGQVSG*CENSEG
Trigger: GCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCC...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCACTGCCGGGCCTCCATaGACGTGGAACTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPTAGPP*TWNSTQ
Trigger: CTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGT...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVSCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCAGCTCTCCGTCCAGCTaGCTGAGGGCCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRISSPSS*LRACRR
Trigger: GCGGCGGCAGGCCCTCAGGCAGCTGGACGGAGAGCT...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGATCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRSTQLG*DFPGSR
Trigger: ACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGA...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATTTAGCGCGAAGATGGTaGCGCCGGAGCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANLARRW*RRSRGL
Trigger: CAGCCCCCGGCTCCGGCGCCACCATCTTCGCGCTAA...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVLSQANENPNWPKLFPDRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTCGCCGGTCGAAGCCCTaGCACGCTGCCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCRRSKP*HAAQGL
Trigger: CAGGCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCG...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCCACACAGAAGTCCTaGAAGATGATGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESPTQKS*KMMSRI
Trigger: GATCCTGGACATCATCTTCCAGGACTTCTGTGTGGG...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTCCACCCACACAGAAGTCCTaGAAGATGATGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: IKGRTGPPFSPIPGPESPPTQKS*KMMSRI
Trigger: GATCCTGGACATCATCTTCCAGGACTTCTGTGTGGG...TGGAGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCGAACGCCCGTCTGGTaGACTCGCCTGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFRTPVW*TRLPPP
Trigger: CGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCG...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCACCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: DNHRRAKENFHVETLLGPPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...TGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGACATGGATTTACAACCTaGGACCCGCCTGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRHGFTT*DPPARP
Trigger: AGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATG...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTTCTGCGAGGCCCACGTaGCGCTTGGGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFSARPT*RLGRQG
Trigger: ACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGA...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTGCTGGTCCGGATCACTaGGATGCCGCAGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVAGPDH*DAAAAL
Trigger: CAAGGCCGCTGCGGCATCGCAGTGATCCGGACCAGC...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTGACGCCGCTCACCACTaGCGGGCCTCCATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCDAAHH*RASMHV
Trigger: CACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTC...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCAGCTGCCTGAGGGCCTaGCGCCGCTGCGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRISCLRA*RRCASV
Trigger: AACAGAGGCGCAGCGGCGGCAGGCCCTCAGGCAGCT...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCCTGAGCGGAGCCTCTaGCCGCGCCTGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGPERSL*PRLASR
Trigger: ACGAGATGCCAGGCGCGGGCAGAGGCTCCGCTCAGG...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCAGAATGAGGTCAGCCTaGTCTAGCCTCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPRMRSA*SSLSRA
Trigger: CGCCCGGGAGAGGCTAGAGCAGGCTGACCTCATTCT...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR GCA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGCCAAGGTCGCACCACTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKPRSHH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAGTGGTGCGACCTTGG...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp AGACACACATTAAGCCATGACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTCGCTGGCGGGGCCGCTaGTCCGGATCACTGCGATGC +
Preference number: 4 (lower is better)
Translates to: RHTLSHDNHRRAKENFHVRWRGR*SGSLRC
Trigger: GCATCGCAGTGATCCGGACCAGCGGCCCCGCCAGCG...AACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTCATGGCTTAATGTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCGAAACTCTGGGGACCTaGGAACCAGAGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIETLGT*EPEHQC
Trigger: GCACTGGTGCTCTGGTTCCCAGGTCCCCAGAGTTTC...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CCA 90 bp GGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTCAGCCACGGCAGAGGTaGCCCAGCTCTCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GISLPLSCVASLFENQVLQPRQR*PSSPSS
Trigger: GCTGGACGGAGAGCTGGGCCACCTCTGCCGTGGCTG...AAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANSGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCACAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASQRLRR*PGSCNW
Trigger: CCAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTG...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000358792.11
CDS-3UTR CCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTGCAGCGGGGGATCTGTaGACGGGTCCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVAAGDL*TGPHTL
Trigger: CAGTGTGTGGGGACCCGTCCACAGATCCCCCGCTGC...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCGCAGCGGGGGATCTGTaGACGGGTCCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQIAAGDL*TGPHTL
Trigger: CAGTGTGTGGGGACCCGTCCACAGATCCCCCGCTGC...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCACACTGCACTCCAGCCTaGGCAATAGACAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASHCTPA*AIDRGG
Trigger: CCCTCCTCTGTCTATTGCCCAGGCTGGAGTGCAGTG...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCGCCTGCCCGACCTaGCTGTGTGGCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQIPACPT*LCGFKS
Trigger: AGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGG...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR GCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCTGGAGGTGGTGCTGGTaGCTTGCTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQIWRWCW*LARVSS
Trigger: GCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCA...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCATCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: DNHRRAKENFHVETLLGPSTQLG*DFPGSR
Trigger: ACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGA...TGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAAGCCCCCGCCACATaGATTTACAACCTGCGACCC +
Preference number: 4 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIKAPAT*IYNLRP
Trigger: GGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTT...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTAGGCGCAGGCTGGCGTaGCGAGCAAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFRRRLA*RARGRS
Trigger: AGACCTGCCCCTTGCTCGCCACGCCAGCCTGCGCCT...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCTCCGGCCAGGTCGACTaGGGTCTCCAGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRISGQVD*GLQHVT
Trigger: CGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGA...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGIPRGS*VSTQLG
Trigger: CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCGCAGTCCTCACCGGTaGAACTCTGGGGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRIRSPHR*NSGDLG
Trigger: TCCCAGGTCCCCAGAGTTTCACCGGTGAGGACTGCG...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATCCAGCATGGCCAGAATaGGGTCAGCCTGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANPAWPE*GQPALA
Trigger: GGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGG...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR TCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCCCCATTCCAGGGCCTaGATCTCCAGGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGPHSRA*ISRESL
Trigger: CAGGGACTCCCTGGAGATTCAGGCCCTGGAATGGGG...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTGAACCAGAGCACCAGTaGGCGGTCCAGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFEPEHQ*AVQRLP
Trigger: GGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTC...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTGCCTCTGCCCGCGCCTaGCATCTCGTAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCASARA*HLVDVH
Trigger: GTGCACATCTACGAGATGCCAGGCGCGGGCAGAGGC...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCACACTGCACTCCAGCCTaGGCAATAGACAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DNHRRAKENFHVETLLGPHCTPA*AIDRGG
Trigger: CCCTCCTCTGTCTATTGCCCAGGCTGGAGTGCAGTG...TGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR TCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCCAGCATGGCCAGAATaGGGTCAGCCTGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGPAWPE*GQPALA
Trigger: GGCTAGAGCAGGCTGACCTCATTCTGGCCATGCTGG...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR TCA 90 bp ACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAGGTAGGCAGATTACCTaGGGTCAAGGAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TNILRSSYLHPNPDAPASGRQIT*GQGVQD
Trigger: GTCTTGAACTCCTTGACCTCAGGTAATCTGCCTACC...TGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATG +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFAPRAT*SARTSM
Trigger: CATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGC...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp TTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTGCAGGTTCACTAGGCTaGTCTTGCCCGCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRIKFFPRRMRIPIGLNCAGSLG*SCPHWG
Trigger: CCCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGC...ACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATCCAAGGTCGCACCACTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANPRSHH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAGTGGTGCGACCTTGG...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp GGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTCCCGGAGATGGAGGTTaGAGTGAGCCAAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: GISLPLSCVASLFENQVLPGDGG*SEPRSH
Trigger: GTGCGACCTTGGCTCACTGCAACCTCCATCTCCGGG...AAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR GCA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATGTACATCCACAAGTATaGAAACATTCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PASRVERDLHSAPFQGLNVHPQV*KHSKFW
Trigger: CCAGAACTTTGAATGTTTGCATACTTGTGGATGTAC...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp CACACATTAAGCCATGACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAATGCCGCAGCGGCCTTaGCCAGAGCTTAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: HTLSHDNHRRAKENFHVEMPQRP*PELSAK
Trigger: CTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCAT...TTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTCATGGCTTAATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp GCAGGGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGISLPLSCVASLFENQVSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...AACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCGCATCCAGGCAACCCTaGAGGTGGTGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRIASRQP*RWCWCL
Trigger: AAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGC...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCGCATCCAGGCAACCCTaGAGGTGGTGCTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGASRQP*RWCWCL
Trigger: AAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGC...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGWVRLP*IPSLAH
Trigger: GTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCA...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATCTGGATCCCGTCACTTaGCCACACAGAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANLDPVT*PHRSPG
Trigger: TCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAG...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCTGGATCCCGTCACTTaGCCACACAGAAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQILDPVT*PHRSPG
Trigger: TCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAG...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCATCCCAACCCGGATaGCCCAGCATCAAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFPSQPG*PSIKGR
Trigger: TCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCTCACCGGTGAAACTCTaGGGACCTGGGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGSPVKL*GPGNQS
Trigger: GCTCTGGTTCCCAGGTCCCCAGAGTTTCACCGGTGA...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCCAGGAAGTTGCAACTaGAGGGAGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGPGSCN*RERPGQ
Trigger: CTGACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGG...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
CDS-3UTR CCA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESNENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp CAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: QVLSQANENPNWPKLFPDQRLRR*PGSCNS
Trigger: AGAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTG...ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600625.5
CDS-3UTR TCA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATAGAAGTCCTGGAAGATaGTGTCCAGGATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLSCVASLFENQVLSQANRSPGR*CPGSPR
Trigger: CCGAGGAGATCCTGGACATCATCTTCCAGGACTTCT...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RIPIGLNCFQIPRGSWVSNENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...GGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR TCA 90 bp CTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCAGAAGTCCTGGAAGATaGTGTCCAGGATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LHYLRIKFFPRRMRIPIGRSPGR*CPGSPR
Trigger: CCGAGGAGATCCTGGACATCATCTTCCAGGACTTCT...GCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTTCTCCAGGGAGTCCCTaGAGGGATCTCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFSPGSP*RDLTTS
Trigger: AGAGGTAGTGAGATCCCTGCAGGGACTCCCTGGAGA...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
3UTR CAA 72 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATC +
Preference number: 4 (lower is better)
Translates to: GSHYLSAVLLHY*RIKFFPRRMRI
Trigger: GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR GCA 90 bp AGACACACATTAAGCCATGACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGTACATCCACAAGTATaGAAACATTCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RHTLSHDNHRRAKENFHVVHPQV*KHSKFW
Trigger: CCAGAACTTTGAATGTTTGCATACTTGTGGATGTAC...AACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTCATGGCTTAATGTGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CCA 90 bp CACACATTAAGCCATGACAACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAAATGAGAATCCCAATTaGCCTAAACTGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: HTLSHDNHRRAKENFHVENENPN*PKLFPD
Trigger: ATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATT...TTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGTTGTCATGGCTTAATGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS GCA 90 bp GTGGCCAGGAAGTTGCAACTCTCCCGGGCGCGCCGCACGCCCTCCTaGTCCACGGGCCCCACGCCCTCCCGCAACCCAGCCGTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: VARKLQLSRARRTPS*STGPTPSRNPAVSL
Trigger: GAGCGACACGGCTGGGTTGCGGGAGGGCGTGGGGCCCGTGGAGCAGGAGGGCGTGCGGCGCGCCCGGGAGAGTTGCAACTTCCTGGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598038.5
ENST00000600625.5
CDS-3UTR CAA 90 bp CCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACAAGGCCCACGTGCCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PGRLGSPARHGWSLAPGTRPTCR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCT...TGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS CCA 90 bp GCCCACGTGCCGCTTGGGCCGCCAGGGTCCAAAGCCCCCGCCACATaGATTTACAACCTGCGACCCGCCTGCCCGACCTGCCTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: AHVPLGPPGSKAPAT*IYNLRPACPTCLCG
Trigger: GCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000596166.5
ENST00000598493.5
ENST00000599429.5
ENST00000600625.5
CDS GCA 90 bp GTGGCCGAGGGCATCCAGGCAACCCTGGAGGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGGATCTGTGGACGGGTCCCCACACAC +
Preference number: 5 (lower is better)
Translates to: VAEGIQATLEVVLVP*SGQQRGICGRVPTH
Trigger: GTGTGTGGGGACCCGTCCACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCCTCGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS-3UTR CAA 90 bp GCACAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCAGGCCCACGTGCCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: AQEIRPGRLGSPARHGWSRPTCR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCT...GGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CAA 90 bp CGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: RPGRLGSPARHGWSLAPGRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...CCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS CCA 90 bp GAGTCATGGGACCTACAGGAGGCTCGGAACCTGGGGACCCTCACCTaGGAACCAGAGCACCAGTGCGCGGTCCAGAGGCTCCCCGGAGCG +
Preference number: 5 (lower is better)
Translates to: ESWDLQEARNLGTLT*EPEHQCAVQRLPGA
Trigger: CGCTCCGGGGAGCCTCTGGACCGCGCACTGGTGCTCTGGTTCCCAGGTGAGGGTCCCCAGGTTCCGAGCCTCCTGTAGGTCCCATGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS-3UTR CAA 90 bp AGGGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: RACRRCASVSAWIRSASPRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...GGGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600610.5
ENST00000602165.1
CDS-3UTR CAA 90 bp GAGGGCCTGCCGCCGCTGCGCCTCTGTTTCCGCGTGGATAAGGTCCGCCAGCCCACCCCCTCCTCCAGGTaGTCATCCTCGCCGAAATCG +
Preference number: 5 (lower is better)
Translates to: EGLPPLRLCFRVDKVRQPTPSSR*SSSPKS
Trigger: CGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGT...GGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCGGCGGCAGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS CCA 90 bp CAGGAAATCCGGCCAGGTCGACTGGGGTCTCCAGCACGTCACGGGTaGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACCTG +
Preference number: 5 (lower is better)
Translates to: QEIRPGRLGSPARHG*SLAPGTRWTQASDL
Trigger: CAGGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596125.1
CDS-3UTR CAA 90 bp ATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCAGGCCCACGTGCCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: IPTRMPQHQGSNGTSIQPRPTCR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCT...GGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CAA 90 bp TCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGCCCTGGCACGCTGCCCAAGGCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SGELACLRRSKPWHAAQGRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...GCCTTGGGCAGCGTGCCAGGGCTTCGACCGGCGGAGGCAGGCGAGTTCACCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600610.5
ENST00000601213.5
ENST00000602165.1
CDS-3UTR CAA 90 bp ACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACACAGGCTTCCGACTGACGTGGGCCAGAGCTTaGGTGAGGGTCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TSRVVPGSGDTMDTGFRLTWARA*VRVSAQ
Trigger: CTGGGCCGAGACCCTCACCAAAGCTCTGGCCCACGT...CAGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CAA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: HPNPDAPASRVERDLHSAGGAGA*LGSAAG
Trigger: CCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACC...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTGGAGA*LGSAAG
Trigger: CCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACC...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp TCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SPEAPGSPRSLGATSLDPGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...GGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS GCA 90 bp TTGGGCCGCCAGGGTCCAAAGCCCCCGCCACATGGATTTACAACCTaGGACCCGCCTGCCCGACCTGCCTGTGTGGCTTCAAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LGRQGPKPPPHGFTT*DPPARPACVASSLG
Trigger: GCCCAGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTTGGACCCTGGCGGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000599429.5
ENST00000600625.5
CDS CCA 90 bp GGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATaGACACAGGCTTCCGACCTGGGGGAGGGTCAGAAGAAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GSPARHGWSLAPGTR*TQASDLGEGQKKRR
Trigger: TCTCCTCTTCTTCTGACCCTCCCCCAGGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596125.1
CDS-3UTR CAA 90 bp TGCCGCAGCGGCCTTGGCCAGAGCTTAGCGCGAAGATGGTGGCGCCGGAGCCGGTGGGGGATGCACAAATaGGATGTTCTGCGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: CRSGLGQSLARRWWRRSRWGMHK*DVLRGP
Trigger: TGGGCCTCGCAGAACATCCAATTTGTGCATCCCCCA...CCGGCTCCGGCGCCACCATCTTCGCGCTAAGCTCTGGCCAAGGCCGCTGCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS GCA 90 bp CTCTGCCCGCGCCTGGCATCTCGTAGATGTGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATGTCGGCTGTGGGTGAGAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LCPRLASRRCAPRAT*SARTSMSAVGERRQ
Trigger: CTGCCTTCTCTCACCCACAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGCACATCTACGAGATGCCAGGCGCGGGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358792.11
ENST00000594703.1
ENST00000598038.5
CDS-3UTR CAA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATAGGCCCACGTGCCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PASRVERDLHSAPFQGLNRPTCR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CAA 90 bp ACGATGGACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCAAGGCCCACGTGCCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: TMDTGFRLSRFTRLLLPARPTCR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCT...TGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTCCATCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594018.5
ENST00000598493.5
ENST00000600610.5
CDS-3UTR CAA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCACGTGGGCCAGAGCTTaGGTGAGGGTCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTTWARA*VRVSAQ
Trigger: CTGGGCCGAGACCCTCACCAAAGCTCTGGCCCACGT...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CTTCCCATTGGCGAACGCCCGTCTGGTGAACTCGCCTGCCTCCGCCGGTCGAAGTACTTCGATGTCGGCTaGCTCCAGGACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPIGERPSGELACLRRSKYFDVG*LQDPLL
Trigger: GAGGAGGGGGTCCTGGAGCAAGCCGACATCGAAGTA...CTTCGACCGGCGGAGGCAGGCGAGTTCACCAGACGGGCGTTCGCCAATGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS-3UTR CAA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTGGAGA*LGSAAG
Trigger: CCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACC...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp ACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTGGCTCCGGGGACACGATGGACTACTTCGATGTCGGTTaGGTGAGGGTCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TGVSSTSRVVPGSGDTMDYFDVG*VRVSAQ
Trigger: CTGGGCCGAGACCCTCACCAAACCGACATCGAAGTA...GTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594018.5
CDS CCA 90 bp AAGGCCTGCAGGACGCCGCTCACCACTGCCGGGCCTCCATGCACGTaGAACTCCACGCAGTCCTCACCGGTGAAACTCTGGGGACCTAAT +
Preference number: 5 (lower is better)
Translates to: KACRTPLTTAGPPCT*NSTQSSPVKLWGPN
Trigger: ATTAGGTCCCCAGAGTTTCACCGGTGAGGACTGCGTGGAGTTCCACGTGCATGGAGGCCCGGCAGTGGTGAGCGGCGTCCTGCAGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599429.5
ENST00000601261.5
CDS-3UTR CAA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp GCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGACCCCCTCCTCCAGGTaGTCATCCTCGCCGAAATCG +
Preference number: 5 (lower is better)
Translates to: APASRVERDLHSAPFQGLTPSSR*SSSPKS
Trigger: CGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGT...CAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp TCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCGACAGCAGGTCCGACTaGTTCAGCACCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SQPGCPSIKGRTGPPFSPDSRSD*FSTRRR
Trigger: CCTCCTCCTGGTGCTGAACAAGTCGGACCTGCTGTC...GGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCAGGCAGGAGAAGCGCTaGAGCCCCGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: PPISIPTRMPQHQGSNGTRQEKR*SPGDGG
Trigger: ACCTCCATCTCCGGGGCTCAAGCGCTTCTCCTGCCT...GGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CAA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATACGGTGGCCAGGAAGTaGCAACTCTCCCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: PASRVERDLHSAPFQGLNTVARK*QLSRAR
Trigger: GCGCGCCCGGGAGAGTTGCAACTTCCTGGCCACCGT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600625.5
CDS-3UTR CAA 90 bp CCCTCCACTTCGGTCAGGTTCAGCTTCCCATTGGCGAACGCCCGTCTGGTGAACCGCGTGCACAATCGCTaGGGCCGCCAGGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PSTSVRFSFPLANARLVNRVHNR*GRQGPK
Trigger: CTTTGGACCCTGGCGGCCCAAGCGATTGTGCACGCG...GTTCACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCTGACCGAAGTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602165.1
CDS GCA 90 bp TGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGTCACTTGCCCACACAGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: CFQIPRGSWVSTQLG*DFPGSRHLPTQKSW
Trigger: CCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CCA 90 bp CCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCACACAGAAGTCCTGGAAGATGATGTC +
Preference number: 5 (lower is better)
Translates to: PPRLLGLHAAWVRLP*IPSLAHTEVLEDDV
Trigger: GACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CCA 90 bp GCGCGTGCACAATCTGGAACCGGAGGGGAGGCGAATCAGCGCACCTaGGAGGCTCAGCCTCAGTGTCAAGTAGACCGAGGGCTCGATGAT +
Preference number: 5 (lower is better)
Translates to: ARAQSGTGGEANQRT*EAQPQCQVDRGLDD
Trigger: ATCATCGAGCCCTCGGTCTACTTGACACTGAGGCTGAGCCTCCCAGGTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTGTGCACGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596001.5
ENST00000596166.5
ENST00000599329.1
ENST00000600610.5
CDS-3UTR CAA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGACGTGGGCCAGAGCTTaGGTGAGGGTCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTTWARA*VRVSAQ
Trigger: CTGGGCCGAGACCCTCACCAAAGCTCTGGCCCACGT...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCACCCCCTCCTCCAGGTaGTCATCCTCGCCGAAATCG +
Preference number: 5 (lower is better)
Translates to: HPNPDAPASRVERDLHSATPSSR*SSSPKS
Trigger: CGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGT...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCTACTTCGATGTCGGCTaGCTCCAGGACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HPNPDAPASRVERDLHSAYFDVG*LQDPLL
Trigger: GAGGAGGGGGTCCTGGAGCAAGCCGACATCGAAGTA...GGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACTACTTCGATGTCGGCTaGCTCCAGGACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDYFDVG*LQDPLL
Trigger: GAGGAGGGGGTCCTGGAGCAAGCCGACATCGAAGTA...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTGCGACGACAGCAGGTCCGACTaGTTCAGCACCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NCFQIPRGSWVSTQLGCDDSRSD*FSTRRR
Trigger: CCTCCTCCTGGTGCTGAACAAGTCGGACCTGCTGTC...GTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp GACACAGGCTTCCGACTGAGCAGGTTCACTAGGCTGCTCTTGCCCGCATTGGGGAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: DTGFRLSRFTRLLLPALGRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...CCCCAATGCGGGCAAGAGCAGCCTAGTGAACCTGCTCAGTCGGAAGCCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594018.5
ENST00000600610.5
CDS-3UTR CAA 90 bp TGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGACCCCCTCCTCCAGGTaGTCATCCTCGCCGAAATCG +
Preference number: 5 (lower is better)
Translates to: WPKLFPDPPRLLGLHAAWTPSSR*SSSPKS
Trigger: CGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGT...CCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCAGGGCCAGGTCTTTaGACTGCTTGTAGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSPGPGL*TACSGR
Trigger: TCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGG...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp GGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGCCAGGGCCAGGTCTTTaGACTGCTTGTAGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: GLNCFQIPRGSWVSTQLGPGPGL*TACSGR
Trigger: TCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGG...CCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCAGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATAGGCAGGAGAAGCGCTaGAGCCCCGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: PASRVERDLHSAPFQGLNRQEKR*SPGDGG
Trigger: ACCTCCATCTCCGGGGCTCAAGCGCTTCTCCTGCCT...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS TCA 90 bp ACAGGAGGACAGCACAGCCAGTGCAAACCCTTGGAAGGGGGAAACTaGGTCATGGGACCTACAGGAGGCTCGGAACCTGGGGACCCTCAC +
Preference number: 5 (lower is better)
Translates to: TGGQHSQCKPLEGGN*VMGPTGGSEPGDPH
Trigger: GTGAGGGTCCCCAGGTTCCGAGCCTCCTGTAGGTCCCATGACTCAGTTTCCCCCTTCCAAGGGTTTGCACTGGCTGTGCTGTCCTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS CCA 90 bp GACAGCACAGCCAGTGCAAACCCTTGGAAGGGGGAAACTGAGTCATaGGACCTACAGGAGGCTCGGAACCTGGGGACCCTCACCTGGGAA +
Preference number: 5 (lower is better)
Translates to: DSTASANPWKGETES*DLQEARNLGTLTWE
Trigger: TTCCCAGGTGAGGGTCCCCAGGTTCCGAGCCTCCTGTAGGTCCCATGACTCAGTTTCCCCCTTCCAAGGGTTTGCACTGGCTGTGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS-3UTR CAA 90 bp GAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: EILLSPSQPGCPSIKGRTPGSRH*PTQKSW
Trigger: CCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGG...CGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATCTGGGTCTCCACGCAGCTaGGGTGCGACTTCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SIKGRTGPPFSPIPGPESGSPRS*GATSLD
Trigger: ATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCC...AGATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS GCA 90 bp CTCCACTGTGGACTTCCTTGGCTCTCTGTCTCTCTGGTCCAGGTCTaGACGCCCATCTCACATTCCAAACAGCGTCTCCAGGGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: LHCGLPWLSVSLVQV*TPISHSKQRLQGPE
Trigger: CTCCGGACCCTGGAGACGCTGTTTGGAATGTGAGATGGGCGTGCAGACCTGGACCAGAGAGACAGAGAGCCAAGGAAGTCCACAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598532.1
CDS CCA 90 bp AGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTaGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: RIPIGLNCFQIPRGS*VSTQLGCDFPGSRH
Trigger: GTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CCA 90 bp GTGAGCCAAGGTCGCACCACTGCAGCAGCTTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCACACAGAAGTCCTGGAAGATGATGTC +
Preference number: 5 (lower is better)
Translates to: VSQGRTTAAAWVRLP*IPSLAHTEVLEDDV
Trigger: GACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCTGCAGTGGTGCGACCTTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS-3UTR CAA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRGGAGA*LGSAAG
Trigger: CCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACC...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS TCA 90 bp GTGTGGCTTCAAGTCTGGGCAGGGGGCCCCGCCCACTCCGCGGCTTaGCTAGTAAAGTGCTCAACTATTCTCGACCACCATTGGGTATCT +
Preference number: 5 (lower is better)
Translates to: VWLQVWAGGPAHSAA*LVKCSTILDHHWVS
Trigger: AGATACCCAATGGTGGTCGAGAATAGTTGAGCACTTTACTAGTCAAGCCGCGGAGTGGGCGGGGCCCCCTGCCCAGACTTGAAGCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS TCA 90 bp CAGTCCTCACCGGTGAAACTCTGGGGACCTAATGTGACAGACAGGTaGCAGGAGGACAGCACAGCCAGTGCAAACCCTTGGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: QSSPVKLWGPNVTDR*QEDSTASANPWKGE
Trigger: TTCCCCCTTCCAAGGGTTTGCACTGGCTGTGCTGTCCTCCTGTCACCTGTCTGTCACATTAGGTCCCCAGAGTTTCACCGGTGAGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS TCA 90 bp TCTCGACCACCATTGGGTATCTTAGGATACGTCCTGCCCACCGTCTaGAGATACTCGCTTCCATTGGCTGGTGCAAGGGAGAGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: SRPPLGILGYVLPTV*RYSLPLAGARESGS
Trigger: GCTCCCGCTCTCCCTTGCACCAGCCAATGGAAGCGAGTATCTTCAGACGGTGGGCAGGACGTATCCTAAGATACCCAATGGTGGTCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS-3UTR CAA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCACCCCCTCCTCCAGGTaGTCATCCTCGCCGAAATCG +
Preference number: 5 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSTPSSR*SSSPKS
Trigger: CGATTTCGGCGAGGATGACAACCTGGAGGAGGGGGT...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCGACAGCAGGTCCGACTaGTTCAGCACCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRMRIPIGLNCFQIPRGSDSRSD*FSTRRR
Trigger: CCTCCTCCTGGTGCTGAACAAGTCGGACCTGCTGTC...GGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AACAAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: NKYTEILLSPSQPGCPSIRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...GATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000600625.5
CDS-3UTR CAA 90 bp AAATATACTGAGATCCTCCTATCTCCATCCCAACCCGGATGCCCCAGCATCAAGTACTTCGATGTCGGCTaGCTCCAGGACCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KYTEILLSPSQPGCPSIKYFDVG*LQDPLL
Trigger: GAGGAGGGGGTCCTGGAGCAAGCCGACATCGAAGTA...CTTGATGCTGGGGCATCCGGGTTGGGATGGAGATAGGAGGATCTCAGTATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CAA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGAGGTTCAGCTTCCCATaGGCGAACGCCCGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVRFSFP*ANARLV
Trigger: CACCAGACGGGCGTTCGCCAATGGGAAGCTGAACCT...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CAA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVPGSRH*PTQKSW
Trigger: CCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGG...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS-3UTR CAA 90 bp CCATCCCAACCCGGATGCCCCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PSQPGCPSIKGRTGPPFSVLLHY*RIKFFP
Trigger: GGGAAAGAACTTGATTCTCAAATAGTGAAGCAACAC...GCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGGGGCATCCGGGTTGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS GCA 90 bp AGGGACGAGTACTGGAGAACCCACGCCCTGATCCAGGGAAAATCTTaGCCGAACTTCTGGAAAGAGTCCTACTTGCTTTTTCCGGAACTC +
Preference number: 5 (lower is better)
Translates to: RDEYWRTHALIQGKS*PNFWKESYLLFPEL
Trigger: GAGTTCCGGAAAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTGGGTTCTCCAGTACTCGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1
CDS-3UTR CAA 90 bp CCCAATTGGCCTAAACTGTTTCCAGATCCCCCGAGGCTCCTGGGTCTCCACGCATACCTCTCAGCTGTGTaGCTTCACTATTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: PNWPKLFPDPPRLLGLHAYLSAV*LHYLRI
Trigger: GATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTA...TGCGTGGAGACCCAGGAGCCTCGGGGGATCTGGAAACAGTTTAGGCCAATTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCAGCATCAAGGGTCGAACGGGACCTCCATTCAGCCCCATTCCAGGGCCTGAATTACCTCTCAGCTGTGTaGCTTCACTATTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: PASRVERDLHSAPFQGLNYLSAV*LHYLRI
Trigger: GATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTA...ATTCAGGCCCTGGAATGGGGCTGAATGGAGGTCCCGTTCGACCCTTGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTACGTGGGCCAGAGCTTaGGTGAGGGTCTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFTWARA*VRVSAQ
Trigger: CTGGGCCGAGACCCTCACCAAAGCTCTGGCCCACGT...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp CCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PLSCVASLFENQVLSQANPGSRH*PTQKSW
Trigger: CCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGG...ATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CCA 90 bp TGGAGAACCCACGCCCTGATCCAGGGAAAATCTTGCCCGAACTTCTaGAAAGAGTCCTACTTGCTTTTTCCGGAACTCTCCAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: WRTHALIQGKSCPNF*KESYLLFPELSRFS
Trigger: AGAGAATCTGGAGAGTTCCGGAAAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTGGGTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1
CDS-3UTR CAA 90 bp GCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCCAGGCGAATGAGAATCGACAGCAGGTCCGACTaGTTCAGCACCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: AVLLHYLRIKFFPRRMRIDSRSD*FSTRRR
Trigger: CCTCCTCCTGGTGCTGAACAAGTCGGACCTGCTGTC...GATTCTCATTCGCCTGGGAAAGAACTTGATTCTCAAATAGTGAAGCAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp AAGTTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCAGGGCCAGGTCTTTaGACTGCTTGTAGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: KFFPRRMRIPIGLNCFQIPGPGL*TACSGR
Trigger: TCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGG...GATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp GGATCTCACTACCTCTCAGCTGTGTTGCTTCACTATTTGAGAATCAAGTTCTTTCCAGGGCCAGGTCTTTaGACTGCTTGTAGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: GSHYLSAVLLHYLRIKFFPGPGL*TACSGR
Trigger: TCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGG...AAAGAACTTGATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTAGTGAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp TTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCCGATACCTCTCAGCTGTGTaGCTTCACTATTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: FPRRMRIPIGLNCFQIPRYLSAV*LHYLRI
Trigger: GATTCTCAAATAGTGAAGCAACACAGCTGAGAGGTA...TCGGGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp TTCTTTCCCAGGCGAATGAGAATCCCAATTGGCCTAAACTGTTTCCAGATCCCCGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: FFPRRMRIPIGLNCFQIPVLLHY*RIKFFP
Trigger: GGGAAAGAACTTGATTCTCAAATAGTGAAGCAACAC...GGGGATCTGGAAACAGTTTAGGCCAATTGGGATTCTCATTCGCCTGGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS-3UTR CAA 90 bp ACCACAGAAGGGCTAAGGAAAATTTCCATGTTGAAACACTTCTGGGGCCAGGTGGTGTTGCTTCACTATTaGAGAATCAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: TTEGLRKISMLKHFWGQVVLLHY*RIKFFP
Trigger: GGGAAAGAACTTGATTCTCAAATAGTGAAGCAACAC...CACCTGGCCCCAGAAGTGTTTCAACATGGAAATTTTCCTTAGCCCTTCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000600625.5
CDS CCA 72 bp CGGCGCGTGCACAATCTGCGAGGCCCACGTGCCGCTTaGGCCGCCAGGGTCCAAAGCCCCCGCCACATGGAT +
Preference number: 6 (lower is better)
Translates to: RRVHNLRGPRAA*AARVQSPRHMD
Trigger: ATCCATGTGGCGGGGGCTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGATTGTGCACGCGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000594018.5
ENST00000598493.5
ENST00000599429.5
ENST00000600625.5
CDS CCA 72 bp TTACAACCTGCGACCCGCCTGCCCGACCTGCCTGTGTaGCTTCAAGTCTGGGCAGGGGGCCCCGCCCACTCC +
Preference number: 6 (lower is better)
Translates to: LQPATRLPDLPV*LQVWAGGPAHS
Trigger: GGAGTGGGCGGGGCCCCCTGCCCAGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599429.5
CDS CCA 72 bp CACTGGGGCTCTGGGCTCCCACAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTCTCCCGGGCGCGCCGCA +
Preference number: 6 (lower is better)
Translates to: HWGSGLPQRLRR*PGSCNSPGRAA
Trigger: TGCGGCGCGCCCGGGAGAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTGTGGGAGCCCAGAGCCCCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598038.5
ENST00000600625.5
CDS CAA 90 bp AGTGGCCGAGGGCATCCAGGCAACCCTGGAGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGGGATCTGTGGACGGGTCCCCACACA +
Preference number: 6 (lower is better)
Translates to: SGRGHPGNPGGGAGA*LGSAAGDLWTGPHT
Trigger: TGTGTGGGGACCCGTCCACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCCTCGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS GCA 72 bp GGCATCCAGGCAACCCTGGAGGTGGTGCTGGTGCCTTaGTCGGGTCAGCAGCGGGGGATCTGTGGACGGGTC +
Preference number: 6 (lower is better)
Translates to: GIQATLEVVLVP*SGQQRGICGRV
Trigger: GACCCGTCCACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS GCA 72 bp CCGAGGGCATCCAGGCAACCCTGGAGGTGGTGCTGGTaGCTTGCTCGGGTCAGCAGCGGGGGATCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: PRASRQPWRWCW*LARVSSGGSVD
Trigger: GTCCACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS CCA 72 bp TGGCCGAGGGCATCCAGGCAACCCTGGAGGTGGTGCTaGTGCCTTGCTCGGGTCAGCAGCGGGGGATCTGTG +
Preference number: 6 (lower is better)
Translates to: WPRASRQPWRWC*CLARVSSGGSV
Trigger: CACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCCTCGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS CCA 72 bp GTCGACTGGGGTCTCCAGCACGTCACGGGTGGTCCCTaGCTCCGGGGACACGATGGACACAGGCTTCCGACC +
Preference number: 6 (lower is better)
Translates to: VDWGLQHVTGGP*LRGHDGHRLPT
Trigger: GGTCGGAAGCCTGTGTCCATCGTGTCCCCGGAGCCAGGGACCACCCGTGACGTGCTGGAGACCCCAGTCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596125.1
CDS CCA 72 bp TCGCTTGGGCCGCCAGGGTCCAAAGCCCCCGCCACATaGATTTACAACCTGCGACCCGCCTGCCCGACCTGC +
Preference number: 6 (lower is better)
Translates to: SLGPPGSKAPAT*IYNLRPACPTC
Trigger: GCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTTGGACCCTGGCGGCCCAAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602165.1
CDS CAA 72 bp GGGCATCCAGGCAACCCTGGAGGTGGTGCTGGTGCCTaGCTCGGGTCAGCAGCGGGGGATCTGTGGACGGGT +
Preference number: 6 (lower is better)
Translates to: GHPGNPGGGAGA*LGSAAGDLWTG
Trigger: ACCCGTCCACAGATCCCCCGCTGCTGACCCGAGCAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS TCA 72 bp CACCCGCAGCGCCTCTGCCGCCAGGGCCAGGTCTTTTaGCTGCTTGTAGTGGCCGAGGGCATCCAGGCAACC +
Preference number: 6 (lower is better)
Translates to: HPQRLCRQGQVF*LLVVAEGIQAT
Trigger: GGTTGCCTGGATGCCCTCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGGCGGCAGAGGCGCTGCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS CCA 72 bp GACCTACAGGAGGCTCGGAACCTGGGGACCCTCACCTaGGAACCAGAGCACCAGTGCGCGGTCCAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: DLQEARNLGTLT*EPEHQCAVQRL
Trigger: GAGCCTCTGGACCGCGCACTGGTGCTCTGGTTCCCAGGTGAGGGTCCCCAGGTTCCGAGCCTCCTGTAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS CAA 72 bp CCACCCGCAGCGCCTCTGCCGCCAGGGCCAGGTCTTTaGACTGCTTGTAGTGGCCGAGGGCATCCAGGCAAC +
Preference number: 6 (lower is better)
Translates to: PPAAPLPPGPGL*TACSGRGHPGN
Trigger: GTTGCCTGGATGCCCTCGGCCACTACAAGCAGTCAAAAGACCTGGCCCTGGCGGCAGAGGCGCTGCGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000598038.5
ENST00000600625.5
CDS GCA 72 bp GCCCCCGCCACATGGATTTACAACCTGCGACCCGCCTaGCCGACCTGCCTGTGTGGCTTCAAGTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: APATWIYNLRPA*PTCLCGFKSGQ
Trigger: CTGCCCAGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGTGGCGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324894.13
ENST00000599429.5
CDS GCA 72 bp ATCCCCCGAGGCTCCTGGGTCTCCACGCAGCTTGGGTaGGACTTCCCTGGATCCCGTCACTTGCCCACACAG +
Preference number: 6 (lower is better)
Translates to: IPRGSWVSTQLG*DFPGSRHLPTQ
Trigger: CTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAGCCTCGGGGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS GCA 72 bp ACATGGATTTACAACCTGCGACCCGCCTGCCCGACCTaGCTGTGTGGCTTCAAGTCTGGGCAGGGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: TWIYNLRPACPT*LCGFKSGQGAP
Trigger: CGGGGCCCCCTGCCCAGACTTGAAGCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599429.5
CDS GCA 72 bp CGGAGCCGGGGGCTGGTGCGCCGCTGCTCCGGCGCGTaGACAATCTCTTTACGTTCAGGTTCAGACCGGAAA +
Preference number: 6 (lower is better)
Translates to: RSRGLVRRCSGA*TISLRSGSDRK
Trigger: TTTCCGGTCTGAACCTGAACGTAAAGAGATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCCCCGGCTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594345.5
CDS CCA 72 bp CACTGGGGCTCTGGGCTCCCACAGAGGCTACGACGGTaGCCAGGAAGTTGCAACTGGAGGGAGAGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: HWGSGLPQRLRR*PGSCNWRERPG
Trigger: ACCTGGCCTCTCCCTCCAGTTGCAACTTCCTGGCCACCGTCGTAGCCTCTGTGGGAGCCCAGAGCCCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000595194.1
ENST00000596125.1
ENST00000602056.1
CDS GCA 72 bp CAGGGTCCAAAGCCCCCGCCACATGGATTTACAACCTaGGACCCGCCTGCCCGACCTGCCTGTGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: QGPKPPPHGFTT*DPPARPACVAS
Trigger: TGAAGCCACACAGGCAGGTCGGGCAGGCGGGTCGCAGGTTGTAAATCCATGTGGCGGGGGCTTTGGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000596166.5
ENST00000598493.5
ENST00000599429.5
ENST00000600625.5
CDS GCA 72 bp CGCCTGGCATCTCGTAGATGTGCACCCAGGGCCACCTaGAGTGCCCGTACTTCGATGTCGGCTGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: RLASRRCAPRAT*SARTSMSAVGE
Trigger: CTCACCCACAGCCGACATCGAAGTACGGGCACTGCAGGTGGCCCTGGGTGCACATCTACGAGATGCCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358792.11
ENST00000594703.1
ENST00000598038.5
CDS GCA 72 bp CGGAGCCGGGGGCTGGTGCGCCGCTGCTCCGGCGCGTaGACAATTTGCTTTTTCCGGAACTCTCCAGATTCT +
Preference number: 6 (lower is better)
Translates to: RSRGLVRRCSGA*TICFFRNSPDS
Trigger: AGAATCTGGAGAGTTCCGGAAAAAGCAAATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCCCCGGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596941.5
ENST00000600995.5
CDS GCA 72 bp GCCCACCGTCTGAAGATACTCGCTTCCATTGGCTGGTaGAAGGGAGAGCGGGAGCGGGAGGCGGTATGGAGG +
Preference number: 6 (lower is better)
Translates to: AHRLKILASIGW*KGEREREAVWR
Trigger: CCTCCATACCGCCTCCCGCTCCCGCTCTCCCTTGCACCAGCCAATGGAAGCGAGTATCTTCAGACGGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CCA 72 bp CCTGCCCACCGTCTGAAGATACTCGCTTCCATTGGCTaGTGCAAGGGAGAGCGGGAGCGGGAGGCGGTATGG +
Preference number: 6 (lower is better)
Translates to: PAHRLKILASIG*CKGEREREAVW
Trigger: CCATACCGCCTCCCGCTCCCGCTCTCCCTTGCACCAGCCAATGGAAGCGAGTATCTTCAGACGGTGGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CCA 72 bp CACAAATTGGATGTTCTGCGAGGCCCACGTGCCGCTTaGGCCGCCAGGGTCCAAAGCCCCCGCCACATGGAT +
Preference number: 6 (lower is better)
Translates to: HKLDVLRGPRAA*AARVQSPRHMD
Trigger: ATCCATGTGGCGGGGGCTTTGGACCCTGGCGGCCCAAGCGGCACGTGGGCCTCGCAGAACATCCAATTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600610.5
CDS CAA 90 bp CCTGCGGGAGCAAGGTCAACTGAGCGGGGATCCCAGGTTGAGCAATaGAAGGCACTGGGTGGAGGGACAGTTAGAGGGGCCAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PAGARSTERGSQVEQ*KALGGGTVRGARQS
Trigger: GCTCTGCCTGGCCCCTCTAACTGTCCCTCCACCCAGTGCCTTCAATTGCTCAACCTGGGATCCCCGCTCAGTTGACCTTGCTCCCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595194.1
CDS TCA 72 bp GCGTCTCCAGGGTCCGGAGTTTGCAGATGGGGAAACTaGGGCTCCGAGGCGGGGACCAGAAGAAAGCATGGG +
Preference number: 6 (lower is better)
Translates to: ASPGSGVCRWGN*GSEAGTRRKHG
Trigger: CCCATGCTTTCTTCTGGTCCCCGCCTCGGAGCCTCAGTTTCCCCATCTGCAAACTCCGGACCCTGGAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361619.9
ENST00000598532.1
ENST00000601213.5
CDS GCA 72 bp GGGCTGGTGCGCCGCTGCTCCGGCGCGTGCACAATTTaGTTTTTCCGGAACTCTCCAGATTCTCTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: GLVRRCSGACTI*FFRNSPDSLPS
Trigger: GGAGGGGAGAGAATCTGGAGAGTTCCGGAAAAAGCAAATTGTGCACGCGCCGGAGCAGCGGCGCACCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596941.5
ENST00000600995.5
CDS GCA 72 bp GGAGATGGAGGTTGCAGTGAGCCAAGGTCGCACCACTaGAGCAGCTTGGGTGCGACTTCCCTGGATCCCGTC +
Preference number: 6 (lower is better)
Translates to: GDGGCSEPRSHH*SSLGATSLDPV
Trigger: GACGGGATCCAGGGAAGTCGCACCCAAGCTGCTGCAGTGGTGCGACCTTGGCTCACTGCAACCTCCATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CCA 72 bp CAATCTGGAACCGGAGGGGAGGCGAATCAGCGCACCTaGGAGGCTCAGCCTCAGTGTCAAGTAGACCGAGGG +
Preference number: 6 (lower is better)
Translates to: QSGTGGEANQRT*EAQPQCQVDRG
Trigger: CCCTCGGTCTACTTGACACTGAGGCTGAGCCTCCCAGGTGCGCTGATTCGCCTCCCCTCCGGTTCCAGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596001.5
ENST00000596166.5
ENST00000599329.1
ENST00000600610.5
CDS CAA 90 bp CAGAGGTGGTGTGTGCACCCAGAAACCCACCTTCCCACACCCAATTaGTCCAGCCCGACTTCAGGGGCCAGAATGGCGGCTCATAGGCCG +
Preference number: 6 (lower is better)
Translates to: QRWCVHPETHLPTPN*SSPTSGARMAAHRP
Trigger: CGGCCTATGAGCCGCCATTCTGGCCCCTGAAGTCGGGCTGGACAAATTGGGTGTGGGAAGGTGGGTTTCTGGGTGCACACACCACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594703.1
ENST00000602056.1
CDS CCA 72 bp CTCCTGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCACACAGAAGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LLGLHAAWVRLP*IPSLAHTEVLE
Trigger: TTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CCA 72 bp AAACTGAGTCATGGGACCTACAGGAGGCTCGGAACCTaGGGACCCTCACCTGGGAACCAGAGCACCAGTGCG +
Preference number: 6 (lower is better)
Translates to: KLSHGTYRRLGT*GPSPGNQSTSA
Trigger: CGCACTGGTGCTCTGGTTCCCAGGTGAGGGTCCCCAGGTTCCGAGCCTCCTGTAGGTCCCATGACTCAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS CCA 72 bp GGTCGCACCACTGCAGCAGCTTGGGTGCGACTTCCCTaGATCCCGTCACTTGCCCACACAGAAGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: GRTTAAAWVRLP*IPSLAHTEVLE
Trigger: TTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCTGCAGTGGTGCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS TCA 72 bp CAGCACAGCCAGTGCAAACCCTTGGAAGGGGGAAACTaGGTCATGGGACCTACAGGAGGCTCGGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: QHSQCKPLEGGN*VMGPTGGSEPG
Trigger: CCCAGGTTCCGAGCCTCCTGTAGGTCCCATGACTCAGTTTCCCCCTTCCAAGGGTTTGCACTGGCTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS TCA 72 bp CAAGTCTGGGCAGGGGGCCCCGCCCACTCCGCGGCTTaGCTAGTAAAGTGCTCAACTATTCTCGACCACCAT +
Preference number: 6 (lower is better)
Translates to: QVWAGGPAHSAA*LVKCSTILDHH
Trigger: ATGGTGGTCGAGAATAGTTGAGCACTTTACTAGTCAAGCCGCGGAGTGGGCGGGGCCCCCTGCCCAGACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CCA 72 bp CACCCAATTTGTCCAGCCCGACTTCAGGGGCCAGAATaGCGGCTCATAGGCCGGAAGCTTTCACGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: HPICPARLQGPE*RLIGRKLSRRE
Trigger: TTCCCTGCGTGAAAGCTTCCGGCCTATGAGCCGCCATTCTGGCCCCTGAAGTCGGGCTGGACAAATTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594703.1
ENST00000602056.1
CDS CAA 72 bp TGTGTGCACCCAGAAACCCACCTTCCCACACCCAATTaGTCCAGCCCGACTTCAGGGGCCAGAATGGCGGCT +
Preference number: 6 (lower is better)
Translates to: CVHPETHLPTPN*SSPTSGARMAA
Trigger: AGCCGCCATTCTGGCCCCTGAAGTCGGGCTGGACAAATTGGGTGTGGGAAGGTGGGTTTCTGGGTGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594703.1
ENST00000602056.1
CDS CAA 72 bp TCAAGTCTGGGCAGGGGGCCCCGCCCACTCCGCGGCTaGACTAGTAAAGTGCTCAACTATTCTCGACCACCA +
Preference number: 6 (lower is better)
Translates to: SSLGRGPRPLRG*TSKVLNYSRPP
Trigger: TGGTGGTCGAGAATAGTTGAGCACTTTACTAGTCAAGCCGCGGAGTGGGCGGGGCCCCCTGCCCAGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CAA 90 bp TGGGTCTCCACGCAGCTTGGGTGCGACTTCCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGGAAGATGATGTCCAGGATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: WVSTQLGCDFPGSRH*PTQKSWKMMSRISS
Trigger: CGAGGAGATCCTGGACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGTGGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CAA 90 bp GCACCACTGCAGCAGCTTGGGTGCGACTTCCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGGAAGATGATGTCCAGGATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: APLQQLGCDFPGSRH*PTQKSWKMMSRISS
Trigger: CGAGGAGATCCTGGACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCTGCAGTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CAA 90 bp TGTGTGGCTTCAAGTCTGGGCAGGGGGCCCCGCCCACTCCGCGGCTaGACTAGTAAAGTGCTCAACTATTCTCGACCACCATTGGGTATC +
Preference number: 6 (lower is better)
Translates to: CVASSLGRGPRPLRG*TSKVLNYSRPPLGI
Trigger: GATACCCAATGGTGGTCGAGAATAGTTGAGCACTTTACTAGTCAAGCCGCGGAGTGGGCGGGGCCCCCTGCCCAGACTTGAAGCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS GCA 72 bp CCCAGCGTTCCCTTCTGCCGTTCCCTCGGCTTCGGATaGCCTTCCTCATTTGACAAACTCGTCTTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: PSVPFCRSLGFG*PSSFDKLVFKA
Trigger: GGCCTTGAAGACGAGTTTGTCAAATGAGGAAGGGCATCCGAAGCCGAGGGAACGGCAGAAGGGAACGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596941.5
ENST00000598038.5
ENST00000598532.1
ENST00000600995.5
CDS CAA 72 bp ACGCAGCTTGGGTGCGACTTCCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGGAAGATGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TQLGCDFPGSRH*PTQKSWKMMSR
Trigger: CCTGGACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324894.13
ENST00000358792.11
ENST00000361619.9
ENST00000600625.5
CDS CAA 72 bp AGGCCGGAAGCTTTCACGCAGGGAATGAATGCGGGATaGAGAGGGGGTCTCATGCAGGGGTTGCACAGATGG +
Preference number: 6 (lower is better)
Translates to: RPEAFTQGMNAG*RGGLMQGLHRW
Trigger: CCATCTGTGCAACCCCTGCATGAGACCCCCTCTCAATCCCGCATTCATTCCCTGCGTGAAAGCTTCCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594703.1
ENST00000602056.1
CDS CAA 72 bp CAGCAGCTTGGGTGCGACTTCCCTGGATCCCGTCACTaGCCCACACAGAAGTCCTGGAAGATGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QQLGCDFPGSRH*PTQKSWKMMSR
Trigger: CCTGGACATCATCTTCCAGGACTTCTGTGTGGGCAAGTGACGGGATCCAGGGAAGTCGCACCCAAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS TCA 72 bp CCGGTGAAACTCTGGGGACCTAATGTGACAGACAGGTaGCAGGAGGACAGCACAGCCAGTGCAAACCCTTGG +
Preference number: 6 (lower is better)
Translates to: PVKLWGPNVTDR*QEDSTASANPW
Trigger: CCAAGGGTTTGCACTGGCTGTGCTGTCCTCCTGTCACCTGTCTGTCACATTAGGTCCCCAGAGTTTCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599329.1
ENST00000599429.5
ENST00000601261.5
CDS TCA 72 bp GGTTCTGCGGCTGGGGGATGCACAAATTGGATGTTCTaGAGGCCGAAGGGTGACCGGATTAGGGACTGTGAG +
Preference number: 6 (lower is better)
Translates to: GSAAGGCTNWMF*RPKGDRIRDCE
Trigger: CTCACAGTCCCTAATCCGGTCACCCTTCGGCCTTCAGAACATCCAATTTGTGCATCCCCCAGCCGCAGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596001.5
CDS GCA 72 bp GGACTTCCTTGGCTCTCTGTCTCTCTGGTCCAGGTCTaGACGCCCATCTCACATTCCAAACAGCGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GLPWLSVSLVQV*TPISHSKQRLQ
Trigger: CTGGAGACGCTGTTTGGAATGTGAGATGGGCGTGCAGACCTGGACCAGAGAGACAGAGAGCCAAGGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598532.1
CDS CCA 72 bp AAACTGAGGCTCCGAGGCGGGGACCAGAAGAAAGCATaGGTGGGGACAAGTTGGAGAATGCACCATCAGTGC +
Preference number: 6 (lower is better)
Translates to: KLRLRGGDQKKA*VGTSWRMHHQC
Trigger: GCACTGATGGTGCATTCTCCAACTTGTCCCCACCCATGCTTTCTTCTGGTCCCCGCCTCGGAGCCTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361619.9
CDS CAA 72 bp CCCAGATATGGGCTCTGCCGCAAGGGTCATGAACGATaGAGGCACGGAAGAACGCGAATGATTGCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: PRYGLCRKGHER*RHGRTRMIALP
Trigger: CGGCAGAGCAATCATTCGCGTTCTTCCGTGCCTCAATCGTTCATGACCCTTGCGGCAGAGCCCATATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596001.5
CDS CAA 72 bp GGCACAGGGCAGTGCAAATTACAGCGAGGGGAGGTTTaGAGTCCCGCATTTTCCATCTGCTCACTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: GTGQCKLQRGEV*SPAFSICSLRS
Trigger: GCTGCGGAGTGAGCAGATGGAAAATGCGGGACTCAAAACCTCCCCTCGCTGTAATTTGCACTGCCCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595381.1
ENST00000598038.5
CDS CAA 90 bp AGAAGGAGACCCAGATATGGGCTCTGCCGCAAGGGTCATGAACGATaGAGGCACGGAAGAACGCGAATGATTGCTCTGCCGCAGGGAATT +
Preference number: 6 (lower is better)
Translates to: RRRPRYGLCRKGHER*RHGRTRMIALPQGI
Trigger: AATTCCCTGCGGCAGAGCAATCATTCGCGTTCTTCCGTGCCTCAATCGTTCATGACCCTTGCGGCAGAGCCCATATCTGGGTCTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596001.5
CDS CAA 90 bp ACAGAGTTTGGCACAGGGCAGTGCAAATTACAGCGAGGGGAGGTTTaGAGTCCCGCATTTTCCATCTGCTCACTCCGCAGCCTTAGGCGT +
Preference number: 6 (lower is better)
Translates to: TEFGTGQCKLQRGEV*SPAFSICSLRSLRR
Trigger: ACGCCTAAGGCTGCGGAGTGAGCAGATGGAAAATGCGGGACTCAAAACCTCCCCTCGCTGTAATTTGCACTGCCCTGTGCCAAACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595381.1
ENST00000598038.5
CDS TCA 72 bp AAGGAGACCCAGATATGGGCTCTGCCGCAAGGGTCATaGACGATTGAGGCACGGAAGAACGCGAATGATTGC +
Preference number: 6 (lower is better)
Translates to: KETQIWALPQGS*TIEARKNANDC
Trigger: GCAATCATTCGCGTTCTTCCGTGCCTCAATCGTTCATGACCCTTGCGGCAGAGCCCATATCTGGGTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596001.5
CDS TCA 72 bp CCATTGGGTATCTTAGGATACGTCCTGCCCACCGTCTaGAGATACTCGCTTCCATTGGCTGGTGCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: PLGILGYVLPTV*RYSLPLAGARE
Trigger: CTCCCTTGCACCAGCCAATGGAAGCGAGTATCTTCAGACGGTGGGCAGGACGTATCCTAAGATACCCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS GCA 72 bp GGAATGGAAGAAAGGACAGAGTTTGGCACAGGGCAGTaGAAATTACAGCGAGGGGAGGTTTTGAGTCCCGCA +
Preference number: 6 (lower is better)
Translates to: GMEERTEFGTGQ*KLQRGEVLSPA
Trigger: TGCGGGACTCAAAACCTCCCCTCGCTGTAATTTGCACTGCCCTGTGCCAAACTCTGTCCTTTCTTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595381.1
ENST00000598038.5
CDS CAA 72 bp AGCGGGAGGCGGTATGGAGGTAGGTGTAGCGAAATGTaGTTCCCCGGGCAACATGAGACCAAATTTTTAGGG +
Preference number: 6 (lower is better)
Translates to: SGRRYGGRCSEM*FPGQHETKFLG
Trigger: CCCTAAAAATTTGGTCTCATGTTGCCCGGGGAACAACATTTCGCTACACCTACCTCCATACCGCCTCCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598038.5
CDS CAA 90 bp GAGGGACGAGTACTGGAGAACCCACGCCCTGATCCAGGGAAAATCTaGCCCGAACTTCTGGAAAGAGTCCTACTTGCTTTTTCCGGAACT +
Preference number: 6 (lower is better)
Translates to: EGRVLENPRPDPGKI*PELLERVLLAFSGT
Trigger: AGTTCCGGAAAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTGGGTTCTCCAGTACTCGTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1
CDS CCA 72 bp CACGCCCTGATCCAGGGAAAATCTTGCCCGAACTTCTaGAAAGAGTCCTACTTGCTTTTTCCGGAACTCTCC +
Preference number: 6 (lower is better)
Translates to: HALIQGKSCPNF*KESYLLFPELS
Trigger: GGAGAGTTCCGGAAAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1
CDS CAA 72 bp GTACTGGAGAACCCACGCCCTGATCCAGGGAAAATCTaGCCCGAACTTCTGGAAAGAGTCCTACTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: VLENPRPDPGKI*PELLERVLLAF
Trigger: AAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTGGGTTCTCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1
CDS GCA 72 bp TACTGGAGAACCCACGCCCTGATCCAGGGAAAATCTTaGCCGAACTTCTGGAAAGAGTCCTACTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: YWRTHALIQGKS*PNFWKESYLLF
Trigger: AAAAAGCAAGTAGGACTCTTTCCAGAAGTTCGGGCAAGATTTTCCCTGGATCAGGGCGTGGGTTCTCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594345.5
ENST00000595381.1
ENST00000595951.1
ENST00000596218.5
ENST00000598038.5
ENST00000598532.1