RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTPBP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000105793

Ensembl transcript IDs: ENST00000222511.11, ENST00000257659.12, ENST00000380058.7, ENST00000417207.5, ENST00000421719.5, ENST00000426366.5, ENST00000439832.5, ENST00000450619.5, ENST00000453512.5, ENST00000469675.1, ENST00000477972.1

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAAGATATACAAGGACAGTAGGTCCTGTCTGTTCTCTTCAACATaGCACATACAGCACCTTGGACAGTGCCTGATACAGGACATTGCT +
Preference number: 1 (lower is better)
Translates to: GKIYKDSRSCLFSST*HIQHLGQCLIQDIA
Trigger: AGCAATGTCCTGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAGGACCTACTGTCCTTGTATATCTTGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR CCA 90 bp ATTCTGGAGCTGGCTCATCAATTCATGGAACTTATCTTGGGCATCTaGCAAGTCCATTTTATTAACTGCCAAGAGTGCAGGTTTTGTCTG +
Preference number: 1 (lower is better)
Translates to: ILELAHQFMELILGI*QVHFINCQECRFCL
Trigger: CAGACAAAACCTGCACTCTTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR TCA 90 bp GTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTaGTACAGGACATTGCTCAATAAATACATCAGCAATGAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: VCSLQHGTYSTLDSA*YRTLLNKYISNEEK
Trigger: TTTTTCTTCATTGCTGATGTATTTATTGAGCAATGTCCTGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR GCA 90 bp TTCATGGAACTTATCTTGGGCATCTGGCAAGTCCATTTTATTAACTaGCAAGAGTGCAGGTTTTGTCTGAAGTTCCTCTTTGTACAATTC +
Preference number: 1 (lower is better)
Translates to: FMELILGIWQVHFIN*QECRFCLKFLFVQF
Trigger: GAATTGTACAAAGAGGAACTTCAGACAAAACCTGCACTCTTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CCA 90 bp AAATGCAGAAAATCTTTAGGATTCTGGAGCTGGCTCATCAATTCATaGAACTTATCTTGGGCATCTGGCAAGTCCATTTTATTAACTGCC +
Preference number: 1 (lower is better)
Translates to: KCRKSLGFWSWLINS*NLSWASGKSILLTA
Trigger: GGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTTTCTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR TCA 90 bp AATAATCCTGAACACACATCTACTACCCTTTGCCACAGTGCAAAATaGGATTATGGTGTCAGTACTTCTGATATTCACCTGATGAAACTG +
Preference number: 1 (lower is better)
Translates to: NNPEHTSTTLCHSAK*DYGVSTSDIHLMKL
Trigger: CAGTTTCATCAGGTGAATATCAGAAGTACTGACACCATAATCTCATTTTGCACTGTGGCAAAGGGTAGTAGATGTGTGTTCAGGATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR TCA 90 bp TACCCTTTGCCACAGTGCAAAATGAGATTATGGTGTCAGTACTTCTaGTATTCACCTGATGAAACTGTCCTTACATTGATACTTGTTTAC +
Preference number: 1 (lower is better)
Translates to: YPLPQCKMRLWCQYF*YSPDETVLTLILVY
Trigger: GTAAACAAGTATCAATGTAAGGACAGTTTCATCAGGTGAATATCAGAAGTACTGACACCATAATCTCATTTTGCACTGTGGCAAAGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR TCA 90 bp GAAGACATTGTATCAGAAATCCACAAATTAAGCAACTGTTTCTTATaGAGTGCATCATTTTCCTGGTTGGCCTGTTCATCCAGTGACTTT +
Preference number: 1 (lower is better)
Translates to: EDIVSEIHKLSNCFL*SASFSWLACSSSDF
Trigger: AAAGTCACTGGATGAACAGGCCAACCAGGAAAATGATGCACTTCATAAGAAACAGTTGCTTAATTTGTGGATTTCTGATACAATGTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CCA 90 bp ACAAAAAGTAGTTGTCTAGTTCTTTCTATATGCTTGAGGAATTTGTaGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGA +
Preference number: 1 (lower is better)
Translates to: TKSSCLVLSICLRNL*PIPLFICAPSIKPG
Trigger: TCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAACTAGACAACTACTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR TCA 90 bp GGGAATCCTACTAGGCCTACATCAGCTATAAGTTTTAGATCAAGGTaGATTATTCGTTTCTGGCCTTTCAATGGTAAGAAATTTGTAAGT +
Preference number: 1 (lower is better)
Translates to: GNPTRPTSAISFRSR*IIRFWPFNGKKFVS
Trigger: ACTTACAAATTTCTTACCATTGAAAGGCCAGAAACGAATAATTCACCTTGATCTAAAACTTATAGCTGATGTAGGCCTAGTAGGATTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421719.5
3UTR GCA 90 bp CCAGAAATATCAACAACAAAAAGTAGTTGTCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCT +
Preference number: 1 (lower is better)
Translates to: PEISTTKSSCLVLSI*LRNLWPIPLFICAP
Trigger: AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAACTAGACAACTACTTTTTGTTGTTGATATTTCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGTGGCCAGGCTGGTCTTaGACTCCTGACCTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWWPGWS*TPDLKW
Trigger: CCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTAGGGTCTTGCTATGTTaGTCAGGCATGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCRVLLC*SGMNSW
Trigger: CCAGGAGTTCATGCCTGAGCAACATAGCAAGACCCT...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGATGTACCGCTATGTCTaGCCTGCACCACCATGCCTG +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWMYRYV*PAPPCL
Trigger: CAGGCATGGTGGTGCAGGCCAGACATAGCGGTACAT...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGGCAGGAGAATTGCTTaGACCAGGGAATCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWGRRIA*TRESEA
Trigger: AGCCTCTGATTCCCTGGTTCAAGCAATTCTCCTGCC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTTTCAAGCAATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCFKQFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATTGCTTGAA...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCCCGCTATGTCTGGCCTaGACCACCATGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSPLCLA*TTMPGL
Trigger: CAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGCTGCACCACCATGCCTaGCCTGCACTTGCTATTTAT +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWLHHHA*PALAIY
Trigger: ATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAG...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCCCGCTATGTCTGGCCTaGACCACCATGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSPLCLA*TTMPGL
Trigger: CAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACAAGGCATGAGCCACCATaGCTGGCCACTGGTTATTTT +
Preference number: 2 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTRHEPP*LATGYF
Trigger: AAAATAACCAGTGGCCAGGCATGGTGGCTCATGCCT...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCCTCAAGTGGTCTTCCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSLKWSS*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGAAGACCACTTGAG...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTTACCCTTTGCCACAGTaGAAAATGAGATTATGGTGT +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCYPLPQ*KMRLWC
Trigger: ACACCATAATCTCATTTTGCACTGTGGCAAAGGGTA...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTGCTACAGTTTTAAAGTaGATCTGTGCTGTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCATVLK*ICAVAL
Trigger: CAAAGCAACAGCACAGATGCACTTTAAAACTGTAGC...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGTGCCTGGCCTGCACTTaGTATTTATTCTCTCTTTAC +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWCLACT*YLFSLY
Trigger: GTAAAGAGAGAATAAATAGCAAGTGCAGGCCAGGCA...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTCTCTGCAAGAACTACTaGGACTTTGTAAAAATTTGC +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCLCKNY*DFVKIC
Trigger: GCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAG...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTAAATCTTTAGGATTCTaGAGCTGGCTCATCAATTCA +
Preference number: 2 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCKSLGF*SWLINS
Trigger: TGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTT...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTATGTTGCTCAGGCATaGACTCCTGGGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: INHFPWEELRGLMQKGSFYVAQA*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCATGCCTGAGCAACATA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGAGTGCAGGTTTTGTCTaGAGTTCCTCTTTGTACAAT +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWSAGFV*SSSLYN
Trigger: ATTGTACAAAGAGGAACTTCAGACAAAACCTGCACT...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR CCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGAATGTTATTACAGGTaGGCTGGCCATAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWECYYR*AGHKLV
Trigger: TACAAGTTTATGGCCAGCCCACCTGTAATAACATTC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATCTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: SSTAPPALDNHHSILSFYLKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
3UTR-3UTR TCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACATGCCACAGTGCAAAATaGGATTATGGTGTCAGTACT +
Preference number: 2 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTCHSAK*DYGVST
Trigger: AGTACTGACACCATAATCTCATTTTGCACTGTGGCA...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACATCCTTCTCCAGTAACTaGAGATATGGGGATGATATG +
Preference number: 2 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTSFSSN*RYGDDM
Trigger: CATATCATCCCCATATCTGCAGTTACTGGAGAAGGA...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACACTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTLKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR TCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTCTGCAGATATGGGGATaGTATGTTGGAACTCTACAG +
Preference number: 2 (lower is better)
Translates to: INHFPWEELRGLMQKGSFLQIWG*YVGTLQ
Trigger: CTGTAGAGTTCCAACATATCATCCCCATATCTGCAG...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGCCACCAAGACCTCCTTaGGCTACCAAAATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLPPRPP*ATKILS
Trigger: TGACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGG...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
3UTR CAA 90 bp ATCTTTAGGATTCTGGAGCTGGCTCATCAATTCATGGAACTTATCTaGGGCATCTGGCAAGTCCATTTTATTAACTGCCAAGAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: IFRILELAHQFMELI*GIWQVHFINCQECR
Trigger: CCTGCACTCTTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGCCACCAAGACCTCCTTaGGCTACCAAAATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: APSIKPGRSATDICLKSLPPRPP*ATKILS
Trigger: TGACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGG...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
3UTR-3UTR TCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCCTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSLKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTATGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR GCA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 2 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR CCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTATTAATCATTTTCCCTaGGAAGAACTGAGGGGCCTA +
Preference number: 2 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGINHFP*EELRGL
Trigger: TAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCTCCACAGTGAGATTATaGAGCATTTGTCTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSSTVRL*SICLSK
Trigger: CTTAGAAAGACAAATGCTGCATAATCTCACTGTGGA...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCCCTGATACAGGACATTaGTCAATAAATACATCAGCA +
Preference number: 2 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSPDTGH*SINTSA
Trigger: TGCTGATGTATTTATTGAGCAATGTCCTGTATCAGG...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTGCACATACAGCACCTTaGACAGTGCCTGATACAGGA +
Preference number: 2 (lower is better)
Translates to: LDMITSTDHVLEQDFWICAHTAP*TVPDTG
Trigger: TCCTGTATCAGGCACTGTCCAAGGTGCTGTATGTGC...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR CAA 90 bp TGTCTAGTTCTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACT +
Preference number: 2 (lower is better)
Translates to: CLVLSICLRNLWPIP*FICAPSIKPGRSAT
Trigger: AGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAACTAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR TCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 2 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR TCA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 2 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR GCA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPLVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR GCA 90 bp CTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 2 (lower is better)
Translates to: LCSYVLLLLNPEDQLLISCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...AGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR GCA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 2 (lower is better)
Translates to: APSIKPGRSATDICLKSLCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR GCA 90 bp CTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LCSYVLLLLNPEDQLLISLVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...AGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR CCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTCTGTTCTCTTCAACATaGCACATACAGCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: LDMITSTDHVLEQDFWICLFSST*HIQHLG
Trigger: TCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAG...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR TCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTGTACAACAGATCTCTTaGACTCAGTTGCCTTGTCTA +
Preference number: 2 (lower is better)
Translates to: LDMITSTDHVLEQDFWICVQQIS*TQLPCL
Trigger: TAGACAAGGCAACTGAGTTCAAGAGATCTGTTGTAC...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTCCACAGTGAGATTATaGAGCATTTGTCTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LLITVTKLYNRSLELSCLSTVRL*SICLSK
Trigger: CTTAGAAAGACAAATGCTGCATAATCTCACTGTGGA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
3UTR-3UTR GCA 90 bp TTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 2 (lower is better)
Translates to: LFICAPSIKPGRSATDICCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...ACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR GCA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 2 (lower is better)
Translates to: FICAPSIKPGRSATDICLCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
3UTR-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTGCTACAGTTTTAAAGTaGATCTGTGCTGTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LDMITSTDHVLEQDFWICATVLK*ICAVAL
Trigger: CAAAGCAACAGCACAGATGCACTTTAAAACTGTAGC...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATGAATGTTATTACAGGTaGGCTGGCCATAAACTTGTA +
Preference number: 2 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNECYYR*AGHKLV
Trigger: TACAAGTTTATGGCCAGCCCACCTGTAATAACATTC...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR CAA 90 bp GAAATATCAACAACAAAAAGTAGTTGTCTAGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: EISTTKSSCLVLSIC*RNLWPIPLFICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAACTAGACAACTACTTTTTGTTGTTGATATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR GCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATTATTATAGAAAGCTCTaGAAGAACTACTGGGACTTT +
Preference number: 2 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNYYRKL*KNYWDF
Trigger: AAAGTCCCAGTAGTTCTTGCAGAGCTTTCTATAATA...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGTACAACAGATCTCTaGAACTCAGTTGCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: ARITGMYRYVWPAPPCLACTTDL*NSVALS
Trigger: AGACAAGGCAACTGAGTTCAAGAGATCTGTTGTACA...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGCAGGGTCTTGCTATGTaGCTCAGGCATGAACTCCTG +
Preference number: 3 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWQGLAM*LRHELL
Trigger: CAGGAGTTCATGCCTGAGCAACATAGCAAGACCCTG...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 3 (lower is better)
Translates to: PLCLACTTMPGLHLLFILNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 3 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CCA 72 bp TACAAGGACAGTAGGTCCTGTCTGTTCTCTTCAACATaGCACATACAGCACCTTGGACAGTGCCTGATACAG +
Preference number: 3 (lower is better)
Translates to: YKDSRSCLFSST*HIQHLGQCLIQ
Trigger: CTGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAGGACCTACTGTCCTTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 3 (lower is better)
Translates to: SSTAPPALDNHHSILSFYNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
3UTR-3UTR CAA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATGAGGAAGTCTCCCTCTaGTCCTCCAGGCTGGAGTGC +
Preference number: 3 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNEEVSL*SSRLEC
Trigger: GCACTCCAGCCTGGAGGACAAGAGGGAGACTTCCTC...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGATCTGCCAACACTTTTaGTCCACTGTTTATCTCATT +
Preference number: 3 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWICQHF*STVYLI
Trigger: AATGAGATAAACAGTGGACAAAAAGTGTTGGCAGAT...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGACCACCAAGACCTCCTaGAGCTACCAAAATTCTGTC +
Preference number: 3 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQTTKTS*SYQNSV
Trigger: GACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGGT...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
3UTR-3UTR CAA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: INHFPWEELRGLMQKGSFLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
3UTR-3UTR CAA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGAGGATTTTCCAGCATTaGGGAATCCTACTAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLRIFQH*GILLGL
Trigger: TAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCT...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421719.5
3UTR-3UTR CAA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTATGCCTGGCCTGCACTaGCTATTTATTCTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGMPGLH*LFILSL
Trigger: TAAAGAGAGAATAAATAGCAAGTGCAGGCCAGGCAT...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR-3UTR CAA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: APSIKPGRSATDICLKSLLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
3UTR-3UTR CAA 90 bp TTGCATGAGAAACACAACTTAGCAAAGAGGATTTTCCAGCATTTGGGAATCCTAACCACCAAGACCTCCTaGAGCTACCAAAATTCTGTC +
Preference number: 3 (lower is better)
Translates to: LHEKHNLAKRIFQHLGILTTKTS*SYQNSV
Trigger: GACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGGT...TAGGATTCCCAAATGCTGGAAAATCCTCTTTGCTAAGTTGTGTTTCTCATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
3UTR TCA 72 bp GAACACACATCTACTACCCTTTGCCACAGTGCAAAATaGGATTATGGTGTCAGTACTTCTGATATTCACCTG +
Preference number: 3 (lower is better)
Translates to: EHTSTTLCHSAK*DYGVSTSDIHL
Trigger: CAGGTGAATATCAGAAGTACTGACACCATAATCTCATTTTGCACTGTGGCAAAGGGTAGTAGATGTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR GCA 72 bp CTTATCTTGGGCATCTGGCAAGTCCATTTTATTAACTaGCAAGAGTGCAGGTTTTGTCTGAAGTTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: LILGIWQVHFIN*QECRFCLKFLF
Trigger: AAAGAGGAACTTCAGACAAAACCTGCACTCTTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR CAA 90 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 3 (lower is better)
Translates to: LSICLRNLWPIPLFICAPNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR CAA 90 bp TATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: YMLEEFVAHSFVHMCSFYLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...ATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR CAA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGCTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 3 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLLQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421719.5
3UTR-3UTR CAA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 3 (lower is better)
Translates to: IPLFICAPSIKPGRSATDICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR CAA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 3 (lower is better)
Translates to: FICAPSIKPGRSATDICLICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR-3UTR CAA 90 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 3 (lower is better)
Translates to: LSICLRNLWPIPLFICAPVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
3UTR CCA 72 bp AAATCTTTAGGATTCTGGAGCTGGCTCATCAATTCATaGAACTTATCTTGGGCATCTGGCAAGTCCATTTTA +
Preference number: 3 (lower is better)
Translates to: KSLGFWSWLINS*NLSWASGKSIL
Trigger: TAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR-3UTR CAA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTGTACAACAGATCTCTaGAACTCAGTTGCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: LDMITSTDHVLEQDFWICCTTDL*NSVALS
Trigger: AGACAAGGCAACTGAGTTCAAGAGATCTGTTGTACA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR TCA 72 bp CCACAGTGCAAAATGAGATTATGGTGTCAGTACTTCTaGTATTCACCTGATGAAACTGTCCTTACATTGATA +
Preference number: 3 (lower is better)
Translates to: PQCKMRLWCQYF*YSPDETVLTLI
Trigger: TATCAATGTAAGGACAGTTTCATCAGGTGAATATCAGAAGTACTGACACCATAATCTCATTTTGCACTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR TCA 72 bp ACTAGGCCTACATCAGCTATAAGTTTTAGATCAAGGTaGATTATTCGTTTCTGGCCTTTCAATGGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: TRPTSAISFRSR*IIRFWPFNGKK
Trigger: TTTCTTACCATTGAAAGGCCAGAAACGAATAATTCACCTTGATCTAAAACTTATAGCTGATGTAGGCCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
3UTR TCA 72 bp AATTATATCCATTTTGGAAGTAGTAACAGCATGCTTTaGTGGTGGCTCAGTAGAAGACATTGTATCAGAAAT +
Preference number: 3 (lower is better)
Translates to: NYIHFGSSNSML*WWLSRRHCIRN
Trigger: ATTTCTGATACAATGTCTTCTACTGAGCCACCATCAAAGCATGCTGTTACTACTTCCAAAATGGATATAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CAA 72 bp CCCAGGCTGAAGTGCAGTGGCGCGACCTCGGGTTCATaGTATCCTCCACCTCCCGCGTTCAAGCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: PRLKCSGATSGS*YPPPPAFKQFS
Trigger: GGAGAATTGCTTGAACGCGGGAGGTGGAGGATACAATGAACCCGAGGTCGCGCCACTGCACTTCAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCGCAATGCACCATGGCTaGAACAGGCCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ARITGMYRYVWPAPPCLAAMHHG*NRPGNL
Trigger: AAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGC...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp CATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTCTCAAGTGGTCTTCCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HVPLCLACTTMPGLHLLFLKWSS*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGAAGACCACTTGAG...AAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTCTCAAGTGGTCTTCCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCLKWSS*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGAAGACCACTTGAG...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTGCAATGCACCATGGCTaGAACAGGCCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCAMHHG*NRPGNL
Trigger: AAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGC...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCTATGTTGCTCAGGCATaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILYVAQA*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCATGCCTGAGCAACATA...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCGCACATACAGCACCTTaGACAGTGCCTGATACAGGA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILAHTAP*TVPDTG
Trigger: TCCTGTATCAGGCACTGTCCAAGGTGCTGTATGTGC...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCCCACCAAGACCTCCTTaGGCTACCAAAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILPPRPP*ATKILS
Trigger: TGACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGG...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR TCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCAATCAGAGGCTGCAGTaGGCCAAGATAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILNQRLQ*AKIMSL
Trigger: CAGTGACATTATCTTGGCTCACTGCAGCCTCTGATT...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTCCCTGGCTTTTTCATaGTTACAAAAGCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ARITGMYRYVWPAPPCLASLAFS*LQKPSE
Trigger: CTCACTTGGCTTTTGTAAGCATGAAAAAGCCAGGGA...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATATGTACCGCTATGTCTaGCCTGCACCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYMYRYV*PAPPCL
Trigger: CAGGCATGGTGGTGCAGGCCAGACATAGCGGTACAT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATCGGATCCTCCCCTGGTaGAGAGTCTTAGCTTATCGA +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYRILPW*RVLAYR
Trigger: TCGATAAGCTAAGACTCTTCACCAGGGGAGGATCCG...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCAGTAACAGCATGCTTTaGTGGTGGCTCAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILSNSML*WWLSRR
Trigger: TCTTCTACTGAGCCACCATCAAAGCATGCTGTTACT...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATGGCAGGAGAATTGCTTaGACCAGGGAATCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYGRRIA*TRESEA
Trigger: AGCCTCTGATTCCCTGGTTCAAGCAATTCTCCTGCC...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTTCTTCAGCTGGCTACTaGCACCCACTCAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCSSAGY*HPLKTK
Trigger: TTTAGTTTTGAGTGGGTGTCAGTAGCCAGCTGAAGA...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGCAGCACCTTGGACAGTaGCTGATACAGGACATTGCT +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWQHLGQ*LIQDIA
Trigger: AGCAATGTCCTGTATCAGGCACTGTCCAAGGTGCTG...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCGCTACAGTTTTAAAGTaGATCTGTGCTGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ARITGMYRYVWPAPPCLAATVLK*ICAVAL
Trigger: CAAAGCAACAGCACAGATGCACTTTAAAACTGTAGC...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTCTTGTCCTCCAGGCTaGAGTGCAATGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYSCPPG*SAMAQS
Trigger: AGATTGCGCCATTGCACTCCAGCCTGGAGGACAAGA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCCTGTTCTCTTCAACATaGCACATACAGCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILLFSST*HIQHLG
Trigger: TCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAG...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCTGCTTTTTCTTCAGCTaGCTACTGACACCCACTCAA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILCFFFS*LLTPTQ
Trigger: TTGAGTGGGTGTCAGTAGCCAGCTGAAGAAAAAGCA...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCGTACAACAGATCTCTTaGACTCAGTTGCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILVQQIS*TQLPCL
Trigger: TAGACAAGGCAACTGAGTTCAAGAGATCTGTTGTAC...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGTGGCCAGGCTGGTCTTaGACTCCTGACCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQWPGWS*TPDLKW
Trigger: CCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp CCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCCCGCTATGTCTGGCCTaGACCACCATGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLFICAPSIKPGRSATDIPLCLA*TTMPGL
Trigger: CAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG...GATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAACTGCAATGCACCATaGCTGCAACAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYNCNAP*LQQARK
Trigger: TTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTTGGTGTCAGTACTTCTaGTATTCACCTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCWCQYF*YSPDET
Trigger: AGTTTCATCAGGTGAATATCAGAAGTACTGACACCA...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTGTCAGAAATGGTAGTTaGAATTGTCCCTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCVRNGS*NCPWLF
Trigger: AAAAAGCCAGGGACAATTTCAACTACCATTTCTGAC...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGGTGATTACTTTCTCTaGAATCTCCCAGGTACCCAA +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWGDYFL*NLPGTQ
Trigger: TTGGGTACCTGGGAGATTTCAGAGAAAGTAATCACC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp CATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTACTAATTTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: HVPLCLACTTMPGLHLLFTNFAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAAATTAGT...AAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTATTATAGAAAGCTCTaGAAGAACTACTGGGACTTT +
Preference number: 4 (lower is better)
Translates to: ARITGMYRYVWPAPPCLAYYRKL*KNYWDF
Trigger: AAAGTCCCAGTAGTTCTTGCAGAGCTTTCTATAATA...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACAAACTGCAATGCACCATaGCTGCAACAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTNCNAP*LQQARK
Trigger: TTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTT...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGAGGCCGCAGAGGGCTATAATCATGCCACTGCACTCCACAGAGAGACCCTGTTGGCTCATCAATTCATaGAACTTATCTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LRPQRAIIMPLHSTERPCWLINS*NLSWAS
Trigger: AGATGCCCAAGATAAGTTCCATGAATTGATGAGCCA...ACAGGGTCTCTCTGTGGAGTGCAGTGGCATGATTATAGCCCTCTGCGGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTGAATGTTATTACAGGTaGGCTGGCCATAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: HVPLCLACTTMPGLHLLFECYYR*AGHKLV
Trigger: TACAAGTTTATGGCCAGCCCACCTGTAATAACATTC...AAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGATTTTCATCAGTTACTaGAATACCCACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWIFISY*NTHRHR
Trigger: CCTGTGCCTGTGGGTATTTCAGTAACTGATGAAAAT...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAGTAACAGCATGCTTTaGTGGTGGCTCAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYSNSML*WWLSRR
Trigger: TCTTCTACTGAGCCACCATCAAAGCATGCTGTTACT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGTACAACAGATCTCTTaGACTCAGTTGCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWVQQIS*TQLPCL
Trigger: TAGACAAGGCAACTGAGTTCAAGAGATCTGTTGTAC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTAACACGCAACTGCAATaGACCATGGCTGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFNTQLQ*TMAATG
Trigger: GCCTGTTGCAGCCATGGTGCATTGCAGTTGCGTGTT...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCGTCCATTTTATTAACTaGCAAGAGTGCAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILVHFIN*QECRFC
Trigger: ACAAAACCTGCACTCTTGGCAGTTAATAAAATGGAC...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTGCCAGGAAACCTTCTTaGGGAAGCGGCACAAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLARKPS*GSGTSR
Trigger: GCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGC...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR GCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTGGGAATTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYWEFAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAATTCCCA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR CCA 90 bp CCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTATTCTCAAATCTTTAGGATTCTaGAGCTGGCTCATCAATTCA +
Preference number: 4 (lower is better)
Translates to: PLCLACTTMPGLHLLFILKSLGF*SWLINS
Trigger: TGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTT...GAGAATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCATGGAGTGGCACCCTaGGCACTACTGACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGHGVAP*ALLTEQ
Trigger: TTGCTCTGTCAGTAGTGCCCAGGGTGCCACTCCATG...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGCTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWLKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGAGGCATGAGCCACCATaGCTGGCCACTGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQRHEPP*LATGYF
Trigger: AAAATAACCAGTGGCCAGGCATGGTGGCTCATGCCT...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTCCGCTATGTCTGGCCTaGACCACCATGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICPLCLA*TTMPGL
Trigger: CAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGG...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATGCTATTCCAATCCCCTaGAGTTTCTGTTATCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYAIPIP*SFCYQR
Trigger: CCTTTGATAACAGAAACTGCAGGGGATTGGAATAGC...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGCTACAGTTTTAAAGTaGATCTGTGCTGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWATVLK*ICAVAL
Trigger: CAAAGCAACAGCACAGATGCACTTTAAAACTGTAGC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTCATGGAACTTATCTTaGGCATCTGGCAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYSWNLS*ASGKSI
Trigger: AATGGACTTGCCAGATGCCCAAGATAAGTTCCATGA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTTAGGATTCTGGAGCTaGCTCATCAATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYLGFWS*LINSWN
Trigger: GTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CCA 90 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTATGTACCGCTATGTCTaGCCTGCACCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LSICLRNLWPIPLFICAPMYRYV*PAPPCL
Trigger: CAGGCATGGTGGTGCAGGCCAGACATAGCGGTACAT...AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGATTGCAGGTTTTGCATaGGAAACACAACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWIAGFA*ETQLSK
Trigger: TTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAAT...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAGTGCAGGTTTTGTCTaGAGTTCCTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYSAGFV*SSSLYN
Trigger: ATTGTACAAAGAGGAACTTCAGACAAAACCTGCACT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYLVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGGTCCATTTTATTAACTaGCAAGAGTGCAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWVHFIN*QECRFC
Trigger: ACAAAACCTGCACTCTTGGCAGTTAATAAAATGGAC...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACACTATCCAGAGAGACATaGAACAACTTTCCAACATCC +
Preference number: 4 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTLSRET*NNFPTS
Trigger: GGATGTTGGAAAGTTGTTGCATGTCTCTCTGGATAG...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp GGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAAACTGCAATGCACCATaGCTGCAACAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GICGPFLCSYVLLLLNPENCNAP*LQQARK
Trigger: TTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTT...TTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTGGCTCATCAATTCATaGAACTTATCTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYWLINS*NLSWAS
Trigger: AGATGCCCAAGATAAGTTCCATGAATTGATGAGCCA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCACATACAGCACCTTaGACAGTGCCTGATACAGGA +
Preference number: 4 (lower is better)
Translates to: LWPIPLFICAPSIKPGRSAHTAP*TVPDTG
Trigger: TCCTGTATCAGGCACTGTCCAAGGTGCTGTATGTGC...TGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp CCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTACCATGGAGTGGCACCCTaGGCACTACTGACAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PSIKPGRSATDICLKSLYHGVAP*ALLTEQ
Trigger: TTGCTCTGTCAGTAGTGCCCAGGGTGCCACTCCATG...GTACAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAACATGAGGAAATCATaGGGGAGTTTTCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYNMRKS*GSFLLH
Trigger: ATGAAGCAGAAAACTCCCCCATGATTTCCTCATGTT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR CCA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTATACCACCAAAGTGGTTaGTGGGCCAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLYHQSG*WANFSI
Trigger: GATGGAGAAATTGGCCCACCAACCACTTTGGTGGTA...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
CDS-3UTR TCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAATTTCCATACTTTCTaGACAACACGCAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYNFHTF*TTRNCN
Trigger: ATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTGGCCAGGCTGGTCTTaGACTCCTGACCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICWPGWS*TPDLKW
Trigger: CCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACATGGTGTCAGTACTTCTaGTATTCACCTGATGAAACT +
Preference number: 4 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTWCQYF*YSPDET
Trigger: AGTTTCATCAGGTGAATATCAGAAGTACTGACACCA...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAAATCAGAGGCTGCAGTaGGCCAAGATAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: LWPIPLFICAPSIKPGRSNQRLQ*AKIMSL
Trigger: CAGTGACATTATCTTGGCTCACTGCAGCCTCTGATT...TGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp GTTCTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTGGCAGGAGAATTGCTTaGACCAGGGAATCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VLSICLRNLWPIPLFICAGRRIA*TRESEA
Trigger: AGCCTCTGATTCCCTGGTTCAAGCAATTCTCCTGCC...AGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTGCAATGCACCATGGCTaGAACAGGCCAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLAMHHG*NRPGNL
Trigger: AAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGC...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTAACACGCAACTGCAATaGACCATGGCTGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLNTQLQ*TMAATG
Trigger: GCCTGTTGCAGCCATGGTGCATTGCAGTTGCGTGTT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATGTCCATTTTATTAACTaGCAAGAGTGCAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYVHFIN*QECRFC
Trigger: ACAAAACCTGCACTCTTGGCAGTTAATAAAATGGAC...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTCCACAGTGAGATTATaGAGCATTTGTCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYSTVRL*SICLSK
Trigger: CTTAGAAAGACAAATGCTGCATAATCTCACTGTGGA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTAGGGTCTTGCTATGTTaGTCAGGCATGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSICLRNLWPIPLFICAPRVLLC*SGMNSW
Trigger: CCAGGAGTTCATGCCTGAGCAACATAGCAAGACCCT...AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAAATCTTTAGGATTCTaGAGCTGGCTCATCAATTCA +
Preference number: 4 (lower is better)
Translates to: SSTAPPALDNHHSILSFYKSLGF*SWLINS
Trigger: TGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCCTGCACCACCATGCCTaGCCTGCACTTGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSLHHHA*PALAIY
Trigger: ATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAG...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCTTTCAGAGACTGAAGTaGGAGGATTCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSFQRLK*EDSMRM
Trigger: CATCCTCATGGAATCCTCCCACTTCAGTCTCTGAAA...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTCTTTTACCACCAAAGTaGTTGGTGGGCCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: WPIPLFICAPSIKPGRSALLPPK*LVGQFL
Trigger: GAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAG...AGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
CDS-3UTR TCA 90 bp CAGGTTTTGCATGAGAAACACAACTTAGCAAAGAGGATTTTCCAGCATTTGGGACCACCAAGACCTCCTTaGGCTACCAAAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QVLHEKHNLAKRIFQHLGPPRPP*ATKILS
Trigger: TGACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGG...TCCCAAATGCTGGAAAATCCTCTTTGCTAAGTTGTGTTTCTCATGCAAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR TCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCTGCAGATATGGGGATaGTATGTTGGAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGLQIWG*YVGTLQ
Trigger: CTGTAGAGTTCCAACATATCATCCCCATATCTGCAG...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTATGTTGCTCAGGCATaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLYVAQA*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCATGCCTGAGCAACATA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTGCCACAGTGCAAAATaGGATTATGGTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFCHSAK*DYGVST
Trigger: AGTACTGACACCATAATCTCATTTTGCACTGTGGCA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACAACTTTGCAAACACTGTaGAACTGCTTGGAAAATAGT +
Preference number: 4 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTTLQTL*NCLENS
Trigger: ACTATTTTCCAAGCAGTTTCACAGTGTTTGCAAAGT...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTCTTACAATTTCTCTTaGCCCCAGAGTGGTACCACT +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGSYNFS*PQSGTT
Trigger: AGTGGTACCACTCTGGGGTCAAGAGAAATTGTAAGA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTAGGCATGAGCCACCATaGCTGGCCACTGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLRHEPP*LATGYF
Trigger: AAAATAACCAGTGGCCAGGCATGGTGGCTCATGCCT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACACCTGATACAGGACATTaGTCAATAAATACATCAGCA +
Preference number: 4 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTPDTGH*SINTSA
Trigger: TGCTGATGTATTTATTGAGCAATGTCCTGTATCAGG...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCAGCACCTTGGACAGTaGCTGATACAGGACATTGCT +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLQHLGQ*LIQDIA
Trigger: AGCAATGTCCTGTATCAGGCACTGTCCAAGGTGCTG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTATCCCTGGCTTTTTCATaGTTACAAAAGCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLSLAFS*LQKPSE
Trigger: CTCACTTGGCTTTTGTAAGCATGAAAAAGCCAGGGA...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCTGCACCACCATGCCTaGCCTGCACTTGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLHHHA*PALAIY
Trigger: ATAAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTATTAATCATTTTCCCTaGGAAGAACTGAGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFINHFP*EELRGL
Trigger: TAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGTGCTTTTTCTTCAGCTaGCTACTGACACCCACTCAA +
Preference number: 4 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLCFFFS*LLTPTQ
Trigger: TTGAGTGGGTGTCAGTAGCCAGCTGAAGAAAAAGCA...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCTCTTGACCCCAGAGTaGTACCACTTCCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLLTPE*YHFLER
Trigger: TCTTTCCAGGAAGTGGTACCACTCTGGGGTCAAGAG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR TCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTATTTTCATCAGTTACTaGAATACCCACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGIFISY*NTHRHR
Trigger: CCTGTGCCTGTGGGTATTTCAGTAACTGATGAAAAT...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTCTGCAGATATGGGGATaGTATGTTGGAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: SICLRNLWPIPLFICAPSLQIWG*YVGTLQ
Trigger: CTGTAGAGTTCCAACATATCATCCCCATATCTGCAG...AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCGTCAGAAATGGTAGTTaGAATTGTCCCTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSVRNGS*NCPWLF
Trigger: AAAAAGCCAGGGACAATTTCAACTACCATTTCTGAC...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTATTTGGAGCCTTTCAGTaGACTAATTTTGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLFGAFQ*TNFAVC
Trigger: GCAAACAGCAAAATTAGTGCACTGAAAGGCTCCAAA...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR GCA 90 bp TTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCATGCCTGGCCTGCACTTaGTATTTATTCTCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LWPIPLFICAPSIKPGRSCLACT*YLFSLY
Trigger: GTAAAGAGAGAATAAATAGCAAGTGCAGGCCAGGCA...TGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp CCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTAAAGTCATTCTGTTCTaGGCTACAACCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: PIPLFICAPSIKPGRSATKVILF*ATTQTS
Trigger: TGATGTCTGGGTTGTAGCCCAGAACAGAATGACTTT...AGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
CDS-3UTR CCA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGTTAGGATTCTGGAGCTaGCTCATCAATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLLGFWS*LINSWN
Trigger: GTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAA...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTCTTGTCCTCCAGGCTaGAGTGCAATGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICSCPPG*SAMAQS
Trigger: AGATTGCGCCATTGCACTCCAGCCTGGAGGACAAGA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTCTGTTCTCTTCAACATaGCACATACAGCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: SICLRNLWPIPLFICAPSLFSST*HIQHLG
Trigger: TCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAG...AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTAATACAAAAATTAGCTaGACGTGGTGGTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGNTKIS*TWWWMP
Trigger: AGGCATCCACCACCACGTCCAGCTAATTTTTGTATT...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTTTTCAGAGACTGAAGTaGGAGGATTCCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: SICLRNLWPIPLFICAPSFQRLK*EDSMRM
Trigger: CATCCTCATGGAATCCTCCCACTTCAGTCTCTGAAA...AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGCACCAAAGTGGTTGGTaGGCCAATTTCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FICAPSIKPGRSATDICLHQSGW*ANFSIS
Trigger: AGAGATGGAGAAATTGGCCCACCAACCACTTTGGTG...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
CDS-3UTR CCA 90 bp GATTTTCCAGCATTTGGGAATCCTACTAGGCCTACATCAGCTATAAGTTTTAGATACCACCAAAGTGGTTaGTGGGCCAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: DFPAFGNPTRPTSAISFRYHQSG*WANFSI
Trigger: GATGGAGAAATTGGCCCACCAACCACTTTGGTGGTA...TCTAAAACTTATAGCTGATGTAGGCCTAGTAGGATTCCCAAATGCTGGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
3UTR CAA 72 bp ATTCTGGAGCTGGCTCATCAATTCATGGAACTTATCTaGGGCATCTGGCAAGTCCATTTTATTAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: ILELAHQFMELI*GIWQVHFINCQ
Trigger: TTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CAA 72 bp TCCTTCTCCAGTAACTGCAGATATGGGGATGATATGTaGGAACTCTACAGTCCTCTCTGGAATCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: SFSSNCRYGDDM*ELYSPLWNHVF
Trigger: AAAAACATGATTCCAGAGAGGACTGTAGAGTTCCAACATATCATCCCCATATCTGCAGTTACTGGAGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGAATTTCCATACTTTCTaGACAACACGCAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQNFHTF*TTRNCN
Trigger: ATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATT...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR TCA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGATTTTCATCAGTTACTaGAATACCCACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: APSIKPGRSATDICLKSLIFISY*NTHRHR
Trigger: CCTGTGCCTGTGGGTATTTCAGTAACTGATGAAAAT...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR TCA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTAATTGCAGGTTTTGCATaGGAAACACAACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLIAGFA*ETQLSK
Trigger: TTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAAT...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCTGCAGATATGGGGATaGTATGTTGGAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLQIWG*YVGTLQ
Trigger: CTGTAGAGTTCCAACATATCATCCCCATATCTGCAG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTGCTTTCATTAACTACTaGAAGGAATCTCTAACCTTC +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFAFINY*KESLTF
Trigger: GAAGGTTAGAGATTCCTTTCAGTAGTTAATGAAAGC...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp GTTCTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTTCTTCAGCTGGCTACTaGCACCCACTCAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VLSICLRNLWPIPLFICASSAGY*HPLKTK
Trigger: TTTAGTTTTGAGTGGGTGTCAGTAGCCAGCTGAAGA...AGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATGGTGATTACTTTCTCTaGAATCTCCCAGGTACCCAA +
Preference number: 4 (lower is better)
Translates to: IPLFICAPSIKPGRSATDGDYFL*NLPGTQ
Trigger: TTGGGTACCTGGGAGATTTCAGAGAAAGTAATCACC...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTTTGGAGCCTTTCAGTaGACTAATTTTGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGFGAFQ*TNFAVC
Trigger: GCAAACAGCAAAATTAGTGCACTGAAAGGCTCCAAA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCATTTGGAGCCTTTCAGTaGACTAATTTTGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LWPIPLFICAPSIKPGRSFGAFQ*TNFAVC
Trigger: GCAAACAGCAAAATTAGTGCACTGAAAGGCTCCAAA...TGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR GCA 90 bp CCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PIPLFICAPSIKPGRSATCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...AGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR GCA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR GCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp GGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAACTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GICGPFLCSYVLLLLNPELVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...TTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR GCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATAGGCATGAGCCACCATaGCTGGCCACTGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNRHEPP*LATGYF
Trigger: AAAATAACCAGTGGCCAGGCATGGTGGCTCATGCCT...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTAGGGTCTTGCTATGTTaGTCAGGCATGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICRVLLC*SGMNSW
Trigger: CCAGGAGTTCATGCCTGAGCAACATAGCAAGACCCT...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp AGCTGGCTCATCAATTCATGGAACTTATCTTGGGCATCTGGCAAGTCCATTTTATACCCTTTGCCACAGTaGAAAATGAGATTATGGTGT +
Preference number: 4 (lower is better)
Translates to: SWLINSWNLSWASGKSILYPLPQ*KMRLWC
Trigger: ACACCATAATCTCATTTTGCACTGTGGCAAAGGGTA...TAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCCTATCCAGAGAGACATaGAACAACTTTCCAACATCC +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSLSRET*NNFPTS
Trigger: GGATGTTGGAAAGTTGTTGCATGTCTCTCTGGATAG...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCAGCATTTGGGAATTTaGTGTTTGCTCCTACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLQHLGI*CLLLLQ
Trigger: CTGGAGTAGGAGCAAACAGCAAATTCCCAAATGCTG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR GCA 90 bp GATTTTCCAGCATTTGGGAATCCTACTAGGCCTACATCAGCTATAAGTTTTAGAAGTTCTCTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: DFPAFGNPTRPTSAISFRSSLAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAGAGAACT...TCTAAAACTTATAGCTGATGTAGGCCTAGTAGGATTCCCAAATGCTGGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR GCA 90 bp TATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATAGTTCTCTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: YMLEEFVAHSFVHMCSFYSSLAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAGAGAACT...ATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439832.5
CDS-3UTR CCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCTTAGGATTCTGGAGCTaGCTCATCAATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSLGFWS*LINSWN
Trigger: GTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAA...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCAATACAAAAATTAGCTaGACGTGGTGGTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPNTKIS*TWWWMP
Trigger: AGGCATCCACCACCACGTCCAGCTAATTTTTGTATT...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp CTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTCAAAGGCACACGACTTaGATAACAGCTATGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCSYVLLLLNPEDQLLISQRHTT*ITAMLH
Trigger: GTGAAGCATAGCTGTTATCCAAGTCGTGTGCCTTTG...AGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGCTTTTACCACCAAAGTaGTTGGTGGGCCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: FICAPSIKPGRSATDICLLLPPK*LVGQFL
Trigger: GAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAG...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
CDS-3UTR TCA 90 bp CCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTATTGCAGGTTTTGCATaGGAAACACAACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: PIPLFICAPSIKPGRSATIAGFA*ETQLSK
Trigger: TTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAAT...AGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR TCA 90 bp TTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: FYMLEEFVAHSFVHMCSFFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...GAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR TCA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCAGTGCAGGTTTTGTCTaGAGTTCCTCTTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPSAGFV*SSSLYN
Trigger: ATTGTACAAAGAGGAACTTCAGACAAAACCTGCACT...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTGTACAACAGATCTCTTaGACTCAGTTGCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLVQQIS*TQLPCL
Trigger: TAGACAAGGCAACTGAGTTCAAGAGATCTGTTGTAC...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTCCAGTTTGTATTTGTaGAACACTCAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGSSLYL*NTQVET
Trigger: AGTTTCTACCTGAGTGTTTCACAAATACAAACTGGA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATGCCACAGTGCAAAATaGGATTATGGTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: FLCSYVLLLLNPEDQLLICHSAK*DYGVST
Trigger: AGTACTGACACCATAATCTCATTTTGCACTGTGGCA...TATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp TCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SICLRNLWPIPLFICAPSLVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR GCA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTCCACAGTGAGATTATaGAGCATTTGTCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGSTVRL*SICLSK
Trigger: CTTAGAAAGACAAATGCTGCATAATCTCACTGTGGA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTGCCTGGCCTGCACTTaGTATTTATTCTCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLCLACT*YLFSLY
Trigger: GTAAAGAGAGAATAAATAGCAAGTGCAGGCCAGGCA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATGCTATTCCAATCCCCTaGAGTTTCTGTTATCAAAGG +
Preference number: 4 (lower is better)
Translates to: YMLEEFVAHSFVHMCSFYAIPIP*SFCYQR
Trigger: CCTTTGATAACAGAAACTGCAGGGGATTGGAATAGC...ATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCTACCCTTTGCCACAGTaGAAAATGAGATTATGGTGT +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSYPLPQ*KMRLWC
Trigger: ACACCATAATCTCATTTTGCACTGTGGCAAAGGGTA...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTATTATGCATGTTATCTaGCAACACTTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: INHFPWEELRGLMQKGSFIMHVI*QHFLST
Trigger: AGTGGACAAAAAGTGTTGGCAGATAACATGCATAAT...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTAAAGTCATTCTGTTCTaGGCTACAACCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLKVILF*ATTQTS
Trigger: TGATGTCTGGGTTGTAGCCCAGAACAGAATGACTTT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCTGGCTCATCAATTCATaGAACTTATCTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSWLINS*NLSWAS
Trigger: AGATGCCCAAGATAAGTTCCATGAATTGATGAGCCA...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCGAATGTTATTACAGGTaGGCTGGCCATAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSECYYR*AGHKLV
Trigger: TACAAGTTTATGGCCAGCCCACCTGTAATAACATTC...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTGGATTTTCCAGCATTTaGGAATTTGCTGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLGFSSI*EFAVCS
Trigger: GGAGCAAACAGCAAATTCCCAAATGCTGGAAAATCC...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR CCA 90 bp TTGCATGAGAAACACAACTTAGCAAAGAGGATTTTCCAGCATTTGGGAATCCTACATGTAGATTTTACTTaGGCAAATTTAGGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: LHEKHNLAKRIFQHLGILHVDFT*ANLGAR
Trigger: CCGCGCTCCTAAATTTGCCCAAGTAAAATCTACATG...TAGGATTCCCAAATGCTGGAAAATCCTCTTTGCTAAGTTGTGTTTCTCATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR CCA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGCATGTAGATTTTACTTaGGCAAATTTAGGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: FICAPSIKPGRSATDICLHVDFT*ANLGAR
Trigger: CCGCGCTCCTAAATTTGCCCAAGTAAAATCTACATG...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
3UTR CAA 72 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCTATTAAACCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSICLRNLWPIP*FICAPSIKPGR
Trigger: TCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR TCA 90 bp TCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTAATTTCCATACTTTCTaGACAACACGCAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: SICLRNLWPIPLFICAPSNFHTF*TTRNCN
Trigger: ATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATT...AGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR TCA 90 bp CCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTACTTCTTTCTATATGCTTaGGGAATTTGTGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: PSIKPGRSATDICLKSLYFFLYA*GICGPF
Trigger: GAATGGGCCACAAATTCCTCAAGCATATAGAAAGAA...GTACAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR TCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATAGTAACAGCATGCTTTaGTGGTGGCTCAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNSNSML*WWLSRR
Trigger: TCTTCTACTGAGCCACCATCAAAGCATGCTGTTACT...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATACTTAAGATTCCACAGTaGGATTATGCAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: FLCSYVLLLLNPEDQLLILKIPQ*DYAAFV
Trigger: GACAAATGCTGCATAATCTCACTGTGGAATCTTAAG...TATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTCCAGTTTGTATTTGTaGAACACTCAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: APSIKPGRSATDICLKSLSSLYL*NTQVET
Trigger: AGTTTCTACCTGAGTGTTTCACAAATACAAACTGGA...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp TTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCGCTTTCATTAACTACTaGAAGGAATCTCTAACCTTC +
Preference number: 4 (lower is better)
Translates to: FYMLEEFVAHSFVHMCSFAFINY*KESLTF
Trigger: GAAGGTTAGAGATTCCTTTCAGTAGTTAATGAAAGC...GAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATCTGGAATATGGGCCATaGACAAAGGAAGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNLEYGP*TKEAFV
Trigger: GACAAAAGCTTCCTTTGTTCATGGCCCATATTCCAG...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTACTAATTTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLTNFAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAAATTAGT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGACTAATTTTGCTGTTTaGTCCTACTCCAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: FICAPSIKPGRSATDICLTNFAV*SYSSHK
Trigger: TTTGTGGCTGGAGTAGGAGCAAACAGCAAAATTAGT...CAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp CCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTACTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PSIKPGRSATDICLKSLYCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...GTACAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR GCA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTCCACAGTGAGATTATaGAGCATTTGTCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: APSIKPGRSATDICLKSLSTVRL*SICLSK
Trigger: CTTAGAAAGACAAATGCTGCATAATCTCACTGTGGA...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp GGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAATTATGCATGTTATCTaGCAACACTTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: GICGPFLCSYVLLLLNPEIMHVI*QHFLST
Trigger: AGTGGACAAAAAGTGTTGGCAGATAACATGCATAAT...TTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCAAATCTTTAGGATTCTaGAGCTGGCTCATCAATTCA +
Preference number: 4 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPKSLGF*SWLINS
Trigger: TGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTT...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTATTAGCCAGGTATGGTaGCACACACTTGTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICISQVW*HTLVVL
Trigger: TAGGACTACAAGTGTGTGCCACCATACCTGGCTAAT...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATATTAGCCAGGTATGGTaGCACACACTTGTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNISQVW*HTLVVL
Trigger: TAGGACTACAAGTGTGTGCCACCATACCTGGCTAAT...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATCAAAGGCACACGACTTaGATAACAGCTATGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNQRHTT*ITAMLH
Trigger: GTGAAGCATAGCTGTTATCCAAGTCGTGTGCCTTTG...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
3UTR CAA 72 bp TCATGTGTGCTCATTTTATTGTTCTTACAATTTCTCTaGACCCCAGAGTGGTACCACTTCCTGGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: SCVLILLFLQFL*TPEWYHFLERF
Trigger: AAATCTTTCCAGGAAGTGGTACCACTCTGGGGTCAAGAGAAATTGTAAGAACAATAAAATGAGCACACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTAATTTCCATACTTTCTaGACAACACGCAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLNFHTF*TTRNCN
Trigger: ATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTATTGCAGGTTTTGCATaGGAAACACAACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLIAGFA*ETQLSK
Trigger: TTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAAT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR TCA 90 bp TATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATATTGCAGGTTTTGCATaGGAAACACAACTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: YMLEEFVAHSFVHMCSFYIAGFA*ETQLSK
Trigger: TTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAAT...ATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 4 (lower is better)
Translates to: LLITVTKLYNRSLELSCLCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATTGTAAATGCGTAATCTaGAATTGCAGGTTTTGCATG +
Preference number: 4 (lower is better)
Translates to: IPLFICAPSIKPGRSATDCKCVI*NCRFCM
Trigger: CATGCAAAACCTGCAATTGCAGATTACGCATTTACA...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR GCA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATCCTGATACAGGACATTaGTCAATAAATACATCAGCA +
Preference number: 4 (lower is better)
Translates to: IPLFICAPSIKPGRSATDPDTGH*SINTSA
Trigger: TGCTGATGTATTTATTGAGCAATGTCCTGTATCAGG...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR GCA 90 bp CTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTATTATAGAAAGCTCTaGAAGAACTACTGGGACTTT +
Preference number: 4 (lower is better)
Translates to: LSICLRNLWPIPLFICAPYYRKL*KNYWDF
Trigger: AAAGTCCCAGTAGTTCTTGCAGAGCTTTCTATAATA...AGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTCATGGAACTTATCTTaGGCATCTGGCAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICSWNLS*ASGKSI
Trigger: AATGGACTTGCCAGATGCCCAAGATAAGTTCCATGA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CCA 90 bp TATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATCTCTGCAAGAACTACTaGGACTTTGTAAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: YMLEEFVAHSFVHMCSFYLCKNY*DFVKIC
Trigger: GCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAG...ATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
3UTR CAA 72 bp CATGTCCTCCAGGTTGTCACAGATGAAAGGATTTCCTaGTTTTTAAGCATTAAATACTGTTCCATCAATACC +
Preference number: 4 (lower is better)
Translates to: HVLQVVTDERIS*FLSIKYCSINT
Trigger: GGTATTGATGGAACAGTATTTAATGCTTAAAAACAAGGAAATCCTTTCATCTGTGACAACCTGGAGGACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTGCGTAATCTGCAATTaGAGGTTTTGCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICCVICN*RFCMRN
Trigger: GTTTCTCATGCAAAACCTGCAATTGCAGATTACGCA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTCTAGTTCTTTCTATATaGTTGAGGAATTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICLVLSI*LRNLWP
Trigger: GGGCCACAAATTCCTCAAGCATATAGAAAGAACTAG...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATGAAGCTTTTGTCCTTTaGTTTAAACTTTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: IPLFICAPSIKPGRSATDEAFVL*FKLSMH
Trigger: GTGCATTGAAAGTTTAAAGCAAAGGACAAAAGCTTC...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR TCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATACTTTGCAAACACTGTaGAACTGCTTGGAAAATAGT +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNTLQTL*NCLENS
Trigger: ACTATTTTCCAAGCAGTTTCACAGTGTTTGCAAAGT...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTTGGAATTTTTCAGTGTaGAGGTCCAACTTCATAGTA +
Preference number: 4 (lower is better)
Translates to: LDMITSTDHVLEQDFWICWNFSV*RSNFIV
Trigger: TACTATGAAGTTGGACCTGCACACTGAAAAATTCCA...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR GCA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATGAAGCTTTTGTCCTTTaGTTTAAACTTTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNEAFVL*FKLSMH
Trigger: GTGCATTGAAAGTTTAAAGCAAAGGACAAAAGCTTC...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS GCA 90 bp CGCAACTGCAATGCACCATGGCTGCAACAGGCCAGGAAACCTTCTTaGGGAAGCGGCACAAGCCGCAGTACAGCGCGGCCTTTTTACGTC +
Preference number: 5 (lower is better)
Translates to: RNCNAPWLQQARKPS*GSGTSRSTARPFYV
Trigger: GACGTAAAAAGGCCGCGCTGTACTGCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS TCA 90 bp CTCTTTTACCACCAAAGTGGTTGGTGGGCCAATTTCTCCATCTCTTaGTTTCCTCACTATTCCAAGAACGGTAAGGGGCCGGGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: LFYHQSGWWANFSIS*FPHYSKNGKGPGAR
Trigger: GCGCGCGCCCGGCCCCTTACCGTTCTTGGAATAGTGAGGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS GCA 90 bp ATTTCCATACTTTCTGAACAACACGCAACTGCAATGCACCATGGCTaGAACAGGCCAGGAAACCTTCTTGCGGAAGCGGCACAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: ISILSEQHATAMHHG*NRPGNLLAEAAQAA
Trigger: TGCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR CAA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCATGCCTGGCCTGCACTaGCTATTTATTCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ARITGMYRYVWPAPPCLAMPGLH*LFILSL
Trigger: TAAAGAGAGAATAAATAGCAAGTGCAGGCCAGGCAT...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp GCTAGGATTACAGGCATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCCTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 5 (lower is better)
Translates to: ARITGMYRYVWPAPPCLALQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...GGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATGCCTGTAATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTTTCTTACAATTTCTCTaGACCCCAGAGTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: HVPLCLACTTMPGLHLLFFLQFL*TPEWYH
Trigger: GTGGTACCACTCTGGGGTCAAGAGAAATTGTAAGAA...AAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR CAA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACAAGGCAGGAGAATTGCTaGAACCAGGGAATCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTRQENC*NQGIRG
Trigger: GCCTCTGATTCCCTGGTTCAAGCAATTCTCCTGCCT...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CATGTACCGCTATGTCTGGCCTGCACCACCATGCCTGGCCTGCACTTGCTATTTGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 5 (lower is better)
Translates to: HVPLCLACTTMPGLHLLFVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...AAATAGCAAGTGCAGGCCAGGCATGGTGGTGCAGGCCAGACATAGCGGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCGAGGAAGTCTCCCTCTaGTCCTCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSEEVSL*SSRLEC
Trigger: GCACTCCAGCCTGGAGGACAAGAGGGAGACTTCCTC...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTGGCCAGGAAACCTTCTaGCGGAAGCGGCACAAGCCG +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLGQETF*RKRHKP
Trigger: CGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCC...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATCCAGCATTTGGGAATTaGCTGTTTGCTCCTACTCCA +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYPAFGN*LFAPTP
Trigger: TGGAGTAGGAGCAAACAGCAAATTCCCAAATGCTGG...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS CCA 90 bp GCGCGGGCCAATCACAAAGGAAACTCTCCTCTTTTACCACCAAAGTaGTTGGTGGGCCAATTTCTCCATCTCTTGATTTCCTCACTATTC +
Preference number: 5 (lower is better)
Translates to: ARANHKGNSPLLPPK*LVGQFLHLLISSLF
Trigger: GAATAGTGAGGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAGAGGAGAGTTTCCTTTGTGATTGGCCCGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAGGATTTTCCAGCATTaGGGAATCCTACTAGGCCTA +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYRIFQH*GILLGL
Trigger: TAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATTTCATGGAACTTATCTaGGGCATCTGGCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYFMELI*GIWQVH
Trigger: ATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAA...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGAGGCAGGAGAATTGCTaGAACCAGGGAATCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQRQENC*NQGIRG
Trigger: GCCTCTGATTCCCTGGTTCAAGCAATTCTCCTGCCT...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATAAAAGCTGTCCTGTATaGAGTGTGAGAAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYKSCPV*SVRRKL
Trigger: CAGCTTTCTTCTCACACTCAATACAGGACAGCTTTT...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCAGGGTCTTGCTATGTaGCTCAGGCATGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGQGLAM*LRHELL
Trigger: CAGGAGTTCATGCCTGAGCAACATAGCAAGACCCTG...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTGAGTTCTCTTGCTGTTaGCTCCTACTCCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: WPIPLFICAPSIKPGRSAEFSCC*LLLQPQ
Trigger: TTGTGGCTGGAGTAGGAGCAAACAGCAAGAGAACTC...AGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
CDS-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGGAGTTCTCTTGCTGTTaGCTCCTACTCCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQEFSCC*LLLQPQ
Trigger: TTGTGGCTGGAGTAGGAGCAAACAGCAAGAGAACTC...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000439832.5
CDS-3UTR CAA 90 bp TCCTCCACTGCCCCACCAGCCCTTGATAACCACCATTCTATTCTCTCCTTCTATGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 5 (lower is better)
Translates to: SSTAPPALDNHHSILSFYVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...ATAGAAGGAGAGAATAGAATGGTGGTTATCAAGGGCTGGTGGGGCAGTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp CTGTCTGTTCTCTTCAACATGGCACATACAGCACCTTGGACAGTGCCTGATACAAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: LSVLFNMAHTAPWTVPDTNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...TGTATCAGGCACTGTCCAAGGTGCTGTATGTGCCATGTTGAAGAGAACAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTGAGGAAGTCTCCCTCTaGTCCTCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LDMITSTDHVLEQDFWICEEVSL*SSRLEC
Trigger: GCACTCCAGCCTGGAGGACAAGAGGGAGACTTCCTC...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TCAGAGACTGAAGTGGGAGGATTCCATGAGGATGGGAGTTCAAGACCACTCTGGCCCATTAGAATTCACTaGACTAGGGGCTTTTATTTA +
Preference number: 5 (lower is better)
Translates to: SETEVGGFHEDGSSRPLWPIRIH*TRGFYL
Trigger: TAAATAAAAGCCCCTAGTCAAGTGAATTCTAATGGG...CCAGAGTGGTCTTGAACTCCCATCCTCATGGAATCCTCCCACTTCAGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR CAA 90 bp ATTAATCATTTTCCCTGGGAAGAACTGAGGGGCCTAATGCAGAAAGGGAGCTTTTCACAGTCTTTTCCTTaGGAGCCTTTCAGTGCACTA +
Preference number: 5 (lower is better)
Translates to: INHFPWEELRGLMQKGSFSQSFP*EPFSAL
Trigger: TAGTGCACTGAAAGGCTCCAAAGGAAAAGACTGTGA...AAAGCTCCCTTTCTGCATTAGGCCCCTCAGTTCTTCCCAGGGAAAATGATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTTTCATGGAACTTATCTaGGGCATCTGGCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: WPIPLFICAPSIKPGRSAFMELI*GIWQVH
Trigger: ATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAA...AGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp TTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTCAGGGTCTTGCTATGTaGCTCAGGCATGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: LFICAPSIKPGRSATDICQGLAM*LRHELL
Trigger: CAGGAGTTCATGCCTGAGCAACATAGCAAGACCCTG...ACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGTCAAAGGCACACGACTaGGATAACAGCTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQSKAHD*DNSYAS
Trigger: TGAAGCATAGCTGTTATCCAAGTCGTGTGCCTTTGA...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS TCA 90 bp AGTGTTACAGTTCTTAAAGGCAGCGTGTTCAGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGT +
Preference number: 5 (lower is better)
Translates to: SVTVLKGSVFRVCSF*CSDVFRVSSFWWVR
Trigger: ACGAACCCACCAGAAGGAAGAAACTCTGAACACATCTGAACATCAGAAGGAACAAACTCTGAACACGCTGCCTTTAAGAACTGTAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CCA 90 bp GCTTTTCCACACGTAATTATGTTTCTTTCTTCAACAATGAAGCCTTaGACCCTCGTGGTGAGTGTTACAGTTCTTAAAGGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: AFPHVIMFLSSTMKP*TLVVSVTVLKGSVF
Trigger: GAACACGCTGCCTTTAAGAACTGTAACACTCACCACGAGGGTCCAAGGCTTCATTGTTGAAGAAAGAAACATAATTACGTGTGGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS-3UTR CAA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTATTCAGTGCACTAATTTaGCTGTTTGCTCCTACTCCA +
Preference number: 5 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLFSALI*LFAPTP
Trigger: TGGAGTAGGAGCAAACAGCAAAATTAGTGCACTGAA...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR CAA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PFLCSYVLLLLNPEDQLLLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...CAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
CDS-3UTR CAA 90 bp TGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: CGPFLCSYVLLLLNPEDQICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...CTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR CAA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTCAAAGGCACACGACTaGGATAACAGCTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGSKAHD*DNSYAS
Trigger: TGAAGCATAGCTGTTATCCAAGTCGTGTGCCTTTGA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTTTCAGTGCACTAATTTaGCTGTTTGCTCCTACTCCA +
Preference number: 5 (lower is better)
Translates to: PIPLFICAPSIKPGRSATFSALI*LFAPTP
Trigger: TGGAGTAGGAGCAAACAGCAAAATTAGTGCACTGAA...AGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR CAA 90 bp GCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGAAATCACTGTCACAGTCTTTTCCTTaGGAGCCTTTCAGTGCACTA +
Preference number: 5 (lower is better)
Translates to: APSIKPGRSATDICLKSLSQSFP*EPFSAL
Trigger: TAGTGCACTGAAAGGCTCCAAAGGAAAAGACTGTGA...CAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000453512.5
CDS-3UTR CAA 90 bp CGTAATCTGCAATTGCAGGTTTTGCATGAGAAACACAACTTAGCAAAGAGGATTACCACCAAGACCTCCTaGAGCTACCAAAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: RNLQLQVLHEKHNLAKRITTKTS*SYQNSV
Trigger: GACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGGT...AATCCTCTTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAGATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR CAA 90 bp GTTCTTTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTACCACCAAGACCTCCTaGAGCTACCAAAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: VLSICLRNLWPIPLFICATTKTS*SYQNSV
Trigger: GACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGGT...AGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439832.5
CDS-3UTR CAA 90 bp GGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 5 (lower is better)
Translates to: GPFLCSYVLLLLNPEDQLLQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...TAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR CAA 90 bp TGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTCTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 5 (lower is better)
Translates to: WPIPLFICAPSIKPGRSALQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...AGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR CAA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TCCAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTTGTACAACAGATCTCTaGAACTCAGTTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SNPLQFLLSKARYTRTVGCTTDL*NSVALS
Trigger: AGACAAGGCAACTGAGTTCAAGAGATCTGTTGTACA...ACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCATCATGTAGATTTTACTaGGGCAAATTTAGGAGCGCG +
Preference number: 5 (lower is better)
Translates to: LWPIPLFICAPSIKPGRSSCRFY*GKFRSA
Trigger: CGCGCTCCTAAATTTGCCCAAGTAAAATCTACATGA...TGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421719.5
ENST00000453512.5
CDS GCA 90 bp CTGGTGAAGAGTCTTAGCTTATCGATGAAATTTCCATACCTCATATaGAATCCACCTCCAAGTCGTGGGAAACACTCATGTAGATTTTAC +
Preference number: 5 (lower is better)
Translates to: LVKSLSLSMKFPYLI*NPPPSRGKHSCRFY
Trigger: GTAAAATCTACATGAGTGTTTCCCACGACTTGGAGGTGGATTGCATATGAGGTATGGAAATTTCATCGATAAGCTAAGACTCTTCACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000453512.5
CDS-3UTR CAA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATAGGATTTTCCAGCATTaGGGAATCCTACTAGGCCTA +
Preference number: 5 (lower is better)
Translates to: IPLFICAPSIKPGRSATDRIFQH*GILLGL
Trigger: TAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCT...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp TTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTGTTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LFICAPSIKPGRSATDICLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...ACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
CDS-3UTR CAA 90 bp CTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCTTTGTGGCCCATTCCTTaGTTCATATGTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LCSYVLLLLNPEDQLLISLWPIP*FICAPS
Trigger: AGAAGGAGCACATATGAACAAAGGAATGGGCCACAA...AGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000439832.5
ENST00000453512.5
CDS-3UTR CAA 90 bp TTCTATATGCTTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: FYMLEEFVAHSFVHMCSFICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...GAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR CAA 90 bp TTGAGGAATTTGTGGCCCATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCTGTACAACAGATCTCTaGAACTCAGTTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LRNLWPIPLFICAPSIKPCTTDL*NSVALS
Trigger: AGACAAGGCAACTGAGTTCAAGAGATCTGTTGTACA...GGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAATTCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp CAATCCCCTGCAGTTTCTGTTATCAAAGGCAAGATATACAAGGACAGTAGGTCCACTACCTATTTCATTTaGCTTTTTCTTCAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QSPAVSVIKGKIYKDSRSTTYFI*LFLQLA
Trigger: AGCCAGCTGAAGAAAAAGCAAAATGAAATAGGTAGT...GGACCTACTGTCCTTGTATATCTTGCCTTTGATAACAGAAACTGCAGGGGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATACCACCAAGACCTCCTaGAGCTACCAAAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNTTKTS*SYQNSV
Trigger: GACAGAATTTTGGTAGCTCAAGGAGGTCTTGGTGGT...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222511.11
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTATATGCTTGAGGAATTaGTGGCCCATTCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLICLRN*WPIPLF
Trigger: GAACAAAGGAATGGGCCACAAATTCCTCAAGCATAT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp ACTTTACCAAAGGGTGAACAGCCATATCTCAGGCTGTATGCAACATTAAATTCCGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 5 (lower is better)
Translates to: TLPKGEQPYLRLYATLNSVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...GGAATTTAATGTTGCATACAGCCTGAGATATGGCTGTTCACCCTTTGGTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCGTTCTTTCTATATGCTaGAGGAATTTGTGGCCCATT +
Preference number: 5 (lower is better)
Translates to: PLFICAPSIKPGRSATDIVLSIC*RNLWPI
Trigger: AATGGGCCACAAATTCCTCAAGCATATAGAAAGAAC...GATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380058.7
ENST00000439832.5
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp ATTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATAACATGTCCTCCAGGTaGTCACAGATGAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: IPLFICAPSIKPGRSATDNMSSR*SQMKGF
Trigger: AAATCCTTTCATCTGTGACAACCTGGAGGACATGTT...ATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTTGTACAACAGATCTCTaGAACTCAGTTGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLCTTDL*NSVALS
Trigger: AGACAAGGCAACTGAGTTCAAGAGATCTGTTGTACA...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp AGCTGGCTCATCAATTCATGGAACTTATCTTGGGCATCTGGCAAGTCCATTTTAATCTGCCAACACTTTTaGTCCACTGTTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: SWLINSWNLSWASGKSILICQHF*STVYLI
Trigger: AATGAGATAAACAGTGGACAAAAAGTGTTGGCAGAT...TAAAATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS-3UTR CAA 90 bp CGTAATCTGCAATTGCAGGTTTTGCATGAGAAACACAACTTAGCAAAGAGGATTTCATGTAGATTTTACTaGGGCAAATTTAGGAGCGCG +
Preference number: 5 (lower is better)
Translates to: RNLQLQVLHEKHNLAKRISCRFY*GKFRSA
Trigger: CGCGCTCCTAAATTTGCCCAAGTAAAATCTACATGA...AATCCTCTTTGCTAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAGATTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421719.5
CDS-3UTR CAA 90 bp TTGTTAATTACAGTCACCAAGCTGTACAACAGATCTCTTGAACTCAGTTGCCTTCTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 5 (lower is better)
Translates to: LLITVTKLYNRSLELSCLLQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...AAGGCAACTGAGTTCAAGAGATCTGTTGTACAGCTTGGTGACTGTAATTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222511.11
ENST00000257659.12
ENST00000380058.7
CDS-3UTR CAA 90 bp TTCCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATACTGCAATTGCAGGTTTaGCATGAGAAACACAACTTA +
Preference number: 5 (lower is better)
Translates to: FLCSYVLLLLNPEDQLLILQLQV*HEKHNL
Trigger: TAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAG...TATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380058.7
ENST00000421719.5
ENST00000453512.5
CDS-3UTR CAA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATTTCATGGAACTTATCTaGGGCATCTGGCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNFMELI*GIWQVH
Trigger: ATGGACTTGCCAGATGCCCAAGATAAGTTCCATGAA...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp CCTTTGTTCATATGTGCTCCTTCTATTAAACCCGGAAGATCAGCTACTGATATCACTACCTATTTCATTTaGCTTTTTCTTCAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PLFICAPSIKPGRSATDITTYFI*LFLQLA
Trigger: AGCCAGCTGAAGAAAAAGCAAAATGAAATAGGTAGT...GATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380058.7
CDS GCA 90 bp GATTTTCTAAAATTTAAGTCATTCAGTAATTACTTACTTGCTGTTTaGTCCTACTCCAGCCACAAACCGTTTCCGAGGATACCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: DFLKFKSFSNYLLAV*SYSSHKPFPRIPVF
Trigger: AAAGACAGGTATCCTCGGAAACGGTTTGTGGCTGGAGTAGGAGCAAACAGCAAGTAAGTAATTACTGAATGACTTAAATTTTAGAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477972.1
CDS-3UTR CAA 90 bp AGAAAGCTCTGCAAGAACTACTGGGACTTTGTAAAAATTTGCTGTACATTGAATTTCAGTGCACTAATTTaGCTGTTTGCTCCTACTCCA +
Preference number: 5 (lower is better)
Translates to: RKLCKNYWDFVKICCTLNFSALI*LFAPTP
Trigger: TGGAGTAGGAGCAAACAGCAAAATTAGTGCACTGAA...ATTCAATGTACAGCAAATTTTTACAAAGTCCCAGTAGTTCTTGCAGAGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS-3UTR CAA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTAAAAGCTGTCCTGTATaGAGTGTGAGAAGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LDMITSTDHVLEQDFWICKSCPV*SVRRKL
Trigger: CAGCTTTCTTCTCACACTCAATACAGGACAGCTTTT...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS TCA 90 bp GACTTTCATGATAATGCTTCCTGTTTGTTCAAACAAGAGGACTTATaGGCAGAAAAGTTCGTAATGTATTCAGGATTCTCACTTACTGAT +
Preference number: 5 (lower is better)
Translates to: DFHDNASCLFKQEDL*AEKFVMYSGFSLTD
Trigger: ATCAGTAAGTGAGAATCCTGAATACATTACGAACTTTTCTGCTCATAAGTCCTCTTGTTTGAACAAACAGGAAGCATTATCATGAAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS-3UTR CAA 90 bp TTAGATATGATTACTAGCACAGACCATGTACTCGAACAAGATTTCTGGATTTGTATCTGCCAACACTTTTaGTCCACTGTTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: LDMITSTDHVLEQDFWICICQHF*STVYLI
Trigger: AATGAGATAAACAGTGGACAAAAAGTGTTGGCAGAT...ACAAATCCAGAAATCTTGTTCGAGTACATGGTCTGTGCTAGTAATCATATCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222511.11
ENST00000380058.7
CDS CAA 72 bp CAATGCACCATGGCTGCAACAGGCCAGGAAACCTTCTaGCGGAAGCGGCACAAGCCGCAGTACAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: QCTMAATGQETF*RKRHKPQYSAA
Trigger: GGCCGCGCTGTACTGCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS GCA 72 bp AATGCACCATGGCTGCAACAGGCCAGGAAACCTTCTTaGGGAAGCGGCACAAGCCGCAGTACAGCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: NAPWLQQARKPS*GSGTSRSTARP
Trigger: AGGCCGCGCTGTACTGCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS CAA 90 bp ACGCAACTGCAATGCACCATGGCTGCAACAGGCCAGGAAACCTTCTaGCGGAAGCGGCACAAGCCGCAGTACAGCGCGGCCTTTTTACGT +
Preference number: 6 (lower is better)
Translates to: TQLQCTMAATGQETF*RKRHKPQYSAAFLR
Trigger: ACGTAAAAAGGCCGCGCTGTACTGCGGCTTGTGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257659.12
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTaGAATCCCGTCTCAGACAATGAGAGTTCAAGCCCT +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSRLTR*NPVSDNESSSP
Trigger: AGGGCTTGAACTCTCATTGTCTGAGACGGGATTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS GCA 72 bp CTTTCTGAACAACACGCAACTGCAATGCACCATGGCTaGAACAGGCCAGGAAACCTTCTTGCGGAAGCGGCA +
Preference number: 6 (lower is better)
Translates to: LSEQHATAMHHG*NRPGNLLAEAA
Trigger: TGCCGCTTCCGCAAGAAGGTTTCCTGGCCTGTTGCAGCCATGGTGCATTGCAGTTGCGTGTTGTTCAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257659.12
ENST00000417207.5
ENST00000477972.1
CDS CAA 72 bp TGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTaGCTGGCCTCAGGAGTGAAGCTGCAAACCTCCACG +
Preference number: 6 (lower is better)
Translates to: CSEFLPSGGFVV*LASGVKLQTST
Trigger: CGTGGAGGTTTGCAGCTTCACTCCTGAGGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 72 bp CTGGAGTTGTTCATTCCTCCCAGTGGGTTTGTGGTCTaGCTGGCTTCAGCAGTGAAGCTACAGACCTTCGTG +
Preference number: 6 (lower is better)
Translates to: LELFIPPSGFVV*LASAVKLQTFV
Trigger: CACGAAGGTCTGTAGCTTCACTGCTGAAGCCAGCAAGACCACAAACCCACTGGGAGGAATGAACAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 90 bp GTTCAGATGTGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTaGCTGGCCTCAGGAGTGAAGCTGCAAACCTCCACGGTGAGCATT +
Preference number: 6 (lower is better)
Translates to: VQMCSEFLPSGGFVV*LASGVKLQTSTVSI
Trigger: AATGCTCACCGTGGAGGTTTGCAGCTTCACTCCTGAGGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACACATCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 72 bp GTGAGCATTAGAACTCCTAAGGCAGCAGGTCTGGAGTaGTTCATTCCTCCCAGTGGGTTTGTGGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VSIRTPKAAGLE*FIPPSGFVVLL
Trigger: CAGCAAGACCACAAACCCACTGGGAGGAATGAACAACTCCAGACCTGCTGCCTTAGGAGTTCTAATGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS TCA 72 bp CACCAAAGTGGTTGGTGGGCCAATTTCTCCATCTCTTaGTTTCCTCACTATTCCAAGAACGGTAAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: HQSGWWANFSIS*FPHYSKNGKGP
Trigger: CGGCCCCTTACCGTTCTTGGAATAGTGAGGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 72 bp CCTCCAAGTCGTGGGAAACACTCATGTAGATTTTACTaGGGCAAATTTAGGAGCGCGGGCCAATCACAAAGG +
Preference number: 6 (lower is better)
Translates to: PPSRGKHSCRFY*GKFRSAGQSQR
Trigger: CCTTTGTGATTGGCCCGCGCTCCTAAATTTGCCCAAGTAAAATCTACATGAGTGTTTCCCACGACTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000450619.5
ENST00000453512.5
ENST00000469675.1
CDS CCA 72 bp CTCCAAGTCGTGGGAAACACTCATGTAGATTTTACTTaGGCAAATTTAGGAGCGCGGGCCAATCACAAAGGA +
Preference number: 6 (lower is better)
Translates to: LQVVGNTHVDFT*ANLGARANHKG
Trigger: TCCTTTGTGATTGGCCCGCGCTCCTAAATTTGCCCAAGTAAAATCTACATGAGTGTTTCCCACGACTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000450619.5
ENST00000453512.5
ENST00000469675.1
CDS CAA 72 bp GAGACTGTTGGGCCGTTTCCTCAGGCCATATCTTATTaGACTGGGAAATGTCTACTAGTGAGGCAATTGGAG +
Preference number: 6 (lower is better)
Translates to: ETVGPFPQAISY*TGKCLLVRQLE
Trigger: CTCCAATTGCCTCACTAGTAGACATTTCCCAGTCAAATAAGATATGGCCTGAGGAAACGGCCCAACAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS GCA 72 bp AATTGGAGTTATGGGGTATGCCCTAAATGCCTCATATaGAATCCACCTCCAAGTCGTGGGAAACACTCATGT +
Preference number: 6 (lower is better)
Translates to: NWSYGVCPKCLI*NPPPSRGKHSC
Trigger: ACATGAGTGTTTCCCACGACTTGGAGGTGGATTGCATATGAGGCATTTAGGGCATACCCCATAACTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 72 bp CACAAAGGAAACTCTCCTCTTTTACCACCAAAGTGGTaGGTGGGCCAATTTCTCCATCTCTTGATTTCCCTG +
Preference number: 6 (lower is better)
Translates to: HKGNSPLLPPKW*VGQFLHLLISL
Trigger: CAGGGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAGAGGAGAGTTTCCTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000450619.5
ENST00000453512.5
CDS CCA 72 bp TGTTGGGCCGTTTCCTCAGGCCATATCTTATTTGACTaGGAAATGTCTACTAGTGAGGCAATTGGAGTTATG +
Preference number: 6 (lower is better)
Translates to: CWAVSSGHILFD*EMSTSEAIGVM
Trigger: CATAACTCCAATTGCCTCACTAGTAGACATTTCCCAGTCAAATAAGATATGGCCTGAGGAAACGGCCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CAA 72 bp CACAAAGGAAACTCTCCTCTTTTACCACCAAAGTGGTaGGTGGGCCAATTTCTCCATCTCTTGATTTCCTCA +
Preference number: 6 (lower is better)
Translates to: HKGNSPLLPPKW*VGQFLHLLISS
Trigger: TGAGGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAGAGGAGAGTTTCCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS TCA 72 bp AGCCCTCATTCATCACGATTGGTTTCTTACCCCACCTaGGTTCCTGCTTTTCCACACGTAATTATGTTTCTT +
Preference number: 6 (lower is better)
Translates to: SPHSSRLVSYPT*VPAFPHVIMFL
Trigger: AAGAAACATAATTACGTGTGGAAAAGCAGGAACTCAGGTGGGGTAAGAAACCAATCGTGATGAATGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS CCA 72 bp AATCACAAAGGAAACTCTCCTCTTTTACCACCAAAGTaGTTGGTGGGCCAATTTCTCCATCTCTTGATTTCC +
Preference number: 6 (lower is better)
Translates to: NHKGNSPLLPPK*LVGQFLHLLIS
Trigger: GGAAATCAAGAGATGGAGAAATTGGCCCACCAACCACTTTGGTGGTAAAAGAGGAGAGTTTCCTTTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000450619.5
ENST00000453512.5
ENST00000469675.1
CDS GCA 72 bp AGTCTTAGCTTATCGATGAAATTTCCATACCTCATATaGAATCCACCTCCAAGTCGTGGGAAACACTCATGT +
Preference number: 6 (lower is better)
Translates to: SLSLSMKFPYLI*NPPPSRGKHSC
Trigger: ACATGAGTGTTTCCCACGACTTGGAGGTGGATTGCATATGAGGTATGGAAATTTCATCGATAAGCTAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421719.5
ENST00000426366.5
ENST00000453512.5
CDS CCA 72 bp CACGTAATTATGTTTCTTTCTTCAACAATGAAGCCTTaGACCCTCGTGGTGAGTGTTACAGTTCTTAAAGGC +
Preference number: 6 (lower is better)
Translates to: HVIMFLSSTMKP*TLVVSVTVLKG
Trigger: GCCTTTAAGAACTGTAACACTCACCACGAGGGTCCAAGGCTTCATTGTTGAAGAAAGAAACATAATTACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS GCA 72 bp TTCATCACGATTGGTTTCTTACCCCACCTGAGTTCCTaGTTTTCCACACGTAATTATGTTTCTTTCTTCAAC +
Preference number: 6 (lower is better)
Translates to: FITIGFLPHLSS*FSTRNYVSFFN
Trigger: GTTGAAGAAAGAAACATAATTACGTGTGGAAAAGCAGGAACTCAGGTGGGGTAAGAAACCAATCGTGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469675.1
CDS GCA 72 bp AAATTTAAGTCATTCAGTAATTACTTACTTGCTGTTTaGTCCTACTCCAGCCACAAACCGTTTCCGAGGATA +
Preference number: 6 (lower is better)
Translates to: KFKSFSNYLLAV*SYSSHKPFPRI
Trigger: TATCCTCGGAAACGGTTTGTGGCTGGAGTAGGAGCAAACAGCAAGTAAGTAATTACTGAATGACTTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477972.1