RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTPBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172432

Ensembl transcript IDs: ENST00000307114.11, ENST00000307126.10, ENST00000419497.5, ENST00000432918.5, ENST00000442748.5, ENST00000452781.1, ENST00000459959.1, ENST00000476510.5, ENST00000480263.1, ENST00000496137.5

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGCAGTTTGTCCTGCAGCAAATAAGTGGTCACTCCCCTGGCCAGTaGCTTCTGTCCCATTCTCTGCCAGCCGTGGCTCTCCACCCTCCA +
Preference number: 1 (lower is better)
Translates to: PQFVLQQISGHSPGQ*LLSHSLPAVALHPP
Trigger: TGGAGGGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTGACCACTTATTTGCTGCAGGACAAACTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR GCA 90 bp CCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTCCCTCAGGACTGCCCTTTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: PGLMSQPGEHTASEH*PESCLLPQDCPFLA
Trigger: GGCCAGGAAAGGGCAGTCCTGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR GCA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCA +
Preference number: 1 (lower is better)
Translates to: SGLSTGWQHYHSLSL*HFFRLWAATTTRWP
Trigger: TGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CCA 90 bp CCACTGCCTTCTCGCCTGTCCGCAGTTTGTCCTGCAGCAAATAAGTaGTCACTCCCCTGGCCAGTGCCTTCTGTCCCATTCTCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: PLPSRLSAVCPAANK*SLPWPVPSVPFSAS
Trigger: GCTGGCAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTGACCACTTATTTGCTGCAGGACAAACTGCGGACAGGCGAGAAGGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CCA 90 bp GACACCCTCCCGGAACAGCAGTTTGGCGCCCACCTTCAGGTACTCTaGGTGTTTCAGGAAGCGGAAACGTACCACTGCCTTCTCGCCTGT +
Preference number: 1 (lower is better)
Translates to: DTLPEQQFGAHLQVL*VFQEAETYHCLLAC
Trigger: ACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CCA 90 bp ACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTaGTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: TAEEKDQTDGHAAGL*YMPSLCLVAPRLGQ
Trigger: CTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CCA 90 bp TTGGCCTGGGCTTCTCCTGCTGTAATGGCTTGTACATCAGTGACATaGCCGATGCCCTTGGTGACACCCTCCCGGAACAGCAGTTTGGCG +
Preference number: 1 (lower is better)
Translates to: LAWASPAVMACTSVT*PMPLVTPSRNSSLA
Trigger: CGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR GCA 90 bp CCCTGCCTGAAGGGTTCAGAAGCCCATGTTGGCCTGGGCTTCTCCTaGTGTAATGGCTTGTACATCAGTGACATGGCCGATGCCCTTGGT +
Preference number: 1 (lower is better)
Translates to: PCLKGSEAHVGLGFS*CNGLYISDMADALG
Trigger: ACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGAACCCTTCAGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR GCA 90 bp CACCTTCAGGTACTCTGGGTGTTTCAGGAAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAGTTTGTCCTGCAGCAAATAAGTGGT +
Preference number: 1 (lower is better)
Translates to: HLQVLWVFQEAETYH*LLACPQFVLQQISG
Trigger: ACCACTTATTTGCTGCAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR TCA 90 bp ATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: IQHESQHDRRGKRPD*WACSWPLVYAKPLL
Trigger: AAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR TCA 90 bp AGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCCTGCCTaGAGGGTTCAGAAGCCCATGTTGGCCTGGGCTTCTCCTGCTGTA +
Preference number: 1 (lower is better)
Translates to: SHLIYCRDSNRTVPA*RVQKPMLAWASPAV
Trigger: TACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATaGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTG +
Preference number: 1 (lower is better)
Translates to: LPSLLTHRAANGRAA*PEVTLYIVGTAIEL
Trigger: CAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR CCA 90 bp ATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATaGGAACCCAGGACACTAACAAAGGGAAAGGAGAGTCCATGCCTA +
Preference number: 1 (lower is better)
Translates to: IYMHRETLANKSLSP*EPRTLTKGKESPCL
Trigger: TAGGCATGGACTCTCCTTTCCCTTTGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGGGCCGATGCCCTTGGTaGCACCCTCCCGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKGRCPW*HPPGTA
Trigger: TGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCC...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR GCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGCACTCCCCTGGCCAGTaGCTTCTGTCCCATTCTCTG +
Preference number: 2 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKHSPGQ*LLSHSL
Trigger: CAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTG...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CAA 90 bp GTGACATGGCCGATGCCCTTGGTGACACCCTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTACTCTGGGTGTTTCAGGAAGCGGAAA +
Preference number: 2 (lower is better)
Translates to: VTWPMPLVTPSRNSS*APTFRYSGCFRKRK
Trigger: TTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAACACAGAGCCGCCAATaGCAGGGCAGCATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGTQSRQ*QGSMAR
Trigger: TCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGT...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR CAA 90 bp TCTCCTGCTGTAATGGCTTGTACATCAGTGACATGGCCGATGCCCTaGGTGACACCCTCCCGGAACAGCAGTTTGGCGCCCACCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SPAVMACTSVTWPMP*VTPSRNSSLAPTFR
Trigger: CCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CAA 90 bp GGTTCAGAAGCCCATGTTGGCCTGGGCTTCTCCTGCTGTAATGGCTaGTACATCAGTGACATGGCCGATGCCCTTGGTGACACCCTCCCG +
Preference number: 2 (lower is better)
Translates to: GSEAHVGLGFSCCNG*YISDMADALGDTLP
Trigger: CGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR TCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCGATGAGCCAACCAGGTaGGCACACAGCTTCGGAGCA +
Preference number: 2 (lower is better)
Translates to: SQPGEHTASEHCPESCLLDEPTR*AHSFGA
Trigger: TGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATC...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCCTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 2 (lower is better)
Translates to: RLWAATTTRWPRADNLLSLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR GCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATGATGGGGAACTCAGATaGCACCAGTCTGGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDDGELR*HQSGKV
Trigger: TACTTTCCCAGACTGGTGGCATCTGAGTTCCCCATC...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTACACAGAGCCGCCAATaGCAGGGCAGCATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLTQSRQ*QGSMAR
Trigger: TCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGT...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: RLWAATTTRWPRADNLLSRTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTATTCTCTGCCAGCCGTaGCTCTCCACCCTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLILCQP*LSTLQR
Trigger: CCTCTGGAGGGTGGAGAGCCACGGCTGGCAGAGAAT...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACAAAGTGGTCACTCCCCTaGCCAGTGCCTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTKWSLP*PVPSVP
Trigger: TGGGACAGAAGGCACTGGCCAGGGGAGTGACCACTT...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTCCTGCAGCAAATAAGTaGTCACTCCCCTGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCPAANK*SLPWPV
Trigger: CACTGGCCAGGGGAGTGACCACTTATTTGCTGCAGG...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR TCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACATTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR GCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 2 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR GCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SQPGEHTASEHCPESCLLTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCGGCCTGGGCTTCTCCTaGTGTAATGGCTTGTACATC +
Preference number: 2 (lower is better)
Translates to: SQPGEHTASEHCPESCLLGLGFS*CNGLYI
Trigger: GATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCC...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCCATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 2 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGTTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR TCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTGATGAGCCAACCAGGTaGGCACACAGCTTCGGAGCA +
Preference number: 2 (lower is better)
Translates to: KTRLMGMQLAFGICQAFADEPTR*AHSFGA
Trigger: TGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATC...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAATTGGCAGGGAGCAAGTaGCAGACAGCACCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQLAGSK*QTAPLS
Trigger: AGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAA...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCTGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: SQPGEHTASEHCPESCLLWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTCGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCRRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 2 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTTGGGGAAATGGCCCTTaGGTGAAGGAAAGGGAGATA +
Preference number: 2 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFWGNGP*VKEREI
Trigger: TATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCA...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp TATATTGTAGGGACAGCAATAGAACTGTCCCTGCCTGAAGGGTTCAGAAGCCCAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 2 (lower is better)
Translates to: YIVGTAIELSLPEGFRSPAETYH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGC...TGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FPGHTKFGTSPESWQGASTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: KTRLMGMQLAFGICQAFARTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTGCCACCACCACCAGATaGCCAAGAGCAGATAACCTT +
Preference number: 2 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLATTTR*PRADNL
Trigger: AAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGC...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGRRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGATGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 2 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRCCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGG +
Preference number: 2 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWHSLSL*HFFRLW
Trigger: CCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATG...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: KTRLMGMQLAFGICQAFAWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR GCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTTTCTGTCCCATTCTCTaGCAGCCGTGGCTCTCCACC +
Preference number: 2 (lower is better)
Translates to: ATYMALRRGIEKGVLLRAFCPIL*QPWLST
Trigger: GGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAA...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGACCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTACT +
Preference number: 2 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGPGTAV*RPPSGT
Trigger: AGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR TCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGATTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR GCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCTATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRYMPSL*LVAPRL
Trigger: CAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATA...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR GCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 2 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAGATGCCACCAGTCTaGGAAAGTAAAACATTTGAT +
Preference number: 2 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICQMPPV*ESKTFD
Trigger: ATCAAATGTTTTACTTTCCCAGACTGGTGGCATCTG...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp TTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCTCGCCAGGGCACAGAAGTaGGCTCCTTACTATTCTGAC +
Preference number: 2 (lower is better)
Translates to: FLGWALQFTYQLLFTFCLARAQK*APYYSD
Trigger: GTCAGAATAGTAAGGAGCCCACTTCTGTGCCCTGGC...GAGACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
3UTR-3UTR TCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTTGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 2 (lower is better)
Translates to: ATYMALRRGIEKGVLLRACCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp TTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCTCGGCTCCTTACTATTCTaGCCACTAGCAAGTGGCCAA +
Preference number: 2 (lower is better)
Translates to: FLGWALQFTYQLLFTFCLGSLLF*PLASGQ
Trigger: TTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCC...GAGACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
3UTR-3UTR GCA 90 bp AGTCCATGCCTAAAGAGTAGGAAATATGGCAACATCTTTCCCTTTCCTCCTGGTCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 2 (lower is better)
Translates to: SPCLKSRKYGNIFPFPPGHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...ACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACTCTTTAGGCATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAATGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CCA 90 bp AGTCCATGCCTAAAGAGTAGGAAATATGGCAACATCTTTCCCTTTCCTCCTGGTAAATCCCTGAGTCCATaGGAACCCAGGACACTAACA +
Preference number: 2 (lower is better)
Translates to: SPCLKSRKYGNIFPFPPGKSLSP*EPRTLT
Trigger: TGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTT...ACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACTCTTTAGGCATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR TCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: IYIYMHRETLANKSLSPWGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CCA 90 bp TTTTCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTCTGACCACTAGCAAGTaGCCAACTCTTCAAATACAG +
Preference number: 2 (lower is better)
Translates to: FSFFIPGVGFAIYISAALLTTSK*PTLQIQ
Trigger: CTGTATTTGAAGAGTTGGCCACTTGCTAGTGGTCAG...AAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
3UTR GCA 72 bp ATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTCCCTCAGGACTGCCCT +
Preference number: 3 (lower is better)
Translates to: MSQPGEHTASEH*PESCLLPQDCP
Trigger: AGGGCAGTCCTGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR GCA 72 bp AGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGGGCCGCCACCACCACC +
Preference number: 3 (lower is better)
Translates to: STGWQHYHSLSL*HFFRLWAATTT
Trigger: GGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR GCA 72 bp GGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTGGGCCAGCACAACAAA +
Preference number: 3 (lower is better)
Translates to: GHAAGLWYMPSL*LVAPRLGQHNK
Trigger: TTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CAA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCAGACAGGCCACAGGGTaGCCAGGTTTGATGAGCCAA +
Preference number: 3 (lower is better)
Translates to: RLWAATTTRWPRADNLLSRQATG*PGLMSQ
Trigger: TTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCT...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CAA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATGAAAAAGGAGTGCTTTaGAGGGCTACCCCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDEKGVL*RATPCC
Trigger: ACAACAGGGGGTAGCCCTCAAAAGCACTCCTTTTTC...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CCA 72 bp GCAGTTTGTCCTGCAGCAAATAAGTGGTCACTCCCCTaGCCAGTGCCTTCTGTCCCATTCTCTGCCAGCCGT +
Preference number: 3 (lower is better)
Translates to: AVCPAANKWSLP*PVPSVPFSASR
Trigger: ACGGCTGGCAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTGACCACTTATTTGCTGCAGGACAAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CCA 72 bp GCTTCTCCTGCTGTAATGGCTTGTACATCAGTGACATaGCCGATGCCCTTGGTGACACCCTCCCGGAACAGC +
Preference number: 3 (lower is better)
Translates to: ASPAVMACTSVT*PMPLVTPSRNS
Trigger: GCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CAA 90 bp AAGCCCATGTTGGCCTGGGCTTCTCCTGCTGTAATGGCTTGTACATCAGTGACATCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAC +
Preference number: 3 (lower is better)
Translates to: KPMLAWASPAVMACTSVTSRNSS*APTFRY
Trigger: GTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...TGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR GCA 72 bp GTACTCTGGGTGTTTCAGGAAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAGTTTGTCCTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: VLWVFQEAETYH*LLACPQFVLQQ
Trigger: TTGCTGCAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CCA 72 bp CATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATaGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGG +
Preference number: 3 (lower is better)
Translates to: HFFRLWAATTTR*PRADNLLSTAR
Trigger: CCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CAA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGTGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CCA 72 bp CTGAATCCTGTCTTCTCCCTCAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTG +
Preference number: 3 (lower is better)
Translates to: LNPVFSLRTALS*PHQVWHLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAGACAGGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CAA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGCTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CAA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCACATGGCCGATGCCCTaGGTGACACCCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRTWPMP*VTPSRN
Trigger: GTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGT...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR-3UTR CAA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATCTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
3UTR-3UTR CAA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQISGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR TCA 72 bp CTCTGCCAGGGCACAGAAGTGGGCTCCTTACTATTCTaGCCACTAGCAAGTGGCCAACTCTTCAAATACAGG +
Preference number: 3 (lower is better)
Translates to: LCQGTEVGSLLF*PLASGQLFKYR
Trigger: CCTGTATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTGCCCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
3UTR-3UTR CAA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: ATYMALRRGIEKGVLLRATGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CAA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCGAAAAAGGAGTGCTTTaGAGGGCTACCCCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: HQSGKVKHLIQHESQHDREKGVL*RATPCC
Trigger: ACAACAGGGGGTAGCCCTCAAAAGCACTCCTTTTTC...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR-3UTR CAA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: IYIYMHRETLANKSLSPWSGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAGGCAGCCAGGCTGCTTaGGGACCCGCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIGSQAA*GPAPAG
Trigger: GCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCC...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGTGGCGGAAAAGGTTaGGCCGAGCCCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLAGGGKG*AEPGPA
Trigger: GGCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCACC...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGGCAGCCAGGCTGCTTaGGGACCCGCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCGSQAA*GPAPAG
Trigger: GCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCC...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGGGTGGCGGAAAAGGTTaGGCCGAGCCCGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLGGGKG*AEPGPA
Trigger: GGCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCACC...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCGCCGCCGCCCTTACTaGCACTGCCGTGTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLRRRPY*HCRVRP
Trigger: CGGCCGGACACGGCAGTGGCAGTAAGGGCGGCGGCG...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307126.10
CDS-3UTR TCA 90 bp CAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCCAGTGTAGCAGCCTaGCCAGCTCGCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: QHPSLPSLLTHRAANGRAASVAA*PARSTR
Trigger: TCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGC...TGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDSTTAV*RTLPTC
Trigger: ACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGA...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCGGCCGATGCCCTTGGTaGCACCCTCCCGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSGRCPW*HPPGTA
Trigger: TGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCC...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCGGGCCCACCACCAGCTaGTCCCCCTCACGGCAAATC +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSGPTTS*SPSRQI
Trigger: GATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCC...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CAA 72 bp GTCAGCTCCGGCAGACAGGCCACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAGCACACAGCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: VSSGRQATGLPG*MSQPGEHTASE
Trigger: CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCTGCCGGAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CAA 72 bp CCGATGCCCTTGGTGACACCCTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTACTCTGGGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PMPLVTPSRNSS*APTFRYSGCFR
Trigger: CCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAGTACTAGCACCTCGGTaGTCTTCCGGGGCATGTCGC +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIVLAPR*SSGACR
Trigger: GCGACATGCCCCGGAAGATCACCGAGGTGCTAGTAC...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAATCCCAGTGTTGGCACTaGCGAGGAGCAGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LPSLLTHRAANGRAAWPESQCWH*RGAGRS
Trigger: ACTGCGCCCTGCTCCTCGTCAGTGCCAACACTGGGA...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCGCCAGTGTAGCAGCCTaGCCAGCTCGCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESASVAA*PARSTR
Trigger: TCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGC...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGGCCCTTGCGAAGCAGTaGACGGTCAAAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKALAKQ*TVKVPK
Trigger: CTTGGGGACTTTGACCGTGCACTGCTTCGCAAGGGC...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTAGCAGCCATCATCCGTaGGGCCCACCACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPSSHHP*GPPPAG
Trigger: ACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCT...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAAGCAGCCATCATCCGTaGGGCCCACCACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPSLLTHRAANGRAAWPESSHHP*GPPPAG
Trigger: ACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCT...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATCCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDPGTAV*RPPSGT
Trigger: AGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGATTCTCTGCCAGCCGTaGCTCTCCACCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEILCQP*LSTLQR
Trigger: CCTCTGGAGGGTGGAGAGCCACGGCTGGCAGAGAAT...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATGCAGTCGGGGCAGTATaGTGTGAGGCCAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDAVGAV*CEAKDG
Trigger: ACCATCTTTGGCCTCACATCATACTGCCCCGACTGC...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCATCCCAGTGTTGGCACTaGCGAGGAGCAGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLASQCWH*RGAGRS
Trigger: ACTGCGCCCTGCTCCTCGTCAGTGCCAACACTGGGA...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGCATCATCCTCAGAGGTaGCCAGCATGGGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKHHPQR*PAWGPC
Trigger: ACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATG...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGGGGGTGACATTGGGTaGCTGAGCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGGGDIG*LSKLLG
Trigger: GCCCAGCAGTTTGCTCAGTCACCCAATGTCACCCCC...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTGCCAGTGTAGCAGCCTaGCCAGCTCGCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFASVAA*PARSTR
Trigger: TCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGC...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAATCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: LPSLLTHRAANGRAAWPESTTAV*RTLPTC
Trigger: ACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGA...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGTTCTCTGCCATCCGGTaGAGGGTCTTGAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKFSAIR*RVLSEA
Trigger: AGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAA...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKGCAGC*ILSAPG
Trigger: TCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACC...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAGACAGGCAGAGCGGTTaGGCTGGATGCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIDRQSG*AGCCIL
Trigger: GAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTC...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGGACAGGCAGAGCGGTTaGGCTGGATGCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEDRQSG*AGCCIL
Trigger: GAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTC...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATCCATCACCATGCCCTTaGGAAGCAGTGCACGGTCAA +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDPSPCP*EAVHGQ
Trigger: TTGACCGTGCACTGCTTCGCAAGGGCATGGTGATGG...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTCTCTCCCTAGCCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESSLPSH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGCTAGGGAGAGA...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419497.5
CDS-3UTR GCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATATTCTGTCCCATTCTCTaGCAGCCGTGGCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIFCPIL*QPWLST
Trigger: GGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAA...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGGGGCCCACCACCAGCTaGTCCCCCTCACGGCAAATC +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLGPTTS*SPSRQI
Trigger: GATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCC...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTTCCGGTGCAGGGTCTTaGGCGAAGCTCGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPSGAGS*AKLAFP
Trigger: AGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGA...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFEVRPD*ISCRWR
Trigger: CCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTC...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTGGCCGATGCCCTTGGTaGCACCCTCCCGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: KTRLMGMQLAFGICQAFAGRCPW*HPPGTA
Trigger: TGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCC...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGTGGCTTGTACATCAGTaGCATGGCCGATGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEWLVHQ*HGRCPW
Trigger: CCAAGGGCATCGGCCATGTCACTGATGTACAAGCCA...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCATTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSLWQPG*LRTRSS
Trigger: GCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAA...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCGCCCTTGCGAAGCAGTaGACGGTCAAAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSALAKQ*TVKVPK
Trigger: CTTGGGGACTTTGACCGTGCACTGCTTCGCAAGGGC...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAGGCTCACCATCACCATaGCCTTGCGAAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: AISSDSGPPPPPDGQEQIGSPSP*PCEAVH
Trigger: GTGCACTGCTTCGCAAGGGCATGGTGATGGTGAGCC...TATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCGGCTCACCATCACCATaGCCTTGCGAAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESGSPSP*PCEAVH
Trigger: GTGCACTGCTTCGCAAGGGCATGGTGATGGTGAGCC...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCGGCTCACCATCACCATaGCCTTGCGAAGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLGSPSP*PCEAVH
Trigger: GTGCACTGCTTCGCAAGGGCATGGTGATGGTGAGCC...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATTATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDYMPSL*LVAPRL
Trigger: CAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATA...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCCACTCCCCTGGCCAGTaGCTTCTGTCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESHSPGQ*LLSHSL
Trigger: CAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTG...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp CCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCTTGTCCAGCTCTCCCTaGGTCAGGACTCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGHTKFGTSPESWQGASGLSSSP*VRTPSR
Trigger: TCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAA...GCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACAAGGACCCGCTCCAGCTaGCGTACTGTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTRTRSS*RTVLST
Trigger: AGTGGAGAGGACAGTACGCCAGCTGGAGCGGGTCCT...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAGAGCGGTTGCGCTaGATGCTGCATACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGAERLR*MLHTLS
Trigger: GCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGC...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ATGLPGLMSQPGEHTASERTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 4 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
3UTR CAA 72 bp GTAATGGCTTGTACATCAGTGACATGGCCGATGCCCTaGGTGACACCCTCCCGGAACAGCAGTTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VMACTSVTWPMP*VTPSRNSSLAP
Trigger: GGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCCAGGATCTCGAAGCTaGTGCTGGAGGTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLPGSRS*CWRFGQ
Trigger: CTGGCCGAACCTCCAGCATCAGCTTCGAGATCCTGG...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCCGTCAGCTGCTGCATaGGTTCCTCCTGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFPSAAA*VPPALC
Trigger: GCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGG...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLSTTAV*RTLPTC
Trigger: ACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGA...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCTTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACAGATGAGCCAACCAGGTaGGCACACAGCTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTDEPTR*AHSFGA
Trigger: TGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATC...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp GGTGTTTCAGGAAGCGGAAACGTACCACTGCCTTCTCGCCTGTCCGCAGTTTGTGATGAGCCAACCAGGTaGGCACACAGCTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GVSGSGNVPLPSRLSAVCDEPTR*AHSFGA
Trigger: TGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATC...ACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp AGACAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQHPSLPSLLTHRAANGRGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...CCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATTTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDLWQPG*LRTRSS
Trigger: GCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAA...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGGCAGC*ILSAPG
Trigger: TCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACC...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPSGCAG*CILSAP
Trigger: TGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCT...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCGCCCTTGCGAAGCAGTaGACGGTCAAAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITALAKQ*TVKVPK
Trigger: CTTGGGGACTTTGACCGTGCACTGCTTCGCAAGGGC...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: PGHTKFGTSPESWQGASGDLFHH*RLTYVA
Trigger: GGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATC...GCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: FPGHTKFGTSPESWQGASAETYH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGC...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTTCACCACGTCCCTCCTaGAGCCGCCACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPSPRPS*SRHFIC
Trigger: ACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGA...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTTTGTCCAGCTCTCCCTaGGTCAGGACTCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCLSSSP*VRTPSR
Trigger: TCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAA...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGTGTGTAGGTACTTATaGTGGCCTGCCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: QHPSLPSLLTHRAANGRAVCRYL*WPARSM
Trigger: CATCGACCTGGCAGGCCACCATAAGTACCTACACAC...TGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGAGGACCCGCTCCAGCTaGCGTACTGTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWRTRSS*RTVLST
Trigger: AGTGGAGAGGACAGTACGCCAGCTGGAGCGGGTCCT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FPGHTKFGTSPESWQGASSMGTL*QPGCLR
Trigger: CCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCT...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATAGCAGCCATCATCCGTaGGGCCCACCACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYSSHHP*GPPPAG
Trigger: ACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCT...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKILVGR*WHGTVR
Trigger: TCTTACTGTTCCATGCCACCACCTTCCGACGAGGAT...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGACACAGAGCCGCCAATaGCAGGGCAGCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWTQSRQ*QGSMAR
Trigger: TCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAGCCACCACCACCAGATaGCCAAGAGCAGATAACCTT +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIATTTR*PRADNL
Trigger: AAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGC...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATACATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 4 (lower is better)
Translates to: AISSDSGPPPPPDGQEQIHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...TATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGACATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 4 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCCCTGCAGCAAATAAGTaGTCACTCCCCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSPAANK*SLPWPV
Trigger: CACTGGCCAGGGGAGTGACCACTTATTTGCTGCAGG...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCTCTTCTGCTGTCCGTaGGTCGCTGTAATTCACCAC +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLLFCCP*VAVIHH
Trigger: GTGGTGAATTACAGCGACTCACGGACAGCAGAAGAG...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAGGGGGTGACATTGGGTaGCTGAGCAAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQGGDIG*LSKLLG
Trigger: GCCCAGCAGTTTGCTCAGTCACCCAATGTCACCCCC...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGCCGTCAGCTGCTGCATaGGTTCCTCCTGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLPSAAA*VPPALC
Trigger: GCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGG...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GGGCACAGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: GHRSGLLTILTTSKWPTLSTTAV*RTLPTC
Trigger: ACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGA...AAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR TCA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGATGAGCCAACCAGGTaGGCACACAGCTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSDEPTR*AHSFGA
Trigger: TGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATC...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCTGGGGAAATGGCCCTTaGGTGAAGGAAAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSWGNGP*VKEREI
Trigger: TATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCA...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATATGCCCCAACCTTCTCTaGCATCCGGTGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQICPNLL*HPVQGL
Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCA...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFGCAGC*ILSAPG
Trigger: TCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACC...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGTGTTTCAGGAAGCGGAAACGTACCACTGCCTTCTCGCCTGTCCGCAGTTTGTAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVSGSGNVPLPSRLSAVCSGCAG*CILSAP
Trigger: TGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCT...ACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR GCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGGCCCTTGCGAAGCAGTaGACGGTCAAAGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGALAKQ*TVKVPK
Trigger: CTTGGGGACTTTGACCGTGCACTGCTTCGCAAGGGC...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACACCGTCTGACGTACGTTaGCCACGTGTACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTPSDVR*PRVLSP
Trigger: AGGTGACAGTACACGTGGGCAACGTACGTCAGACGG...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSDLFHH*RLTYVA
Trigger: GGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATC...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRAETYH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGC...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp ATCAGTGACATGGCCGATGCCCTTGGTGACACCCTCCCGGAACAGCAGTTTGGCCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ISDMADALGDTLPEQQFGHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...GCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR GCA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKHSLSL*HFFRLW
Trigger: CCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATG...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTAAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVSMGTL*QPGCLR
Trigger: CCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCT...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGGCAGAGCGGTTGCGCTaGATGCTGCATACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLAERLR*MLHTLS
Trigger: GCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGC...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: PGHTKFGTSPESWQGASGLVGRW*HGTVRL
Trigger: TAGTCTTACTGTTCCATGCCACCACCTTCCGACGAG...GCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIILVGR*WHGTVR
Trigger: TCTTACTGTTCCATGCCACCACCTTCCGACGAGGAT...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTACGTGTACTGTCACCTaGAATCCTCGTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCTCTVT*NPRRKV
Trigger: CACCTTCCGACGAGGATTCCAGGTGACAGTACACGT...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAACGTGTACTGTCACCTaGAATCCTCGTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPSLLTHRAANGRAAWPETCTVT*NPRRKV
Trigger: CACCTTCCGACGAGGATTCCAGGTGACAGTACACGT...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGACCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRPGTAV*RPPSGT
Trigger: AGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTAACACAGAGCCGCCAATaGCAGGGCAGCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVTQSRQ*QGSMAR
Trigger: TCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGT...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAACACAGAGCCGCCAATaGCAGGGCAGCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRTQSRQ*QGSMAR
Trigger: TCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGT...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGTTGGCAGGGAGCAAGTaGCAGACAGCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRLAGSK*QTAPLS
Trigger: AGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAA...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTTTGGCAGGGAGCAAGTaGCAGACAGCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FPGHTKFGTSPESWQGASLAGSK*QTAPLS
Trigger: AGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAA...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp TCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SWPHQVWHLSRKLAGSKWTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...CCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGTGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFRTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACAAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTRTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GLPGLMSQPGEHTASEHCRRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...GCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTCATTTCTTCAGACTCTaGGCCGCCACCACCACCAGA +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFHFFRL*AATTTR
Trigger: TCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATG...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCACATGCAGCTGGCCTTTaGTATATGCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QHPSLPSLLTHRAANGRAHAAGL*YMPSLC
Trigger: GCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATG...TGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCGTGAGAGTGGTAGGATaGGGAACTCAGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESVRVVG*GTQMPP
Trigger: TGGTGGCATCTGAGTTCCCCATCCTACCACTCTCAC...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTCTCACCTTGGCATaGATCTTTTCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLPLTLA*IFSTTA
Trigger: GGCAGTGGTGGAAAAGATCCATGCCAAGGTGAGAGG...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTATCCGGTGCAGGGTCTTaGGCGAAGCTCGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVSGAGS*AKLAFP
Trigger: AGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGA...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCACGGGGCAGTATGATGTaGGGCCAAAGATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSRGSMM*GQRWWC
Trigger: ACACCACCATCTTTGGCCTCACATCATACTGCCCCG...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGACTGCTGGGCAGCAGTaGCGGCATCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVTAGQQ*RHHPQR
Trigger: CCTCTGAGGATGATGCCGTCACTGCTGCCCAGCAGT...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGGTGACATTGGGTGACTaGGCAAACTGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRVTLGD*ANCWAA
Trigger: TGCTGCCCAGCAGTTTGCTCAGTCACCCAATGTCAC...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGTGACATTGGGTGACTaGGCAAACTGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRVTLGD*ANCWAA
Trigger: TGCTGCCCAGCAGTTTGCTCAGTCACCCAATGTCAC...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGTGGCTTGTACATCAGTaGCATGGCCGATGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLWLVHQ*HGRCPW
Trigger: CCAAGGGCATCGGCCATGTCACTGATGTACAAGCCA...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGATGCCCCAACCTTCTCTaGCATCCGGTGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRCPNLL*HPVQGL
Trigger: AAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCA...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACAGATGTTCCCTTGTGGTaGCAGCAATCCCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTDVPLW*QQSQCW
Trigger: CCAACACTGGGATTGCTGGCACCACAAGGGAACATC...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCTGGAACTCCGTCAGCTaGTGCATGAGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICWNSVS*CMSSSC
Trigger: GCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCA...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRGCAGC*ILSAPG
Trigger: TCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACC...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAGACAGGCAGAGCGGTTaGGCTGGATGCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQDRQSG*AGCCIL
Trigger: GAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTC...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGACCATCACCATGCCCTTaGGAAGCAGTGCACGGTCAA +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRPSPCP*EAVHGQ
Trigger: TTGACCGTGCACTGCTTCGCAAGGGCATGGTGATGG...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRPSDVR*PRVLSP
Trigger: AGGTGACAGTACACGTGGGCAACGTACGTCAGACGG...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLPSDVR*PRVLSP
Trigger: AGGTGACAGTACACGTGGGCAACGTACGTCAGACGG...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTGGCCTGGGCTTCTCCTaGTGTAATGGCTTGTACATC +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFGLGFS*CNGLYI
Trigger: GATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCC...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGACTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITYMPSL*LVAPRL
Trigger: CAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATA...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAGGGGGTTGTTGGCTTTaGCCCCTCTGTTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQGGCWL*PLCSFR
Trigger: ACGGAAGGAACAGAGGGGGCAAAGCCAACAACCCCC...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307126.10
CDS-3UTR GCA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATGATCAAGGAGTTCTCTaGCAGTCTGGGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYDQGVL*QSGAGL
Trigger: GAGGCCTGCCCCAGACTGGCAGAGAACTCCTTGATC...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp TCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGTGTAGGTACTTATGGTaGCCTGCCAGGTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: SWPHQVWHLSRKLAGSKWCRYLW*PARSMK
Trigger: CTTCATCGACCTGGCAGGCCACCATAAGTACCTACA...CCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCCCAGATGTTCCCTTGTaGTGCCAGCAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITPDVPL*CQQSQC
Trigger: ACACTGGGATTGCTGGCACCACAAGGGAACATCTGG...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCTCTCCACTGTGGTCTTaGCACATAGGTCGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLSPLWS*HIGRSC
Trigger: GCAAGATCGACCTATGTGCCAAGACCACAGTGGAGA...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCGGGCCCACCACCAGCTaGTCCCCCTCACGGCAAATC +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVGPTTS*SPSRQI
Trigger: GATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCC...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAGCAGAGCGGTTGCGCTaGATGCTGCATACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRAERLR*MLHTLS
Trigger: GCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGC...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGATGTACATCAGTGACATaGCCGATGCCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGCTSVT*PMPLVT
Trigger: TGTCACCAAGGGCATCGGCCATGTCACTGATGTACA...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCAAGCCCATGTTGGCCTaGGCTTCTCCTGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITKPMLA*ASPAVM
Trigger: CATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCAAGCCCATGTTGGCCTaGGCTTCTCCTGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFKPMLA*ASPAVM
Trigger: CATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCCGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSRRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCCATGCAGCTGGCCTTTaGTATATGCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESHAAGL*YMPSLC
Trigger: GCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATG...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAAGGTCCCTCTCACCTTaGCATGGATCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: AISSDSGPPPPPDGQEQIRSLSP*HGSFPP
Trigger: TGGTGGAAAAGATCCATGCCAAGGTGAGAGGGACCT...TATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGAGTTCTCTGCCAGTCTaGGGCAGGCCTCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGSSLPV*GRPPSF
Trigger: AAAAGAGGGAGGCCTGCCCCAGACTGGCAGAGAACT...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGCTCTTCTGCTGTCCGTaGGTCGCTGTAATTCACCAC +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWLFCCP*VAVIHH
Trigger: GTGGTGAATTACAGCGACTCACGGACAGCAGAAGAG...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTGCTCTTTGCTGTTGGTaGGTGGCGGCAGAATATTCA +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFALCCW*VAAEYS
Trigger: TGAATATTCTGCCGCCACTCACCAACAGCAAAGAGC...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTATGGCTTGTACATCAGTaGCATGGCCGATGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVWLVHQ*HGRCPW
Trigger: CCAAGGGCATCGGCCATGTCACTGATGTACAAGCCA...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGATTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTTGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFCCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp AAGCCCATGTTGGCCTGGGCTTCTCCTGCTGTAATGGCTTGTACATCAGTGACAGGAAAAAGACCAGACTaGTGGGCATGCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KPMLAWASPAVMACTSVTGKRPD*WACSWP
Trigger: AGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCC...TGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR GCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTGTACTTATGGTGGCCTaGCAGGTCGATGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFVLMVA*QVDEGD
Trigger: ATCACCTTCATCGACCTGGCAGGCCACCATAAGTAC...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGTTCCCTTGTGGTaGCAGCAATCCCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRDVPLW*QQSQCW
Trigger: CCAACACTGGGATTGCTGGCACCACAAGGGAACATC...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGCATGAGTTCCTCCTaGTCTTTGCTGTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLMSQPGEHTASEHCPESCMSSS*SLLLVS
Trigger: ACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCA...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAATGGAACTCCGTCAGCTaGTGCATGAGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQWNSVS*CMSSSC
Trigger: GCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCA...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGCTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCACACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLAHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATATATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQIYMPSL*LVAPRL
Trigger: CAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATA...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGTATATGCCAAGCCTTTaGTTGGTAGCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRYMPSL*LVAPRL
Trigger: CAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATA...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCGATGGGGAACTCAGATaGCACCAGTCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITDGELR*HQSGKV
Trigger: TACTTTCCCAGACTGGTGGCATCTGAGTTCCCCATC...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGCTCAAAGCGGTACTaGGATGGATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFCSKRY*DGFTSF
Trigger: GAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCA...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAAGGTCTAGGAACTGTTaGTTGTCAGGGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: LPSLLTHRAANGRAAWPERSRNC*LSGTFR
Trigger: ACGAAAGGTCCCTGACAACCAACAGTTCCTAGACCT...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTCCAGATGTTCCCTTGTaGTGCCAGCAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FPGHTKFGTSPESWQGASPDVPL*CQQSQC
Trigger: ACACTGGGATTGCTGGCACCACAAGGGAACATCTGG...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTTCTCCACTGTGGTCTTaGCACATAGGTCGATCTTGC +
Preference number: 4 (lower is better)
Translates to: LRPQHRVATLPFTVPVPFSPLWS*HIGRSC
Trigger: GCAAGATCGACCTATGTGCCAAGACCACAGTGGAGA...AAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAAACAGTCCCCACCTCTaGTACTGTGTAGATTTCATC +
Preference number: 4 (lower is better)
Translates to: QHPSLPSLLTHRAANGRANSPHL*YCVDFI
Trigger: GATGAAATCTACACAGTACCAGAGGTGGGGACTGTT...TGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCACGGCAAATCCCACTaGAAAGTGTTCCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLHGKSH*KVFLQQ
Trigger: TTGTTGGAGGAACACTTTCCAGTGGGATTTGCCGTG...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGCAGCCATCATCCGTaGGGCCCACCACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRSSHHP*GPPPAG
Trigger: ACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCT...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GGTGTTTCAGGAAGCGGAAACGTACCACTGCCTTCTCGCCTGTCCGCAGTTTGTATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GVSGSGNVPLPSRLSAVCILVGR*WHGTVR
Trigger: TCTTACTGTTCCATGCCACCACCTTCCGACGAGGAT...ACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGACGTGTACTGTCACCTaGAATCCTCGTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWTCTVT*NPRRKV
Trigger: CACCTTCCGACGAGGATTCCAGGTGACAGTACACGT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCAGTTTGTCCTTGGCATaGATCTTTTCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLSLSLA*IFSTTA
Trigger: GGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACT...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCTCCGCAGTTTGTCCTTaGCATGGATCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSSAVCP*HGSFPP
Trigger: TGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGA...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CCA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCCACCTTCAGGTACTCTaGGTGTTTCAGGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFHLQVL*VFQEAE
Trigger: TTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTG...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCATGTACATCAGTGACATaGCCGATGCCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLACTSVT*PMPLVT
Trigger: TGTCACCAAGGGCATCGGCCATGTCACTGATGTACA...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGAAGCCCATGTTGGCCTaGGCTTCTCCTGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWKPMLA*ASPAVM
Trigger: CATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCACGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLARRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGGCCACCACCACCAGATaGCCAAGAGCAGATAACCTT +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLATTTR*PRADNL
Trigger: AAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGC...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCGCCACCACCACCAGATaGCCAAGAGCAGATAACCTT +
Preference number: 4 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICATTTR*PRADNL
Trigger: AAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGC...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTGTGAGAGTGGTAGGATaGGGAACTCAGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLVRVVG*GTQMPP
Trigger: TGGTGGCATCTGAGTTCCCCATCCTACCACTCTCAC...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTCTCTTTTCTGACCTCTaGAGAAATGGAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCLFSDL*RNGRPG
Trigger: ACCTGGCCTTCCATTTCTCCAGAGGTCAGAAAAGAG...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
3UTR CAA 72 bp CAAAACATGCCCAGTCTTAGTAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAGCTCCGGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QNMPSLSSGDEE*MSGSSQLRQTG
Trigger: GCCTGTCTGCCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGGCATGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCGACTCCAAGCAGAGTTaGCTTCCCAGAGTCCACATT +
Preference number: 4 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICDSKQS*LPRVHI
Trigger: AATGTGGACTCTGGGAAGTCAACTCTGCTTGGAGTC...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPEVRPD*ISCRWR
Trigger: CCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTC...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCCCAGGATCTCGAAGCTaGTGCTGGAGGTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAWPEVTLYIVGTAIELSPGSRS*CWRFGQ
Trigger: CTGGCCGAACCTCCAGCATCAGCTTCGAGATCCTGG...GGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAAGGCCGATGCCCTTGGTaGCACCCTCCCGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKGRCPW*HPPGTA
Trigger: TGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCC...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGTTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTTGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 4 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLCCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGTGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGCCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KTRLMGMQLAFGICQAFATASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGGAACTCAGATaGCACCAGTCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRDGELR*HQSGKV
Trigger: TACTTTCCCAGACTGGTGGCATCTGAGTTCCCCATC...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATATGCTCAAAGCGGTACTaGGATGGATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQICSKRY*DGFTSF
Trigger: GAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCA...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTCACGGCAAATCCCACTaGAAAGTGTTCCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFHGKSH*KVFLQQ
Trigger: TTGTTGGAGGAACACTTTCCAGTGGGATTTGCCGTG...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: FPGHTKFGTSPESWQGASLVGRW*HGTVRL
Trigger: TAGTCTTACTGTTCCATGCCACCACCTTCCGACGAG...ACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGLVGRW*HGTVRL
Trigger: TAGTCTTACTGTTCCATGCCACCACCTTCCGACGAG...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWILVGR*WHGTVR
Trigger: TCTTACTGTTCCATGCCACCACCTTCCGACGAGGAT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGCACCTTCAGGTACTCTaGGTGTTTCAGGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRHLQVL*VFQEAE
Trigger: TTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTG...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCATGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGTGGCCACACCAAGTTTaGCACCTCTCCAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGWPHQV*HLSRKL
Trigger: CAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCA...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGCATGCAGCTGGCCTTTaGTATATGCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWHAAGL*YMPSLC
Trigger: GCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATG...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCATGCAGCTGGCCTTTaGTATATGCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGHAAGL*YMPSLC
Trigger: GCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATG...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGTGAGAGTGGTAGGATaGGGAACTCAGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDVRVVG*GTQMPP
Trigger: TGGTGGCATCTGAGTTCCCCATCCTACCACTCTCAC...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGCTACCCACCCTAAGTaGGGTTTTATTCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLAATHPK*GFIPIV
Trigger: CACAATGGGAATAAAACCCCACTTAGGGTGGGTAGC...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAACTGCTGGGCAGCAGTaGCGGCATCATCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGTAGQQ*RHHPQR
Trigger: CCTCTGAGGATGATGCCGTCACTGCTGCCCAGCAGT...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACATATTCAGAAAGACTTTaGGGAGGTCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTYSERL*GGPDSL
Trigger: GAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATA...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTGCTCTTTGCTGTTGGTaGGTGGCGGCAGAATATTCA +
Preference number: 4 (lower is better)
Translates to: KTRLMGMQLAFGICQAFAALCCW*VAAEYS
Trigger: TGAATATTCTGCCGCCACTCACCAACAGCAAAGAGC...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAAGCCAGTGTAGCAGCCTaGCCAGCTCGCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKASVAA*PARSTR
Trigger: TCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGC...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTATGGGGAAATGGCCCTTaGGTGAAGGAAAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVWGNGP*VKEREI
Trigger: TATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCA...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp GACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTTGATTTGTGTCACCAGGTaGTCAAAGCGGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: DQTDGHAAGLWYMPSLCLICVTR*SKRYWD
Trigger: ATCCCAGTACCGCTTTGAGCACCTGGTGACACAAAT...CAAGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCGACAGGCAGAGCGGTTaGGCTGGATGCTGCATACTC +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVDRQSG*AGCCIL
Trigger: GAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTC...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp TTCTACTCTTCTTTAAGTAGCTGGCACTGTATCTCTGCCAGGGCACAGAAGTGGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: FYSSLSSWHCISARAQKWPSDVR*PRVLSP
Trigger: AGGTGACAGTACACGTGGGCAACGTACGTCAGACGG...CCACTTCTGTGCCCTGGCAGAGATACAGTGCCAGCTACTTAAAGAAGAGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCTTCTCCCTCAGGACTaGCCTTTCCTGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVLLPQD*PFLATP
Trigger: TGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAG...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRHSLSL*HFFRLW
Trigger: CCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATG...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAGGAAAGGAGAGTCCATaGCTAAAGAGTAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LGSPTPGPAQQIAPVGPIGKESP*LKSRKY
Trigger: ATATTTCCTACTCTTTAGGCATGGACTCTCCTTTCC...TATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTAAAGCGGTACTGGGATaGATTCACCAGCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPKAVLG*IHQLQF
Trigger: AAATTGAAGCTGGTGAATCCATCCCAGTACCGCTTT...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATTGTAGGTACTTATGGTaGCCTGCCAGGTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYCRYLW*PARSMK
Trigger: CTTCATCGACCTGGCAGGCCACCATAAGTACCTACA...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCTTTGCTGTTGGTGAGTaGCGGCAGAATATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RLWAATTTRWPRADNLLSFAVGE*RQNIQK
Trigger: TTTCTGAATATTCTGCCGCCACTCACCAACAGCAAA...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGACTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRLVGRW*HGTVRL
Trigger: TAGTCTTACTGTTCCATGCCACCACCTTCCGACGAG...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAAGTTTGTCCTTGGCATaGATCTTTTCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRSLSLA*IFSTTA
Trigger: GGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACT...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CCA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATATCCGCAGTTTGTCCTTaGCATGGATCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQISAVCP*HGSFPP
Trigger: TGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGA...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCTTGGCAGGGAGCAAGTaGCAGACAGCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPLAGSK*QTAPLS
Trigger: AGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAA...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCTTGGCAGGGAGCAAGTaGCAGACAGCACCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRLAGSK*QTAPLS
Trigger: AGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAA...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATCGAAGAATTGATGAGTaGATCCAGTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYRRIDE*IQSAPA
Trigger: TGCCGGAGCTGACTGGATCCACTCATCAATTCTTCG...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAAAATCCCTGAGTCCATaGGAACCCAGGACACTAACA +
Preference number: 4 (lower is better)
Translates to: PPPPDGQEQITFCPQPGRKSLSP*EPRTLT
Trigger: TGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTT...TCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACGTACTAGCACCTCGGTaGTCTTCCGGGGCATGTCGC +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYVLAPR*SSGACR
Trigger: GCGACATGCCCCGGAAGATCACCGAGGTGCTAGTAC...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAATCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKSTTAV*RTLPTC
Trigger: ACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGA...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCTTCGGAGCACTGCCCTaGATCCTGTCTTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPFGALP*ILSSPS
Trigger: TGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAA...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp GGGCACAGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTGCTACCTATTTCACGTaGAAGGCCTCAGTATTCTGC +
Preference number: 4 (lower is better)
Translates to: GHRSGLLTILTTSKWPTLATYFT*KASVFC
Trigger: GCAGAATACTGAGGCCTTTCACGTGAAATAGGTAGC...AAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCTTCTCTGCCATCCGGTaGAGGGTCTTGAGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRFSAIR*RVLSEA
Trigger: AGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAA...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGGTACTTATGGTGGCCTaGCAGGTCGATGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVVLMVA*QVDEGD
Trigger: ATCACCTTCATCGACCTGGCAGGCCACCATAAGTAC...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp GCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: AAWPEVTLYIVGTAIELSPSDVR*PRVLSP
Trigger: AGGTGACAGTACACGTGGGCAACGTACGTCAGACGG...GGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp TATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: YSWGGLCNLHISCSLPFVAETYH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGC...GACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTCATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: KTRLMGMQLAFGICQAFAHSLSL*HFFRLW
Trigger: CCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATG...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AAGCCCATGTTGGCCTGGGCTTCTCCTGCTGTAATGGCTTGTACATCAGTGACACATTCACTGTCCCTGTaGCATTTCTTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: KPMLAWASPAVMACTSVTHSLSL*HFFRLW
Trigger: CCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATG...TGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR GCA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCGGAAAGGAGAGTCCATaGCTAAAGAGTAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: SQPGEHTASEHCPESCLLGKESP*LKSRKY
Trigger: ATATTTCCTACTCTTTAGGCATGGACTCTCCTTTCC...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAAACAGTCCCCACCTCTaGTACTGTGTAGATTTCATC +
Preference number: 4 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSNSPHL*YCVDFI
Trigger: GATGAAATCTACACAGTACCAGAGGTGGGGACTGTT...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTGCAGAGCGGTTGCGCTaGATGCTGCATACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ATYMALRRGIEKGVLLRAAERLR*MLHTLS
Trigger: GCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGC...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTCAGATGCCACCAGTCTaGGAAAGTAAAACATTTGAT +
Preference number: 4 (lower is better)
Translates to: QPGEHTASEHCPESCLLPQMPPV*ESKTFD
Trigger: ATCAAATGTTTTACTTTCCCAGACTGGTGGCATCTG...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAAAATCCCTGAGTCCATaGGAACCCAGGACACTAACA +
Preference number: 4 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQKSLSP*EPRTLT
Trigger: TGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTT...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGAAAATCCCTGAGTCCATaGGAACCCAGGACACTAACA +
Preference number: 4 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRKSLSP*EPRTLT
Trigger: TGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTT...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp TATATTGTAGGGACAGCAATAGAACTGTCCCTGCCTGAAGGGTTCAGAAGCCCATGGGGAAATGGCCCTTaGGTGAAGGAAAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: YIVGTAIELSLPEGFRSPWGNGP*VKEREI
Trigger: TATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCA...TGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR GCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGSGCAG*CILSAP
Trigger: TGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCT...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AGTCCATGCCTAAAGAGTAGGAAATATGGCAACATCTTTCCCTTTCCTCCTGGTAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPCLKSRKYGNIFPFPPGSGCAG*CILSAP
Trigger: TGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCT...ACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACTCTTTAGGCATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAACCCGGAACAGCAGTTTaGCGCCCACCTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKPGTAV*RPPSGT
Trigger: AGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGG...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCGCCACCACCACCAGATaGCCAAGAGCAGATAACCTT +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPATTTR*PRADNL
Trigger: AAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGC...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCACAGATGCCACCAGTCTaGGAAAGTAAAACATTTGAT +
Preference number: 4 (lower is better)
Translates to: RTALSWPHQVWHLSRKLAQMPPV*ESKTFD
Trigger: ATCAAATGTTTTACTTTCCCAGACTGGTGGCATCTG...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCGTGAGAGTGGTAGGATaGGGAACTCAGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPVRVVG*GTQMPP
Trigger: TGGTGGCATCTGAGTTCCCCATCCTACCACTCTCAC...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGGTTTTATTCCCATTGTaGGATCAAGGAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGVLFPL*DQGVLC
Trigger: GCAGAGAACTCCTTGATCCCACAATGGGAATAAAAC...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR TCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAACGGGGCAGTATGATGTaGGGCCAAAGATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKRGSMM*GQRWWC
Trigger: ACACCACCATCTTTGGCCTCACATCATACTGCCCCG...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACGCAGTCGGGGCAGTATaGTGTGAGGCCAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYAVGAV*CEAKDG
Trigger: ACCATCTTTGGCCTCACATCATACTGCCCCGACTGC...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR TCA 90 bp GCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCTGTTGTGACCATTCCTaGAGTGCAGAGACCACACCA +
Preference number: 4 (lower is better)
Translates to: AAWPEVTLYIVGTAIELSCCDHS*SAETTP
Trigger: TGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACA...GGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR TCA 90 bp TTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCCTGGGGAAATGGCCCTTaGGTGAAGGAAAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LHGLEKRYRKRSAFEGYPWGNGP*VKEREI
Trigger: TATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCA...GGGGTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR TCA 90 bp CACAGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAACAATACTGGAACTCTaGACCTTCAGGTACTCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSGLLTILTTSKWPTLQTILEL*TFRYSG
Trigger: CCCAGAGTACCTGAAGGTTCAGAGTTCCAGTATTGT...TTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCCATCACCATGCCCTTaGGAAGCAGTGCACGGTCAA +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYPSPCP*EAVHGQ
Trigger: TTGACCGTGCACTGCTTCGCAAGGGCATGGTGATGG...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGDLFHH*RLTYVA
Trigger: GGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATC...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: ATYMALRRGIEKGVLLRADLFHH*RLTYVA
Trigger: GGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATC...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp AGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAATAGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: RSGLLTILTTSKWPTLQIDLFHH*RLTYVA
Trigger: GGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATC...TATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTGGCCTGGGCTTCTCCTaGTGTAATGGCTTGTACATC +
Preference number: 4 (lower is better)
Translates to: ATYMALRRGIEKGVLLRAGLGFS*CNGLYI
Trigger: GATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCC...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp AGTCCATGCCTAAAGAGTAGGAAATATGGCAACATCTTTCCCTTTCCTCCTGGTACAGCTTCGGAGCACTaGCCTGAATCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPCLKSRKYGNIFPFPPGTASEH*PESCLL
Trigger: GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGT...ACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACTCTTTAGGCATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCGGAAAGGAGAGTCCATaGCTAAAGAGTAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: PQRKKTRLMGMQLAFGICGKESP*LKSRKY
Trigger: ATATTTCCTACTCTTTAGGCATGGACTCTCCTTTCC...GCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR GCA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGGGAAAGGAGAGTCCATaGCTAAAGAGTAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRGKESP*LKSRKY
Trigger: ATATTTCCTACTCTTTAGGCATGGACTCTCCTTTCC...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCTCACGTGTACTGTCACCTaGAATCCTCGTCGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FLGWALQFTYQLLFTFCLTCTVT*NPRRKV
Trigger: CACCTTCCGACGAGGATTCCAGGTGACAGTACACGT...GAGACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp CACAGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAATCCGCAGTTTGTCCTTaGCATGGATCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: HRSGLLTILTTSKWPTLQSAVCP*HGSFPP
Trigger: TGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGA...TTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp GCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCCCACCTTCAGGTACTCTaGGTGTTTCAGGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: AAWPEVTLYIVGTAIELSHLQVL*VFQEAE
Trigger: TTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTG...GGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACAGGACTGCCCTTTCCTaGCCACACCAAGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYRTALS*PHQVWH
Trigger: GTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTCTACTCTTCTTTAAGTAGCTGGCACTGTATCTCTGCCAGGGCACAGAAGTGGAACCTTCAGGTACTCTaGGTGTTTCAGGAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: FYSSLSSWHCISARAQKWNLQVL*VFQEAE
Trigger: TTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTT...CCACTTCTGTGCCCTGGCAGAGATACAGTGCCAGCTACTTAAAGAAGAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCAAGAACGGTTATGTCTaGCCCAACCTTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVKNGYV*PNLLCH
Trigger: ATGGCAGAGAAGGTTGGGGCAGACATAACCGTTCTT...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWAETYH*LLACPQ
Trigger: CTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGC...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACGGCCTGGGCTTCTCCTaGTGTAATGGCTTGTACATC +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYGLGFS*CNGLYI
Trigger: GATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCC...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR GCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTCACACCAGCAAAACATaGCCAGTCTTAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ATYMALRRGIEKGVLLRAHTSKT*PVLVVG
Trigger: CCCCACTACTAAGACTGGGCATGTTTTGCTGGTGTG...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGATGTACATCAGTGACATaGCCGATGCCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGCTSVT*PMPLVT
Trigger: TGTCACCAAGGGCATCGGCCATGTCACTGATGTACA...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CCA 90 bp TATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCGCCAGGGCACAGAAGTaGGCTCCTTACTATTCTGAC +
Preference number: 4 (lower is better)
Translates to: YSWGGLCNLHISCSLPFVARAQK*APYYSD
Trigger: GTCAGAATAGTAAGGAGCCCACTTCTGTGCCCTGGC...GACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTATTTGTGTCACCAGGTaGTCAAAGCGGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: ATYMALRRGIEKGVLLRAICVTR*SKRYWD
Trigger: ATCCCAGTACCGCTTTGAGCACCTGGTGACACAAAT...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAGAACGGTTATGTCTaGCCCAACCTTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGKNGYV*PNLLCH
Trigger: ATGGCAGAGAAGGTTGGGGCAGACATAACCGTTCTT...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACGATGGGGAACTCAGATaGCACCAGTCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYDGELR*HQSGKV
Trigger: TACTTTCCCAGACTGGTGGCATCTGAGTTCCCCATC...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LSLFLGWALQFTYQLLFTILVGR*WHGTVR
Trigger: TCTTACTGTTCCATGCCACCACCTTCCGACGAGGAT...GGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp AGTCCATGCCTAAAGAGTAGGAAATATGGCAACATCTTTCCCTTTCCTCCTGGTAGTTTGTCCTTGGCATaGATCTTTTCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SPCLKSRKYGNIFPFPPGSLSLA*IFSTTA
Trigger: GGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACT...ACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACTCTTTAGGCATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CCA 90 bp AGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAATAAGTTTGTCCTTGGCATaGATCTTTTCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: RSGLLTILTTSKWPTLQISLSLA*IFSTTA
Trigger: GGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACT...TATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGAAGTGGTCACTCCCCTaGCCAGTGCCTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWKWSLP*PVPSVP
Trigger: TGGGACAGAAGGCACTGGCCAGGGGAGTGACCACTT...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CCA 90 bp GGGCACAGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTTCTTTATTCCTGGGGTaGGCTTTGCAATTTACATAT +
Preference number: 4 (lower is better)
Translates to: GHRSGLLTILTTSKWPTLSLFLG*ALQFTY
Trigger: ATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGA...AAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCTGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR TCA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGATATTCAGAAAGACTTTaGGGAGGTCCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGYSERL*GGPDSL
Trigger: GAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATA...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp CTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTCCTGGGGTGGGCTTTaGAATTTACATATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLFLGWALQFTYQLLFTSWGGL*NLHISC
Trigger: GCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGA...GGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp GGCAGCATGGCCAGAAGTCACCTTATATATTGTAGGGACAGCAATAGAACTGTCAAAGCGGTACTGGGATaGATTCACCAGCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: GSMARSHLIYCRDSNRTVKAVLG*IHQLQF
Trigger: AAATTGAAGCTGGTGAATCCATCCCAGTACCGCTTT...GACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: SFFIPGVGFAIYISAALYLVGRW*HGTVRL
Trigger: TAGTCTTACTGTTCCATGCCACCACCTTCCGACGAG...GTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACTCCGCAGTTTGTCCTTaGCATGGATCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYSAVCP*HGSFPP
Trigger: TGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGA...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR TCA 90 bp TTTTCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTGGCTCCTTACTATTCTaGCCACTAGCAAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: FSFFIPGVGFAIYISAALGSLLF*PLASGQ
Trigger: TTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCC...AAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp TTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTTTTGTCTCAAGGCCTCAGTATTCTaGTCACTTGAACTACGGAAA +
Preference number: 4 (lower is better)
Translates to: FLGWALQFTYQLLFTFCLKASVF*SLELRK
Trigger: TTTCCGTAGTTCAAGTGAGCAGAATACTGAGGCCTT...GAGACAAAAGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp CTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTCTTCTTTAAGTAGCTaGCACTGTATCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLFLGWALQFTYQLLFTSSLSS*HCISAR
Trigger: CCTGGCAGAGATACAGTGCCAGCTACTTAAAGAAGA...GGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR GCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGGATGGGGAACTCAGATaGCACCAGTCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWDGELR*HQSGKV
Trigger: TACTTTCCCAGACTGGTGGCATCTGAGTTCCCCATC...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCAGTGTGTAGGTACTTATaGTGGCCTGCCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: CIYIYMHRETLANKSLSPVCRYL*WPARSM
Trigger: CATCGACCTGGCAGGCCACCATAAGTACCTACACAC...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAATTTGCTGTTGGTGAGTaGCGGCAGAATATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKFAVGE*RQNIQK
Trigger: TTTCTGAATATTCTGCCGCCACTCACCAACAGCAAA...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CCA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCAACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CIYIYMHRETLANKSLSPTSPES*QGASGR
Trigger: TCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGT...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp CTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAATACAGGGTAGCTTCTTTCTTTATTCCTaGGGTGGGCTTTGCAATTTA +
Preference number: 4 (lower is better)
Translates to: LLTILTTSKWPTLQIQGSFFLYS*GGLCNL
Trigger: TAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAA...GCTACCCTGTATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR TCA 90 bp TTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTACCTAGTATTCTGCTCACTTaGACTACGGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLYSWGGLCNLHISCSLPSILLT*TTENRP
Trigger: TGGCCTATTTTCCGTAGTTCAAGTGAGCAGAATACT...AGGTAAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp AACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTACCAGATGCCACCAGTCTaGGAAAGTAAAACATTTGAT +
Preference number: 4 (lower is better)
Translates to: NLHGLEKRYRKRSAFEGYQMPPV*ESKTFD
Trigger: ATCAAATGTTTTACTTTCCCAGACTGGTGGCATCTG...GTAGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGAAATCCCTGAGTCCATaGGAACCCAGGACACTAACA +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWKSLSP*EPRTLT
Trigger: TGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTT...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CCA 90 bp TTTCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTCTGACCACTAGCAAGTaGCCAACTCTTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: FLSLFLGWALQFTYQLLFLTTSK*PTLQIQ
Trigger: CTGTATTTGAAGAGTTGGCCACTTGCTAGTGGTCAG...AAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCAAGGTCTAGGAACTGTTaGTTGTCAGGGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: CIYIYMHRETLANKSLSPRSRNC*LSGTFR
Trigger: ACGAAAGGTCCCTGACAACCAACAGTTCCTAGACCT...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR GCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGTTTCCATCTTCAGCCTaGTTTTCCCAGAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWFPSSA*FSQKSM
Trigger: CATAGACTTCTGGGAAAAGCAGGCTGAAGATGGAAA...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307114.11
CDS-3UTR CCA 90 bp TTTTCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTACTTGGTTACAATACTaGAACTCTGAACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FSFFIPGVGFAIYISAALTWLQY*NSEPSG
Trigger: ACCTGAAGGTTCAGAGTTCCAGTATTGTAACCAAGT...AAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CCA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGCAGATGCCACCAGTCTaGGAAAGTAAAACATTTGAT +
Preference number: 4 (lower is better)
Translates to: IYIYMHRETLANKSLSPWQMPPV*ESKTFD
Trigger: ATCAAATGTTTTACTTTCCCAGACTGGTGGCATCTG...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS CCA 90 bp GTCACTCCCCTGGCCAGTGCCTTCTGTCCCATTCTCTGCCAGCCGTaGCTCTCCACCCTCCAGAGGCCTATCAGGCCGCTACCCACCCTA +
Preference number: 5 (lower is better)
Translates to: VTPLASAFCPILCQP*LSTLQRPIRPLPTL
Trigger: TAGGGTGGGTAGCGGCCTGATAGGCCTCTGGAGGGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CAA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTGCCCGGCCCCGCCCATaGTCCAGCTCTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: QPGEHTASEHCPESCLLPARPRP*SSSPWV
Trigger: GACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGC...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCAGGTGGCGGAAAAGGTaGAGCCGAGCCCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GLPGLMSQPGEHTASEHCRWRKR*SRARPR
Trigger: GCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCACCT...GCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS TCA 90 bp CGAAGCAGTGCACGGTCAAAGTCCCCAAGCGCCAGTGTAGCAGCCTaGCCAGCTCGCAGCACACGACAGGCAGAGCGGTTGCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: RSSARSKSPSASVAA*PARSTRQAERLRWM
Trigger: CATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGCGCTTGGGGACTTTGACCGTGCACTGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS GCA 90 bp GACCAGCTCGCAGCACACGACAGGCAGAGCGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGAAGCAGCCATCATCCGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: DQLAAHDRQSGCAGC*ILSAPGSSHHPWGP
Trigger: TGGGCCCCACGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAGCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS GCA 90 bp CCTGACCAGCTCGCAGCACACGACAGGCAGAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCAGGAAGCAGCCATCATCCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PDQLAAHDRQSGCAG*CILSAPGSSHHPWG
Trigger: GCCCCACGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAGCTGGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS CCA 90 bp GCAGTGACGGCATCATCCTCAGAGGTGACCAGCATGGGGACCTTGTaGCAGCCAGGCTGCTTGAGGACCCGCTCCAGCTGGCGTACTGTC +
Preference number: 5 (lower is better)
Translates to: AVTASSSEVTSMGTL*QPGCLRTRSSWRTV
Trigger: GACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATGCCGTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 90 bp GCTGGATGCTGCATACTCTCAGCTCCAGGAAGCAGCCATCATCCGTaGGGCCCACCACCAGCTGGTCCCCCTCACGGCAAATCCCACTGG +
Preference number: 5 (lower is better)
Translates to: AGCCILSAPGSSHHP*GPPPAGPPHGKSHW
Trigger: CCAGTGGGATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS TCA 90 bp CGGTTATGTCTGCCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTTaGGCGAAGCTCGCATTTCCTCCTCAGCCAGCCCCACCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLCLPQPSLPSGAGS*AKLAFPPQPAPPAA
Trigger: GGCTGCTGGTGGGGCTGGCTGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
CDS GCA 90 bp TCATCCTCAGAGGTGACCAGCATGGGGACCTTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGCTGGCGTACTGTCCTCTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSSEVTSMGTLWQPG*LRTRSSWRTVLSTV
Trigger: CACAGTGGAGAGGACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 90 bp CTCAGCTCCAGGAAGCAGCCATCATCCGTGGGGCCCACCACCAGCTaGTCCCCCTCACGGCAAATCCCACTGGAAAGTGTTCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: LSSRKQPSSVGPTTS*SPSRQIPLESVPPT
Trigger: TGTTGGAGGAACACTTTCCAGTGGGATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCTTCCTGGAGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS-3UTR CAA 90 bp GCCTGGGCCAGCACAACAAATAGCACCTGTGGGGCCTATAAGCCGGGAGGGGATCCCACCAGCAGCCCATaGTCCTCTACCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: AWASTTNSTCGAYKPGGDPTSSP*SSTPIW
Trigger: CCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGG...ATCCCCTCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAGCCCGGCCCCGCCCATaGTCCAGCTCTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQARPRP*SSSPWV
Trigger: GACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGC...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCACATGGCCGATGCCCTaGGTGACACCCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GLPGLMSQPGEHTASEHCTWPMP*VTPSRN
Trigger: GTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGT...GCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp CCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCACATGGCCGATGCCCTaGGTGACACCCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PGHTKFGTSPESWQGASGTWPMP*VTPSRN
Trigger: GTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGT...GCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS CCA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTaGCAGGGAGCAAGTGGCAGACAGCACCCCTCTCTCCCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: LPFPGHTKFGTSPES*QGASGRQHPSLPSH
Trigger: GTGGCTAGGGAGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419497.5
CDS-3UTR CAA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGGCCCCAGATGTTCCCTaGTGGTGCCAGCAATCCCAG +
Preference number: 5 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEAPDVP*WCQQSQ
Trigger: CTGGGATTGCTGGCACCACAAGGGAACATCTGGGGC...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGTTCCTCCTGCTCTTaGCTGTTGGTGAGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKSSSCS*LLVSGG
Trigger: GCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACT...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGACCATCACCATGCCCTaGCGAAGCAGTGCACGGTCA +
Preference number: 5 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKTITMP*RSSARS
Trigger: TGACCGTGCACTGCTTCGCAAGGGCATGGTGATGGT...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp TGTACATCAGTGACATGGCCGATGCCCTTGGTGACACCCTCCCGGAACAGCAGTATGCCAAGCCTTTGCTaGGTAGCCCCACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: CTSVTWPMPLVTPSRNSSMPSLC*VAPRLG
Trigger: GCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCAT...ACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS TCA 90 bp TTAAAGCCCAGGATCTCGAAGCTGATGCTGGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGGAAAAGGTTGAGCCGAGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LKPRISKLMLEVRPD*ISCRWRKRLSRARP
Trigger: GGGCCGGGCTCGGCTCAACCTTTTCCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTCGAGATCCTGGGCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS-3UTR CAA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCATCCGGTGCAGGGTCTaGAGCGAAGCTCGCATTTCC +
Preference number: 5 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSIRCRV*SEARIS
Trigger: GGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGAT...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp TCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCGACAGGCAGAGCGGTaGCGCTGGATGCTGCATACT +
Preference number: 5 (lower is better)
Translates to: SWPHQVWHLSRKLAGSKWRQAER*RWMLHT
Trigger: AGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCG...CCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTCGACAGGCAGAGCGGTaGCGCTGGATGCTGCATACT +
Preference number: 5 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCRQAER*RWMLHT
Trigger: AGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCG...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS TCA 90 bp CAGGTCCCTCTCACCTTGGCATGGATCTTTTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGTACTGTCACCTGGAATCCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: QVPLTLAWIFSTTAV*RTLPTCTVTWNPRR
Trigger: CCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGTGAGAGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS GCA 90 bp GGAAGGCCAGGTCCCTCTCACCTTGGCATGGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCCCACGTGTACTGTCACCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: GRPGPSHLGMDLFHH*RLTYVAHVYCHLES
Trigger: GGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGTGAGAGGGACCTGGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS-3UTR CAA 90 bp CCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCAGACACCAGCAATCCCAGTGTaGGCACTGACGAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PHQVWHLSRKLAGSKWQTPAIPV*ALTRSR
Trigger: CCTGCTCCTCGTCAGTGCCAACACTGGGATTGCTGG...TGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp AGGACTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCACGACAGGCAGAGCGGTaGCGCTGGATGCTGCATACT +
Preference number: 5 (lower is better)
Translates to: RTALSWPHQVWHLSRKLARQAER*RWMLHT
Trigger: AGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCG...TGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACCATCACCATGCCCTaGCGAAGCAGTGCACGGTCA +
Preference number: 5 (lower is better)
Translates to: RLWAATTTRWPRADNLLSTITMP*RSSARS
Trigger: TGACCGTGCACTGCTTCGCAAGGGCATGGTGATGGT...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CTGCCCTTTCCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAACCATCACCATGCCCTaGCGAAGCAGTGCACGGTCA +
Preference number: 5 (lower is better)
Translates to: LPFPGHTKFGTSPESWQGTITMP*RSSARS
Trigger: TGACCGTGCACTGCTTCGCAAGGGCATGGTGATGGT...TCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp GTCCCTGTGCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGTCGCCTGTCCGCAGTTaGTCCTTGGCATGGATCTTT +
Preference number: 5 (lower is better)
Translates to: VPVPFLQTLGRHHHQMAKSPVRS*SLAWIF
Trigger: AAAGATCCATGCCAAGGACAAACTGCGGACAGGCGA...CTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCAGACAGGCCACAGGGTaGCCAGGTTTGATGAGCCAA +
Preference number: 5 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSRQATG*PGLMSQ
Trigger: TTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCT...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGATGCCAAGCCTTTGCTaGGTAGCCCCACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRMPSLC*VAPRLG
Trigger: GCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCAT...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS TCA 90 bp GTCCGCAGTTTGTCCTTGGCATGGATCTTTTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGTACTGTCACCTGGAATCCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: VRSLSLAWIFSTTAV*RTLPTCTVTWNPRR
Trigger: CCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000476510.5
ENST00000496137.5
CDS TCA 90 bp GATCAAGGAGTTCTCTGCCAGTCTGGGGCAGGCCTCCCTCTTTTCTaGCCTCTGGAGAAATGGAAGGCCAGGTCCCTCTCACCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: DQGVLCQSGAGLPLF*PLEKWKARSLSPWH
Trigger: ATGCCAAGGTGAGAGGGACCTGGCCTTCCATTTCTCCAGAGGTCAGAAAAGAGGGAGGCCTGCCCCAGACTGGCAGAGAACTCCTTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS GCA 90 bp TGTCCTTGGCATGGATCTTTTCCACCACTGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CPWHGSFPPLPSDVR*PRVLSPGILVGRWW
Trigger: CCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000476510.5
ENST00000496137.5
CDS GCA 90 bp CTCGCCTGTCCGCAGTTTGTCCTTGGCATGGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCCCACGTGTACTGTCACCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: LACPQFVLGMDLFHH*RLTYVAHVYCHLES
Trigger: GGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGACAGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000476510.5
ENST00000496137.5
CDS GCA 90 bp TCACCTTGGCATGGATCTTTTCCACCACTGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SPWHGSFPPLPSDVR*PRVLSPGILVGRWW
Trigger: CCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CCA 90 bp GAGTTCTCTGCCAGTCTGGGGCAGGCCTCCCTCTTTTCTGACCTCTaGAGAAATGGAAGGCCAGGTCCCTCTCACCTTGGCATGGATCTT +
Preference number: 5 (lower is better)
Translates to: EFSASLGQASLFSDL*RNGRPGPSHLGMDL
Trigger: AAGATCCATGCCAAGGTGAGAGGGACCTGGCCTTCCATTTCTCCAGAGGTCAGAAAAGAGGGAGGCCTGCCCCAGACTGGCAGAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CCA 90 bp GCTCTCCACCCTCCAGAGGCCTATCAGGCCGCTACCCACCCTAAGTaGGGTTTTATTCCCATTGTGGGATCAAGGAGTTCTCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: ALHPPEAYQAATHPK*GFIPIVGSRSSLPV
Trigger: GACTGGCAGAGAACTCCTTGATCCCACAATGGGAATAAAACCCCACTTAGGGTGGGTAGCGGCCTGATAGGCCTCTGGAGGGTGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CCA 90 bp CCCCCATCCTATGTCCTTCACTACTACCATCCCATCCTCAGAGTCTaGCCCCATTGGGTCCCATTGATCCCATGCACCTCTCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPSYVLHYYHPILRV*PHWVPLIPCTSPLL
Trigger: CAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCTGAGGATGGGATGGTAGTAGTGAAGGACATAGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS-3UTR CAA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGGCCCCAGATGTTCCCTaGTGGTGCCAGCAATCCCAG +
Preference number: 5 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWAPDVP*WCQQSQ
Trigger: CTGGGATTGCTGGCACCACAAGGGAACATCTGGGGC...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTAACCAGCATGGGGACCTaGTGGCAGCCAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVTSMGT*WQPGCL
Trigger: CAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGT...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCGACAGGCAGAGCGGTaGCGCTGGATGCTGCATACT +
Preference number: 5 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLRQAER*RWMLHT
Trigger: AGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCG...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp GCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCTCGCCTGTCCGCAGTTaGTCCTTGGCATGGATCTTT +
Preference number: 5 (lower is better)
Translates to: ANQVSTQLRSTALNPVFSSPVRS*SLAWIF
Trigger: AAAGATCCATGCCAAGGACAAACTGCGGACAGGCGA...GGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp GCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCATCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: ASAQGGNTTIHCPCAISSSRNSS*APTFRY
Trigger: GTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...TGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp AGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: SQPGEHTASEHCPESCLLTGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...GAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LPSLLTHRAANGRAAWPETGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp GCCATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAAGACAGGCCACAGGGTaGCCAGGTTTGATGAGCCAA +
Preference number: 5 (lower is better)
Translates to: AISSDSGPPPPPDGQEQIRQATG*PGLMSQ
Trigger: TTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCT...TATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAAATGCCAAGCCTTTGCTaGGTAGCCCCACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQMPSLC*VAPRLG
Trigger: GCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCAT...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS GCA 90 bp CATCCCATCCTCAGAGTCTGGCCCCATTGGGTCCCATTGATCCCATaGACCTCTCCCTTGCTGTTAAAGCCCAGGATCTCGAAGCTGATG +
Preference number: 5 (lower is better)
Translates to: HPILRVWPHWVPLIP*TSPLLLKPRISKLM
Trigger: CATCAGCTTCGAGATCCTGGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCTGAGGATGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS-3UTR CAA 90 bp GGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCGCACATAGGTCGATCTaGCTGACCACGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLPGLMSQPGEHTASEHCAHRSI*LTTMKK
Trigger: CTTCTTCATCGTGGTCAGCAAGATCGACCTATGTGC...GCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAACTCTCCACTGTGGTCTaGGCACATAGGTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: LPSLLTHRAANGRAAWPELSTVV*AHRSIL
Trigger: CAAGATCGACCTATGTGCCAAGACCACAGTGGAGAG...TTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GTATATGCCAAGCCTTTGCTTGGTAGCCCCACGCCTGGGCCAGCACAACAAATAAGTTCCTCCTGCTCTTaGCTGTTGGTGAGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: VYAKPLLGSPTPGPAQQISSSCS*LLVSGG
Trigger: GCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACT...TATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTACCATCACCATGCCCTaGCGAAGCAGTGCACGGTCA +
Preference number: 5 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLTITMP*RSSARS
Trigger: TGACCGTGCACTGCTTCGCAAGGGCATGGTGATGGT...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp GGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCGTCCGCAGTTTGTCCTaGGCATGGATCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: GLMSQPGEHTASEHCPESVRSLS*AWIFST
Trigger: GGTGGAAAAGATCCATGCCAAGGACAAACTGCGGAC...GGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYSRNSS*APTFRY
Trigger: GTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp CAACCAGGTGAGCACACAGCTTCGGAGCACTGCCCTGAATCCTGTCTTCTCCCTCTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: QPGEHTASEHCPESCLLPLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...AGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFTGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: ATGLPGLMSQPGEHTASESGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CCTGGCCACACCAAGTTTGGCACCTCTCCAGAAAGTTGGCAGGGAGCAAGTGGCGAAAAAGGAGTGCTTTaGAGGGCTACCCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: PGHTKFGTSPESWQGASGEKGVL*RATPCC
Trigger: ACAACAGGGGGTAGCCCTCAAAAGCACTCCTTTTTC...GCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp AAGAGGCCTCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCATGCAGCTGGCCTTaGGTATATGCCAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: KRPQASAQGGNTTIHCPCACSWP*VYAKPL
Trigger: CAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGC...ACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGAGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS CCA 90 bp CGTTGCCCACGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTATCTCTGCCTCAAACACCGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RCPRVLSPGILVGRW*HGTVRLSLPQTPSR
Trigger: TCTGCTCGGTGTTTGAGGCAGAGATAGTCTTACTGTTCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
ENST00000496137.5
CDS CCA 90 bp GTACGTTGCCCACGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGACTATCTCTGCCTCAAACACCGAGC +
Preference number: 5 (lower is better)
Translates to: VRCPRVLSPGILVGR*WHGTVRLSLPQTPS
Trigger: GCTCGGTGTTTGAGGCAGAGATAGTCTTACTGTTCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
ENST00000496137.5
CDS-3UTR CAA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGCCCACCAGCAGCCCATaGTCCTCTACCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVPTSSP*SSTPIW
Trigger: CCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGG...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATATCCGGTGCAGGGTCTaGAGCGAAGCTCGCATTTCC +
Preference number: 5 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDIRCRV*SEARIS
Trigger: GGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGAT...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAAAAAGGTGGCGGAAAAGGTaGAGCCGAGCCCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GKVKHLIQHESQHDRRGKRWRKR*SRARPR
Trigger: GCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCACCT...TTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp TCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTCTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SSDSGPPPPPDGQEQITFLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...AAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTACAGGGTTGCCAGGTTaGATGAGCCAACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLTGLPG*MSQPGE
Trigger: CTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGT...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: RLWAATTTRWPRADNLLSSGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...GGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AGACAGCACCCCTCTCTCCCTAGCCTATTAACACACAGAGCCGCCAATGGCAGGGAAAAAGGAGTGCTTTaGAGGGCTACCCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RQHPSLPSLLTHRAANGREKGVL*RATPCC
Trigger: ACAACAGGGGGTAGCCCTCAAAAGCACTCCTTTTTC...CCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS GCA 90 bp CACCTTCAGGTACTCTGGGTGTTTCAGGAAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAGTTTGTCCTTGGCATGGATCTTTTC +
Preference number: 5 (lower is better)
Translates to: HLQVLWVFQEAETYH*LLACPQFVLGMDLF
Trigger: GAAAAGATCCATGCCAAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 90 bp TATGTCCTTCACTACTACCATCCCATCCTCAGAGTCTGGCCCCATTaGGTCCCATTGATCCCATGCACCTCTCCCTTGCTGTTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: YVLHYYHPILRVWPH*VPLIPCTSPLLLKP
Trigger: GGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCTGAGGATGGGATGGTAGTAGTGAAGGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS-3UTR CAA 90 bp ATTTCTTCAGACTCTGGGCCGCCACCACCACCAGATGGCCAAGAGCAGATAACCGCACATAGGTCGATCTaGCTGACCACGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ISSDSGPPPPPDGQEQITAHRSI*LTTMKK
Trigger: CTTCTTCATCGTGGTCAGCAAGATCGACCTATGTGC...GGTTATCTGCTCTTGGCCATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CCCAGTCTTAGTAGTGGGGACGAAGAATTGATGAGTGGATCCAGTCAGCTCCGGTCCTGCTCTTTGCTGTaGGTGAGTGGCGGCAGAATA +
Preference number: 5 (lower is better)
Translates to: PSLSSGDEELMSGSSQLRSCSLL*VSGGRI
Trigger: TATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGA...CCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTACTAAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTAGACAGGCCACAGGGTaGCCAGGTTTGATGAGCCAA +
Preference number: 5 (lower is better)
Translates to: KTRLMGMQLAFGICQAFARQATG*PGLMSQ
Trigger: TTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCT...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CACCAGTCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCATGCCAAGCCTTTGCTaGGTAGCCCCACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: HQSGKVKHLIQHESQHDRMPSLC*VAPRLG
Trigger: GCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCAT...GCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGGCATGCAGCTGGCCTTaGGTATATGCCAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PPDGQEQITFCPQPGRDGACSWP*VYAKPL
Trigger: CAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGC...CCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTCAGGTCCCTCTCACCTaGGCATGGATCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: KTRLMGMQLAFGICQAFAQVPLT*AWIFST
Trigger: GGTGGAAAAGATCCATGCCAAGGTGAGAGGGACCTG...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS TCA 90 bp CTAGGAACTGTTGGTTGTCAGGGACCTTTCGTACTAGCACCTCGGTaGTCTTCCGGGGCATGTCGCTATCATAATCCACTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: LGTVGCQGPFVLAPR*SSGACRYHNPLLAL
Trigger: GAGAGCGAGAAGTGGATTATGATAGCGACATGCCCCGGAAGATCACCGAGGTGCTAGTACGAAAGGTCCCTGACAACCAACAGTTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS GCA 90 bp AACCTTCAGGTACTCTGGGTGTTTCAGGAAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAGTTTGTCCTTGGCATGGATCTTTTC +
Preference number: 5 (lower is better)
Translates to: NLQVLWVFQEAETYH*LLACPQFVLGMDLF
Trigger: GAAAAGATCCATGCCAAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS CCA 90 bp CGTCAGCTGCTGCATGAGTTCCTCCTGCTCTTTGCTGTTGGTGAGTaGCGGCAGAATATTCAGAAAGACTTTGAGGAGGTCCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: RQLLHEFLLLFAVGE*RQNIQKDFEEVQTL
Trigger: GAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS-3UTR CAA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGACTCCAAGCAGAGTaGACTTCCCAGAGTCCACAT +
Preference number: 5 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDGLQAE*TSQSPH
Trigger: ATGTGGACTCTGGGAAGTCAACTCTGCTTGGAGTCC...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GCCACAGGGTTGCCAGGTTTGATGAGCCAACCAGGTGAGCACACAGCTTCGGAGATATTCAGAAAGACTTaGAGGAGGTCCAGACTCTCT +
Preference number: 5 (lower is better)
Translates to: ATGLPGLMSQPGEHTASEIFRKT*RRSRLS
Trigger: AGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATAT...CTCCGAAGCTGTGTGCTCACCTGGTTGGCTCATCAAACCTGGCAACCCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTCAGATCCTGCTCTTTGCTGTaGGTGAGTGGCGGCAGAATA +
Preference number: 5 (lower is better)
Translates to: LSTGWQHYHSLSLCHFFRSCSLL*VSGGRI
Trigger: TATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGA...TCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CCACCACCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGTCCGCAGTTTGTCCTaGGCATGGATCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: PPPDGQEQITFCPQPGRDVRSLS*AWIFST
Trigger: GGTGGAAAAGATCCATGCCAAGGACAAACTGCGGAC...ATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp CCAGATGGCCAAGAGCAGATAACCTTTTGTCCACAGCCAGGTAGAGATGGGCAACTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: PDGQEQITFCPQPGRDGQLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...TTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AACATGACCGCAGAGGAAAAAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: NMTAEEKDQTDGHAAGLWSGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...CCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTGAAAAAGGAGTGCTTTaGAGGGCTACCCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLEKGVL*RATPCC
Trigger: ACAACAGGGGGTAGCCCTCAAAAGCACTCCTTTTTC...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCGGGGTTTTATTCCCATaGTGGGATCAAGGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFGVLFP*WDQGVL
Trigger: GAGAACTCCTTGATCCCACAATGGGAATAAAACCCC...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS GCA 90 bp TCACCACGTCCCTCCTGGAGCCGCCACTTCATTTGTGTCACCAGGTaGTCAAAGCGGTACTGGGATGGATTCACCAGCTTCAATTTATAT +
Preference number: 5 (lower is better)
Translates to: SPRPSWSRHFICVTR*SKRYWDGFTSFNLY
Trigger: ATATAAATTGAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
CDS-3UTR CAA 90 bp AGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCTTATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATC +
Preference number: 5 (lower is better)
Translates to: RPQHRVATLPFTVPVPFLMKVII*ELLSQI
Trigger: GATCTGTGAGAGCAGCTCCAAGATGATCACCTTCAT...AAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGCTCTCCACTGTGGTCTaGGCACATAGGTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVLSTVV*AHRSIL
Trigger: CAAGATCGACCTATGTGCCAAGACCACAGTGGAGAG...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTTCCCGGAACAGCAGTTaGGCGCCCACCTTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: ATYMALRRGIEKGVLLRASRNSS*APTFRY
Trigger: GTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGA...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp AAGACCAGACTGATGGGCATGCAGCTGGCCTTTGGTATATGCCAAGCCTTTGCTAGTGGGGACGAAGAATaGATGAGTGGATCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: KTRLMGMQLAFGICQAFASGDEE*MSGSSQ
Trigger: CTGACTGGATCCACTCATCAATTCTTCGTCCCCACT...AGCAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp CCATTCCTGAAGTGCAGAGACCACACCAGCAAAACATGCCCAGTCTTAGTAGTGGCATGCAGCTGGCCTTaGGTATATGCCAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PFLKCRDHTSKTCPVLVVACSWP*VYAKPL
Trigger: CAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGC...CACTACTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS GCA 90 bp ATTTCATCCACCTGGAACTCCGTCAGCTGCTGCATGAGTTCCTCCTaGTCTTTGCTGTTGGTGAGTGGCGGCAGAATATTCAGAAAGACT +
Preference number: 5 (lower is better)
Translates to: ISSTWNSVSCCMSSS*SLLLVSGGRIFRKT
Trigger: AGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCAGGTGGATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS-3UTR CAA 90 bp TTAACACACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATTCTAGGAACTGTTGGTaGTCAGGGACCTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: LTHRAANGRAAWPEVTLYSRNCW*SGTFRT
Trigger: AGTACGAAAGGTCCCTGACAACCAACAGTTCCTAGA...ATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp CACAGAGCCGCCAATGGCAGGGCAGCATGGCCAGAAGTCACCTTATATATTGTAATGAAGGTGATCATCTaGGAGCTGCTCTCACAGATC +
Preference number: 5 (lower is better)
Translates to: HRAANGRAAWPEVTLYIVMKVII*ELLSQI
Trigger: GATCTGTGAGAGCAGCTCCAAGATGATCACCTTCAT...TACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp TCAGGCCTCAGCACAGGGTGGCAACACTACCATTCACTGTCCCTGTGCCATTTCATATTCAGAAAGACTTaGAGGAGGTCCAGACTCTCT +
Preference number: 5 (lower is better)
Translates to: SGLSTGWQHYHSLSLCHFIFRKT*RRSRLS
Trigger: AGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATAT...GAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAGGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp AGAAGTGGGCTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAATAGTCCGCAGTTTGTCCTaGGCATGGATCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: RSGLLTILTTSKWPTLQIVRSLS*AWIFST
Trigger: GGTGGAAAAGATCCATGCCAAGGACAAACTGCGGAC...TATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAGCCCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CAA 90 bp GCAACTTACATGGCCTTGAGAAGAGGTATAGAAAAAGGAGTGCTTTTGAGGGCTTCGCCTGTCCGCAGTTaGTCCTTGGCATGGATCTTT +
Preference number: 5 (lower is better)
Translates to: ATYMALRRGIEKGVLLRASPVRS*SLAWIF
Trigger: AAAGATCCATGCCAAGGACAAACTGCGGACAGGCGA...AGCCCTCAAAAGCACTCCTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp TCTGGGAAAGTAAAACATTTGATCCAGCATGAAAGCCAACATGACCGCAGAGGAGCATGCAGCTGGCCTTaGGTATATGCCAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SGKVKHLIQHESQHDRRGACSWP*VYAKPL
Trigger: CAAAGGCTTGGCATATACCAAAGGCCAGCTGCATGC...TCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTACTTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS-3UTR CAA 90 bp ATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCATGGCCAGCAATCCCAGTGTaGGCACTGACGAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IYIYMHRETLANKSLSPWPAIPV*ALTRSR
Trigger: CCTGCTCCTCGTCAGTGCCAACACTGGGATTGCTGG...CCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307114.11
ENST00000307126.10
CDS-3UTR CAA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCAACATGGCCGATGCCCTaGGTGACACCCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: CIYIYMHRETLANKSLSPTWPMP*VTPSRN
Trigger: GTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGT...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000432918.5
CDS-3UTR CAA 90 bp CTCCTTACTATTCTGACCACTAGCAAGTGGCCAACTCTTCAAATACAGGGTAGCTTCCTGGGGTGGGCTTaGCAATTTACATATCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLTILTTSKWPTLQIQGSFLGWA*QFTYQL
Trigger: CAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAA...GCTACCCTGTATTTGAAGAGTTGGCCACTTGCTAGTGGTCAGAATAGTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CAA 90 bp TTTCTTTCTTTATTCCTGGGGTGGGCTTTGCAATTTACATATCAGCTGCTCTTTTCGCCTGTCCGCAGTTaGTCCTTGGCATGGATCTTT +
Preference number: 5 (lower is better)
Translates to: FLSLFLGWALQFTYQLLFSPVRS*SLAWIF
Trigger: AAAGATCCATGCCAAGGACAAACTGCGGACAGGCGA...AAAGAGCAGCTGATATGTAAATTGCAAAGCCCACCCCAGGAATAAAGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CAA 90 bp TTCTACTCTTCTTTAAGTAGCTGGCACTGTATCTCTGCCAGGGCACAGAAGTGGAATAGGCCACAATACTaGGTTACAATACTGGAACTC +
Preference number: 5 (lower is better)
Translates to: FYSSLSSWHCISARAQKWNRPQY*VTILEL
Trigger: GAGTTCCAGTATTGTAACCAAGTATTGTGGCCTATT...CCACTTCTGTGCCCTGGCAGAGATACAGTGCCAGCTACTTAAAGAAGAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS TCA 90 bp GGTAGCTACCTATTTCACGTGAAAGGCCTCAGTATTCTGCTCACTTaGACTACGGAAAATAGGCCACAATACTTGGTTACAATACTGGAA +
Preference number: 5 (lower is better)
Translates to: GSYLFHVKGLSILLT*TTENRPQYLVTILE
Trigger: TTCCAGTATTGTAACCAAGTATTGTGGCCTATTTTCCGTAGTTCAAGTGAGCAGAATACTGAGGCCTTTCACGTGAAATAGGTAGCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5
CDS-3UTR CAA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCAGTCCGCAGTTTGTCCTaGGCATGGATCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: CIYIYMHRETLANKSLSPVRSLS*AWIFST
Trigger: GGTGGAAAAGATCCATGCCAAGGACAAACTGCGGAC...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
CDS-3UTR CAA 90 bp TGTATATATATATATATGCACAGAGAAACCTTAGCCAACAAATCCCTGAGTCCACTGGCCACACCAAGTTaGGCACCTCTCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: CIYIYMHRETLANKSLSPLATPS*APLQKV
Trigger: AACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAG...TGGACTCAGGGATTTGTTGGCTAAGGTTTCTCTGTGCATATATATATATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
CDS GCA 72 bp GAGGTGACCAGCATGGGGACCTTGTGGCAGCCAGGCTaGTTGAGGACCCGCTCCAGCTGGCGTACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: EVTSMGTLWQPG*LRTRSSWRTVL
Trigger: GAGGACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 72 bp TGGCGGAAAAGGTTGAGCCGAGCCCGGCCCCGCCCATaGTCCAGCTCTCCCTGGGTCAGGACTCCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: WRKRLSRARPRP*SSSPWVRTPSR
Trigger: TCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS GCA 72 bp GTCACTCCCCTGGCCAGTGCCTTCTGTCCCATTCTCTaGCAGCCGTGGCTCTCCACCCTCCAGAGGCCTATC +
Preference number: 6 (lower is better)
Translates to: VTPLASAFCPIL*QPWLSTLQRPI
Trigger: GATAGGCCTCTGGAGGGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAAGGCACTGGCCAGGGGAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CCA 72 bp CTGGCCAGTGCCTTCTGTCCCATTCTCTGCCAGCCGTaGCTCTCCACCCTCCAGAGGCCTATCAGGCCGCTA +
Preference number: 6 (lower is better)
Translates to: LASAFCPILCQP*LSTLQRPIRPL
Trigger: TAGCGGCCTGATAGGCCTCTGGAGGGTGGAGAGCCACGGCTGGCAGAGAATGGGACAGAAGGCACTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CAA 90 bp TCCTCAGAGGTGACCAGCATGGGGACCTTGTGGCAGCCAGGCTGCTaGAGGACCCGCTCCAGCTGGCGTACTGTCCTCTCCACTGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSEVTSMGTLWQPGC*RTRSSWRTVLSTVV
Trigger: GACCACAGTGGAGAGGACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 90 bp GCAGCAGTGACGGCATCATCCTCAGAGGTGACCAGCATGGGGACCTaGTGGCAGCCAGGCTGCTTGAGGACCCGCTCCAGCTGGCGTACT +
Preference number: 6 (lower is better)
Translates to: AAVTASSSEVTSMGT*WQPGCLRTRSSWRT
Trigger: AGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACCTCTGAGGATGATGCCGTCACTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 90 bp TCATGCAGGTGGCGGAAAAGGTTGAGCCGAGCCCGGCCCCGCCCATaGTCCAGCTCTCCCTGGGTCAGGACTCCAAGCAGAGTTGACTTC +
Preference number: 6 (lower is better)
Translates to: SCRWRKRLSRARPRP*SSSPWVRTPSRVDF
Trigger: GAAGTCAACTCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGCTCGGCTCAACCTTTTCCGCCACCTGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS TCA 72 bp CTGCCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTTaGGCGAAGCTCGCATTTCCTCCTCAGCCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: LPQPSLPSGAGS*AKLAFPPQPAP
Trigger: TGGGGCTGGCTGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
CDS GCA 72 bp CCTGACCAGCTCGCAGCACACGACAGGCAGAGCGGTTaGGCTGGATGCTGCATACTCTCAGCTCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: PDQLAAHDRQSG*AGCCILSAPGS
Trigger: GCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAGCTGGTCAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS CCA 72 bp CCAGCTCGCAGCACACGACAGGCAGAGCGGTTGCGCTaGATGCTGCATACTCTCAGCTCCAGGAAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PARSTRQAERLR*MLHTLSSRKQP
Trigger: TGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAGCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS CAA 72 bp TCTGCCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTaGAGCGAAGCTCGCATTTCCTCCTCAGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SAPTFSAIRCRV*SEARISSSASP
Trigger: GGGGCTGGCTGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
CDS CAA 90 bp ACGGTTATGTCTGCCCCAACCTTCTCTGCCATCCGGTGCAGGGTCTaGAGCGAAGCTCGCATTTCCTCCTCAGCCAGCCCCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TVMSAPTFSAIRCRV*SEARISSSASPTSS
Trigger: GCTGCTGGTGGGGCTGGCTGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATAACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
CDS TCA 72 bp GTCCAGCTCTCCCTGGGTCAGGACTCCAAGCAGAGTTaGCTTCCCAGAGTCCACATTCCCCAGGACGGCCAC +
Preference number: 6 (lower is better)
Translates to: VQLSLGQDSKQS*LPRVHIPQDGH
Trigger: GTGGCCGTCCTGGGGAATGTGGACTCTGGGAAGTCAACTCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS GCA 72 bp GCAGCACACGACAGGCAGAGCGGTTGCGCTGGATGCTaGATACTCTCAGCTCCAGGAAGCAGCCATCATCCG +
Preference number: 6 (lower is better)
Translates to: AAHDRQSGCAGC*ILSAPGSSHHP
Trigger: CGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS CCA 72 bp AGGAAGCAGCCATCATCCGTGGGGCCCACCACCAGCTaGTCCCCCTCACGGCAAATCCCACTGGAAAGTGTT +
Preference number: 6 (lower is better)
Translates to: RKQPSSVGPTTS*SPSRQIPLESV
Trigger: AACACTTTCCAGTGGGATTTGCCGTGAGGGGGACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 72 bp GCCAGTCTGGGGCAGGCCTCCCTCTTTTCTGACCTCTaGAGAAATGGAAGGCCAGGTCCCTCTCACCTTGGC +
Preference number: 6 (lower is better)
Translates to: ASLGQASLFSDL*RNGRPGPSHLG
Trigger: GCCAAGGTGAGAGGGACCTGGCCTTCCATTTCTCCAGAGGTCAGAAAAGAGGGAGGCCTGCCCCAGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CAA 72 bp GGCCTCACCACGTCCCTCCTGGAGCCGCCACTTCATTaGTGTCACCAGGTGCTCAAAGCGGTACTGGGATGG +
Preference number: 6 (lower is better)
Translates to: GLTTSLLEPPLH*CHQVLKAVLGW
Trigger: CCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
CDS GCA 72 bp CTCGCAGCACACGACAGGCAGAGCGGTTGCGCTGGATaGTGCATACTCTCAGCTCCAGGAAGCAGCCATCAT +
Preference number: 6 (lower is better)
Translates to: LAAHDRQSGCAG*CILSAPGSSHH
Trigger: ATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
CDS CAA 90 bp CTGGTAGACGGCCTCACCACGTCCCTCCTGGAGCCGCCACTTCATTaGTGTCACCAGGTGCTCAAAGCGGTACTGGGATGGATTCACCAG +
Preference number: 6 (lower is better)
Translates to: LVDGLTTSLLEPPLH*CHQVLKAVLGWIHQ
Trigger: CTGGTGAATCCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGAGGCCGTCTACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
CDS CAA 90 bp TGGCGTACTGTCCTCTCCACTGTGGTCTTGGCACATAGGTCGATCTaGCTGACCACGATGAAGAAGGGCACTTTCAGGGCCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: WRTVLSTVVLAHRSI*LTTMKKGTFRARAS
Trigger: GCTGGCCCTGGCCCTGAAAGTGCCCTTCTTCATCGTGGTCAGCAAGATCGACCTATGTGCCAAGACCACAGTGGAGAGGACAGTACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
ENST00000480263.1
CDS TCA 72 bp GTTCTCTGCCAGTCTGGGGCAGGCCTCCCTCTTTTCTaGCCTCTGGAGAAATGGAAGGCCAGGTCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: VLCQSGAGLPLF*PLEKWKARSLS
Trigger: TGAGAGGGACCTGGCCTTCCATTTCTCCAGAGGTCAGAAAAGAGGGAGGCCTGCCCCAGACTGGCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CAA 90 bp AGAGTCTGGCCCCATTGGGTCCCATTGATCCCATGCACCTCTCCCTaGCTGTTAAAGCCCAGGATCTCGAAGCTGATGCTGGAGGTTCGG +
Preference number: 6 (lower is better)
Translates to: RVWPHWVPLIPCTSP*LLKPRISKLMLEVR
Trigger: CCGAACCTCCAGCATCAGCTTCGAGATCCTGGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS GCA 72 bp CCCTCCTGGAGCCGCCACTTCATTTGTGTCACCAGGTaGTCAAAGCGGTACTGGGATGGATTCACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: PSWSRHFICVTR*SKRYWDGFTSF
Trigger: GAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
CDS GCA 72 bp ACGGTTATGTCTGCCCCAACCTTCTCTGCCATCCGGTaGAGGGTCTTGAGCGAAGCTCGCATTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: TVMSAPTFSAIR*RVLSEARISSS
Trigger: TGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATAACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
CDS CAA 72 bp CATCCCATCCTCAGAGTCTGGCCCCATTGGGTCCCATaGATCCCATGCACCTCTCCCTTGCTGTTAAAGCCC +
Preference number: 6 (lower is better)
Translates to: HPILRVWPHWVP*IPCTSPLLLKP
Trigger: GGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCTGAGGATGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS CAA 90 bp CACTACTACCATCCCATCCTCAGAGTCTGGCCCCATTGGGTCCCATaGATCCCATGCACCTCTCCCTTGCTGTTAAAGCCCAGGATCTCG +
Preference number: 6 (lower is better)
Translates to: HYYHPILRVWPHWVP*IPCTSPLLLKPRIS
Trigger: CGAGATCCTGGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGGCCAGACTCTGAGGATGGGATGGTAGTAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS TCA 72 bp AGGATCTCGAAGCTGATGCTGGAGGTTCGGCCAGACTaGATCTCATGCAGGTGGCGGAAAAGGTTGAGCCGA +
Preference number: 6 (lower is better)
Translates to: RISKLMLEVRPD*ISCRWRKRLSR
Trigger: TCGGCTCAACCTTTTCCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTCGAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS GCA 72 bp CATGGATCTTTTCCACCACTGCCGTCTGACGTACGTTaGCCACGTGTACTGTCACCTGGAATCCTCGTCGGA +
Preference number: 6 (lower is better)
Translates to: HGSFPPLPSDVR*PRVLSPGILVG
Trigger: TCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
ENST00000496137.5
CDS GCA 72 bp CCGCAGTTTGTCCTTGGCATGGATCTTTTCCACCACTaGCGTCTGACGTACGTTGCCCACGTGTACTGTCAC +
Preference number: 6 (lower is better)
Translates to: PQFVLGMDLFHH*RLTYVAHVYCH
Trigger: GTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000476510.5
ENST00000496137.5
CDS GCA 72 bp GTACTCTGGGTGTTTCAGGAAGCGGAAACGTACCACTaGCTTCTCGCCTGTCCGCAGTTTGTCCTTGGCATG +
Preference number: 6 (lower is better)
Translates to: VLWVFQEAETYH*LLACPQFVLGM
Trigger: CATGCCAAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
ENST00000496137.5
CDS CAA 72 bp CCCCATTGGGTCCCATTGATCCCATGCACCTCTCCCTaGCTGTTAAAGCCCAGGATCTCGAAGCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: PHWVPLIPCTSP*LLKPRISKLML
Trigger: CAGCATCAGCTTCGAGATCCTGGGCTTTAACAGCAAGGGAGAGGTGCATGGGATCAATGGGACCCAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480263.1
CDS TCA 72 bp CTCACCTTGGCATGGATCTTTTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGTACTGTCACCTGGAAT +
Preference number: 6 (lower is better)
Translates to: LTLAWIFSTTAV*RTLPTCTVTWN
Trigger: ATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CCA 72 bp CCTCCAGAGGCCTATCAGGCCGCTACCCACCCTAAGTaGGGTTTTATTCCCATTGTGGGATCAAGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: PPEAYQAATHPK*GFIPIVGSRSS
Trigger: AGAACTCCTTGATCCCACAATGGGAATAAAACCCCACTTAGGGTGGGTAGCGGCCTGATAGGCCTCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432918.5
CDS CAA 72 bp GGCCTCACCACGTCCCTCCTGGAGCCGCCACTTCATTaGTGTCACCAGGTGCTCAAAGCGGTATTTATATTC +
Preference number: 6 (lower is better)
Translates to: GLTTSLLEPPLH*CHQVLKAVFIF
Trigger: GAATATAAATACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452781.1
CDS TCA 72 bp TTGTCCTTGGCATGGATCTTTTCCACCACTGCCGTCTaGCGTACGTTGCCCACGTGTACTGTCACCTGGAAT +
Preference number: 6 (lower is better)
Translates to: LSLAWIFSTTAV*RTLPTCTVTWN
Trigger: ATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000476510.5
ENST00000496137.5
CDS CCA 72 bp CCACGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTaGTGGCATGGAACAGTAAGACTATCTCTGCCTCAA +
Preference number: 6 (lower is better)
Translates to: PRVLSPGILVGR*WHGTVRLSLPQ
Trigger: TTGAGGCAGAGATAGTCTTACTGTTCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
ENST00000496137.5
CDS CCA 72 bp CTGGAGCTCAAGACCCACACTTCTCTCTCAGGGGCCTaGAGATTCCCCAATAGGCAGCAATACTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LELKTHTSLSGA*RFPNRQQYCFF
Trigger: GAAGAAACAGTATTGCTGCCTATTGGGGAATCTCCAGGCCCCTGAGAGAGAAGTGTGGGTCTTGAGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459959.1
CDS CAA 90 bp TGGAACTCCGTCAGCTGCTGCATGAGTTCCTCCTGCTCTTTGCTGTaGGTGAGTGGCGGCAGAATATTCAGAAAGACTTTGAGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: WNSVSCCMSSSCSLL*VSGGRIFRKTLRRS
Trigger: GGACCTCCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 90 bp TCCACCTGGAACTCCGTCAGCTGCTGCATGAGTTCCTCCTGCTCTTaGCTGTTGGTGAGTGGCGGCAGAATATTCAGAAAGACTTTGAGG +
Preference number: 6 (lower is better)
Translates to: STWNSVSCCMSSSCS*LLVSGGRIFRKTLR
Trigger: CCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 90 bp CTGGTAGACGGCCTCACCACGTCCCTCCTGGAGCCGCCACTTCATTaGTGTCACCAGGTGCTCAAAGCGGTATTTATATTCAATGTTTCC +
Preference number: 6 (lower is better)
Translates to: LVDGLTTSLLEPPLH*CHQVLKAVFIFNVS
Trigger: GGAAACATTGAATATAAATACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGGACGTGGTGAGGCCGTCTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452781.1
CDS TCA 72 bp GTTGGTTGTCAGGGACCTTTCGTACTAGCACCTCGGTaGTCTTCCGGGGCATGTCGCTATCATAATCCACTT +
Preference number: 6 (lower is better)
Translates to: VGCQGPFVLAPR*SSGACRYHNPL
Trigger: AAGTGGATTATGATAGCGACATGCCCCGGAAGATCACCGAGGTGCTAGTACGAAAGGTCCCTGACAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000452781.1
ENST00000476510.5
ENST00000480263.1
CDS CCA 72 bp CGTGTACTGTCACCTGGAATCCTCGTCGGAAGGTGGTaGCATGGAACAGTAAGACTATCTCTGCCTCAAACA +
Preference number: 6 (lower is better)
Translates to: RVLSPGILVGRW*HGTVRLSLPQT
Trigger: TGTTTGAGGCAGAGATAGTCTTACTGTTCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000419497.5
ENST00000432918.5
ENST00000476510.5
ENST00000496137.5
CDS CAA 72 bp CTGTTGGTGAGTGGCGGCAGAATATTCAGAAAGACTTaGAGGAGGTCCAGACTCTCTCCAGACACACTGGAC +
Preference number: 6 (lower is better)
Translates to: LLVSGGRIFRKT*RRSRLSPDTLD
Trigger: GTCCAGTGTGTCTGGAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 72 bp AACTCCGTCAGCTGCTGCATGAGTTCCTCCTGCTCTTaGCTGTTGGTGAGTGGCGGCAGAATATTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: NSVSCCMSSSCS*LLVSGGRIFRK
Trigger: CTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 72 bp ACTGGAAAGTGTTCCTCCAACAACAGTCCCCACCTCTaGTACTGTGTAGATTTCATCCACCTGGAACTCCGT +
Preference number: 6 (lower is better)
Translates to: TGKCSSNNSPHL*YCVDFIHLELR
Trigger: ACGGAGTTCCAGGTGGATGAAATCTACACAGTACCAGAGGTGGGGACTGTTGTTGGAGGAACACTTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 72 bp GTCAGCTGCTGCATGAGTTCCTCCTGCTCTTTGCTGTaGGTGAGTGGCGGCAGAATATTCAGAAAGACTTTG +
Preference number: 6 (lower is better)
Translates to: VSCCMSSSCSLL*VSGGRIFRKTL
Trigger: CAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CAA 90 bp TGCTCTTTGCTGTTGGTGAGTGGCGGCAGAATATTCAGAAAGACTTaGAGGAGGTCCAGACTCTCTCCAGACACACTGGACAATGTGAAG +
Preference number: 6 (lower is better)
Translates to: CSLLLVSGGRIFRKT*RRSRLSPDTLDNVK
Trigger: CTTCACATTGTCCAGTGTGTCTGGAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAACAGCAAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000476510.5
CDS CCA 72 bp AAGGCCAGCAGTGATGGTGGACAGAGAGACACTTGCTaGTTTAACAACACCGAACACCTAATCACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: KASSDGGQRDTC*FNNTEHLITEG
Trigger: TCCTTCAGTGATTAGGTGTTCGGTGTTGTTAAACCAGCAAGTGTCTCTCTGTCCACCATCACTGCTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459959.1
CDS GCA 72 bp CCCTCCTGGAGCCGCCACTTCATTTGTGTCACCAGGTaGTCAAAGCGGTATTTATATTCAATGTTTCCATCT +
Preference number: 6 (lower is better)
Translates to: PSWSRHFICVTR*SKRYLYSMFPS
Trigger: AGATGGAAACATTGAATATAAATACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCCAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452781.1
CDS CCA 72 bp CACTTCATTTGTGTCACCAGGTGCTCAAAGCGGTACTaGGATGGATTCACCAGCTTCAATTTATATTCAATG +
Preference number: 6 (lower is better)
Translates to: HFICVTRCSKRY*DGFTSFNLYSM
Trigger: CATTGAATATAAATTGAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307114.11
ENST00000307126.10
ENST00000442748.5
ENST00000476510.5
CDS TCA 72 bp CTATTTCACGTGAAAGGCCTCAGTATTCTGCTCACTTaGACTACGGAAAATAGGCCACAATACTTGGTTACA +
Preference number: 6 (lower is better)
Translates to: LFHVKGLSILLT*TTENRPQYLVT
Trigger: TGTAACCAAGTATTGTGGCCTATTTTCCGTAGTTCAAGTGAGCAGAATACTGAGGCCTTTCACGTGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496137.5