RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF3C5 (Homo sapiens)

Ensembl gene IDs: ENSG00000148308

Ensembl transcript IDs: ENST00000342018.12, ENST00000372097.10, ENST00000372099.10, ENST00000372108.9, ENST00000435745.1, ENST00000439697.1, ENST00000440319.5, ENST00000461871.1, ENST00000485692.1, ENST00000489842.1

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTCTGTCCTCCTGTGTGTGCCCAATTCCGATCATTCCCGGAGTaGTCACGTGGCTCAGTGGGGGCCCAGGCTCCCAAAGGGCTCGAG +
Preference number: 1 (lower is better)
Translates to: WLCPPVCAQFRSFPE*SRGSVGAQAPKGLE
Trigger: CTCGAGCCCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACACACAGGAGGACAGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR GCA 90 bp CAGCTGCAGCCCACATGGCCTGCTCTGGCTCTGTCCTCCTGTGTGTaGCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: QLQPTWPALALSSCV*PIPIIPGVVTWLSG
Trigger: CCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACACACAGGAGGACAGAGCCAGAGCAGGCCATGTGGGCTGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR GCA 90 bp GGGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTaGTGGTGCCAGACTTCCCTGAGACTTGTCACCACCTCTTCGCCA +
Preference number: 1 (lower is better)
Translates to: GPRLPKGSRRTTTCS*WCQTSLRLVTTSSP
Trigger: TGGCGAAGAGGTGGTGACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR GCA 90 bp CAGTGGGGGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATaGAGCTGCTGGTGCCAGACTTCCCTGAGACTTGTCACCACCTCT +
Preference number: 1 (lower is better)
Translates to: QWGPRLPKGSRRTTT*SCWCQTSLRLVTTS
Trigger: AGAGGTGGTGACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCCCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR CCA 90 bp TGTGTGCCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTaGGGGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGC +
Preference number: 1 (lower is better)
Translates to: CVPNSDHSRSGHVAQ*GPRLPKGSRRTTTC
Trigger: GCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR CCA 90 bp TCCTCCTGTGTGTGCCCAATTCCGATCATTCCCGGAGTGGTCACGTaGCTCAGTGGGGGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAA +
Preference number: 1 (lower is better)
Translates to: SSCVCPIPIIPGVVT*LSGGPGSQRAREGQ
Trigger: TTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACACACAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR GCA 90 bp GCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATGCTGGGCTGGTTCATGGGTGGCAGA +
Preference number: 1 (lower is better)
Translates to: APPPAFTGLILRGIG*PLTGWMLGWFMGGR
Trigger: TCTGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 90 bp CATTGGGTGCCCACTCACTGGCTGGATGCTGGGCTGGTTCATGGGTaGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCA +
Preference number: 1 (lower is better)
Translates to: HWVPTHWLDAGLVHG*QSQGIPFGDVPNPS
Trigger: TGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 90 bp ATCCTGAGAGGCATTGGGTGCCCACTCACTGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCC +
Preference number: 1 (lower is better)
Translates to: ILRGIGCPLTGWMLG*FMGGRARVYPLGMS
Trigger: GGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR TCA 90 bp GTGCCAAACGGTTGGGATCCAGAGCTAAAGGCACTTCTTGCCACGTaGGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGT +
Preference number: 1 (lower is better)
Translates to: VPNGWDPELKALLAT*DHGRGSPRYLHHHS
Trigger: ACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACCGTTTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 90 bp CCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTaGTGCCAGACTTCCCTGAGACTTGTCACCACCTCTTCGCCAGAT +
Preference number: 1 (lower is better)
Translates to: PRLPKGSRRTTTCSC*CQTSLRLVTTSSPD
Trigger: ATCTGGCGAAGAGGTGGTGACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR GCA 90 bp CAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCA +
Preference number: 1 (lower is better)
Translates to: QSCAKRLGSRAKGTS*HVRPWARLPTLSPP
Trigger: TGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR GCA 90 bp AGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTaGCAGACTTCCCTGAGACTTGTCACCACCTCTTCGCCAGATGTC +
Preference number: 1 (lower is better)
Translates to: RLPKGSRRTTTCSCW*QTSLRLVTTSSPDV
Trigger: GACATCTGGCGAAGAGGTGGTGACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCTCCGGGCACTGTGGGTaGCAATGGGGAGCCCCGGCT +
Preference number: 2 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGSGHCG*QWGAPA
Trigger: AGCCGGGGCTCCCCATTGCCACCCACAGTGCCCGGA...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp CTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGGGTCACGTGGCTCAGTaGGGGCCCAGGCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: LNVGTALETANPRWATALGHVAQ*GPRLPK
Trigger: CTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACC...CAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp TGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGACGGACAGCTGCAGCCCACATaGCCTGCTCTGGCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: CGNSSGNRQPPLGNRTDGQLQPT*PALALS
Trigger: GGACAGAGCCAGAGCAGGCCATGTGGGCTGCAGCTG...TCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR GCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAACTGGGGCTCCACAGCTaGCCAGCTCCACCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKLGLHS*PAPPPA
Trigger: TGCCGGAGGTGGAGCTGGGCAGCTGTGGAGCCCCAG...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCACACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSGWMLG*FMGGRA
Trigger: GGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGGWMLG*FMGGRA
Trigger: GGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCC...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR TCA 90 bp CTGTGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAAGCTGGGCAACCGCACTaGCGGAAACGTGAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LWSGLREPECGNSSGNRQAGQPH*RKREPV
Trigger: CACTGGCTCACGTTTCCGTCAGTGCGGTTGCCCAGC...TTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp TGCCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCCAACACACACAGCCCTaGGGCTTTGCACCCGAGTTC +
Preference number: 2 (lower is better)
Translates to: CPIPIIPGVVTWLSGGPGQHTQP*GFAPEF
Trigger: GAACTCGGGTGCAAAGCCCCAGGGCTGTGTGTGTTG...GCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp AGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGACGGAAACGTGAGCCCACATGGCCTGCTCTaGCTCTGTCCTCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SSGNRQPPLGNRTDGNVSPHGLL*LCPPVC
Trigger: ACACACAGGAGGACAGAGCCAGAGCAGGCCATGTGG...GCTCACGTTTCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGGGCTGGTTCATGGGTaGCAGAGCCAGGGTATACCC +
Preference number: 2 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAGLVHG*QSQGIP
Trigger: GGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATTACTGGTCTCATCCTaGGAGGCATTGGGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSLLVSS*EALGAH
Trigger: GTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAA...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR TCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAACCACCACCACAGTCATaGGAGCCAAGCGAGACTGGC +
Preference number: 2 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKPPPQS*EPSETG
Trigger: GCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGG...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 2 (lower is better)
Translates to: HAISTTTVMRAKRDWPVALRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 2 (lower is better)
Translates to: HAISTTTVMRAKRDWPVACWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAATGGGTGCCCACTCACTaGCTGGATGCTGGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKWVPTH*LDAGLV
Trigger: AACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCA...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp CCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTACATGCAGCTGCTGGTaGCAGACTTCCCTGAGACTT +
Preference number: 2 (lower is better)
Translates to: PECGNSSGNRQPPLGNRTTCSCW*QTSLRL
Trigger: AAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGT...AGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR GCA 90 bp CTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGAGAAGGACAACCACATaGAGCTGCTGGTGCCAGACT +
Preference number: 2 (lower is better)
Translates to: LNVGTALETANPRWATALRRTTT*SCWCQT
Trigger: AGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCT...CAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR GCA 90 bp CTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGCTGTCCTCCTGTGTGTaGCCAATTCCGATCATTCCC +
Preference number: 2 (lower is better)
Translates to: LNVGTALETANPRWATALLSSCV*PIPIIP
Trigger: GGGAATGATCGGAATTGGGCACACACAGGAGGACAG...CAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp CTGTGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAAACCACATGCAGCTGCTaGTGCCAGACTTCCCTGAGA +
Preference number: 2 (lower is better)
Translates to: LWSGLREPECGNSSGNRQTTCSC*CQTSLR
Trigger: TCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGT...TTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTA +
Preference number: 2 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCACHVRP*ARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CAA 90 bp ACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGCACTTCTTGCCACGTGAGACCATGG +
Preference number: 2 (lower is better)
Translates to: TIPEGPGCGQSCAKR*GSRAKGTSCHVRPW
Trigger: CCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR TCA 90 bp CCAGGGCTGTGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACTCAGTGTCTGAAGGCTaGCCTAAAAGGAAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: PGLWSGLREPECGNSSGNSVSEG*PKRKQG
Trigger: ACCTTGCTTCCTTTTAGGTCAGCCTTCAGACACTGA...GTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR GCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 2 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCALRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 2 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCACWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR-3UTR GCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCG +
Preference number: 2 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTAKGTS*HVRPWA
Trigger: CGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGC...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR TCA 72 bp GCCTCCCCCAGGGCTGTGGAGCGGCTTGCGGGAGCCTaGATGTGGGAACAGCTCTGGAAACCGCCAACCCCC +
Preference number: 3 (lower is better)
Translates to: ASPRAVERLAGA*MWEQLWKPPTP
Trigger: GGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCCCTGGGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CAA 90 bp CCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCTCCCAAAGGCACAGCCCTGGGGCTTaGCACCCGAGTTCTCACCCT +
Preference number: 3 (lower is better)
Translates to: PIIPGVVTWLSGGPGSQRHSPGA*HPSSHP
Trigger: AGGGTGAGAACTCGGGTGCAAAGCCCCAGGGCTGTG...CCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR TCA 72 bp GCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATaGGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: ARLPTLSPPPQS*EPSETGLWPGA
Trigger: AGCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR TCA 72 bp CTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTaGCGGAAACGTGAGCCAGTGAGGCTCCTGCCACAG +
Preference number: 3 (lower is better)
Translates to: LWKPPTPAGQPH*RKREPVRLLPQ
Trigger: CTGTGGCAGGAGCCTCACTGGCTCACGTTTCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR CCA 72 bp GTGTGCCCAATTCCGATCATTCCCGGAGTGGTCACGTaGCTCAGTGGGGGCCCAGGCTCCCAAAGGGCTCGA +
Preference number: 3 (lower is better)
Translates to: VCPIPIIPGVVT*LSGGPGSQRAR
Trigger: TCGAGCCCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CAA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 3 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR GCA 72 bp CCCACATGGCCTGCTCTGGCTCTGTCCTCCTGTGTGTaGCCAATTCCGATCATTCCCGGAGTGGTCACGTGG +
Preference number: 3 (lower is better)
Translates to: PTWPALALSSCV*PIPIIPGVVTW
Trigger: CCACGTGACCACTCCGGGAATGATCGGAATTGGGCACACACAGGAGGACAGAGCCAGAGCAGGCCATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR CCA 72 bp CCCACTCACTGGCTGGATGCTGGGCTGGTTCATGGGTaGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCT +
Preference number: 3 (lower is better)
Translates to: PTHWLDAGLVHG*QSQGIPFGDVP
Trigger: AGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 72 bp GGTGCCCACTCACTGGCTGGATGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGT +
Preference number: 3 (lower is better)
Translates to: GAHSLAGCWAGS*VAEPGYTLWGC
Trigger: ACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGAGTGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR TCA 72 bp GGTTGGGATCCAGAGCTAAAGGCACTTCTTGCCACGTaGGACCATGGGCGAGGCTCCCCACGCTATCTCCAC +
Preference number: 3 (lower is better)
Translates to: GWDPELKALLAT*DHGRGSPRYLH
Trigger: GTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR GCA 72 bp GCCAAACGGTTGGGATCCAGAGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCGAGGCTCCCCACGCTA +
Preference number: 3 (lower is better)
Translates to: AKRLGSRAKGTS*HVRPWARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACCGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 72 bp TCCAGAGCTAAAGGCACTTCTTGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTATCTCCACCACCACAG +
Preference number: 3 (lower is better)
Translates to: SRAKGTSCHVRP*ARLPTLSPPPQ
Trigger: CTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR GCA 72 bp CCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATGCTGGGCTGGTTCATG +
Preference number: 3 (lower is better)
Translates to: PAFTGLILRGIG*PLTGWMLGWFM
Trigger: CATGAACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR GCA 72 bp CTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTaGTGGTGCCAGACTTCCCTGAGACTTGTCACCACC +
Preference number: 3 (lower is better)
Translates to: LPKGSRRTTTCS*WCQTSLRLVTT
Trigger: GGTGGTGACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR-3UTR CAA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 3 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CCA 72 bp TGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTaGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGC +
Preference number: 3 (lower is better)
Translates to: WFNKDNSRGAWL*PKLCQTVGIQS
Trigger: GCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCATCCGGGCACTGTGGGTaGCAATGGGGAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPSGHCG*QWGAPA
Trigger: AGCCGGGGCTCCCCATTGCCACCCACAGTGCCCGGA...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCCACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCTCCCAAAGGCCCGGAGTGGTCACGTaGCTCAGTGGGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PIIPGVVTWLSGGPGSQRPGVVT*LSGGPG
Trigger: GCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGG...CCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCAGGCTGCTGGTACTaGAGCGGTTGGCGCACACTG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPAGCWY*SGWRTL
Trigger: CAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGGGACATGGTGTCCCTaGGCTCGTCGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPGTWCP*ARRWSW
Trigger: CCAAGACCAGCGACGAGCTCAGGGACACCATGTCCC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCACTCCACGCACACCATaGGTCGCTCCCGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPTPRTP*VAPASA
Trigger: AGCTGAGGCGGGAGCGACGCATGGTGTGCGTGGAGT...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCGGAGTGGGCCTCAGTaGCCAGCACCCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGRSGPQ*PAPLSA
Trigger: GGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGGGGGCGCCGGGCTCTaGTCAGGCCAATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPGGAGL*SGQSDS
Trigger: AGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGGCTCGTCGCTGGTCTTaGGGAGGCACCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGARRWS*GGTTHP
Trigger: GGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGC...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCATGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTA +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPCHVRP*ARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCCCTCCCCCAGGGCTGTaGAGCGGCTTGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CPIPIIPGVVTWLSGGPGPPPGL*SGLREP
Trigger: AGGCTCCCGCAAGCCGCTCCACAGCCCTGGGGGAGG...GCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCCTGGGGCTCCACAGCTaGCCAGCTCCACCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVLGLHS*PAPPPA
Trigger: TGCCGGAGGTGGAGCTGGGCAGCTGTGGAGCCCCAG...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCCGCCGCCATCCCTGTaGGTCTGGCAGGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPPPPSL*VWQGPP
Trigger: TGGCGGGCCCTGCCAGACGCACAGGGATGGCGGCGG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS-3UTR GCA 90 bp AGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGACGGAAACGTGAGCTTCCACCGTGCGGGATaGCCCCTTCTCGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSGNRQPPLGNRTDGNVSFHRAG*PLLGLP
Trigger: GGGGAGGCCGAGAAGGGGGCATCCCGCACGGTGGAA...GCTCACGTTTCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAATGTGACCTCGGAGTaGGCCTCAGTGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPNVTSE*ASVPST
Trigger: GGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATT...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPTKMAL*GRRALL
Trigger: GAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGT...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGGAGGCCCAGCCTTaGGCCCTGTCACACGTAGTC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGREAQP*ALSHVV
Trigger: GACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCT...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTCCGGGCACTGTGGGTaGCAATGGGGAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLSGHCG*QWGAPA
Trigger: AGCCGGGGCTCCCCATTGCCACCCACAGTGCCCGGA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGGGCTGGTTCATGGGTaGCAGAGCCAGGGTATACCC +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPGLVHG*QSQGIP
Trigger: GGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGCCTCCCCTCCATTCCTaGCCTCCAGGGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LNVGTALETANPRWATALPPLHS*PPGAPT
Trigger: GGTGGGCGCCCCTGGAGGCCAGGAATGGAGGGGAGG...CAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp CCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCTCCCAAAGGGGTCACGTGGCTCAGTaGGGGCCCAGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PIIPGVVTWLSGGPGSQRGHVAQ*GPRLPK
Trigger: CTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACC...CCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCCATCAGCCTTGGCTaGGCTGGAAAAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPAISLG*AGKESR
Trigger: CCTGCTCTCTTTTCCAGCTCAGCCAAGGCTGATGGC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCCACCACCACAGTCATaGGAGCCAAGCGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGPPPQS*EPSETG
Trigger: GCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCCCAGCACCCCTTTCTaGCGCCTCGTTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGPSTPF*RLVLFL
Trigger: CAGGAAGAGAACGAGGCGGCAGAAAGGGGTGCTGGG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPLRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGTTGGCGCACACTGGGTaGCAGTATGGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGLAHTG*QYGSLG
Trigger: GCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAA...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPCWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGACGGAAACGTGAGCACCGCCAACCCCCGCTaGGCAACCGCACTGACGGAA +
Preference number: 4 (lower is better)
Translates to: SSGNRQPPLGNRTDGNVSTANPR*ATALTE
Trigger: TTCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGT...GCTCACGTTTCCGTCAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCATCTCCATGTCAAATGTaGCCTCGGAGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPSPCQM*PRSGPQ
Trigger: CTGAGGCCCACTCCGAGGTCACATTTGACATGGAGA...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AAGGCTGACCTAAAAGGAAGCAAGGTGCCGAGGCCCCGGTGGGCAGAGCTGCCCGCACTGACGGAAACGTaGGCCAGTGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KADLKGSKVPRPRWAELPALTET*ASEAPA
Trigger: GGCAGGAGCCTCACTGGCTCACGTTTCCGTCAGTGC...GGGCAGCTCTGCCCACCGGGGCCTCGGCACCTTGCTTCCTTTTAGGTCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp GGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTGCCCGGCTTGCGGGAGCCTaGATGTGGGAACAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPGSQRAREGQPHAAAGARLAGA*MWEQLW
Trigger: CCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCG...GGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCACTCCACGCACACCATaGGTCGCTCCCGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVTPRTP*VAPASA
Trigger: AGCTGAGGCGGGAGCGACGCATGGTGTGCGTGGAGT...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCCCTCTTGGTGGGGTCTaGGTAGATCCGGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVPLGGV*VDPGDA
Trigger: GGCGTCTCCCGGATCTACGCAGACCCCACCAAGAGG...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCACCGCCTGCTTCCGTATaGACAGCCAAGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPPPASV*TAKYWK
Trigger: CTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGG...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCGGGGGCGCCGGGCTCTaGTCAGGCCAATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVGGAGL*SGQSDS
Trigger: AGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCC...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCCCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPPCFRS*MVTSWL
Trigger: CAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGG...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GSLNVGTALETANPRWATDGPRP*FRSCMV
Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTC...GGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCATTGGAGCGGATGGTCTaGCGGATCATGAGGGACATG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPLERMV*RIMRDM
Trigger: CATGTCCCTCATGATCCGGCAGACCATCCGCTCCAA...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGACTCGTACGTCAGCTaGTCTTTTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPDSYVS*SFPPSA
Trigger: GGCTGATGGCGGAAAAGAGCAGCTGACGTACGAGTC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGACTCGTACGTCAGCTaGTCTTTTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPDSYVS*SFPPSA
Trigger: GGCTGATGGCGGAAAAGAGCAGCTGACGTACGAGTC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCCTGGGGCTCCACAGCTaGCCAGCTCCACCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPLGLHS*PAPPPA
Trigger: TGCCGGAGGTGGAGCTGGGCAGCTGTGGAGCCCCAG...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGCCTCCACGTCTGGGCTaGAGCCTCCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLPPRLG*SLQWLL
Trigger: AAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGG...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCGTGTCACCCACAAGGTaGCCGGCCCCAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CPIPIIPGVVTWLSGGPGVSPTR*PAPRGK
Trigger: CTTCCCTCTTGGGGCCGGGCACCTTGTGGGTGACAC...GCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp GGCCCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTGCCGGCTGTGGAGCGGCTTaGGGGAGCCTGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPGSQRAREGQPHAAAGAGCGAA*GSLNVG
Trigger: TCCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCC...GGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCACTGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGHWVAV*VLGPEV
Trigger: TACTTCCGGCCCAAGGACCCATACTGCCACCCAGTG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCACAGCCTTGGCTGAGCTaGAAAAGAGAGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPQPWLS*KREQAS
Trigger: AGAGGCCTGCTCTCTTTTCCAGCTCAGCCAAGGCTG...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGAGGGAGGCCCAGCCTTaGGCCCTGTCACACGTAGTC +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLREAQP*ALSHVV
Trigger: GACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCT...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTA +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLCHVRP*ARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCATCCCTGTGCGTCTaGCAGGGCCCGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNPSLCV*QGPPGS
Trigger: GGACCCTGGCGGGCCCTGCCAGACGCACAGGGATGG...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGCAGGCTGCTGGTACTaGAGCGGTTGGCGCACACTG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSAGCWY*SGWRTL
Trigger: CAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLCCALL*PASHWG
Trigger: CCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCTCAGGTCATGCATGGTaGCAAGCTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPSGHAW*QAGWMS
Trigger: AGACATCCAGCCAGCTTGTCACCATGCATGACCTGA...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCCCACCACCACAGTCATaGGAGCCAAGCGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVPPPQS*EPSETG
Trigger: GCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGG...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCGCTGGGCAACCGCACTaGCGGAAACGTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WSGLREPECGNSSGNRQPAGQPH*RKREPV
Trigger: CACTGGCTCACGTTTCCGTCAGTGCGGTTGCCCAGC...GGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCGGGGGCGCCGGGCTCTaGTCAGGCCAATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGGGAGL*SGQSDS
Trigger: AGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCC...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGGGGGCGCCGGGCTCTaGTCAGGCCAATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSGGAGL*SGQSDS
Trigger: AGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGGACTCGTACGTCAGCTaGTCTTTTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGDSYVS*SFPPSA
Trigger: GGCTGATGGCGGAAAAGAGCAGCTGACGTACGAGTC...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCTGGGGCTCCACAGCTaGCCAGCTCCACCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVLGLHS*PAPPPA
Trigger: TGCCGGAGGTGGAGCTGGGCAGCTGTGGAGCCCCAG...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCGCGGTTGGCGCACACTaGGTGGCAGTATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVAVGAH*VAVWVL
Trigger: AAGGACCCATACTGCCACCCAGTGTGCGCCAACCGC...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAGCTCGTCGCTGGTCTTaGGGAGGCACCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPARRWS*GGTTHP
Trigger: GGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGC...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAAGGGAGGCCCAGCCTTaGGCCCTGTCACACGTAGTC +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSREAQP*ALSHVV
Trigger: GACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCT...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTCCGGGCACTGTGGGTaGCAATGGGGAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNSGHCG*QWGAPA
Trigger: AGCCGGGGCTCCCCATTGCCACCCACAGTGCCCGGA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCGGGCTGGTTCATGGGTaGCAGAGCCAGGGTATACCC +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVGLVHG*QSQGIP
Trigger: GGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCTGTGCCAAACGGTTaGGATCCAGAGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPAVPNG*DPELKA
Trigger: TGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGGCTGCAGCCTCCAGTaGCTGCTTGGGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAGCSLQ*LLGHLL
Trigger: GAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGGACCTTGAGCTTGTCTaGGTGGACGCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGDLELV*VDADVG
Trigger: GCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTC...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCCGATCATTCCCGGAGTaGTCACGTGGCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLNVGTALETANPRWATRSFPE*SRGSVG
Trigger: CCCCACTGAGCCACGTGACCACTCCGGGAATGATCG...GGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp GCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCCCACATGGCCTGCTCTaGCTCTGTCCTCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AACGSLNVGTALETANPRPHGLL*LCPPVC
Trigger: ACACACAGGAGGACAGAGCCAGAGCAGGCCATGTGG...GCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp TGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCAGCTGCAGCCCACATaGCCTGCTCTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WSGLREPECGNSSGNRQPQLQPT*PALALS
Trigger: GGACAGAGCCAGAGCAGGCCATGTGGGCTGCAGCTG...GGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCGCAGGCTGCTGGTACTaGAGCGGTTGGCGCACACTG +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPAGCWY*SGWRTL
Trigger: CAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGC...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAGCCTCGTTCTCTTCCTaGTGCGGAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPASFSS*CGAAGC
Trigger: GCAGCCTGCTGCTCCGCATCAGGAAGAGAACGAGGC...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSCCALL*PASHWG
Trigger: CCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCA...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCATCAGCCTTGGCTaGGCTGGAAAAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLAISLG*AGKESR
Trigger: CCTGCTCTCTTTTCCAGCTCAGCCAAGGCTGATGGC...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCCCACCACCACAGTCATaGGAGCCAAGCGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGPPPQS*EPSETG
Trigger: GCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGG...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCCGGAGTGGGCCTCAGTaGCCAGCACCCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSRSGPQ*PAPLSA
Trigger: GGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCG...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCGGAGTGGGCCTCAGTaGCCAGCACCCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDRSGPQ*PAPLSA
Trigger: GGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCG...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCCCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AACGSLNVGTALETANPRPCFRS*MVTSWL
Trigger: CAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGG...GCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVADGPRP*FRSCMV
Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVLRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAGCAGCCTCCAGTGGCTaGTTGGGCACCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPAASSG*LGTSSS
Trigger: GGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGC...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCCTCCACGTCTGGGCTaGAGCCTCCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPPPRLG*SLQWLL
Trigger: AAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATTGGCGCACACTGGGTaGCAGTATGGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSLAHTG*QYGSLG
Trigger: GCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAA...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCGCGGTTGGCGCACACTaGGTGGCAGTATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGAVGAH*VAVWVL
Trigger: AAGGACCCATACTGCCACCCAGTGTGCGCCAACCGC...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCAGCGGCAGCTCCTGGTaGAAAAAGGCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVSGSSW*KKASFS
Trigger: CGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCT...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGTKMAL*GRRALL
Trigger: GAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGT...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCCATCTGCCGATAGGGTaGCAAGGCCCCTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGHLPIG*QGPFPE
Trigger: TTCCGGGAAGGGGCCTTGCCACCCTATCGGCAGATG...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGCTCGTCGCTGGTCTTaGGGAGGCACCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTARRWS*GGTTHP
Trigger: GGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAGWMLG*FMGGRA
Trigger: GGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPGWMLG*FMGGRA
Trigger: GGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCC...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTCACTGGCTGGATGCTaGGCTGGTTCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLSLAGC*AGSWVA
Trigger: TGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCATGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTA +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPCHVRP*ARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGAATTCCAGAGGGGCCTaGCTGTGGCCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLNSRGA*LWPKLC
Trigger: GCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATT...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGGCTGCAGCCTCCAGTaGCTGCTTGGGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTGCSLQ*LLGHLL
Trigger: GAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACGGCTGCAGCCTCCAGTaGCTGCTTGGGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDGCSLQ*LLGHLL
Trigger: GAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCTCCTCCACGTCTaGGCTGCAGCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPTLLHV*AAASSG
Trigger: GCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCCATTTCGGGACCAGATaGGACGGATGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPHFGTR*DGCQTA
Trigger: AGCTGTTTGACATCCGTCCCATCTGGTCCCGAAATG...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGCCTCGTTCTCTTCCTaGTGCGGAGCAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTASFSS*CGAAGC
Trigger: GCAGCCTGCTGCTCCGCATCAGGAAGAGAACGAGGC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTCTCGGGCCGGAGCATaGGCACCTTGTCATACATTG +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVSRAGA*APCHTL
Trigger: CAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGA...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCACCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPPHPQS*QRWHCG
Trigger: CCCACAATGCCATCTTTGTCAACTTTGAGGATGAGG...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CTGTGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAATGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LWSGLREPECGNSSGNRQCCALL*PASHWG
Trigger: CCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCA...TTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGAGTCCCTCAGTGTCTaGAGGCTGACCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLESLSV*RLTLSL
Trigger: CAAGCTCAAGGTCAGCCTTCAGACACTGAGGGACTC...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342018.12
ENST00000372108.9
CDS-3UTR TCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCGGGACATGGTGTCCCTaGGCTCGTCGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSGTWCP*ARRWSW
Trigger: CCAAGACCAGCGACGAGCTCAGGGACACCATGTCCC...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACGGGACATGGTGTCCCTaGGCTCGTCGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNGTWCP*ARRWSW
Trigger: CCAAGACCAGCGACGAGCTCAGGGACACCATGTCCC...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGGGACATGGTGTCCCTaGGCTCGTCGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWGTWCP*ARRWSW
Trigger: CCAAGACCAGCGACGAGCTCAGGGACACCATGTCCC...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGCCATCAGCCTTGGCTaGGCTGGAAAAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSAISLG*AGKESR
Trigger: CCTGCTCTCTTTTCCAGCTCAGCCAAGGCTGATGGC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCCACCACCACAGTCATaGGAGCCAAGCGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAPPPQS*EPSETG
Trigger: GCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCACTCCACGCACACCATaGGTCGCTCCCGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTTPRTP*VAPASA
Trigger: AGCTGAGGCGGGAGCGACGCATGGTGTGCGTGGAGT...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCCGTATGCTTGCCGCCTaGTTCCGTATGCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVRMLAA*FRMHSQ
Trigger: TTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACG...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGACATTGACGTATGCTTaGCGCCTGCTTCCGTATGCA +
Preference number: 4 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGTLTYA*RLLPYA
Trigger: TGCATACGGAAGCAGGCGGCAAGCATACGTCAATGT...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKDGPRP*FRSCMV
Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTC...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTDGPRP*FRSCMV
Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSLRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAGCAGCCTCCAGTGGCTaGTTGGGCACCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKAASSG*LGTSSS
Trigger: GGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGC...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCACATGCAGCTGCTGGTaGCAGACTTCCCTGAGACTT +
Preference number: 4 (lower is better)
Translates to: AACGSLNVGTALETANPRTCSCW*QTSLRL
Trigger: AAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGT...GCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp GAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACAACCACATGCAGCTaGTGGTGCCAGACTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPECGNSSGNRQPPLGNRTTTCS*WCQTSL
Trigger: CAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGT...GCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAGCTCCAGCCTCTTGGTaGGGTCTGCGTAGATCCGGG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKAPASW*GLRRSG
Trigger: CCCGGATCTACGCAGACCCCACCAAGAGGCTGGAGC...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACGCTCCAGCCTCTTGGTaGGGTCTGCGTAGATCCGGG +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDAPASW*GLRRSG
Trigger: CCCGGATCTACGCAGACCCCACCAAGAGGCTGGAGC...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACGCTCCAGCCTCTTGGTaGGGTCTGCGTAGATCCGGG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNAPASW*GLRRSG
Trigger: CCCGGATCTACGCAGACCCCACCAAGAGGCTGGAGC...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCTTGGCGCACACTGGGTaGCAGTATGGGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPLAHTG*QYGSLG
Trigger: GCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAA...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCAATGTGACCTCGGAGTaGGCCTCAGTGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPNVTSE*ASVPST
Trigger: GGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATT...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAAATGTGACCTCGGAGTaGGCCTCAGTGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPNVTSE*ASVPST
Trigger: GGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATT...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGATTCTCACCTGAGATaGGGGGATTGTTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPDSHLR*GDCCSL
Trigger: AAGGCTACAACAATCCCCCCATCTCAGGTGAGAATC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLFTAVG*LEVLLL
Trigger: GAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACAGGGAGGCCCAGCCTTaGGCCCTGTCACACGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNREAQP*ALSHVV
Trigger: GACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCT...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACGGCTGGATGCTGGGCTaGTTCATGGGTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNGWMLG*FMGGRA
Trigger: GGCTCTGCCACCCATGAACCAGCCCAGCATCCAGCC...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACTGCCACGTGAGACCATaGGCGAGGCTCCCCACGCTA +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDCHVRP*ARLPTL
Trigger: TAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCAGAGGGGCCTGGCTGTaGCCAAAGCTGTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPRGAWL*PKLCQT
Trigger: CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCT...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCAGAGGGGCCTGGCTGTaGCCAAAGCTGTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVARGAWL*PKLCQT
Trigger: CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCT...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGGAGCAAATGGCCCATaGGAGGGCCCATGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPGANGP*EGPCLR
Trigger: CCGAAGACATGGGCCCTCCCATGGGCCATTTGCTCC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAACCTCCAGGGAGCAAATaGCCCATGGGAGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKPPGSK*PMGGPM
Trigger: CATGGGCCCTCCCATGGGCCATTTGCTCCCTGGAGG...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS-3UTR CCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGACTCTCCTCCACGTCTaGGCTGCAGCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVTLLHV*AAASSG
Trigger: GCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGT...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCAACACACACAGCCCTaGGGCTTTGCACCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: WSGLREPECGNSSGNRQPQHTQP*GFAPEF
Trigger: GAACTCGGGTGCAAAGCCCCAGGGCTGTGTGTGTTG...GGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp CCAGGGCTGTGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACATGTGGGAACAGCTCTaGAAACCGCCAACCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGLWSGLREPECGNSSGNMWEQL*KPPTPA
Trigger: AGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACAT...GTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
3UTR CAA 72 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCTCAGGACCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYP*GMSLTPQDQRQ
Trigger: CTGCCTCTGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATCTCCATGTCAAATGTaGCCTCGGAGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSSPCQM*PRSGPQ
Trigger: CTGAGGCCCACTCCGAGGTCACATTTGACATGGAGA...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCTGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSCCALL*PASHWG
Trigger: CCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCA...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCGCCCCGTCATTGCGGTaGATGATCTTCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVAPSLR*MIFCNS
Trigger: AGAGTTGCAGAAGATCATTCACCGCAATGACGGGGC...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCCTCTTGGTGGGGTCTaGGTAGATCCGGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTPLGGV*VDPGDA
Trigger: GGCGTCTCCCGGATCTACGCAGACCCCACCAAGAGG...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAACCCAGCACCCCTTTCTaGCGCCTCGTTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKPSTPF*RLVLFL
Trigger: CAGGAAGAGAACGAGGCGGCAGAAAGGGGTGCTGGG...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCCCAGCACCCCTTTCTaGCGCCTCGTTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDPSTPF*RLVLFL
Trigger: CAGGAAGAGAACGAGGCGGCAGAAAGGGGTGCTGGG...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACCGCCTGCTTCCGTATaGACAGCCAAGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSPPASV*TAKYWK
Trigger: CTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACGTATGCTTGCCGCCTaGTTCCGTATGCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSRMLAA*FRMHSQ
Trigger: TTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACTGTGGCCAAAGCTGTaGCAAACGGTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSLWPKL*QTVGIQ
Trigger: CTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCCTCCACGTCTGGGCTaGAGCCTCCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTPPRLG*SLQWLL
Trigger: AAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGG...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGCGGTTGGCGCACACTaGGTGGCAGTATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTAVGAH*VAVWVL
Trigger: AAGGACCCATACTGCCACCCAGTGTGCGCCAACCGC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKTKMAL*GRRALL
Trigger: GAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCATCTGCCGATAGGGTaGCAAGGCCCCTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDHLPIG*QGPFPE
Trigger: TTCCGGGAAGGGGCCTTGCCACCCTATCGGCAGATG...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCATCTGCCGATAGGGTaGCAAGGCCCCTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTHLPIG*QGPFPE
Trigger: TTCCGGGAAGGGGCCTTGCCACCCTATCGGCAGATG...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACAGAGAGCAGGCCTCTTaGAGCGGATGGTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDREQAS*SGWSAG
Trigger: TCCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCT...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAGAGAGCAGGCCTCTTaGAGCGGATGGTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWREQAS*SGWSAG
Trigger: TCCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGAGAGAGCAGGCCTCTTaGAGCGGATGGTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVREQAS*SGWSAG
Trigger: TCCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCT...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAGAGAGCAGGCCTCTTaGAGCGGATGGTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKREQAS*SGWSAG
Trigger: TCCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTTCCGCCATCAGCCTTaGCTGAGCTGGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVFRHQP*LSWKRE
Trigger: CTCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAA...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGFTAVG*LEVLLL
Trigger: GAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAA...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTCACTGGCTGGATGCTaGGCTGGTTCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPSLAGC*AGSWVA
Trigger: TGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGA...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCTGGGTGCCCACTCACTaGCTGGATGCTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTWVPTH*LDAGLV
Trigger: AACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCA...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGTGGGTGCCCACTCACTaGCTGGATGCTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVWVPTH*LDAGLV
Trigger: AACCAGCCCAGCATCCAGCCAGTGAGTGGGCACCCA...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAGAGGGGCCTGGCTGTaGCCAAAGCTGTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWRGAWL*PKLCQT
Trigger: CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
3UTR CAA 72 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGCACTTCTTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKR*GSRAKGTSCHV
Trigger: CACGTGGCAAGAAGTGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTCTCCATGTCAAATGTaGCCTCGGAGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVASPCQM*PRSGPQ
Trigger: CTGAGGCCCACTCCGAGGTCACATTTGACATGGAGA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTTGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTCCALL*PASHWG
Trigger: CCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCA...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCTCAGGTCATGCATGGTaGCAAGCTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGSGHAW*QAGWMS
Trigger: AGACATCCAGCCAGCTTGTCACCATGCATGACCTGA...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCTCAGGTCATGCATGGTaGCAAGCTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: WSGLREPECGNSSGNRQPSGHAW*QAGWMS
Trigger: AGACATCCAGCCAGCTTGTCACCATGCATGACCTGA...GGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGAGTCCCTCAGTGTCTaGAGGCTGACCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPESLSV*RLTLSL
Trigger: CAAGCTCAAGGTCAGCCTTCAGACACTGAGGGACTC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342018.12
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAGGGAAGCAAGACCTTaGGCTTGTCTGGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWREARP*ACLGGR
Trigger: GCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAGGGAAGCAAGACCTTaGGCTTGTCTGGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKREARP*ACLGGR
Trigger: GCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ACTTGTCACCACCTCTTCGCCAGATGTCCCCAACACACACAGCCCTGGGGCTTTCAGGGGCGCCCACCTTaGGCTTGTACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TCHHLFARCPQHTQPWGFQGRPP*ACTCWK
Trigger: CTTCCAGCAAGTACAAGCTCAAGGTGGGCGCCCCTG...AAAGCCCCAGGGCTGTGTGTGTTGGGGACATCTGGCGAAGAGGTGGTGACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp TCGAGAAGGACAACCACATGCAGCTGCTGGTGCCAGACTTCCCTGAGACTTGTCGGAAACGTGAGCCAGTaGGGCTCCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRRTTTCSCWCQTSLRLVGNVSQ*GSCHSC
Trigger: GCAGCTGTGGCAGGAGCCTCACTGGCTCACGTTTCC...GACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCAGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSVGAAL*FDRQVT
Trigger: AGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTAC...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGVGAAL*FDRQVT
Trigger: AGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTAC...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGGAGCGGCTTGCGGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: WSGLREPECGNSSGNRQPVGAAL*FDRQVT
Trigger: AGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTAC...GGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCCGCAAGCCGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCACCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPPCFRS*MVTSWL
Trigger: CAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGG...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPPCFRS*MVTSWL
Trigger: CAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTGCAGGAATTCTCTaGCCCGTCATTGCGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVCAGIL*PVIAVN
Trigger: ATTCACCGCAATGACGGGGCAGAGAATTCCTGCACA...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCTTGGAGCGGATGGTCTaGCGGATCATGAGGGACATG +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPLERMV*RIMRDM
Trigger: CATGTCCCTCATGATCCGGCAGACCATCCGCTCCAA...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCAGTGCTAGGGTCAGCTaGACCCTTTGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPSARVS*TLCWDS
Trigger: AGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACT...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCTGTGGCCAAAGCTGTaGCAAACGGTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVALWPKL*QTVGIQ
Trigger: CTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCACAGCTCCAGCCTCTTaGTGGGGTCTGCGTAGATCC +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSTAPAS*WGLRRS
Trigger: GGATCTACGCAGACCCCACCAAGAGGCTGGAGCTGT...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACAGCGGCAGCTCCTGGTaGAAAAAGGCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNSGSSW*KKASFS
Trigger: CGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCT...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCAGCGGCAGCTCCTGGTaGAAAAAGGCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTSGSSW*KKASFS
Trigger: CGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCT...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCCCGGTGCTGGGTCTCTaGTCGGTAGAAGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSPVLGL*SVEVVH
Trigger: GTGGACTACTTCTACCGACCAGAGACCCAGCACCGG...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCGGTGCTGGGTCTCTaGTCGGTAGAAGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNPVLGL*SVEVVH
Trigger: GTGGACTACTTCTACCGACCAGAGACCCAGCACCGG...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGAGCCTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCTGCATGGTGACAAGCTaGCTGGATGTCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: GSLNVGTALETANPRWATCMVTS*LDVFLT
Trigger: CGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCA...GGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp CTGAATGTGGGAACAGCTCTGGAAACCGCCAACCCCCGCTGGGCAACCGCACTGGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGT +
Preference number: 4 (lower is better)
Translates to: LNVGTALETANPRWATALVLAGS*FPSTTR
Trigger: ACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTAC...CAGTGCGGTTGCCCAGCGGGGGTTGGCGGTTTCCAGAGCTGTTCCCACATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGCTCGTCGCTGGTCTTaGGGAGGCACCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAARRWS*GGTTHP
Trigger: GGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCATTCCGCCATCAGCCTTaGCTGAGCTGGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSFRHQP*LSWKRE
Trigger: CTCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAA...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCCACTGTGGGTGGCAATaGGGAGCCCCGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAHCGWQ*GAPAPS
Trigger: TGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNCWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTCWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACTGCTGGGCTGGTTCATaGGTGGCAGAGCCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDCWAGS*VAEPGY
Trigger: ATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACTCACTGGCTGGATGCTaGGCTGGTTCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDSLAGC*AGSWVA
Trigger: TGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGA...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGTCACTGGCTGGATGCTaGGCTGGTTCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVSLAGC*AGSWVA
Trigger: TGCCACCCATGAACCAGCCCAGCATCCAGCCAGTGA...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCACCTCCGGCATTTACTaGTCTCATCCTGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVTSGIY*SHPERH
Trigger: ATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGT...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGACCTCCGGCATTTACTaGTCTCATCCTGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLTSGIY*SHPERH
Trigger: ATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGT...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTAGAGGGGCCTGGCTGTaGCCAAAGCTGTGCCAAACG +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTRGAWL*PKLCQT
Trigger: CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCT...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAATTCCAGAGGGGCCTaGCTGTGGCCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWNSRGA*LWPKLC
Trigger: GCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAATTCCAGAGGGGCCTaGCTGTGGCCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKNSRGA*LWPKLC
Trigger: GCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGACCTTGAGCTTGTCTaGGTGGACGCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPDLELV*VDADVG
Trigger: GCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GAGACTTGTCACCACCTCTTCGCCAGATGTCCCCAACACACACAGCCCTGGGGCACCACATGCAGCTGCTaGTGCCAGACTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ETCHHLFARCPQHTQPWGTTCSC*CQTSLR
Trigger: TCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGT...GCCCCAGGGCTGTGTGTGTTGGGGACATCTGGCGAAGAGGTGGTGACAAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR TCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCACCTTGTCATACATTaGCGTATGCTTGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAHLVIH*RMLAAC
Trigger: GCAGGCGGCAAGCATACGTCAATGTATGACAAGGTG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCACCTTGTCATACATTaGCGTATGCTTGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPHLVIH*RMLAAC
Trigger: GCAGGCGGCAAGCATACGTCAATGTATGACAAGGTG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGTCTCGGGCCGGAGCATaGGCACCTTGTCATACATTG +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWSRAGA*APCHTL
Trigger: CAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGA...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGCCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLPHPQS*QRWHCG
Trigger: CCCACAATGCCATCTTTGTCAACTTTGAGGATGAGG...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTCAGGTCATGCATGGTaGCAAGCTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVASGHAW*QAGWMS
Trigger: AGACATCCAGCCAGCTTGTCACCATGCATGACCTGA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAATTACTGGTCTCATCCTaGGAGGCATTGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKLLVSS*EALGAH
Trigger: GTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAA...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGTTACTGGTCTCATCCTaGGAGGCATTGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWLLVSS*EALGAH
Trigger: GTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAA...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCTTACTGGTCTCATCCTaGGAGGCATTGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSLLVSS*EALGAH
Trigger: GTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAA...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCGCCTGCTTCCGTATaGACAGCCAAGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTPPASV*TAKYWK
Trigger: CTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGG...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCACATTGACGTATGCTTaGCGCCTGCTTCCGTATGCA +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGTLTYA*RLLPYA
Trigger: TGCATACGGAAGCAGGCGGCAAGCATACGTCAATGT...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTCATACATTGACGTATaGTTGCCGCCTGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVSYIDV*LPPASV
Trigger: TACGGAAGCAGGCGGCAAGCATACGTCAATGTATGA...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPVGAAL*FDRQVT
Trigger: AGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTAC...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNPCFRS*MVTSWL
Trigger: CAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGG...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCADGPRP*FRSCMV
Trigger: CACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTTGGAGCGGATGGTCTaGCGGATCATGAGGGACATG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNLERMV*RIMRDM
Trigger: CATGTCCCTCATGATCCGGCAGACCATCCGCTCCAA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCG +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSAKGTS*HVRPWA
Trigger: CGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGC...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCG +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDAKGTS*HVRPWA
Trigger: CGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGC...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGCTGTGGCCAAAGCTGTaGCAAACGGTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWLWPKL*QTVGIQ
Trigger: CTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAG...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCTGTGGCCAAAGCTGTaGCAAACGGTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTLWPKL*QTVGIQ
Trigger: CTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAG...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TCGAGAAGGACAACCACATGCAGCTGCTGGTGCCAGACTTCCCTGAGACTTGTCACAGCCCTGGGGCTTTaGACCCGAGTTCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: SRRTTTCSCWCQTSLRLVTALGL*TRVLTL
Trigger: GAGGGTGAGAACTCGGGTGCAAAGCCCCAGGGCTGT...GACAAGTCTCAGGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp CCAGGCTCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTGCCAGAAGAAGGACAACCACATaGAGCTGCTGGTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: PGSQRAREGQPHAAAGARRRTTT*SCWCQT
Trigger: AGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCT...TCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp GAGACTTGTCACCACCTCTTCGCCAGATGTCCCCAACACACACAGCCCTGGGGCCTGTCCTCCTGTGTGTaGCCAATTCCGATCATTCCC +
Preference number: 4 (lower is better)
Translates to: ETCHHLFARCPQHTQPWGLSSCV*PIPIIP
Trigger: GGGAATGATCGGAATTGGGCACACACAGGAGGACAG...GCCCCAGGGCTGTGTGTGTTGGGGACATCTGGCGAAGAGGTGGTGACAAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTACAGCTCCAGCCTCTTaGTGGGGTCTGCGTAGATCC +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTTAPAS*WGLRRS
Trigger: GGATCTACGCAGACCCCACCAAGAGGCTGGAGCTGT...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGT +
Preference number: 4 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPVLAGS*FPSTTR
Trigger: ACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTAC...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGT +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPVLAGS*FPSTTR
Trigger: ACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTAC...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGT +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPVLAGS*FPSTTR
Trigger: ACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTAC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGT +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAVLAGS*FPSTTR
Trigger: ACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTAC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCAGCCTTGGCTGAGCTaGAAAAGAGAGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVQPWLS*KREQAS
Trigger: AGAGGCCTGCTCTCTTTTCCAGCTCAGCCAAGGCTG...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNFTAVG*LEVLLL
Trigger: GAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCGCTGTGCCAAACGGTTaGGATCCAGAGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAAVPNG*DPELKA
Trigger: TGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGC...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCACTCTCCTCCACGTCTaGGCTGCAGCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCATLLHV*AAASSG
Trigger: GCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGT...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCTTGAGCTTGTCTGGGTaGACGCTGATGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPLSLSG*TLMLAL
Trigger: CAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAA...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCACCTTGTCATACATTaGCGTATGCTTGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDHLVIH*RMLAAC
Trigger: GCAGGCGGCAAGCATACGTCAATGTATGACAAGGTG...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSPHPQS*QRWHCG
Trigger: CCCACAATGCCATCTTTGTCAACTTTGAGGATGAGG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTCAGGTCATGCATGGTaGCAAGCTGGCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNSGHAW*QAGWMS
Trigger: AGACATCCAGCCAGCTTGTCACCATGCATGACCTGA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCGCCCCGTCATTGCGGTaGATGATCTTCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSAPSLR*MIFCNS
Trigger: AGAGTTGCAGAAGATCATTCACCGCAATGACGGGGC...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCTGTAGACAGAGTCCTTaGGCTTGTACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGCRQSP*ACTCWK
Trigger: CTTCCAGCAAGTACAAGCTCAAGGACTCTGTCTACA...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372097.10
ENST00000372099.10
CDS-3UTR GCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCGTATGCTTGCCGCCTaGTTCCGTATGCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTRMLAA*FRMHSQ
Trigger: TTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACG...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAATCGAATCCATAGGCTaGGCCAGGGGCCTGTTATCA +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKIESIG*ARGLLS
Trigger: TGATAACAGGCCCCTGGCGCAGCCTATGGATTCGAT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACATCGAATCCATAGGCTaGGCCAGGGGCCTGTTATCA +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNIESIG*ARGLLS
Trigger: TGATAACAGGCCCCTGGCGCAGCCTATGGATTCGAT...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCGATTCTCACCTGAGATaGGGGGATTGTTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGDSHLR*GDCCSL
Trigger: AAGGCTACAACAATCCCCCCATCTCAGGTGAGAATC...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCATKMAL*GRRALL
Trigger: GAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGT...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCGAATCCATAGGTGCTTaGGCACCTCCTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPESIGA*APPHPQ
Trigger: TTGAGGATGAGGAGGTGCCCAAGCACCTATGGATTC...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS-3UTR CCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGCATGGTGACAAGCTaGCTGGATGTCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVACMVTS*LDVFLT
Trigger: CGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCAGCCTTGGCTGAGCTaGAAAAGAGAGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTQPWLS*KREQAS
Trigger: AGAGGCCTGCTCTCTTTTCCAGCTCAGCCAAGGCTG...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACTTCCGCCATCAGCCTTaGCTGAGCTGGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDFRHQP*LSWKRE
Trigger: CTCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAA...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAATTCCGCCATCAGCCTTaGCTGAGCTGGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKFRHQP*LSWKRE
Trigger: CTCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAA...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACCTCCGGCATTTACTaGTCTCATCCTGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPTSGIY*SHPERH
Trigger: ATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGCTGTGCCAAACGGTTaGGATCCAGAGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTAVPNG*DPELKA
Trigger: TGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGTTGAGCTTGTCTGGGTaGACGCTGATGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWLSLSG*TLMLAL
Trigger: CAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAA...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTGACCTTGAGCTTGTCTaGGTGGACGCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTDLELV*VDADVG
Trigger: GCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTC...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCCGTCATTGCGGTGAATaGTCTTCTGCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPRHCGE*SSATLP
Trigger: TGGAAGAGTTGCAGAAGATCATTCACCGCAATGACG...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCCGTCATTGCGGTGAATaGTCTTCTGCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HAISTTTVMRAKRDWPVARHCGE*SSATLP
Trigger: TGGAAGAGTTGCAGAAGATCATTCACCGCAATGACG...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGCCATCAGCCTTGGCTaGGCTGGAAAAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAAISLG*AGKESR
Trigger: CCTGCTCTCTTTTCCAGCTCAGCCAAGGCTGATGGC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GAGACTTGTCACCACCTCTTCGCCAGATGTCCCCAACACACACAGCCCTGGGGCTCAGTGTCTGAAGGCTaGCCTAAAAGGAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ETCHHLFARCPQHTQPWGSVSEG*PKRKQG
Trigger: ACCTTGCTTCCTTTTAGGTCAGCCTTCAGACACTGA...GCCCCAGGGCTGTGTGTGTTGGGGACATCTGGCGAAGAGGTGGTGACAAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR GCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCACATTGACGTATGCTTaGCGCCTGCTTCCGTATGCA +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSTLTYA*RLLPYA
Trigger: TGCATACGGAAGCAGGCGGCAAGCATACGTCAATGT...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTCATACATTGACGTATaGTTGCCGCCTGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPSYIDV*LPPASV
Trigger: TACGGAAGCAGGCGGCAAGCATACGTCAATGTATGA...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp CAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGACTCTAGCTGTGCAGGAATTCTCTaGCCCGTCATTGCGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QHVTASARVSCTLCWDSSCAGIL*PVIAVN
Trigger: ATTCACCGCAATGACGGGGCAGAGAATTCCTGCACA...GCTAGAGTCCCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTATCGAATCCATAGGCTaGGCCAGGGGCCTGTTATCA +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTIESIG*ARGLLS
Trigger: TGATAACAGGCCCCTGGCGCAGCCTATGGATTCGAT...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCCCGGTGCTGGGTCTCTaGTCGGTAGAAGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAPVLGL*SVEVVH
Trigger: GTGGACTACTTCTACCGACCAGAGACCCAGCACCGG...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCTGCATGGTGACAAGCTaGCTGGATGTCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTCMVTS*LDVFLT
Trigger: CGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCA...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAATTCCAGAGGGGCCTaGCTGTGGCCAAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCANSRGA*LWPKLC
Trigger: GCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATT...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTCTCGGGCCGGAGCATaGGCACCTTGTCATACATTG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCASRAGA*APCHTL
Trigger: CAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGCGTCATTGCGGTGAATaGTCTTCTGCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWRHCGE*SSATLP
Trigger: TGGAAGAGTTGCAGAAGATCATTCACCGCAATGACG...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCGTCATTGCGGTGAATaGTCTTCTGCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTRHCGE*SSATLP
Trigger: TGGAAGAGTTGCAGAAGATCATTCACCGCAATGACG...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTTACTGGTCTCATCCTaGGAGGCATTGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCALLVSS*EALGAH
Trigger: GTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGAGGGAAGCAAGACCTTaGGCTTGTCTGGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTREARP*ACLGGR
Trigger: GCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCT...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTGTAGACAGAGTCCTTaGGCTTGTACTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNCRQSP*ACTCWK
Trigger: CTTCCAGCAAGTACAAGCTCAAGGACTCTGTCTACA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372097.10
ENST00000372099.10
CDS-3UTR GCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCTCATACATTGACGTATaGTTGCCGCCTGCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTSYIDV*LPPASV
Trigger: TACGGAAGCAGGCGGCAAGCATACGTCAATGTATGA...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR GCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTTGTGCAGGAATTCTCTaGCCCGTCATTGCGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTCAGIL*PVIAVN
Trigger: ATTCACCGCAATGACGGGGCAGAGAATTCCTGCACA...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGCTGAGAGGCATTGGGTaGCCACTCACTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTLRGIG*PLTGWM
Trigger: CATCCAGCCAGTGAGTGGGCACCCAATGCCTCTCAG...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGCTAAAGGCACTTCTTaGCACGTGAGACCATGGGCG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAAKGTS*HVRPWA
Trigger: CGCCCATGGTCTCACGTGGCAAGAAGTGCCTTTAGC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGCACTGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTHWVAV*VLGPEV
Trigger: TACTTCCGGCCCAAGGACCCATACTGCCACCCAGTG...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGGATTCTCACCTGAGATaGGGGGATTGTTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: STKQHVTASARVSCTLCWDSHLR*GDCCSL
Trigger: AAGGCTACAACAATCCCCCCATCTCAGGTGAGAATC...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGATTCTCACCTGAGATaGGGGGATTGTTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTDSHLR*GDCCSL
Trigger: AAGGCTACAACAATCCCCCCATCTCAGGTGAGAATC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAFTAVG*LEVLLL
Trigger: GAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTCATTTCGGGACCAGATaGGACGGATGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTHFGTR*DGCQTA
Trigger: AGCTGTTTGACATCCGTCCCATCTGGTCCCGAAATG...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGTGTAAATGGTGGAGATaGTGCCAAGGATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVCKWWR*CQGSPC
Trigger: ACATGGAGATCCTTGGCATCATCTCCACCATTTACA...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCGCCCCGTCATTGCGGTaGATGATCTTCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAAPSLR*MIFCNS
Trigger: AGAGTTGCAGAAGATCATTCACCGCAATGACGGGGC...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTTGAGCTTGTCTGGGTaGACGCTGATGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCALSLSG*TLMLAL
Trigger: CAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTTGTAAATGGTGGAGATaGTGCCAAGGATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTCKWWR*CQGSPC
Trigger: ACATGGAGATCCTTGGCATCATCTCCACCATTTACA...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGCCCCGTCATTGCGGTaGATGATCTTCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTAPSLR*MIFCNS
Trigger: AGAGTTGCAGAAGATCATTCACCGCAATGACGGGGC...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR GCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTVGAAL*FDRQVT
Trigger: AGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTAC...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTGCATGGTGACAAGCTaGCTGGATGTCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCACMVTS*LDVFLT
Trigger: CGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCACCTCCGGCATTTACTaGTCTCATCCTGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCATSGIY*SHPERH
Trigger: ATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGT...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGCTGTGCCAAACGGTTaGGATCCAGAGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTAVPNG*DPELKA
Trigger: TGCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGC...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCCATTTCGGGACCAGATaGGACGGATGTCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAHFGTR*DGCQTA
Trigger: AGCTGTTTGACATCCGTCCCATCTGGTCCCGAAATG...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGTGCATGGTGACAAGCTaGCTGGATGTCTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTCMVTS*LDVFLT
Trigger: CGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCA...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR TCA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGTGTAAATGGTGGAGATaGTGCCAAGGATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTCKWWR*CQGSPC
Trigger: ACATGGAGATCCTTGGCATCATCTCCACCATTTACA...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS CCA 90 bp CCCCCAGCCCCAAATCGGCCGCCTCCGCCGCCATCCCTGTGCGTCTaGCAGGGCCCGCCAGGGTCCGTCCCACAAAGTACTCCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PPAPNRPPPPPSLCV*QGPPGSVPQSTPKG
Trigger: GCCTTTGGGAGTACTTTGTGGGACGGACCCTGGCGGGCCCTGCCAGACGCACAGGGATGGCGGCGGAGGCGGCCGATTTGGGGCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS CCA 90 bp TGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTaGCCGGGTCAGGGAGGCCCAGCCTTGGGCCCTGTCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: WQWGAPAPSLGQTPV*PGQGGPALGPVTRS
Trigger: ACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CCA 90 bp CCGGGCTCAGCAAGACGCGAGGGCCTCCAGGGAGCAAATGGCCCATaGGAGGGCCCATGTCTTCGGGAAAACGACCGCCGTGTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: PGSARREGLQGANGP*EGPCLRENDRRVLD
Trigger: GTCGAGGACACGGCGGTCGTTTTCCCGAAGACATGGGCCCTCCCATGGGCCATTTGCTCCCTGGAGGCCCTCGCGTCTTGCTGAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372099.10
ENST00000440319.5
CDS CCA 90 bp CTGGCCTCCAGGGGCGCCCACCTTGAGCTTGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LASRGAHLELVLAGS*FPSTTRPRRAQALL
Trigger: AAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGTGGGCGCCCCTGGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CAA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCTGGCAGTATGGGTCCTaGGGCCGGAAGTACAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPWQYGS*GRKYSS
Trigger: GGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCA...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGTGCTGCGCTTTGCTTaGACCGGCAAGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPVLRFA*TGKSLG
Trigger: CCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCAC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCTGCCGTCGGATGGCTaGAAGTCCTCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGLPSDG*KSSSSS
Trigger: AGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 5 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCGGGTGGACGCTGATGTaGGCCTTGACAGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPGWTLM*ALTAFR
Trigger: CCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCC...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGCTCCCAAAGGGCTCCACAGCCCTGGGGCTTaGCACCCGAGTTCTCACCCT +
Preference number: 5 (lower is better)
Translates to: SFPEWSRGSVGAQAPKGLHSPGA*HPSSHP
Trigger: AGGGTGAGAACTCGGGTGCAAAGCCCCAGGGCTGTG...GAGCCCTTTGGGAGCCTGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CAA 90 bp GTGTGCCCAATTCCGATCATTCCCGGAGTGGTCACGTGGCTCAGTGGGGGCCCAGGGCTGTGGAGCGGCTaGCGGGAGCCTGAATGTGGG +
Preference number: 5 (lower is better)
Translates to: VCPIPIIPGVVTWLSGGPGLWSG*REPECG
Trigger: CCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCCC...TGGGCCCCCACTGAGCCACGTGACCACTCCGGGAATGATCGGAATTGGGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CAA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCTCCAGTGGCTGCTaGGGCACCTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLASSGC*GTSSSS
Trigger: TGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGC...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCACGCTGATGTTGGCCTaGACAGCATTTCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPTLMLA*TAFRDQ
Trigger: CTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGT...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS GCA 90 bp CGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTGCTTCAGGTCATaGATGGTGACAAGCTGGCTGGATGTCTTCTTGACGGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: RAPLVPDGPRPCFRS*MVTSWLDVFLTVMG
Trigger: CCCCATCACCGTCAAGAAGACATCCAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS CCA 90 bp CAGGCTGCTGGTACTGAAGCGGTTGGCGCACACTGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTACAGCTCCAGCCTCTTGGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QAAGTEAVGAHWVAV*VLGPEVQLQPLGGV
Trigger: GACCCCACCAAGAGGCTGGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 90 bp CGGAGCAGCAGGCTGCTGGTACTGAAGCGGTTGGCGCACACTGGGTaGCAGTATGGGTCCTTGGGCCGGAAGTACAGCTCCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RSSRLLVLKRLAHTG*QYGSLGRKYSSSLL
Trigger: CAAGAGGCTGGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGCTGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 90 bp GATGCGGAGCAGCAGGCTGCTGGTACTGAAGCGGTTGGCGCACACTaGGTGGCAGTATGGGTCCTTGGGCCGGAAGTACAGCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: DAEQQAAGTEAVGAH*VAVWVLGPEVQLQP
Trigger: AGGCTGGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGCTGCTCCGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 90 bp TCCACCTTCCGGTCCACGGGGTTAGTGCAGACTCTCCTCCACGTCTaGGCTGCAGCCTCCAGTGGCTGCTTGGGCACCTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: STFRSTGLVQTLLHV*AAASSGCLGTSSSS
Trigger: TGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGCACTAACCCCGTGGACCGGAAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS-3UTR CAA 90 bp GCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCACCTTGTCATACATaGACGTATGCTTGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: APAPSLGQTPVWPGQGGPAPCHT*TYACRL
Trigger: CAGGCGGCAAGCATACGTCAATGTATGACAAGGTGC...TGGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCC +
Preference number: 5 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPSSSLV*GRHHPS
Trigger: GGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCT...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGSCAKR*GSRAKG
Trigger: GCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCT...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGAGGCCCAAGGCCTCGCCTCAATaGTTCCGCGAAGGAATCGTT +
Preference number: 5 (lower is better)
Translates to: SPGSLIRPDTSLAGSGRPKASPQ*FREGIV
Trigger: AACGATTCCTTCGCGGAACAATTGAGGCGAGGCCTT...GGGCCTCCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS-3UTR CAA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTGGCTGGATGTCTTCTaGACGGTGATGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLWLDVF*TVMGRL
Trigger: CAGCCTCCCCATCACCGTCAAGAAGACATCCAGCCA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AAGGCTGACCTAAAAGGAAGCAAGGTGCCGAGGCCCCGGTGGGCAGAGCTGCCCTGGCTGGATGTCTTCTaGACGGTGATGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KADLKGSKVPRPRWAELPWLDVF*TVMGRL
Trigger: CAGCCTCCCCATCACCGTCAAGAAGACATCCAGCCA...GGGCAGCTCTGCCCACCGGGGCCTCGGCACCTTGCTTCCTTTTAGGTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CAA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCC +
Preference number: 5 (lower is better)
Translates to: STKQHVTASARVSCTLCWSSSLV*GRHHPS
Trigger: GGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCC +
Preference number: 5 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKSSSLV*GRHHPS
Trigger: GGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCC +
Preference number: 5 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDSSSLV*GRHHPS
Trigger: GGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCT...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCAAGAGAGCAGGCCTCTaGGAGCGGATGGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPKRAGL*ERMVCR
Trigger: CCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCTT...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCAAGAGAGCAGGCCTCTaGGAGCGGATGGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPKRAGL*ERMVCR
Trigger: CCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCTT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCCTGCCGTCGGATGGCTaGAAGTCCTCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGLPSDG*KSSSSS
Trigger: AGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAG...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAACAGGGAGGCCCAGCCTaGGGCCCTGTCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKQGGPA*GPVTRS
Trigger: ACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTG...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGCAGGGAGGCCCAGCCTaGGGCCCTGTCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: STKQHVTASARVSCTLCWQGGPA*GPVTRS
Trigger: ACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTG...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCAGGGAGGCCCAGCCTaGGGCCCTGTCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTQGGPA*GPVTRS
Trigger: ACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTG...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 5 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS TCA 90 bp CTGCAGCCTCCAGTGGCTGCTTGGGCACCTCCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGGGGCGCCGGGCTCTGCTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: LQPPVAAWAPPHPQS*QRWHCGGAGLCSGQ
Trigger: TTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS GCA 90 bp TCAAATGTGACCTCGGAGTGGGCCTCAGTGCCCAGCACCCCTTTCTaGCGCCTCGTTCTCTTCCTGATGCGGAGCAGCAGGCTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SNVTSEWASVPSTPF*RLVLFLMRSSRLLV
Trigger: TACCAGCAGCCTGCTGCTCCGCATCAGGAAGAGAACGAGGCGGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS GCA 90 bp GAAGCTGGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTGACAAGCTGGCTGGATGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: EAGFRAPLVPDGPRP*FRSCMVTSWLDVFL
Trigger: CAAGAAGACATCCAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS GCA 90 bp CTTCCGGTCCACGGGGTTAGTGCAGACTCTCCTCCACGTCTGGGCTaGAGCCTCCAGTGGCTGCTTGGGCACCTCCTCATCCTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: LPVHGVSADSPPRLG*SLQWLLGHLLILKV
Trigger: AACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGCACTAACCCCGTGGACCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 90 bp CCTCAGTGTCTGAAGGCTGACCTTGAGCTTGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PQCLKADLELVLAGS*FPSTTRPRRAQALL
Trigger: AAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGTCAGCCTTCAGACACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372108.9
ENST00000461871.1
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGCAGTATGGGTCCTaGGGCCGGAAGTACAGCTCC +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAWQYGS*GRKYSS
Trigger: GGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGCGGAGCATGAGCACCTaGTCATACATTGACGTATGC +
Preference number: 5 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGRSMST*SYIDVC
Trigger: GCATACGTCAATGTATGACAAGGTGCTCATGCTCCG...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVALTKMA*WGRRAL
Trigger: CAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCATTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPLTKMA*WGRRAL
Trigger: CAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAA...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGTGCTGCGCTTTGCTTaGACCGGCAAGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPVLRFA*TGKSLG
Trigger: CCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCAC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAAGAGAGCAGGCCTCTaGGAGCGGATGGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: STKQHVTASARVSCTLCWKRAGL*ERMVCR
Trigger: CCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCTT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACAAGAGAGCAGGCCTCTaGGAGCGGATGGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDKRAGL*ERMVCR
Trigger: CCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCTT...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCCTGCCGTCGGATGGCTaGAAGTCCTCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPLPSDG*KSSSSS
Trigger: AGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAG...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAGCCTCCAGTGGCTGCTaGGGCACCTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKASSGC*GTSSSS
Trigger: TGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGC...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGAGCAAGACCTTGAGCTaGTCTGGGTGGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLSKTLS*SGWTLM
Trigger: CATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCT...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS TCA 90 bp GCGGCAGCTCCTGGTGGAAAAAGGCCTCCTTCTCGGGCCGGAGCATaGGCACCTTGTCATACATTGACGTATGCTTGCCGCCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: AAAPGGKRPPSRAGA*APCHTLTYACRLLP
Trigger: CGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS CCA 90 bp CCGGAAGATGTAGACAGAGTCCTTGAGCTTGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PEDVDRVLELVLAGS*FPSTTRPRRAQALL
Trigger: AAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGACTCTGTCTACATCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372097.10
ENST00000372099.10
CDS-3UTR CAA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTGGCAGTATGGGTCCTaGGGCCGGAAGTACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNWQYGS*GRKYSS
Trigger: GGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTACATTGACGTATGCTaGCCGCCTGCTTCCGTATGC +
Preference number: 5 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLYIDVC*PPASVC
Trigger: GCATACGGAAGCAGGCGGCAAGCATACGTCAATGTA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCCGAATCCATAGGTGCTaGGGCACCTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGRIHRC*GTSSSS
Trigger: TGAGGATGAGGAGGTGCCCAAGCACCTATGGATTCG...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS-3UTR CAA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCGTGCTGCGCTTTGCTTaGACCGGCAAGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTVLRFA*TGKSLG
Trigger: CCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCAC...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTGCCAGACTTCCCGTGCTGCGCTTTGCTTaGACCGGCAAGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: SQRAREGQPHAAAGARLPVLRFA*TGKSLG
Trigger: CCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCAC...GGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGCTGGATGTCTTCTaGACGGTGATGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAWLDVF*TVMGRL
Trigger: CAGCCTCCCCATCACCGTCAAGAAGACATCCAGCCA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGTTTCCGCCATCAGCCTaGGCTGAGCTGGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LWVAMGSPGSLIRPDTSLFPPSA*AELEKR
Trigger: TCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAAA...CAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CACTGTGGGTGGCAATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTTTCCGCCATCAGCCTaGGCTGAGCTGGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: HCGWQWGAPAPSLGQTPVFPPSA*AELEKR
Trigger: TCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAAA...GACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCATTGCCACCCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCGGGTGGACGCTGATGTaGGCCTTGACAGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPGWTLM*ALTAFR
Trigger: CCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCC...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TCCCAAAGGGCTCGAGAAGGACAACCACATGCAGCTGCTGGTGCCAGACTTCCCCCAGGGGCGCCCACCTaGAGCTTGTACTTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SQRAREGQPHAAAGARLPPGAPT*SLYLLE
Trigger: TTCCAGCAAGTACAAGCTCAAGGTGGGCGCCCCTGG...GGGAAGTCTGGCACCAGCAGCTGCATGTGGTTGTCCTTCTCGAGCCCTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS CCA 90 bp GGGGTTAGTGCAGACTCTCCTCCACGTCTGGGCTGCAGCCTCCAGTaGCTGCTTGGGCACCTCCTCATCCTCAAAGTTGACAAAGATGGC +
Preference number: 5 (lower is better)
Translates to: GVSADSPPRLGCSLQ*LLGHLLILKVDKDG
Trigger: GCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGCACTAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS-3UTR CAA 90 bp ATGGGGAGCCCCGGCTCCCTCATTAGGCCAGACACCAGTCTGGCCGGGTCAGGGTCGGAAATCGAGGACTaGATAAATCTTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: MGSPGSLIRPDTSLAGSGSEIED*INLGIW
Trigger: CCAGATGCCAAGATTTATCAAGTCCTCGATTTCCGA...CCCTGACCCGGCCAGACTGGTGTCTGGCCTAATGAGGGAGCCGGGGCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCCAGGGAGGCCCAGCCTaGGGCCCTGTCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAQGGPA*GPVTRS
Trigger: ACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTG...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 5 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPSCAKR*GSRAKG
Trigger: GCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPSCAKR*GSRAKG
Trigger: GCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCT...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCACGCTGATGTTGGCCTaGACAGCATTTCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVATLMLA*TAFRDQ
Trigger: CTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGT...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACGGGTGGACGCTGATGTaGGCCTTGACAGCATTTCGG +
Preference number: 5 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDGWTLM*ALTAFR
Trigger: CCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCC...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAAAGGGAAGCAAGACCTaGAGCTTGTCTGGGTGGACG +
Preference number: 5 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPKGSKT*SLSGWT
Trigger: CGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTT...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp CCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCAAGGGAAGCAAGACCTaGAGCTTGTCTGGGTGGACG +
Preference number: 5 (lower is better)
Translates to: PSSTSGIYWSHPERHWVPKGSKT*SLSGWT
Trigger: CGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTT...GGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS TCA 90 bp AACCCACATGTCCCACAGTCACGTTCTTTGCACTGTCCTCAGGACTaGGGCCAACCTGGCGATCACACAGGCCACCGCTTACTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: NPHVPQSRSLHCPQD*GQPGDHTGHRLLRP
Trigger: GGGCCTTAGTAAGCGGTGGCCTGTGTGATCGCCAGGTTGGCCTCAGTCCTGAGGACAGTGCAAAGAACGTGACTGTGGGACATGTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485692.1
CDS CCA 90 bp GTGGAGATGATGCCAAGGATCTCCATGTCAAATGTGACCTCGGAGTaGGCCTCAGTGCCCAGCACCCCTTTCTGCCGCCTCGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VEMMPRISMSNVTSE*ASVPSTPFCRLVLF
Trigger: GAAGAGAACGAGGCGGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATTTGACATGGAGATCCTTGGCATCATCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS-3UTR CAA 90 bp ATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTGGGGCCGGAGCATGAGCACCTaGTCATACATTGACGTATGC +
Preference number: 5 (lower is better)
Translates to: ISTTTVMRAKRDWPVAWGRSMST*SYIDVC
Trigger: GCATACGTCAATGTATGACAAGGTGCTCATGCTCCG...GCCCCAGGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCCACGTGAGACCATGGGCGAGGCTCCCCACGCTATCTCCACCACCACAGTCACGGAGCATGAGCACCTaGTCATACATTGACGTATGC +
Preference number: 5 (lower is better)
Translates to: CHVRPWARLPTLSPPPQSRSMST*SYIDVC
Trigger: GCATACGTCAATGTATGACAAGGTGCTCATGCTCCG...TGACTGTGGTGGTGGAGATAGCGTGGGGAGCCTCGCCCATGGTCTCACGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACCAAGGCTGACCTTGAGCTaGTACTTGCTGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GWQSQGIPFGDVPNPSGPRLTLS*YLLEAG
Trigger: ACCAGCTTCCAGCAAGTACAAGCTCAAGGTCAGCCT...TGGTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342018.12
ENST00000372108.9
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTTTCCGCCATCAGCCTaGGCTGAGCTGGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVAFPPSA*AELEKR
Trigger: TCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAAA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAGCTGTGCCAAACGGTaGGGATCCAGAGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKSCAKR*GSRAKG
Trigger: GCCTTTAGCTCTGGATCCCAACCGTTTGGCACAGCT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACACGCTGATGTTGGCCTaGACAGCATTTCGGGACCAG +
Preference number: 5 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNTLMLA*TAFRDQ
Trigger: CTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGT...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGTTGGGATCCAGAGCTAAAAGCAAGACCTTGAGCTaGTCTGGGTGGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: EGPGCGQSCAKRLGSRAKSKTLS*SGWTLM
Trigger: CATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCT...TTTAGCTCTGGATCCCAACCGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCACCAAGCAGCATGTCACAGCCAGTGCTAGGGTCAGCTGCACCCTTTGCTGGAGCAAGACCTTGAGCTaGTCTGGGTGGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: STKQHVTASARVSCTLCWSKTLS*SGWTLM
Trigger: CATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCT...CCAGCAAAGGGTGCAGCTGACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACAAGGGAAGCAAGACCTaGAGCTTGTCTGGGTGGACG +
Preference number: 5 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNKGSKT*SLSGWT
Trigger: CGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTT...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ACTTGTCACCACCTCTTCGCCAGATGTCCCCAACACACACAGCCCTGGGGCTTTGCGCCCACCTTGAGCTaGTACTTGCTGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TCHHLFARCPQHTQPWGFAPTLS*YLLEAG
Trigger: ACCAGCTTCCAGCAAGTACAAGCTCAAGGTGGGCGC...AAAGCCCCAGGGCTGTGTGTGTTGGGGACATCTGGCGAAGAGGTGGTGACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS CCA 90 bp TGCTTGGGCACCTCCTCATCCTCAAAGTTGACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTCAGGCCAATCAGATTCTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: CLGTSSSSKLTKMAL*GRRALLRPIRFSPE
Trigger: CTCAGGTGAGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGTACATTGACGTATGCTaGCCGCCTGCTTCCGTATGC +
Preference number: 5 (lower is better)
Translates to: LPSSTSGIYWSHPERHWVYIDVC*PPASVC
Trigger: GCATACGGAAGCAGGCGGCAAGCATACGTCAATGTA...CACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACGCACCTTGTCATACATaGACGTATGCTTGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDAPCHT*TYACRL
Trigger: CAGGCGGCAAGCATACGTCAATGTATGACAAGGTGC...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCALTKMA*WGRRAL
Trigger: CAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp GGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACTTTCCGCCATCAGCCTaGGCTGAGCTGGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: GLVHGWQSQGIPFGDVPNFPPSA*AELEKR
Trigger: TCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAAA...GTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS TCA 90 bp AAAGGCCTCCTTCTCGGGCCGGAGCATGAGCACCTTGTCATACATTaGCGTATGCTTGCCGCCTGCTTCCGTATGCACAGCCAAGTACTG +
Preference number: 5 (lower is better)
Translates to: KGLLLGPEHEHLVIH*RMLAACFRMHSQVL
Trigger: CAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS TCA 90 bp CAAATCGAATCCATAGGTGCTTGGGCACCTCCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGGGGCGCCGGGCTCTGCTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: QIESIGAWAPPHPQS*QRWHCGGAGLCSGQ
Trigger: TTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCACCTATGGATTCGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS GCA 90 bp CTTCTTGACGGTGATGGGGAGGCTGTAGTTGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACTGGGGGCGTAACCGTGTTTCATTCC +
Preference number: 5 (lower is better)
Translates to: LLDGDGEAVVVGAAL*FDRQVTGGVTVFHS
Trigger: GGAATGAAACACGGTTACGCCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTACAACTACAGCCTCCCCATCACCGTCAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS GCA 90 bp TTAGTGCAGACTCTCCTCCACGTCTGGGCTGCAGCCTCCAGTGGCTaGTTGGGCACCTCCTCATCCTCAAAGTTGACAAAGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: LVQTLLHVWAAASSG*LGTSSSSKLTKMAL
Trigger: CAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS-3UTR CAA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTLTKMA*WGRRAL
Trigger: CAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAA...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp ACTGGTTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCTGGCTGGATGTCTTCTaGACGGTGATGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGLIRTIPEGPGCGQSCAWLDVF*TVMGRL
Trigger: CAGCCTCCCCATCACCGTCAAGAAGACATCCAGCCA...GGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp AGCTCCACCTCCGGCATTTACTGGTCTCATCCTGAGAGGCATTGGGTGCCCACTAGGCTGACCTTGAGCTaGTACTTGCTGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SSTSGIYWSHPERHWVPTRLTLS*YLLEAG
Trigger: ACCAGCTTCCAGCAAGTACAAGCTCAAGGTCAGCCT...AGTGGGCACCCAATGCCTCTCAGGATGAGACCAGTAAATGCCGGAGGTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342018.12
ENST00000372108.9
CDS-3UTR CAA 90 bp ATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCCCTCAGGACACAGAGTCCTTGAGCTaGTACTTGCTGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: MGGRARVYPLGMSLTPQDTESLS*YLLEAG
Trigger: ACCAGCTTCCAGCAAGTACAAGCTCAAGGACTCTGT...GTCCTGAGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372097.10
ENST00000372099.10
CDS-3UTR CAA 90 bp GGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTAACCACAGAGTCCTTGAGCTaGTACTTGCTGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GWFMGGRARVYPLGMSLTTESLS*YLLEAG
Trigger: ACCAGCTTCCAGCAAGTACAAGCTCAAGGACTCTGT...GGTTAGGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372097.10
ENST00000372099.10
CDS TCA 90 bp CCAGAATCTCTGTCTCCATTTCGTTTTCACTGCCGTCGGATGGCTTaGAGTCCTCCTCCTCCTCTTCCTCCTCCTCCTCATCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: PESLSPFRFHCRRMA*SPPPPLPPPPHPPR
Trigger: ACGAGGAGGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAGAGATTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 90 bp TCCTTCTCGGGCCGGAGCATGAGCACCTTGTCATACATTGACGTATaGTTGCCGCCTGCTTCCGTATGCACAGCCAAGTACTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SFSGRSMSTLSYIDV*LPPASVCTAKYWKS
Trigger: TGACTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS GCA 90 bp GGTCTTGGGGAGGCACCACCCATCCCGTTCTGTGCAGGAATTCTCTaGCCCGTCATTGCGGTGAATGATCTTCTGCAACTCTTCCACATT +
Preference number: 5 (lower is better)
Translates to: GLGEAPPIPFCAGIL*PVIAVNDLLQLFHI
Trigger: AATGTGGAAGAGTTGCAGAAGATCATTCACCGCAATGACGGGGCAGAGAATTCCTGCACAGAACGGGATGGGTGGTGCCTCCCCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 90 bp AGCACCTTGTCATACATTGACGTATGCTTGCCGCCTGCTTCCGTATaGACAGCCAAGTACTGGAAGTCAGACATCCCCGGGAGACGCCTT +
Preference number: 5 (lower is better)
Translates to: STLSYIDVCLPPASV*TAKYWKSDIPGRRL
Trigger: AAGGCGTCTCCCGGGGATGTCTGACTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439697.1
ENST00000485692.1
CDS-3UTR CAA 90 bp CACGCTATCTCCACCACCACAGTCATGAGAGCCAAGCGAGACTGGCCTGTGGCCTCGGAAATCGAGGACTaGATAAATCTTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: HAISTTTVMRAKRDWPVASEIED*INLGIW
Trigger: CCAGATGCCAAGATTTATCAAGTCCTCGATTTCCGA...GGCCACAGGCCAGTCTCGCTTGGCTCTCATGACTGTGGTGGTGGAGATAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TGCTGGGCTGGTTCATGGGTGGCAGAGCCAGGGTATACCCTTTGGGGATGTCCCTCGGAAATCGAGGACTaGATAAATCTTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: CWAGSWVAEPGYTLWGCPSEIED*INLGIW
Trigger: CCAGATGCCAAGATTTATCAAGTCCTCGATTTCCGA...GGGACATCCCCAAAGGGTATACCCTGGCTCTGCCACCCATGAACCAGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS-3UTR CAA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGGCCAGGGTATACCCTTaGGGGATGTCCCTAACCCCT +
Preference number: 5 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTARVYP*GMSLTP
Trigger: AGGGGTTAGGGACATCCCCAAAGGGTATACCCTGGC...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS CCA 90 bp GTAGTCCAGAATCTCTGTCTCCATTTCGTTTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTCCTCTTCCTCCTCCTCCTCATCCTC +
Preference number: 5 (lower is better)
Translates to: VVQNLCLHFVFTAVG*LEVLLLLFLLLLIL
Trigger: GAGGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAGAGATTCTGGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CCA 90 bp TATCATGTAATAGGCTATGAAGGGAAGCAAGACCTTGAGCTTGTCTaGGTGGACGCTGATGTTGGCCTTGACAGCATTTCGGGACCAGAT +
Preference number: 5 (lower is better)
Translates to: YHVIGYEGKQDLELV*VDADVGLDSISGPD
Trigger: ATCTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTTCATAGCCTATTACATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
CDS-3UTR CAA 90 bp TTTAATAAGGACAATTCCAGAGGGGCCTGGCTGTGGCCAAAGCTGTGCCAAACGTCGGAAATCGAGGACTaGATAAATCTTGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: FNKDNSRGAWLWPKLCQTSEIED*INLGIW
Trigger: CCAGATGCCAAGATTTATCAAGTCCTCGATTTCCGA...CGTTTGGCACAGCTTTGGCCACAGCCAGGCCCCTCTGGAATTGTCCTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
CDS GCA 72 bp CCAGCCCCAAATCGGCCGCCTCCGCCGCCATCCCTGTaGGTCTGGCAGGGCCCGCCAGGGTCCGTCCCACAA +
Preference number: 6 (lower is better)
Translates to: PAPNRPPPPPSL*VWQGPPGSVPQ
Trigger: TTGTGGGACGGACCCTGGCGGGCCCTGCCAGACGCACAGGGATGGCGGCGGAGGCGGCCGATTTGGGGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS GCA 72 bp CATCACGCACCACTCCCGGGTACTCCACGCACACCATaGGTCGCTCCCGCCTCAGCTCCACGGGGACGGCGG +
Preference number: 6 (lower is better)
Translates to: HHAPLPGTPRTP*VAPASAPRGRR
Trigger: CCGCCGTCCCCGTGGAGCTGAGGCGGGAGCGACGCATGGTGTGCGTGGAGTACCCGGGAGTGGTGCGTGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000485692.1
CDS CCA 72 bp CCAAATCGGCCGCCTCCGCCGCCATCCCTGTGCGTCTaGCAGGGCCCGCCAGGGTCCGTCCCACAAAGTACT +
Preference number: 6 (lower is better)
Translates to: PNRPPPPPSLCV*QGPPGSVPQST
Trigger: AGTACTTTGTGGGACGGACCCTGGCGGGCCCTGCCAGACGCACAGGGATGGCGGCGGAGGCGGCCGATTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS CCA 72 bp GGTCCTTGGGCCGGAAGTACAGCTCCAGCCTCTTGGTaGGGTCTGCGTAGATCCGGGAGACGCCTTCCTCGC +
Preference number: 6 (lower is better)
Translates to: GPWAGSTAPASW*GLRRSGRRLPR
Trigger: GCGAGGAAGGCGTCTCCCGGATCTACGCAGACCCCACCAAGAGGCTGGAGCTGTACTTCCGGCCCAAGGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS CCA 72 bp GCAAGACGCGAGGGCCTCCAGGGAGCAAATGGCCCATaGGAGGGCCCATGTCTTCGGGAAAACGACCGCCGT +
Preference number: 6 (lower is better)
Translates to: ARREGLQGANGP*EGPCLRENDRR
Trigger: ACGGCGGTCGTTTTCCCGAAGACATGGGCCCTCCCATGGGCCATTTGCTCCCTGGAGGCCCTCGCGTCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372099.10
ENST00000440319.5
CDS CCA 72 bp AGGGGCGCCCACCTTGAGCTTGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: RGAHLELVLAGS*FPSTTRPRRAQ
Trigger: CTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGTGGGCGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS GCA 72 bp TTCCGAGCACCACTCGTCCCCGACGGGCCCAGGCCCTaGTTCAGGTCATGCATGGTGACAAGCTGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: FRAPLVPDGPRP*FRSCMVTSWLD
Trigger: ATCCAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGGCCTGGGCCCGTCGGGGACGAGTGGTGCTCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS CCA 72 bp GGGCTCAGCAAGACGCGAGGGCCTCCAGGGAGCAAATaGCCCATGGGAGGGCCCATGTCTTCGGGAAAACGA +
Preference number: 6 (lower is better)
Translates to: GLSKTRGPPGSK*PMGGPMSSGKR
Trigger: TCGTTTTCCCGAAGACATGGGCCCTCCCATGGGCCATTTGCTCCCTGGAGGCCCTCGCGTCTTGCTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372099.10
ENST00000440319.5
CDS CAA 72 bp CTGATGCGGAGCAGCAGGCTGCTGGTACTGAAGCGGTaGGCGCACACTGGGTGGCAGTATGGGTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LMRSSRLLVLKR*AHTGWQYGSLG
Trigger: GCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGCTGCTCCGCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CAA 72 bp TCCTGGCCTCCAGGGGCGCCCACCTTGAGCTTGTACTaGCTGGAAGCTGGTTTCCGAGCACCACTCGTCCCC +
Preference number: 6 (lower is better)
Translates to: SWPPGAPTLSLY*LEAGFRAPLVP
Trigger: GGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGTGGGCGCCCCTGGAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435745.1
CDS CAA 90 bp CGCCAGGGTCCGTCCCACAAAGTACTCCCAAAGGCCTCGCCTCAATaGTTCCGCGAAGGAATCGTTCCGGGCTCCCTCACCGCTCGCGTC +
Preference number: 6 (lower is better)
Translates to: RQGPSHKVLPKASPQ*FREGIVPGSLTARV
Trigger: GACGCGAGCGGTGAGGGAGCCCGGAACGATTCCTTCGCGGAACAATTGAGGCGAGGCCTTTGGGAGTACTTTGTGGGACGGACCCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS CAA 90 bp GCTGCAGCCTCCAGTGGCTGCTTGGGCACCTCCTCATCCTCAAAGTaGACAAAGATGGCATTGTGGGGGCGCCGGGCTCTGCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: AAASSGCLGTSSSSK*TKMALWGRRALLRP
Trigger: TGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 72 bp ATGGGTCCTTGGGCCGGAAGTACAGCTCCAGCCTCTTaGTGGGGTCTGCGTAGATCCGGGAGACGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: MGPWAGSTAPAS*WGLRRSGRRLP
Trigger: AGGAAGGCGTCTCCCGGATCTACGCAGACCCCACCAAGAGGCTGGAGCTGTACTTCCGGCCCAAGGACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
CDS CCA 72 bp AGGCTGCTGGTACTGAAGCGGTTGGCGCACACTGGGTaGCAGTATGGGTCCTTGGGCCGGAAGTACAGCTCC +
Preference number: 6 (lower is better)
Translates to: RLLVLKRLAHTG*QYGSLGRKYSS
Trigger: GGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 72 bp CAGCAGGCTGCTGGTACTGAAGCGGTTGGCGCACACTaGGTGGCAGTATGGGTCCTTGGGCCGGAAGTACAG +
Preference number: 6 (lower is better)
Translates to: QQAAGTEAVGAH*VAVWVLGPEVQ
Trigger: CTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 72 bp AGACACCAGTCTGGCCGGGTCAGGGAGGCCCAGCCTTaGGCCCTGTCACACGTAGTCCAGAATCTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: RHQSGRVREAQP*ALSHVVQNLCL
Trigger: GAGACAGAGATTCTGGACTACGTGTGACAGGGCCCAAGGCTGGGCCTCCCTGACCCGGCCAGACTGGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CAA 90 bp GTTCTCTTCCTGATGCGGAGCAGCAGGCTGCTGGTACTGAAGCGGTaGGCGCACACTGGGTGGCAGTATGGGTCCTTGGGCCGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: VLFLMRSSRLLVLKR*AHTGWQYGSLGRKY
Trigger: GTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACCAGCAGCCTGCTGCTCCGCATCAGGAAGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CAA 90 bp TGCCGGATCATGAGGGACATGGTGTCCCTGAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCCCGTTCTGTGCAGGAATTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: CRIMRDMVSLSSSLV*GRHHPSRSVQEFSA
Trigger: GGCAGAGAATTCCTGCACAGAACGGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCTCAGGGACACCATGTCCCTCATGATCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS TCA 72 bp CCAGTGGCTGCTTGGGCACCTCCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGGGGCGCCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: PVAAWAPPHPQS*QRWHCGGAGLC
Trigger: GCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 72 bp GGTACTGAAGCGGTTGGCGCACACTGGGTGGCAGTATaGGTCCTTGGGCCGGAAGTACAGCTCCAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: GTEAVGAHWVAV*VLGPEVQLQPL
Trigger: AAGAGGCTGGAGCTGTACTTCCGGCCCAAGGACCCATACTGCCACCCAGTGTGCGCCAACCGCTTCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CCA 72 bp CTGAAGGCTGACCTTGAGCTTGTACTTGCTGGAAGCTaGTTTCCGAGCACCACTCGTCCCCGACGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LKADLELVLAGS*FPSTTRPRRAQ
Trigger: CTGGGCCCGTCGGGGACGAGTGGTGCTCGGAAACCAGCTTCCAGCAAGTACAAGCTCAAGGTCAGCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342018.12
ENST00000372108.9
ENST00000461871.1
CDS CCA 72 bp GCAGACTCTCCTCCACGTCTGGGCTGCAGCCTCCAGTaGCTGCTTGGGCACCTCCTCATCCTCAAAGTTGAC +
Preference number: 6 (lower is better)
Translates to: ADSPPRLGCSLQ*LLGHLLILKVD
Trigger: GTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 72 bp TGCTTGCCGCCTGCTTCCGTATGCACAGCCAAGTACTaGAAGTCAGACATCCCCGGGAGACGCCTTCCTCGC +
Preference number: 6 (lower is better)
Translates to: CLPPASVCTAKY*KSDIPGRRLPR
Trigger: GCGAGGAAGGCGTCTCCCGGGGATGTCTGACTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439697.1
ENST00000485692.1
CDS CAA 72 bp ATGAGGGACATGGTGTCCCTGAGCTCGTCGCTGGTCTaGGGGAGGCACCACCCATCCCGTTCTGTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: MRDMVSLSSSLV*GRHHPSRSVQE
Trigger: TTCCTGCACAGAACGGGATGGGTGGTGCCTCCCCAAGACCAGCGACGAGCTCAGGGACACCATGTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 72 bp GGTGATGGGGAGGCTGTAGTTGTAGGTGCTGCGCTTTaGTTTGACCGGCAAGTCACTGGGGGCGTAACCGTG +
Preference number: 6 (lower is better)
Translates to: GDGEAVVVGAAL*FDRQVTGGVTV
Trigger: CACGGTTACGCCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTACAACTACAGCCTCCCCATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS GCA 72 bp CTGGAAAAGAGAGCAGGCCTCTTGGAGCGGATGGTCTaGCGGATCATGAGGGACATGGTGTCCCTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: LEKRAGLLERMV*RIMRDMVSLSS
Trigger: CGAGCTCAGGGACACCATGTCCCTCATGATCCGGCAGACCATCCGCTCCAAGAGGCCTGCTCTCTTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 72 bp AGGTGTGCACCACCACGCCCAGTGTGTGAGCCTCCGTaGCCGGACCATCCCATTTTCAGGATAGAGAACCGA +
Preference number: 6 (lower is better)
Translates to: RCAPPRPVCEPP*PDHPIFRIENR
Trigger: TCGGTTCTCTATCCTGAAAATGGGATGGTCCGGGCACGGAGGCTCACACACTGGGCGTGGTGGTGCACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485692.1
CDS CCA 72 bp ATGCCAAGGATCTCCATGTCAAATGTGACCTCGGAGTaGGCCTCAGTGCCCAGCACCCCTTTCTGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: MPRISMSNVTSE*ASVPSTPFCRL
Trigger: GAGGCGGCAGAAAGGGGTGCTGGGCACTGAGGCCCACTCCGAGGTCACATTTGACATGGAGATCCTTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000440319.5
CDS CAA 72 bp CCGTCCCACAAAGTACTCCCAAAGGCCTCGCCTCAATaGTTCCGCGAAGGAATCGTTCCGGGCTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: PSHKVLPKASPQ*FREGIVPGSLT
Trigger: GGTGAGGGAGCCCGGAACGATTCCTTCGCGGAACAATTGAGGCGAGGCCTTTGGGAGTACTTTGTGGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372099.10
CDS CAA 90 bp GGCTGCTTGGGCACCTCCTCATCCTCAAAGTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTGCTCAGGCCAATCAGATTCTCACCT +
Preference number: 6 (lower is better)
Translates to: GCLGTSSSSKLTKMA*WGRRALLRPIRFSP
Trigger: AGGTGAGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS TCA 72 bp TCCATAGGTGCTTGGGCACCTCCTCATCCTCAAAGTTaGCAAAGATGGCATTGTGGGGGCGCCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SIGAWAPPHPQS*QRWHCGGAGLC
Trigger: GCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCACCTATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS TCA 72 bp GTCCCACAGTCACGTTCTTTGCACTGTCCTCAGGACTaGGGCCAACCTGGCGATCACACAGGCCACCGCTTA +
Preference number: 6 (lower is better)
Translates to: VPQSRSLHCPQD*GQPGDHTGHRL
Trigger: TAAGCGGTGGCCTGTGTGATCGCCAGGTTGGCCTCAGTCCTGAGGACAGTGCAAAGAACGTGACTGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485692.1
CDS GCA 72 bp ACTCTCCTCCACGTCTGGGCTGCAGCCTCCAGTGGCTaGTTGGGCACCTCCTCATCCTCAAAGTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: TLLHVWAAASSG*LGTSSSSKLTK
Trigger: CTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 72 bp ACGTTCTTTGCACTGTCCTCAGGACTGAGGCCAACCTaGCGATCACACAGGCCACCGCTTACTAAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: TFFALSSGLRPT*RSHRPPLTKAL
Trigger: CAGGGCCTTAGTAAGCGGTGGCCTGTGTGATCGCCAGGTTGGCCTCAGTCCTGAGGACAGTGCAAAGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485692.1
CDS CAA 72 bp GGCACCTCCTCATCCTCAAAGTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTGCTCAGGCCAATCAGA +
Preference number: 6 (lower is better)
Translates to: GTSSSSKLTKMA*WGRRALLRPIR
Trigger: TCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CAA 90 bp AGGTGCTTGGGCACCTCCTCATCCTCAAAGTTGACAAAGATGGCATaGTGGGGGCGCCGGGCTCTGCTCAGGCCAATCAGATTCTCACCT +
Preference number: 6 (lower is better)
Translates to: RCLGTSSSSKLTKMA*WGRRALLRPIRFSP
Trigger: AGGTGAGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS CAA 90 bp CCAAATCGAATCCATAGGTGCTTGGGCACCTCCTCATCCTCAAAGTaGACAAAGATGGCATTGTGGGGGCGCCGGGCTCTGCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: PNRIHRCLGTSSSSK*TKMALWGRRALLRP
Trigger: TGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGTGCCCAAGCACCTATGGATTCGATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342018.12
CDS TCA 72 bp CTTCTCGGGCCGGAGCATGAGCACCTTGTCATACATTaGCGTATGCTTGCCGCCTGCTTCCGTATGCACAGC +
Preference number: 6 (lower is better)
Translates to: LLGPEHEHLVIH*RMLAACFRMHS
Trigger: GCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS TCA 72 bp CCTGGTGGAAAAAGGCCTCCTTCTCGGGCCGGAGCATaGGCACCTTGTCATACATTGACGTATGCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: PGGKRPPSRAGA*APCHTLTYACR
Trigger: GCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS TCA 72 bp TGGGGAGGCTGTAGTTGTAGGTGCTGCGCTTTGCTTTaGCCGGCAAGTCACTGGGGGCGTAACCGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: WGGCSCRCCALL*PASHWGRNRVS
Trigger: TGAAACACGGTTACGCCCCCAGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTACAACTACAGCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000435745.1
ENST00000461871.1
CDS TCA 72 bp GTACGTCAGCTGCTCTTTTCCGCCATCAGCCTTGGCTaGGCTGGAAAAGAGAGCAGGCCTCTTGGAGCGGAT +
Preference number: 6 (lower is better)
Translates to: VRQLLFSAISLG*AGKESRPLGAD
Trigger: ATCCGCTCCAAGAGGCCTGCTCTCTTTTCCAGCTCAGCCAAGGCTGATGGCGGAAAAGAGCAGCTGACGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 72 bp TCATCCTCCTCGTCTTCCCCAGACTCGTACGTCAGCTaGTCTTTTCCGCCATCAGCCTTGGCTGAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSSSSPDSYVS*SFPPSALAELE
Trigger: TTCCAGCTCAGCCAAGGCTGATGGCGGAAAAGAGCAGCTGACGTACGAGTCTGGGGAAGACGAGGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CAA 72 bp AGCAAGACCTTGAGCTTGTCTGGGTGGACGCTGATGTaGGCCTTGACAGCATTTCGGGACCAGATGGGACGG +
Preference number: 6 (lower is better)
Translates to: SKTLSLSGWTLM*ALTAFRDQMGR
Trigger: CCGTCCCATCTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CAA 90 bp TCCTGGTGGAAAAAGGCCTCCTTCTCGGGCCGGAGCATGAGCACCTaGTCATACATTGACGTATGCTTGCCGCCTGCTTCCGTATGCACA +
Preference number: 6 (lower is better)
Translates to: SWWKKASFSGRSMST*SYIDVCLPPASVCT
Trigger: TGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS GCA 72 bp GGCCGGAGCATGAGCACCTTGTCATACATTGACGTATaGTTGCCGCCTGCTTCCGTATGCACAGCCAAGTAC +
Preference number: 6 (lower is better)
Translates to: GRSMSTLSYIDV*LPPASVCTAKY
Trigger: GTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS GCA 72 bp GAGGCACCACCCATCCCGTTCTGTGCAGGAATTCTCTaGCCCGTCATTGCGGTGAATGATCTTCTGCAACTC +
Preference number: 6 (lower is better)
Translates to: EAPPIPFCAGIL*PVIAVNDLLQL
Trigger: GAGTTGCAGAAGATCATTCACCGCAATGACGGGGCAGAGAATTCCTGCACAGAACGGGATGGGTGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CCA 72 bp ACCTCCTCATCCTCAAAGTTGACAAAGATGGCATTGTaGGGGCGCCGGGCTCTGCTCAGGCCAATCAGATTC +
Preference number: 6 (lower is better)
Translates to: TSSSSKLTKMAL*GRRALLRPIRF
Trigger: GAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTTGAGGATGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CAA 72 bp AAAAAGGCCTCCTTCTCGGGCCGGAGCATGAGCACCTaGTCATACATTGACGTATGCTTGCCGCCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: KKASFSGRSMST*SYIDVCLPPAS
Trigger: GGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS CAA 72 bp ACCTTGAGCTTGTCTGGGTGGACGCTGATGTTGGCCTaGACAGCATTTCGGGACCAGATGGGACGGATGTCA +
Preference number: 6 (lower is better)
Translates to: TLSLSGWTLMLA*TAFRDQMGRMS
Trigger: TGACATCCGTCCCATCTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CAA 90 bp TTCTCGGGCCGGAGCATGAGCACCTTGTCATACATTGACGTATGCTaGCCGCCTGCTTCCGTATGCACAGCCAAGTACTGGAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: FSGRSMSTLSYIDVC*PPASVCTAKYWKSD
Trigger: GTCTGACTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCGGCCCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS CAA 90 bp TCCAGAATCTCTGTCTCCATTTCGTTTTCACTGCCGTCGGATGGCTaGAAGTCCTCCTCCTCCTCTTCCTCCTCCTCCTCATCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SRISVSISFSLPSDG*KSSSSSSSSSSSSS
Trigger: CGAGGAGGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAGAGATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CAA 90 bp GGAAGCAAGACCTTGAGCTTGTCTGGGTGGACGCTGATGTTGGCCTaGACAGCATTTCGGGACCAGATGGGACGGATGTCAAACAGCTTC +
Preference number: 6 (lower is better)
Translates to: GSKTLSLSGWTLMLA*TAFRDQMGRMSNSF
Trigger: GAAGCTGTTTGACATCCGTCCCATCTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS TCA 72 bp CTGTCTCCATTTCGTTTTCACTGCCGTCGGATGGCTTaGAGTCCTCCTCCTCCTCTTCCTCCTCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LSPFRFHCRRMA*SPPPPLPPPPH
Trigger: ATGAGGAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS GCA 72 bp TCATACATTGACGTATGCTTGCCGCCTGCTTCCGTATaGACAGCCAAGTACTGGAAGTCAGACATCCCCGGG +
Preference number: 6 (lower is better)
Translates to: SYIDVCLPPASV*TAKYWKSDIPG
Trigger: CCCGGGGATGTCTGACTTCCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439697.1
ENST00000485692.1
CDS CCA 72 bp GCTATGAAGGGAAGCAAGACCTTGAGCTTGTCTGGGTaGACGCTGATGTTGGCCTTGACAGCATTTCGGGAC +
Preference number: 6 (lower is better)
Translates to: AMKGSKTLSLSG*TLMLALTAFRD
Trigger: GTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTTCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CAA 72 bp CGGAGCATGAGCACCTTGTCATACATTGACGTATGCTaGCCGCCTGCTTCCGTATGCACAGCCAAGTACTGG +
Preference number: 6 (lower is better)
Translates to: RSMSTLSYIDVC*PPASVCTAKYW
Trigger: CCAGTACTTGGCTGTGCATACGGAAGCAGGCGGCAAGCATACGTCAATGTATGACAAGGTGCTCATGCTCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
ENST00000485692.1
CDS CAA 72 bp TCTGTCTCCATTTCGTTTTCACTGCCGTCGGATGGCTaGAAGTCCTCCTCCTCCTCTTCCTCCTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SVSISFSLPSDG*KSSSSSSSSSS
Trigger: TGAGGAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CAA 90 bp ATGAAGGGAAGCAAGACCTTGAGCTTGTCTGGGTGGACGCTGATGTaGGCCTTGACAGCATTTCGGGACCAGATGGGACGGATGTCAAAC +
Preference number: 6 (lower is better)
Translates to: MKGSKTLSLSGWTLM*ALTAFRDQMGRMSN
Trigger: GTTTGACATCCGTCCCATCTGGTCCCGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS CCA 72 bp AATCTCTGTCTCCATTTCGTTTTCACTGCCGTCGGATaGCTTGAAGTCCTCCTCCTCCTCTTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: NLCLHFVFTAVG*LEVLLLLFLLL
Trigger: GAGGAGGAGGAAGAGGAGGAGGAGGACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGACAGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS CCA 72 bp ATAGGCTATGAAGGGAAGCAAGACCTTGAGCTTGTCTaGGTGGACGCTGATGTTGGCCTTGACAGCATTTCG +
Preference number: 6 (lower is better)
Translates to: IGYEGKQDLELV*VDADVGLDSIS
Trigger: CGAAATGCTGTCAAGGCCAACATCAGCGTCCACCCAGACAAGCTCAAGGTCTTGCTTCCCTTCATAGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000439697.1
ENST00000440319.5
CDS TCA 72 bp CGTTCTGTGCAGGAATTCTCTGCCCCGTCATTGCGGTaGATGATCTTCTGCAACTCTTCCACATTCAAGTCG +
Preference number: 6 (lower is better)
Translates to: RSVQEFSAPSLR*MIFCNSSTFKS
Trigger: CGACTTGAATGTGGAAGAGTTGCAGAAGATCATTCACCGCAATGACGGGGCAGAGAATTCCTGCACAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1
CDS TCA 72 bp CTGTGCAGGAATTCTCTGCCCCGTCATTGCGGTGAATaGTCTTCTGCAACTCTTCCACATTCAAGTCGCATA +
Preference number: 6 (lower is better)
Translates to: LCRNSLPRHCGE*SSATLPHSSRI
Trigger: TATGCGACTTGAATGTGGAAGAGTTGCAGAAGATCATTCACCGCAATGACGGGGCAGAGAATTCCTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342018.12
ENST00000372097.10
ENST00000372099.10
ENST00000372108.9
ENST00000489842.1