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Pregenerated sensors for GTF3C4 (Homo sapiens)

Ensembl gene IDs: ENSG00000125484

Ensembl transcript IDs: ENST00000372146.5, ENST00000483873.6

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCCTTCCAACTGGGTGTGTGGAAACCTGGGGGAGGCAGGTGGTaGCTAGATTTTAGGGTCTTAACAATGCCATTGGGTCCAGTCCCT +
Preference number: 1 (lower is better)
Translates to: KAFQLGVWKPGGGRW*LDFRVLTMPLGPVP
Trigger: AGGGACTGGACCCAATGGCATTGTTAAGACCCTAAAATCTAGCCACCACCTGCCTCCCCCAGGTTTCCACACACCCAGTTGGAAGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp GTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATCCCGTaGGTCCTCACTGAGCCAAACACATCTGAGAGTTTAATCAACTGG +
Preference number: 1 (lower is better)
Translates to: VMMARYAPQGLTAIP*VLTEPNTSESLINW
Trigger: CCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR GCA 90 bp GAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTaGACTGAGCAACACACTCCCATGAGGTATGCTGACCCTCAGAGA +
Preference number: 1 (lower is better)
Translates to: EAPEKRLVPFPLFQG*TEQHTPMRYADPQR
Trigger: TCTCTGAGGGTCAGCATACCTCATGGGAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp ACTCGTGAGGGTCCGGCTTCCTCCAGTGCATCCTTCTCTTCAGGCTaGAGGAAGTTTTCTATGGCAGAGTTCATCATGCCCTTCCATCTT +
Preference number: 1 (lower is better)
Translates to: TREGPASSSASFSSG*RKFSMAEFIMPFHL
Trigger: AAGATGGAAGGGCATGATGAACTCTGCCATAGAAAACTTCCTCCAGCCTGAAGAGAAGGATGCACTGGAGGAAGCCGGACCCTCACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 90 bp AGGCAAGAGAGAGAGGTCAGGAGCAGAAACGATGGAAAGATCCTGTaGCAATCAACCAGTGACCCTAATTCCTGTTTCCATTCCAGGAAT +
Preference number: 1 (lower is better)
Translates to: RQEREVRSRNDGKIL*QSTSDPNSCFHSRN
Trigger: ATTCCTGGAATGGAAACAGGAATTAGGGTCACTGGTTGATTGGCACAGGATCTTTCCATCGTTTCTGCTCCTGACCTCTCTCTCTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 90 bp TCCAGCCATTTCAAAGGACATCCTTTAGTCTCTGGAAATGGAGAGTaGGATTCAGAAATGAGCTCCAGGGGCCCTCTTTACAATCACCAA +
Preference number: 1 (lower is better)
Translates to: SSHFKGHPLVSGNGE*DSEMSSRGPLYNHQ
Trigger: TTGGTGATTGTAAAGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAAGGATGTCCTTTGAAATGGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 90 bp GCCCATGTGTTGCTTTACACTTTTAATCTCTGTTGGTACATCAGATaGCACGGACCAAGCAATTTAAGTTCTGGAGCCCGAAGGCAGTTC +
Preference number: 1 (lower is better)
Translates to: AHVLLYTFNLCWYIR*HGPSNLSSGARRQF
Trigger: GAACTGCCTTCGGGCTCCAGAACTTAAATTGCTTGGTCCGTGGCATCTGATGTACCAACAGAGATTAAAAGTGTAAAGCAACACATGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp ATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCTaGTGCCATTCCCACTTTTCCAAGGTTGCACTGAGCAACACACTC +
Preference number: 1 (lower is better)
Translates to: IEDVSLNCKRHLKNV*CHSHFSKVALSNTL
Trigger: GAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp ACCATGTTAAACCATCTATGCAGATGGCAGGCTACATCCTATCAATaGGACATGGACTGGCTAACAAGTCCTGACGATGATTTGTATCTG +
Preference number: 1 (lower is better)
Translates to: TMLNHLCRWQATSYQ*DMDWLTSPDDDLYL
Trigger: CAGATACAAATCATCGTCAGGACTTGTTAGCCAGTCCATGTCTCATTGATAGGATGTAGCCTGCCATCTGCATAGATGGTTTAACATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 90 bp CTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTGCTTTACATaGAGCGCGGCAATAGCACTTCCACTATTTCTCCAGTTCCTGAAA +
Preference number: 1 (lower is better)
Translates to: LKGSNCIESLLLCFT*SAAIALPLFLQFLK
Trigger: TTTCAGGAACTGGAGAAATAGTGGAAGTGCTATTGCCGCGCTGCATGTAAAGCACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 90 bp TGCCAATCAACCAGTGACCCTAATTCCTGTTTCCATTCCAGGAATTaGAGCAATTCACAAACTCTGAGGCAGTTTAACTGTTGCAGAGAA +
Preference number: 1 (lower is better)
Translates to: CQSTSDPNSCFHSRN*SNSQTLRQFNCCRE
Trigger: TTCTCTGCAACAGTTAAACTGCCTCAGAGTTTGTGAATTGCTGCAATTCCTGGAATGGAAACAGGAATTAGGGTCACTGGTTGATTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp AACAAAACATCAGCCCATGTGTTGCTTTACACTTTTAATCTCTGTTaGTACATCAGATGCCACGGACCAAGCAATTTAAGTTCTGGAGCC +
Preference number: 1 (lower is better)
Translates to: NKTSAHVLLYTFNLC*YIRCHGPSNLSSGA
Trigger: GGCTCCAGAACTTAAATTGCTTGGTCCGTGGCATCTGATGTACCAACAGAGATTAAAAGTGTAAAGCAACACATGGGCTGATGTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp TTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTaGACACACAGGGATTTCAGAATGAGTACCAAGCATAACAAGCTA +
Preference number: 1 (lower is better)
Translates to: LADIIVGRDCLKSAW*THRDFRMSTKHNKL
Trigger: TAGCTTGTTATGCTTGGTACTCATTCTGAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTaGTGGACACACAGGGATTTCAGAATGAGTACCAAGCATAACAAG +
Preference number: 1 (lower is better)
Translates to: VLADIIVGRDCLKSA*WTHRDFRMSTKHNK
Trigger: CTTGTTATGCTTGGTACTCATTCTGAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp CTCACTTCTGAGCTGTCCCTCTCTAGAAGTCTCCAGACAGACCCCTaGATACTAAATGAAACATCTGGAAATGTCAACATTAAAAATACT +
Preference number: 1 (lower is better)
Translates to: LTSELSLSRSLQTDP*ILNETSGNVNIKNT
Trigger: AGTATTTTTAATGTTGACATTTCCAGATGTTTCATTTAGTATCCAGGGGTCTGTCTGGAGACTTCTAGAGAGGGACAGCTCAGAAGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 90 bp AATGAGAAAGAGCTAAAACCAATGGTAGTTCATCAATTGGAGAAATaGCCAACCAGCGACTTGGTAAAGAAACAGAGGTTCTGTTACCCT +
Preference number: 1 (lower is better)
Translates to: NEKELKPMVVHQLEK*PTSDLVKKQRFCYP
Trigger: AGGGTAACAGAACCTCTGTTTCTTTACCAAGTCGCTGGTTGGCCATTTCTCCAATTGATGAACTACCATTGGTTTTAGCTCTTTCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp CTCCAGTTCCTGAAACAGTTATTACGGTCACAGCTGAAAGCAACTTaGAATCTACCAAATAAGATCAGGCAAATTTTAGGACGGTATAGA +
Preference number: 1 (lower is better)
Translates to: LQFLKQLLRSQLKAT*NLPNKIRQILGRYR
Trigger: TCTATACCGTCCTAAAATTTGCCTGATCTTATTTGGTAGATTTCAAGTTGCTTTCAGCTGTGACCGTAATAACTGTTTCAGGAACTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp GACGATGATTTGTATCTGTGCCATGGAAATGAGTTTACAATCTTCTaGAAAACCCCACTTCTTCATCGGGATAGTGATTCTGTACTACTT +
Preference number: 1 (lower is better)
Translates to: DDDLYLCHGNEFTIF*KTPLLHRDSDSVLL
Trigger: AAGTAGTACAGAATCACTATCCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACAGATACAAATCATCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp TTCCTAGGAACCTCAGCTCTAATATTAGATAAAAACGCAGGACACTaGTATGTAATCTTCAGGAAAAGAAGGTTAAGTAGTGCTAAGGAT +
Preference number: 1 (lower is better)
Translates to: FLGTSALILDKNAGH*YVIFRKRRLSSAKD
Trigger: ATCCTTAGCACTACTTAACCTTCTTTTCCTGAAGATTACATATCAGTGTCCTGCGTTTTTATCTAATATTAGAGCTGAGGTTCCTAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 90 bp CAACCCATTTACAGTATTTCACTTAGCCTATACCTTATTTTAGCATaGGAGTATAATCTTACACTTTCGTCAACTCTTCTCAAACCCAGA +
Preference number: 1 (lower is better)
Translates to: QPIYSISLSLYLILA*EYNLTLSSTLLKPR
Trigger: TCTGGGTTTGAGAAGAGTTGACGAAAGTGTAAGATTATACTCTCATGCTAAAATAAGGTATAGGCTAAGTGAAATACTGTAAATGGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGTCAATGCAACATCTGTaGAAATGGGAATCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: GWRPLIMPSVVMMARYAPSMQHL*KWESAA
Trigger: GGCAGCTGATTCCCATTTTCACAGATGTTGCATTGA...CGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR-3UTR CCA 90 bp GATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATCCCGTGAGTCCTCACTCACCTTTCCGTCACTaGAGCAAGTATAGACTGTTC +
Preference number: 2 (lower is better)
Translates to: DDGQVCTAGAHCYPVSPHSPFRH*SKYRLF
Trigger: GAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGA...GTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTGGTGCCACCTCGGCTaGCTGCAGCTTCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPWCHLG*LQLLPP
Trigger: AGGAGGCAGAAGCTGCAGTCAGCCGAGGTGGCACCA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACCTGCCTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTPASAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGGCAGG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGCCTCCTGGGTTGAAGTaGTGCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLPPGLK*CSCLSL
Trigger: GAGGCTGAGGCAGGAGCATCACTTCAACCCAGGAGG...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTTGCCCAGGCTGAAGTaGAGTGGTGCCACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGLPRLK*SGATSA
Trigger: AGCCGAGGTGGCACCACTGCACTTCAGCCTGGGCAA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTGGGCTGTGGCGTGGGTaGACTACAGTATTTGACATC +
Preference number: 2 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVGLWRG*TTVFDI
Trigger: GATGTCAAATACTGTAGTTCACCCACGCCACAGCCC...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAAAGCCCAGCCCCATCTaGGACATCTTAACAGACCAC +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTKPSPI*DILTDH
Trigger: GTGGTCTGTTAAGATGTCTCAGATGGGGCTGGGCTT...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGCCACCTCGGCTGACTaGAGCTTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILATSAD*SFCLLG
Trigger: ACCCAGGAGGCAGAAGCTGCAGTCAGCCGAGGTGGC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACTGGTCTCGAACTCCTaGCCTCAAGTGACCCGTCTG +
Preference number: 2 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTLVSNS*PQVTRL
Trigger: CAGACGGGTCACTTGAGGCCAGGAGTTCGAGACCAG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTGCAGCTTCTGCCTCCTaGGTTGAAGTGATGCTCCTG +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPAASAS*VEVMLL
Trigger: CAGGAGCATCACTTCAACCCAGGAGGCAGAAGCTGC...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAAACCAAGAGGGTGTCTaGGGGAAGGAAAGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTNQEGV*GKERQE
Trigger: CTCTTGCCTTTCCTTCCCCCAGACACCCTCTTGGTT...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACTCCAAGGGCTGGTCTaGACTACCTATCAATGCGGG +
Preference number: 2 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTLQGLV*TTYQCG
Trigger: CCCGCATTGATAGGTAGTGCAGACCAGCCCTTGGAG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 90 bp CAGGAGCTGAGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATaGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCAT +
Preference number: 2 (lower is better)
Translates to: QELSSCLFKGFESNK*DLVVFVNRVEAVDH
Trigger: ATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAAGTGCGATTCAGAAATaGGCTCCAGGGGCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTSAIQK*APGALF
Trigger: AAAGAGGGCCCCTGGAGCTCATTTCTGAATCGCACT...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTACGACTCCAACTCTCTaGGTCCAGCCATTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPTTPTL*VQPFQR
Trigger: CCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGT...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGAACTCCTGACCTTGTaGTCTGCCTGCCTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLELLTL*SACLCF
Trigger: GAAGCAAAGGCAGGCAGATCACAAGGTCAGGAGTTC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGAGCCTCCTGAGTAACTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGSLLSN*DYRHAP
Trigger: TGGCGCATGCCTGTAATCTCAGTTACTCAGGAGGCT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTCCCATGAGGTATGCTaGCCCTCAGAGAAATTCAGA +
Preference number: 2 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVSHEVC*PSEKFR
Trigger: TCTGAATTTCTCTGAGGGTCAGCATACCTCATGGGA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGAGCAACACACTCCCATaGGGTATGCTGACCCTCAGA +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLSNTLP*GMLTLR
Trigger: TCTGAGGGTCAGCATACCTCATGGGAGTGTGTTGCT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTCCTGACCTTGTGATCTaGCTGCCTTTGCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPPDLVI*LPLLPK
Trigger: TTTGGGAAGCAAAGGCAGGCAGATCACAAGGTCAGG...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGGAGTCTCGCCATATTaGCCAGGCTGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRGVSPY*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAATATGGCGAGACTCC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 90 bp CAGTTAAGTCTGAAGCAGGGCTGTGGCGTGGGTGAACTACAGTATTaGACATCTTTATACGGATTAAGGAGTTGGGTCAGGAAACCTGAT +
Preference number: 2 (lower is better)
Translates to: QLSLKQGCGVGELQY*TSLYGLRSWVRKPD
Trigger: ATCAGGTTTCCTGACCCAACTCCTTAATCCGTATAAAGATGTCAAATACTGTAGTTCACCCACGCCACAGCCCTGCTTCAGACTTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTTTCCAAGGTTGCACTaGGCAACACACTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGFPRLH*ATHSHE
Trigger: CTCATGGGAGTGTGTTGCTCAGTGCAACCTTGGAAA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACAGGCAGAGAAAATGTaGTACCTATGTGGGTATCAG +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTQAEKM*YLCGYQ
Trigger: CTGATACCCACATAGGTATCACATTTTCTCTGCCTG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGAGTGCCTCCAAGGGCTaGTCTGCACTACCTATCAAT +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGSASKG*SALPIN
Trigger: ATTGATAGGTAGTGCAGACCAGCCCTTGGAGGCACT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTGGGGGAGGCAGGTGGTaGCTAGATTTTAGGGTCTTA +
Preference number: 2 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCGGGRW*LDFRVL
Trigger: TAAGACCCTAAAATCTAGCCACCACCTGCCTCCCCC...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTCACCTGAAAAACGTCTaGTGCCATTCCCACTTTTCC +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPHLKNV*CHSHFS
Trigger: GGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTG...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTGCTTGAAGTCTGCCTaGTGGACACACAGGGATTTC +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGCLKSA*WTHRDF
Trigger: GAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAAGCTGCAGACACAAATaGCTTCCACCATACAATGTT +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTSCRHK*LPPYNV
Trigger: AACATTGTATGGTGGAAGTCATTTGTGTCTGCAGCT...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTGCTACATCCTATCAATaGGACATGGACTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPATSYQ*DMDWLT
Trigger: TGTTAGCCAGTCCATGTCTCATTGATAGGATGTAGC...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTTGGCAGAGTTCATCATaGCCTTCCATCTTCCCGTCA +
Preference number: 2 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCWQSSS*PSIFPS
Trigger: TGACGGGAAGATGGAAGGGCATGATGAACTCTGCCA...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTCTGGAAATGGAGAGTaGGATTCAGAAATGAGCTCC +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPSGNGE*DSEMSS
Trigger: GGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATGTTGGTACATCAGATaGCACGGACCAAGCAATTTA +
Preference number: 2 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTCWYIR*HGPSNL
Trigger: TAAATTGCTTGGTCCGTGGCATCTGATGTACCAACA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGTTGGGGGCAGAACCTaGATTCCAAATATCAAGGGA +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLVGGRT*IPNIKG
Trigger: TCCCTTGATATTTGGAATCCAGGTTCTGCCCCCAAC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTAGGGGAAACAGGTGGTaGGAAGGAGCTAAAATTTCA +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPRGNRW*EGAKIS
Trigger: TGAAATTTTAGCTCCTTCCCACCACCTGTTTCCCCT...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 90 bp TTCATTACAGTTAGATCCTTTAGAGGGATTTTTGATGACCCAACCTaGAAGGCAAAGGTTCCATTCTTGAGACACTCCCCAGTCTCACTG +
Preference number: 2 (lower is better)
Translates to: FITVRSFRGIFDDPT*KAKVPFLRHSPVSL
Trigger: CAGTGAGACTGGGGAGTGTCTCAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGATCTAACTGTAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACCAGCAGCTATTTTCTaGGAACAAAACATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTPAAIF*EQNISP
Trigger: TGGGCTGATGTTTTGTTCTCAGAAAATAGCTGCTGG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACAAAGGTTCCATTCTTaGGACACTCCCCAGTCTCAC +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILQRFHS*DTPQSH
Trigger: GTGAGACTGGGGAGTGTCTCAAGAATGGAACCTTTG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGACAAGAATGGAGGGATaGAGACCAGCAGCTATTTTC +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGTRMEG*RPAAIF
Trigger: GAAAATAGCTGCTGGTCTGCATCCCTCCATTCTTGT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTCTGTTCAACTTAATTaGACAAGCTTACAGCACCAG +
Preference number: 2 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVSVQLN*TSLQHQ
Trigger: CTGGTGCTGTAAGCTTGTGCAATTAAGTTGAACAGA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACCACTTTTCCAAGGTTaGACTGAGCAACACACTCCC +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILPLFQG*TEQHTP
Trigger: GGGAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTGG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGAATCTTTGCTCCTGTaGTTTACATGCAGCGCGGCA +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILESLLL*FTCSAA
Trigger: TGCCGCGCTGCATGTAAAGCACAGGAGCAAAGATTC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGTACGGATTAAGGAGTTaGGTCAGGAAACCTGATGAC +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLYGLRS*VRKPDD
Trigger: GTCATCAGGTTTCCTGACCCAACTCCTTAATCCGTA...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGGGAGGTTGCCGTCATaGTATCATCTAAGTACCAAC +
Preference number: 2 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRGRLPS*YHLSTN
Trigger: GTTGGTACTTAGATGATACCATGACGGCAACCTCCC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTAACCATCTATGCAGATaGCAGGCTACATCCTATCAA +
Preference number: 2 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPNHLCR*QATSYQ
Trigger: TTGATAGGATGTAGCCTGCCATCTGCATAGATGGTT...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 90 bp GGAATCCCAAATGAGAAAGAGCTAAAACCAATGGTAGTTCATCAATaGGAGAAATGGCCAACCAGCGACTTGGTAAAGAAACAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: GIPNEKELKPMVVHQ*EKWPTSDLVKKQRF
Trigger: GAACCTCTGTTTCTTTACCAAGTCGCTGGTTGGCCATTTCTCCAATTGATGAACTACCATTGGTTTTAGCTCTTTCTCATTTGGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAATTGCAAGAGGCACCTaGAAAACGTCTGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILIARGT*KTSGAI
Trigger: AATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAAT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTTCCTTCTCTTCAGGCTaGAGGAAGTTTTCTATGGCA +
Preference number: 2 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRSFSSG*RKFSMA
Trigger: TGCCATAGAAAACTTCCTCCAGCCTGAAGAGAAGGA...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACATATTTCTCCAGTTCCTaGAACAGTTATTACGGTCAC +
Preference number: 2 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTYFSSS*NSYYGH
Trigger: GTGACCGTAATAACTGTTTCAGGAACTGGAGAAATA...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGATTCCTGTATTTGTCTaGCTATTTGCCGTCTGTACT +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGIPVFV*LFAVCT
Trigger: AGTACAGACGGCAAATAGGCAGACAAATACAGGAAT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGGAGGAAGTTTTCTATaGCAGAGTTCATCATGCCCT +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILGGSFL*QSSSCP
Trigger: AGGGCATGATGAACTCTGCCATAGAAAACTTCCTCC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGACTTTTAATCTCTGTTaGTACATCAGATGCCACGGA +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLTFNLC*YIRCHG
Trigger: TCCGTGGCATCTGATGTACCAACAGAGATTAAAAGT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGAATGTGATACCTATGTaGGTATCAGACTCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLNVIPM*VSDSPN
Trigger: ATTTGGGGAGTCTGATACCCACATAGGTATCACATT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGTTTCTTCTAGGAAGTaGGACCCCACTGTACAATTT +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILVSSRK*DPTVQF
Trigger: AAATTGTACAGTGGGGTCTCACTTCCTAGAAGAAAC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR TCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTTTTTGGAGTTTGGCTaGATTCCATTAAAGGACAGT +
Preference number: 2 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGFLEFG*IPLKDS
Trigger: ACTGTCCTTTAATGGAATTCAGCCAAACTCCAAAAA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 90 bp CTCAAAACAGTCCATGGTGGGCTAATTGTAAAGACATTCCTGTATTaGTCTGCCTATTTGCCGTCTGTACTTACTTTGAATATAACCCAT +
Preference number: 2 (lower is better)
Translates to: LKTVHGGLIVKTFLY*SAYLPSVLTLNITH
Trigger: ATGGGTTATATTCAAAGTAAGTACAGACGGCAAATAGGCAGACAAATACAGGAATGTCTTTACAATTAGCCCACCATGGACTGTTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGAATTATGGAAACCATaGAGAGACTCAAAACAGTCC +
Preference number: 2 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILELWKP*RDSKQS
Trigger: GGACTGTTTTGAGTCTCTGCATGGTTTCCATAATTC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGAGAGTTTAATCAACTaGTGTTCAAACTTCAATGCA +
Preference number: 2 (lower is better)
Translates to: KGFESNKLDLVVFVNRVEESLIN*CSNFNA
Trigger: TGCATTGAAGTTTGAACACCAGTTGATTAAACTCTC...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR GCA 72 bp GTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATaGACCGCAGGGGCTCACTGCTATCCCGTGAGTCCT +
Preference number: 3 (lower is better)
Translates to: VDHALSGDDGQV*TAGAHCYPVSP
Trigger: AGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR TCA 72 bp GCCAGGTATGCACCGCAGGGGCTCACTGCTATCCCGTaGGTCCTCACTGAGCCAAACACATCTGAGAGTTTA +
Preference number: 3 (lower is better)
Translates to: ARYAPQGLTAIP*VLTEPNTSESL
Trigger: TAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR CCA 72 bp TTTCTGAGCAGACTGTTTAGAAGTGCCTCCAAGGGCTaGTCTGCACTACCTATCAATGCGGGGTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: FLSRLFRSASKG*SALPINAGWGW
Trigger: CCACCCCCACCCCGCATTGATAGGTAGTGCAGACCAGCCCTTGGAGGCACTTCTAAACAGTCTGCTCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTAGGCAGTCTCCAGTCTaGCCCAGGCTGAAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVRQSPV*PRLKCS
Trigger: ACTGCACTTCAGCCTGGGCAAGACTGGAGACTGCCT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 72 bp GAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTaGACTGAGCAACACACTCCCATGAGGTATGCTGAC +
Preference number: 3 (lower is better)
Translates to: EKRLVPFPLFQG*TEQHTPMRYAD
Trigger: GTCAGCATACCTCATGGGAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCGGAGTCTCGCCATATaGCCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCRSLAI*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAATATGGCGAGACTCCG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 72 bp CACTTTTCCAAGGTTGCACTGAGCAACACACTCCCATaGGGTATGCTGACCCTCAGAGAAATTCAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: HFSKVALSNTLP*GMLTLREIQKH
Trigger: GTGCTTCTGAATTTCTCTGAGGGTCAGCATACCTCATGGGAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGGTCTTAACAATGCCATaGGGTCCAGTCCCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGVLTMP*GPVPAV
Trigger: CACTGCAGGGACTGGACCCAATGGCATTGTTAAGAC...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 72 bp AGAGAGGTCAGGAGCAGAAACGATGGAAAGATCCTGTaGCAATCAACCAGTGACCCTAATTCCTGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: REVRSRNDGKIL*QSTSDPNSCFH
Trigger: ATGGAAACAGGAATTAGGGTCACTGGTTGATTGGCACAGGATCTTTCCATCGTTTCTGCTCCTGACCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 72 bp GTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCTaGTGCCATTCCCACTTTTCCAAGGTTGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: VSLNCKRHLKNV*CHSHFSKVALS
Trigger: GCTCAGTGCAACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCAAGTAAGTGTTCCTCATaGGTTACAAAGCTGGGGCTA +
Preference number: 3 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSSKCSS*VTKLGL
Trigger: TAGCCCCAGCTTTGTAACCAATGAGGAACACTTACT...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 72 bp AACCATCTATGCAGATGGCAGGCTACATCCTATCAATaGGACATGGACTGGCTAACAAGTCCTGACGATGAT +
Preference number: 3 (lower is better)
Translates to: NHLCRWQATSYQ*DMDWLTSPDDD
Trigger: ATCATCGTCAGGACTTGTTAGCCAGTCCATGTCTCATTGATAGGATGTAGCCTGCCATCTGCATAGATGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGATTAACGTGTTAAACTaGCTGGTAGGTCCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGINVLN*LVGPAC
Trigger: GCAGGCTGGACCTACCAGCAAGTTTAACACGTTAAT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 72 bp ACCACAGTTAAGTCTGAAGCAGGGCTGTGGCGTGGGTaGACTACAGTATTTGACATCTTTATACGGATTAAG +
Preference number: 3 (lower is better)
Translates to: TTVKSEAGLWRG*TTVFDIFIRIK
Trigger: CTTAATCCGTATAAAGATGTCAAATACTGTAGTTCACCCACGCCACAGCCCTGCTTCAGACTTAACTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 72 bp TCTAATTGTATCGAATCTTTGCTCCTGTGCTTTACATaGAGCGCGGCAATAGCACTTCCACTATTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: SNCIESLLLCFT*SAAIALPLFLQ
Trigger: CTGGAGAAATAGTGGAAGTGCTATTGCCGCGCTGCATGTAAAGCACAGGAGCAAAGATTCGATACAATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 72 bp CTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTaGTTTACATGCAGCGCGGCAATAGCACTTCCACTA +
Preference number: 3 (lower is better)
Translates to: LKGSNCIESLLL*FTCSAAIALPL
Trigger: TAGTGGAAGTGCTATTGCCGCGCTGCATGTAAAGCACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 72 bp GAGCTGTCCCTCTCTAGAAGTCTCCAGACAGACCCCTaGATACTAAATGAAACATCTGGAAATGTCAACATT +
Preference number: 3 (lower is better)
Translates to: ELSLSRSLQTDP*ILNETSGNVNI
Trigger: AATGTTGACATTTCCAGATGTTTCATTTAGTATCCAGGGGTCTGTCTGGAGACTTCTAGAGAGGGACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGCAAAGGTTCCATTCTaGAGACACTCCCCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILAKVPF*RHSPVS
Trigger: TGAGACTGGGGAGTGTCTCAAGAATGGAACCTTTGC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTATGCTCTATACTAGGTaGAACAGCAGATACCATGCT +
Preference number: 3 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPMLYTR*NSRYHA
Trigger: AGCATGGTATCTGCTGTTCAACCTAGTATAGAGCAT...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 72 bp AAAGGACAGTTGCATTTCACATGCTCTATACTAGGTTaGACAGCAGATACCATGCTAGCAGACATGAAGCAG +
Preference number: 3 (lower is better)
Translates to: KGQLHFTCSILG*TADTMLADMKQ
Trigger: CTGCTTCATGTCTGCTAGCATGGTATCTGCTGTTCAACCTAGTATAGAGCATGTGAAATGCAACTGTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR GCA 72 bp TTGGTAGTTTTGGCAGATATAATAGTAGGTAGAGATTaGTTGAAGTCTGCCTGGTGGACACACAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: LVVLADIIVGRD*LKSAWWTHRDF
Trigger: GAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAACTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAATAGAGGATGTAAGTTaGAATTGCAAGAGGCACCTG +
Preference number: 3 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTIEDVS*NCKRHL
Trigger: CAGGTGCCTCTTGCAATTCAAACTTACATCCTCTAT...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 72 bp TCAGCCCATGTGTTGCTTTACACTTTTAATCTCTGTTaGTACATCAGATGCCACGGACCAAGCAATTTAAGT +
Preference number: 3 (lower is better)
Translates to: SAHVLLYTFNLC*YIRCHGPSNLS
Trigger: ACTTAAATTGCTTGGTCCGTGGCATCTGATGTACCAACAGAGATTAAAAGTGTAAAGCAACACATGGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGGACACTGTGTTCAAATaGCTTCTGTCAAGATACTTA +
Preference number: 3 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGDTVFK*LLSRYL
Trigger: TAAGTATCTTGACAGAAGCAATTTGAACACAGTGTC...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAAAGACATTCCTGTATTaGTCTGCCTATTTGCCGTCT +
Preference number: 3 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILKTFLY*SAYLPS
Trigger: AGACGGCAAATAGGCAGACAAATACAGGAATGTCTT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTCCATTAAAGGACAGTaGCATTTCACATGCTCTATA +
Preference number: 3 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGSIKGQ*HFTCSI
Trigger: TATAGAGCATGTGAAATGCAACTGTCCTTTAATGGA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR-3UTR CAA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAAATTGTATCGAATCTTaGCTCCTGTGCTTTACATGC +
Preference number: 3 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILNCIES*LLCFTC
Trigger: GCATGTAAAGCACAGGAGCAAAGATTCGATACAATT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR TCA 72 bp TTGTATCTGTGCCATGGAAATGAGTTTACAATCTTCTaGAAAACCCCACTTCTTCATCGGGATAGTGATTCT +
Preference number: 3 (lower is better)
Translates to: LYLCHGNEFTIF*KTPLLHRDSDS
Trigger: AGAATCACTATCCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACAGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CCA 72 bp CTCACTGAGCCAAACACATCTGAGAGTTTAATCAACTaGTGTTCAAACTTCAATGCAACATCTGTGAAAATG +
Preference number: 3 (lower is better)
Translates to: LTEPNTSESLIN*CSNFNATSVKM
Trigger: CATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR TCA 72 bp ATAACTAGAAGCAACTCAGTATTTTTGGAGTTTGGCTaGATTCCATTAAAGGACAGTTGCATTTCACATGCT +
Preference number: 3 (lower is better)
Translates to: ITRSNSVFLEFG*IPLKDSCISHA
Trigger: AGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCCAAAAATACTGAGTTGCTTCTAGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGCACCATGAGGCGGAATaGAGCGCTGGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EAVDHALSGDDGQVCTAGHHEAE*SAGPRG
Trigger: GCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTG...CCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp CATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATGAAGGACCCCGCCGTTaGCAGGCAACGCGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: HALSGDDGQVCTAGAHCYEGPRR*QATRPY
Trigger: GTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTC...ATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp CATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATGGCCCCACCCGGGCCTaGTCGGCCGTGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: HALSGDDGQVCTAGAHCYGPTRA*SAVFIF
Trigger: GAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCC...ATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp AGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGGGCACCGAGGTGCGGTaGATAACCAGGTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RPLIMPSVVMMARYAPQGGTEVR*ITRSWP
Trigger: GGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCC...CCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp ATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTCGATGCTGCGGGCCGTaGACACAGACACGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: IMPSVVMMARYAPQGLTARCCGP*TQTRGG
Trigger: ACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCG...AGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp GGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGACGAGTCCGTACAGCTaGAGCCGTTCCGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: GWRPLIMPSVVMMARYAPTSPYS*SRSGPG
Trigger: TCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGT...CGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp GATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATCCCGTGAGTCCTCACGGCTCGTCGGTGAGATaGCGCCGGATCTCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DDGQVCTAGAHCYPVSPHGSSVR*RRISLL
Trigger: GAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCC...GTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp ACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCAGCTCCAGCACAGCGATaGTGCGGGCCGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: TGWRPLIMPSVVMMARYAAPAQR*CGPWTQ
Trigger: CTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAGC...TGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp ACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCAACAGCTGTTGAGCGGTaGGGGCACCGAGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: TGWRPLIMPSVVMMARYATAVER*GHRGAV
Trigger: CACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGT...TGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp AGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGACCGCAGGGGCTCACTaGTATCCCGTGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RPLIMPSVVMMARYAPQGTAGAH*YPVSPH
Trigger: GTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGT...CCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp GAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGTCATCTTCTCTCAGGTaGAGAGGTCGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAVDHALSGDDGQVCTAGSSSLR*RGRTPW
Trigger: CCAGGGCGTCCGACCTCTGCACCTGAGAGAAGATGA...CCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp TTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGACGCAGAGAGGGGCTaGCACCAGGCGGGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LDLVVFVNRVEAVDHALSDAERG*HQAGAR
Trigger: GCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTC...ACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp ACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCAGGAGACAATTGGCAGTaGGTGAAGGCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGWRPLIMPSVVMMARYAGDNWQ*VKAVGS
Trigger: GGACCCCACGGCCTTCACTCACTGCCAATTGTCTCC...TGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp TTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTAGAGGTCGGACGCCCTaGCGCTCCACGCAGTCGCGC +
Preference number: 4 (lower is better)
Translates to: LDLVVFVNRVEAVDHALSRGRTP*RSTQSR
Trigger: GCGCGACTGCGTGGAGCGCCAGGGCGTCCGACCTCT...ACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTCCCGCCGAGTCACCATaGGGCGGAATGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSPAESP*GGMQRW
Trigger: CCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGG...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTCCCGCCGAGTCACCATaGGGCGGAATGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LDLVVFVNRVEAVDHALSPAESP*GGMQRW
Trigger: CCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGG...ACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp ATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTCTCACTGCTATCCCGTaGGTCCTCACTGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: IMPSVVMMARYAPQGLTALTAIP*VLTEPN
Trigger: GTTTGGCTCAGTGAGGACTCACGGGATAGCAGTGAG...AGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp CAGGAGCTGAGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATTGGACCTGGGGGAGGCTCGTCGGTaGGATGGCGCCGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: QELSSCLFKGFESNKLDLGEARR*DGAGSR
Trigger: GCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCC...CAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGACACCATGAGGCGGAATaGAGCGCTGGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGHHEAE*SAGPRG
Trigger: GCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTG...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAGGCCCCACCCGGGCCTaGTCGGCCGTGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTGPTRA*SAVFIF
Trigger: GAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCC...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTTGTGCACGTCGCAGATaGGCTCCAGCACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSCARRR*APAQRC
Trigger: GCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACA...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATGCAACATCTGTGAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGCCAGCACAGCGATGCTaGGGGCCGTGGACACAGACA +
Preference number: 4 (lower is better)
Translates to: NATSVKMGISCLTFPSLEPAQRC*GPWTQT
Trigger: TGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGG...CTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp GGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCGGCGAATTTCTCCTTaGACTCAGCAACTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GWRPLIMPSVVMMARYAPRRISP*TQQLLF
Trigger: AAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCG...CGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp CATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATAAAATGGGAATCAGCTaGCTCACCTTTCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: HALSGDDGQVCTAGAHCYKMGIS*LTFPSL
Trigger: CAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTT...ATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp TTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTTGGATAACCAGGTCCTaGCCCGGGTTGTGCACGTCG +
Preference number: 4 (lower is better)
Translates to: LDLVVFVNRVEAVDHALSWITRS*PGLCTS
Trigger: CGACGTGCACAACCCGGGCCAGGACCTGGTTATCCA...ACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAGGCACCGAGGTGCGGTaGATAACCAGGTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTGTEVR*ITRSWP
Trigger: GGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCC...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGGTGGAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGGTTTGTCTGCAGTCATaGAGACAATTGGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GWRPLIMPSVVMMARYAPVCLQS*RQLAVS
Trigger: ACTCACTGCCAATTGTCTCCATGACTGCAGACAAAC...CGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTGGTGCCACCTCGGCTaGCTGCAGCTTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVWCHLG*LQLLPP
Trigger: AGGAGGCAGAAGCTGCAGTCAGCCGAGGTGGCACCA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATGCAACATCTGTGAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGGATGATGGCCAGGTATaGACCGCAGGGGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: NATSVKMGISCLTFPSLEDDGQV*TAGAHC
Trigger: GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATC...CTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTAGAGGTCGGACGCCCTaGCGCTCCACGCAGTCGCGC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCRGRTP*RSTQSR
Trigger: GCGCGACTGCGTGGAGCGCCAGGGCGTCCGACCTCT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAGACACAGACACGCGGTaGTCCTCGGACCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTDTDTR*SSDQAS
Trigger: GCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTC...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTCCAGCACAGCGATGCTaGGGGCCGTGGACACAGACA +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPPAQRC*GPWTQT
Trigger: TGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGG...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGCTCCAGCACAGCGATaGTGCGGGCCGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLAPAQR*CGPWTQ
Trigger: CTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAGC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTTCCTGGCCCGGGTTGTaGACGTCGCAGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETISWPGL*TSQMSS
Trigger: GGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGA...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTGTCCATGGTCAGTGCTaGCAAGAGGCACCTGCCATT +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSVHGQC*QEAPAI
Trigger: AATGGCAGGTGCCTCTTGGCAGCACTGACCATGGAC...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCACCGACCACTCCATTCTaGCTGGGGTCTGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSPTTPF*LGSACC
Trigger: ACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGG...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTTGAGAGTACAGGCATaGGCCACCAAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPLRVQA*ATKPSP
Trigger: GGGGCTGGGCTTGGTGGCTCATGCCTGTACTCTCAA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATCATCTTCTCTCAGGTaGAGAGGTCGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTSSSLR*RGRTPW
Trigger: CCAGGGCGTCCGACCTCTGCACCTGAGAGAAGATGA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCCGCTCACCGCATACTaGAGCTTCACGGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRPLTAY*SFTAGS
Trigger: GGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTCAGCCAGGAGCACACTaGCAACGTCCCGGCATTCGT +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPQPGAH*QRPGIR
Trigger: ACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTG...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GAGGCCGTTGATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGTGTTCAAACTTCAATaGAACATCTGTGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: EAVDHALSGDDGQVCTAGVFKLQ*NICENG
Trigger: CCCATTTTCACAGATGTTGCATTGAAGTTTGAACAC...CCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAACCGCAGGGGCTCACTaGTATCCCGTGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGTAGAH*YPVSPH
Trigger: GTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGATGATGGCCAGGTATaGACCGCAGGGGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGDDGQV*TAGAHC
Trigger: GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTCCTTGCTCCTCTCCTaGAGGCCTTGCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVSLLLS*RPCFTT
Trigger: GGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTTTGCCCAGGCTGAAGTaGAGTGGTGCCACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETILPRLK*SGATSA
Trigger: AGCCGAGGTGGCACCACTGCACTTCAGCCTGGGCAA...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCGATGCTGCGGGCCGTaGACACAGACACGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRRCCGP*TQTRGG
Trigger: ACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCACTGGTCTCGAACTCCTaGCCTCAAGTGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSLVSNS*PQVTRL
Trigger: CAGACGGGTCACTTGAGGCCAGGAGTTCGAGACCAG...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTCCTGGGGGAGGCAGGTaGTGGCTAGATTTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVPGGGR*WLDFRV
Trigger: GACCCTAAAATCTAGCCACCACCTGCCTCCCCCAGG...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTACAATTGGCAGTGAGTaGAGGCCTGTGACATGGGAA +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSTIGSE*RPVTWE
Trigger: TTCCCATGTCACAGGCCTTCACTCACTGCCAATTGT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACTCACTGCTATCCCGTaGGTCCTCACTGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTLTAIP*VLTEPN
Trigger: GTTTGGCTCAGTGAGGACTCACGGGATAGCAGTGAG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTACTCCCCAGTCTCACTaGATTGCTAAACTCCAACGC +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSTPQSH*IAKLQR
Trigger: GCGTTGGAGTTTAGCAATTCAGTGAGACTGGGGAGT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAACAGCTGTTGAGCGGTaGGGGCACCGAGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILTAVER*GHRGAV
Trigger: CACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTTGGCAGAGTTCATCATaGCCTTCCATCTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSWQSSS*PSIFPS
Trigger: TGACGGGAAGATGGAAGGGCATGATGAACTCTGCCA...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACATGGATAACCAGGTCCTaGCCCGGGTTGTGCACGTCG +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTWITRS*PGLCTS
Trigger: CGACGTGCACAACCCGGGCCAGGACCTGGTTATCCA...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCAGTCAGGTCAACCAGCTaGACCCACTGCAGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSVRSTS*THCSLL
Trigger: CAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGAC...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGGTTTTTTGTTAACAGGGTaGAGGCCGTTGATCATGCCC +
Preference number: 4 (lower is better)
Translates to: DLVVFVNRVEAVDHALSGFLLTG*RPLIMP
Trigger: GGGCATGATCAACGGCCTCCACCCTGTTAACAAAAA...ACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTGGGATCTTCTGGAGCTaGATGCCGGGCAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIGIFWS*MPGNAV
Trigger: GACAGCATTGCCCGGCATCCAGCTCCAGAAGATCCC...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTTGCTTGAAGTCTGCCTaGTGGACACACAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSCLKSA*WTHRDF
Trigger: GAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCA...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGCGCGGCCCTACCAGGTaGCCAAGGAACTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVERGPTR*PRNCLS
Trigger: GGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCG...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
3UTR CAA 72 bp AGGTGGTGGCTAGATTTTAGGGTCTTAACAATGCCATaGGGTCCAGTCCCTGCAGTGAGTCCACGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: RWWLDFRVLTMP*GPVPAVSPRSR
Trigger: TCTAGAACGTGGACTCACTGCAGGGACTGGACCCAATGGCATTGTTAAGACCCTAAAATCTAGCCACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTATTCGTTGTTATGCTTaGCCTGCTGGGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSIRCYA*PAGWYR
Trigger: TCTGTACCACCCAGCAGGTCAAGCATAACAACGAAT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTAGTGCGATTCAGAAATaGGCTCCAGGGGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVSAIQK*APGALF
Trigger: AAAGAGGGCCCCTGGAGCTCATTTCTGAATCGCACT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCCTCCTGGGTTGAAGTaGTGCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCPPGLK*CSCLSL
Trigger: GAGGCTGAGGCAGGAGCATCACTTCAACCCAGGAGG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGTCCTGGCCCGGGTTGTaGACGTCGCAGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVESWPGL*TSQMSS
Trigger: GGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGA...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp AATGCAACATCTGTGAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGCAGGAGCTGAGCAGCTaGCTCTTCAAAGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: NATSVKMGISCLTFPSLEQELSS*LFKGFE
Trigger: CTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG...CTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTCTCCAAGGGCTGGTCTaGACTACCTATCAATGCGGG +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETILQGLV*TTYQCG
Trigger: CCCGCATTGATAGGTAGTGCAGACCAGCCCTTGGAG...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATTATGCTTGACCTGCTaGGTGGTACAGATGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTLCLTC*VVQMPD
Trigger: GTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTGCTTCACCACCTGTTTaGAAGAAGTGCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSASPPV*KKCLLP
Trigger: AGGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGC...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGCCAGTCGGGATCTTCTaGAGCTGGATGCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLPVGIF*SWMPGN
Trigger: ATTGCCCGGCATCCAGCTCCAGAAGATCCCGACTGG...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAGGGGGAGGCAGGTGGTaGCTAGATTTTAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTGGGRW*LDFRVL
Trigger: TAAGACCCTAAAATCTAGCCACCACCTGCCTCCCCC...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp CTGAAGCAGGGCTGTGGCGTGGGTGAACTACAGTATTaGACATCTTTATACGGATTAAGGAGTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LKQGCGVGELQY*TSLYGLRSWVR
Trigger: CCTGACCCAACTCCTTAATCCGTATAAAGATGTCAAATACTGTAGTTCACCCACGCCACAGCCCTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGTGTGCACGTCGCAGATaGGCTCCAGCACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVECARRR*APAQRC
Trigger: GCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACA...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTTCCAACATGAAAGTCTaGCTGACCGTGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETISNMKV*LTVGSL
Trigger: CAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGA...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGCCTACAAACGGCAGCTaGAACTGCCACACGGCGATA +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLPTNGS*NCHTAI
Trigger: TATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGG...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGGGCTGTGGCGTGGGTaGACTACAGTATTTGACATC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGGLWRG*TTVFDI
Trigger: GATGTCAAATACTGTAGTTCACCCACGCCACAGCCC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAAGCAACACACTCCCATaGGGTATGCTGACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGSNTLP*GMLTLR
Trigger: TCTGAGGGTCAGCATACCTCATGGGAGTGTGTTGCT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATTGTTATGCTTGACCTaGTGGGTGGTACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTLLCLT*WVVQMP
Trigger: GGGCATCTGTACCACCCAGCAGGTCAAGCATAACAA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTACAAGAATGGAGGGATaGAGACCAGCAGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSTRMEG*RPAAIF
Trigger: GAAAATAGCTGCTGGTCTGCATCCCTCCATTCTTGT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGGGAGTCTCGCCATATTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGGVSPY*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAATATGGCGAGACTCC...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACCACTTTTCCAAGGTTaGACTGAGCAACACACTCCC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTPLFQG*TEQHTP
Trigger: GGGAGTGTGTTGCTCAGTGCAACCTTGGAAAAGTGG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTCCCAAGAAAGAACTCTaGCCTCTTCTGGCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVPKKEL*PLLAGV
Trigger: TACTCCTGCCAGAAGAGGGCAGAGTTCTTTCTTGGG...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGGACCCCCTTTTCCCTaGCCAGGGATTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVEGPPFP*PGIELQ
Trigger: CTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCC...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACTGTTGAGATTTGCCTaGATGGTCAGGCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTLLRFA*MVRRLS
Trigger: GGACAATCGCCTGACCATCCAGGCAAATCTCAACAG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTTCACCTTTCCGTCACTaGAGCAAGTATAGACTGTTC +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSSPFRH*SKYRLF
Trigger: GAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGA...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTTCACCTTTCCGTCACTaGAGCAAGTATAGACTGTTC +
Preference number: 4 (lower is better)
Translates to: LDLVVFVNRVEAVDHALSSPFRH*SKYRLF
Trigger: GAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGA...ACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTTGAGTCCTCATGGGTaGGTTTCCACAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVLSPHG*VSTRLL
Trigger: CAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCAGCCAAATGTGGCCATTaGAACAGACTGCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSAKCGH*NRLPVC
Trigger: GCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGC...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGCACCGGAGCCAAATGTaGCCATTGGAACAGACTGCC +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLHRSQM*PLEQTA
Trigger: GGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGTG...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGAAAGGCCTTCCAACTaGGTGTGTGGAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLERPSN*VCGNLG
Trigger: CCCCAGGTTTCCACACACCCAGTTGGAAGGCCTTTC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGAGGCCGTGGGGTCCTTaGAGGCGGCGAATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVERPWGP*RRRISP
Trigger: AGGAGAAATTCGCCGCCTCCAAGGACCCCACGGCCT...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTAGCAACTTCTGTTTTTaGGCCAACTTTGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSSNFCF*ANFEET
Trigger: TGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACCCACTGCAGTCTGTTaGGATTTGCCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTPTAVC*DLPGWS
Trigger: TGACCATCCAGGCAAATCTCAACAGACTGCAGTGGG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGGAGACAATTGGCAGTaGGTGAAGGCCTGTGACATG +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTGDNWQ*VKACDM
Trigger: CATGTCACAGGCCTTCACTCACTGCCAATTGTCTCC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GACCTGGTAGTTTTTGTTAACAGGGTGGAGGCCGTTGATCATGCCCTCAGTGGTTGCTTAAAAAGGTTTTaGACTGAAGATTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLVVFVNRVEAVDHALSGCLKRF*TEDSRS
Trigger: GCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCA...ACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTGTTAGGCTGAACTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCVRLNS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAGCCTAAC...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTGTTTCTTCTAGGAAGTaGGACCCCACTGTACAATTT +
Preference number: 4 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSVSSRK*DPTVQF
Trigger: AAATTGTACAGTGGGGTCTCACTTCCTAGAAGAAAC...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGACAAAGGTTCCATTCTTaGGACACTCCCCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGQRFHS*DTPQSH
Trigger: GTGAGACTGGGGAGTGTCTCAAGAATGGAACCTTTG...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AAAGGTTTTGAGAGTAACAAATTGGACCTGGTAGTTTTTGTTAACAGGGTGGAGACAATTGGCAGTGAGTaGAGGCCGTGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KGFESNKLDLVVFVNRVETIGSE*RPWGPW
Trigger: CCAAGGACCCCACGGCCTTCACTCACTGCCAATTGT...CTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTCAGGAGCTGAGCAGCTaGCTCTTCAAAGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPQELSS*LFKGFE
Trigger: CTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGTTCATCGTCAGCATTaGCCATCCCAGGCGAATCCA +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTVHRQH*PSQANP
Trigger: TGGATTCGCCTGGGATGGGCAATGCTGACGATGAAC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTGAAGTGCCTTCTTCCTaGTGTTCATCGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVEVPSS*CSSSAL
Trigger: CAATGCTGACGATGAACAGCAGGAAGAAGGCACTTC...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTAGATTGCTTGAAGTCTaGCTGGTGGACACACAGGGA +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIRLLEV*LVDTQG
Trigger: TCCCTGTGTGTCCACCAGGCAGACTTCAAGCAATCT...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTTCAGGCGATTGTCCATaGTCAGTGCTGCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRSGDCP*SVLPRG
Trigger: GCCTCTTGGCAGCACTGACCATGGACAATCGCCTGA...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGGAGCGAGTCATCAGTaGGCTCCTCTACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLGASHQ*APLHLL
Trigger: AAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACAGCATCTCCAGTCGTaGGGAGCGAGTCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILQHLQS*GASHQW
Trigger: CCACTGATGACTCGCTCCCCACGACTGGAGATGCTG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAAGTGCCTCCAAGGGCTaGTCTGCACTACCTATCAAT +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGSASKG*SALPIN
Trigger: ATTGATAGGTAGTGCAGACCAGCCCTTGGAGGCACT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGACGACTCCAACTCTCTaGGTCCAGCCATTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGTTPTL*VQPFQR
Trigger: CCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACCAGCAGCTATTTTCTaGGAACAAAACATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTPAAIF*EQNISP
Trigger: TGGGCTGATGTTTTGTTCTCAGAAAATAGCTGCTGG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTAAGCCCAGCCCCATCTaGGACATCTTAACAGACCAC +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRKPSPI*DILTDH
Trigger: GTGGTCTGTTAAGATGTCTCAGATGGGGCTGGGCTT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTAGCCTCCTGAGTAACTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCSLLSN*DYRHAP
Trigger: TGGCGCATGCCTGTAATCTCAGTTACTCAGGAGGCT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCATTGATGACCCAACCTTaGAGGCAAAGGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSLMTQP*RQRFHS
Trigger: AGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAA...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTACCAGCTGGACCCACTaGAGTCTGTTGAGATTTGCC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCTSWTH*SLLRFA
Trigger: GGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCAGTGAACATTCAGCCCTaGTTTGGAGATCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSVNIQP*FGDQKK
Trigger: CTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCAC...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTGTTCCCTGGTCAAGTaGATCTCCACAGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPCSLVK*ISTASI
Trigger: AATCGAAGCTGTGGAGATGCACTTGACCAGGGAACA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGCCATTGGAACAGACTaGCTGTTTGCGATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGAIGTD*LFAICE
Trigger: TTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACTGGATGCCGGGCAATaGTGTCATGGAGCAAACACC +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILLDAGQ*CHGANT
Trigger: GGTGTTTGCTCCATGACAGCATTGCCCGGCATCCAG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTATCTTCTGGAGCTGGATaGCGGGCAATGCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILSSGAG*RAMLSW
Trigger: CCATGACAGCATTGCCCGGCATCCAGCTCCAGAAGA...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACTCCTGTGCTTTACATaGAGCGCGGCAATAGCACTT +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTLLCFT*SAAIAL
Trigger: AAGTGCTATTGCCGCGCTGCATGTAAAGCACAGGAG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTGATGGAAAGATCCTGTaGCAATCAACCAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIDGKIL*QSTSDP
Trigger: AGGGTCACTGGTTGATTGGCACAGGATCTTTCCATC...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCCACTCCATTCTGACTaGGGTCTGCATGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCPLHSD*GLHAVS
Trigger: AGACACAGCATGCAGACCCCAGTCAGAATGGAGTGG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTCTGTGCACAGGTAACTaGTCCATTTCTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVLCTGN*SISFHK
Trigger: CTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAG...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTTTTTTGTTAACAGGGTaGAGGCCGTTGATCATGCCC +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIFLLTG*RPLIMP
Trigger: GGGCATGATCAACGGCCTCCACCCTGTTAACAAAAA...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATCCTTCTCTTCAGGCTaGAGGAAGTTTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTSFSSG*RKFSMA
Trigger: TGCCATAGAAAACTTCCTCCAGCCTGAAGAGAAGGA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCATACGGATTAAGGAGTTaGGTCAGGAAACCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSYGLRS*VRKPDD
Trigger: GTCATCAGGTTTCCTGACCCAACTCCTTAATCCGTA...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGCTTATGAAGAATATTaGCTGGGGGTGGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTAYEEY*LGVGVR
Trigger: CCTCACTCCCACCCCCAGCCAATATTCTTCATAAGC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTGTAGTGCTAAGGATGTaGGATGATCTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIVVLRM*DDLVQP
Trigger: GGGTTGAACCAGATCATCCCACATCCTTAGCACTAC...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp AGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATaGGACCTGGTAGTTTTTGTTAACAGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSCLFKGFESNK*DLVVFVNRVEA
Trigger: GGCCTCCACCCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAATACACTGGGAGAGGTaGTTCCTGACTCAATTGTGT +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGIHWER*FLTQLC
Trigger: ACACAATTGAGTCAGGAATCACCTCTCCCAGTGTAT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTGTCATATTCAACCATaGGCTTTGCCAGTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPCHIQP*ALPVAL
Trigger: TAGAGCCACTGGCAAAGCTCATGGTTGAATATGACA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTTCATTCTACACGTCATaGGCACCTACCCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRSFYTS*APTLCK
Trigger: CTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGA...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGAAAATGGGAATCAGCTaGCTCACCTTTCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGKMGIS*LTFPSL
Trigger: CAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACTCTCCTGCAGGCCTTaGTTCACCACCTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILLSCRP*FTTCLE
Trigger: TTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTCCAATCAGCACCCGTaGAGTTCTGTCATCATACTC +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGSNQHP*SSVIIL
Trigger: GAGTATGATGACAGAACTGCACGGGTGCTGATTGGA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTATGTTAAACCATCTATaGAGATGGCAGGCTACATCC +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVMLNHL*RWQATS
Trigger: GGATGTAGCCTGCCATCTGCATAGATGGTTTAACAT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGCTTCATGTGTTCCCTaGTCAAGTGCATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRASCVP*SSASPQ
Trigger: CTGTGGAGATGCACTTGACCAGGGAACACATGAAGC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTCTCCAGACAGACCCCTaGATACTAAATGAAACATCT +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVLQTDP*ILNETS
Trigger: AGATGTTTCATTTAGTATCCAGGGGTCTGTCTGGAG...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGCACCTGAAAAACGTCTaGTGCCATTCCCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGHLKNV*CHSHFS
Trigger: GGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTG...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAAACCATCTATGCAGATaGCAGGCTACATCCTATCAA +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTNHLCR*QATSYQ
Trigger: TTGATAGGATGTAGCCTGCCATCTGCATAGATGGTT...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp GTTAGATCCTTTAGAGGGATTTTTGATGACCCAACCTaGAAGGCAAAGGTTCCATTCTTGAGACACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VRSFRGIFDDPT*KAKVPFLRHSP
Trigger: TGGGGAGTGTCTCAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGATCTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTACCAGCTGGTGTACTTaGATCCTCTCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRTSWCT*ILSLVV
Trigger: TACCACCAATGAGAGGATTCAAGTACACCAGCTGGT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAAAAGTGGCACACATTTaGTACTGTGCACAGGTAACT +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGKVAHI*YCAQVT
Trigger: AGTTACCTGTGCACAGTATCAAATGTGTGCCACTTT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGTGACATGGGAATTGTaGACATTCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRVTWEL*TFSPAL
Trigger: CAAAGCAGGGCTGAATGTTCACAATTCCCATGTCAC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGCCTGTTTGCGATCTGTaGATGGCAAGATCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLPVCDL*MARSLY
Trigger: GTAAAGAGATCTTGCCATTCACAGATCGCAAACAGG...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTATTGCAAGAGGCACCTaGAAAACGTCTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCIARGT*KTSGAI
Trigger: AATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAAT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTATTTCTCCAGTTCCTaGAACAGTTATTACGGTCAC +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVYFSSS*NSYYGH
Trigger: GTGACCGTAATAACTGTTTCAGGAACTGGAGAAATA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGGCTAAGGATGTGGGATaGTCTGGTTCAACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGAKDVG*SGSTQK
Trigger: TTTTTGGGTTGAACCAGATCATCCCACATCCTTAGC...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGAGGGGAATCCCAAATaGGAAAGAGCTAAAACCAAT +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGEGNPK*ERAKTN
Trigger: ATTGGTTTTAGCTCTTTCTCATTTGGGATTCCCCTC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACGGCATTCGTTGTTATaGTTGACCTGCTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILRHSLL*LTCWVV
Trigger: TACCACCCAGCAGGTCAAGCATAACAACGAATGCCG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTACACATTTGATACTGTaGACAGGTAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVTHLIL*TGNWSI
Trigger: AATGGACCAGTTACCTGTGCACAGTATCAAATGTGT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGTCTGGAAATGGAGAGTaGGATTCAGAAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLSGNGE*DSEMSS
Trigger: GGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGA...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCATTCAGCCCTGCTTTaGAGATCAGAAGAAGACACC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCHSALL*RSEEDT
Trigger: GGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGTTTGTCTGCAGTCATaGAGACAATTGGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTVCLQS*RQLAVS
Trigger: ACTCACTGCCAATTGTCTCCATGACTGCAGACAAAC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGAAGCAATTTAAGTTCTaGAGCCCGAAGGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLKQFKF*SPKAVP
Trigger: TGGAACTGCCTTCGGGCTCCAGAACTTAAATTGCTT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGTTGGGGGCAGAACCTaGATTCCAAATATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRVGGRT*IPNIKG
Trigger: TCCCTTGATATTTGGAATCCAGGTTCTGCCCCCAAC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTGGGAGGTTGCCGTCATaGTATCATCTAAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCGRLPS*YHLSTN
Trigger: GTTGGTACTTAGATGATACCATGACGGCAACCTCCC...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGAGGGGAAACAGGTGGTaGGAAGGAGCTAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGRGNRW*EGAKIS
Trigger: TGAAATTTTAGCTCCTTCCCACCACCTGTTTCCCCT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGCATCAATTGGAGAAATaGCCAACCAGCGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGHQLEK*PTSDLV
Trigger: TACCAAGTCGCTGGTTGGCCATTTCTCCAATTGATG...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp GTAGTTTTGGCAGATATAATAGTAGGTAGAGATTGCTaGAAGTCTGCCTGGTGGACACACAGGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: VVLADIIVGRDC*KSAWWTHRDFR
Trigger: TCTGAAATCCCTGTGTGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTGCTTAAAAAGGTTTTaGACTGAAGATTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPCLKRF*TEDSRS
Trigger: GCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGAACGCCAAAAATAGGTaGCTCCACTGCTTTCAATCT +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLNAKNR*LHCFQS
Trigger: AGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTGTTTTCTGCATTGACTaGTATAAAATCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIVFCID*YKILRR
Trigger: CCTCCTGAGGATTTTATATCAGTCAATGCAGAAAAC...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCCATCTTCCCGTCACTaGTTATTTAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCPSSRH*LFRRQE
Trigger: CTCCTGTCTTCTAAATAATCAGTGACGGGAAGATGG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCAGGCAGAGAAAATGTaGTACCTATGTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCQAEKM*YLCGYQ
Trigger: CTGATACCCACATAGGTATCACATTTTCTCTGCCTG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGCAATTCACAAACTCTaGGGCAGTTTAACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTAIHKL*GSLTVA
Trigger: TGCAACAGTTAAACTGCCTCAGAGTTTGTGAATTGC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACATGCTCTATACTAGGTTaGACAGCAGATACCATGCTA +
Preference number: 4 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTCSILG*TADTML
Trigger: TAGCATGGTATCTGCTGTTCAACCTAGTATAGAGCA...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCATTTTTGGAGTTTGGCTaGATTCCATTAAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSFLEFG*IPLKDS
Trigger: ACTGTCCTTTAATGGAATTCAGCCAAACTCCAAAAA...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGCTACATCCTATCAATaGGACATGGACTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRATSYQ*DMDWLT
Trigger: TGTTAGCCAGTCCATGTCTCATTGATAGGATGTAGC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCGGCGAATTTCTCCTTaGACTCAGCAACTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCRRISP*TQQLLF
Trigger: AAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACAGTCTGTTGAGATTTaGCTGGATGGTCAGGCGATT +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILQSVEI*LDGQAI
Trigger: AATCGCCTGACCATCCAGGCAAATCTCAACAGACTG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTTCTGTGATCCAGGTGTaGAGATACACTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCSVIQV*RYTSPK
Trigger: CTTAGGAGAAGTGTATCTGCACACCTGGATCACAGA...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAAAAGGGCAGGGGCTTTaGAGTAACCTCTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILKGQGL*SNLLIQ
Trigger: CTGGATTAAGAGGTTACTGCAAAGCCCCTGCCCTTT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTATAGTAGGTAGAGATTaGTTGAAGTCTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRIVGRD*LKSAWW
Trigger: CCACCAGGCAGACTTCAAGCAATCTCTACCTACTAT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTTCCATTCCAGGAATTaGAGCAATTCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPFHSRN*SNSQTL
Trigger: CAGAGTTTGTGAATTGCTGCAATTCCTGGAATGGAA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTGAATTATGGAAACCATaGAGAGACTCAAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPELWKP*RDSKQS
Trigger: GGACTGTTTTGAGTCTCTGCATGGTTTCCATAATTC...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp CAGGAGCTGAGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATTGGACCTGGAGAGTTTAATCAACTaGTGTTCAAACTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: QELSSCLFKGFESNKLDLESLIN*CSNFNA
Trigger: TGCATTGAAGTTTGAACACCAGTTGATTAAACTCTC...CAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTATTTTTGAGTCCTCATaGGTGGGTTTCCACAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRIFESS*VGFHKA
Trigger: AGCCTTGTGGAAACCCACCCATGAGGACTCAAAAAT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGGAGGAAGTTTTCTATaGCAGAGTTCATCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRGGSFL*QSSSCP
Trigger: AGGGCATGATGAACTCTGCCATAGAAAACTTCCTCC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACAGGAGCAGAAACGATaGAAAGATCCTGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILQEQKR*KDPVPI
Trigger: GATTGGCACAGGATCTTTCCATCGTTTCTGCTCCTG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGTGAGGGGAAACAGGTaGTGGGAAGGAGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILVRGNR*WEGAKI
Trigger: AATTTTAGCTCCTTCCCACCACCTGTTTCCCCTCAC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp CAAATTTTAGGACGGTATAGAGGATGTAAGTTTGAATaGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTC +
Preference number: 4 (lower is better)
Translates to: QILGRYRGCKFE*QEAPEKRLVPF
Trigger: GAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAAAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTATCAATGCAACATCTGTaGAAATGGGAATCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILSMQHL*KWESAA
Trigger: GGCAGCTGATTCCCATTTTCACAGATGTTGCATTGA...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGATTTGTTCATCTTCTTTaGGATATGTCCAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGFVHLL*DMSNQH
Trigger: GTGCTGATTGGACATATCTCAAAGAAGATGAACAAA...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTAGCTGCAGACACAAATaGCTTCCACCATACAATGTT +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCSCRHK*LPPYNV
Trigger: AACATTGTATGGTGGAAGTCATTTGTGTCTGCAGCT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAAAAAACGCAGGACACTaGTATGTAATCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGKNAGH*YVIFRK
Trigger: TTTCCTGAAGATTACATATCAGTGTCCTGCGTTTTT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTGTAATAACTAAAATATaGTTACCCCACAGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIVITKI*LPHRAL
Trigger: TAAGGCCCTGTGGGGTAATCATATTTTAGTTATTAC...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGAATCATGTAAGCAATTaGGGGGAATCCCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLNHVSN*GESQMR
Trigger: TCTCATTTGGGATTCCCCTCAATTGCTTACATGATT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTCTGACTCAATTGTGTTaGATGAAGAGATGGATTCTT +
Preference number: 4 (lower is better)
Translates to: KPNSTQQGPYPSSLEETILTQLC*MKRWIL
Trigger: AAGAATCCATCTCTTCATGCAACACAATTGAGTCAG...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTTGTTGGTACATCAGATaGCACGGACCAAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCCWYIR*HGPSNL
Trigger: TAAATTGCTTGGTCCGTGGCATCTGATGTACCAACA...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTGATGTAAGTTTGAATTaGAAGAGGCACCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPDVSLN*KRHLKN
Trigger: GTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATC...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACATCACATTTACAAAACTaGCATTATGTACAGCACTAC +
Preference number: 4 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTSHLQN*HYVQHY
Trigger: GTAGTGCTGTACATAATGGCAGTTTTGTAAATGTGA...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTGAGAGTTTAATCAACTaGTGTTCAAACTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVESLIN*CSNFNA
Trigger: TGCATTGAAGTTTGAACACCAGTTGATTAAACTCTC...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCTCAATTGTGTTGCATaGAGAGATGGATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRLNCVA*RDGFFS
Trigger: GGAAAAGAATCCATCTCTTCATGCAACACAATTGAG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAATCAACTGGTGTTCAAACTTCAATGCAACATCTGTGAAAATGGGAATCAGCTCAATGCAACATCTGTaGAAATGGGAATCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LINWCSNFNATSVKMGISSMQHL*KWESAA
Trigger: GGCAGCTGATTCCCATTTTCACAGATGTTGCATTGA...GCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR TCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGAGTTTACAATCTTCTaGAAAACCCCACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLEFTIF*KTPLLH
Trigger: ATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTGAAATAGCCTTTGACTaGTTTGAGATTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCEIAFD*FEIDRK
Trigger: CTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTC...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGTGTTCAAACTTCAATaGAACATCTGTGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLVFKLQ*NICENG
Trigger: CCCATTTTCACAGATGTTGCATTGAAGTTTGAACAC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTTCTGTTCAACTTAATTaGACAAGCTTACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRSVQLN*TSLQHQ
Trigger: CTGGTGCTGTAAGCTTGTGCAATTAAGTTGAACAGA...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTATTCCTGTATTTGTCTaGCTATTTGCCGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCIPVFV*LFAVCT
Trigger: AGTACAGACGGCAAATAGGCAGACAAATACAGGAAT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGCCATTAAAGGACAGTTaGATTTCACATGCTCTATAC +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGPLKDS*ISHALY
Trigger: GTATAGAGCATGTGAAATGCAACTGTCCTTTAATGG...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGATGATTTGTATCTGTaGCATGGAAATGAGTTTACA +
Preference number: 4 (lower is better)
Translates to: LMLISKRLQLSESSHFKGDDLYL*HGNEFT
Trigger: TGTAAACTCATTTCCATGGCACAGATACAAATCATC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGGTAAGGATGATAAAGTaGCACACATTTGATACTGTG +
Preference number: 4 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGVRMIK*HTFDTV
Trigger: CACAGTATCAAATGTGTGCCACTTTATCATCCTTAC...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTAATGTGATACCTATGTaGGTATCAGACTCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRNVIPM*VSDSPN
Trigger: ATTTGGGGAGTCTGATACCCACATAGGTATCACATT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTACTCAAAACAGTCCATaGTGGGCTAATTGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRTQNSP*WANCKD
Trigger: GTCTTTACAATTAGCCCACCATGGACTGTTTTGAGT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACCAACTTTTCTGGATTaGGGGGTATTCCAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILPTFLD*GVFQAK
Trigger: TTTTGCTTGGAATACCCCCCAATCCAGAAAAGTTGG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp GTCCATGGTGGGCTAATTGTAAAGACATTCCTGTATTaGTCTGCCTATTTGCCGTCTGTACTTACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: VHGGLIVKTFLY*SAYLPSVLTLN
Trigger: ATTCAAAGTAAGTACAGACGGCAAATAGGCAGACAAATACAGGAATGTCTTTACAATTAGCCCACCATGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGATAAACGCTCTTCTTaGAATTACCACCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRDKRSS*NYHQMR
Trigger: TCTCATTTGGTGGTAATTTCAAGAAGAGCGTTTATC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTATTACACAAACTACAGTaGTCAGGGAAAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILLHKLQ*SGKVCL
Trigger: CAAACAGACTTTCCCTGAGCACTGTAGTTTGTGTAA...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTTTTGCGATCTGTGAATaGCAAGATCTCTTTACACAA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRFAICE*QDLFTQ
Trigger: TTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAA...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAACTTTTAATCTCTGTTaGTACATCAGATGCCACGGA +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILTFNLC*YIRCHG
Trigger: TCCGTGGCATCTGATGTACCAACAGAGATTAAAAGT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
3UTR CAA 72 bp AATGAGAAAGAGCTAAAACCAATGGTAGTTCATCAATaGGAGAAATGGCCAACCAGCGACTTGGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: NEKELKPMVVHQ*EKWPTSDLVKK
Trigger: TTTCTTTACCAAGTCGCTGGTTGGCCATTTCTCCAATTGATGAACTACCATTGGTTTTAGCTCTTTCTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR TCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACATAATTTTTGCTTATaGAGAATATTGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILHNFCL*RILAGG
Trigger: ACCCCCAGCCAATATTCTTCATAAGCAAAAATTATG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAATTGTATCGAATCTTTaGTCCTGTGCTTTACATGCA +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILIVSNL*SCALHA
Trigger: TGCATGTAAAGCACAGGAGCAAAGATTCGATACAAT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCTGCCAGTTGATACTTaGACTAATGGCAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRLPVDT*TNGKNK
Trigger: TTTATTTTTGCCATTAGTGCAAGTATCAACTGGCAG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR GCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCTTTACATTAGGTGCTaGAGGAACAACAAAGATAAA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRLYIRC*RNNKDK
Trigger: TTTATCTTTGTTGTTCCTGCAGCACCTAATGTAAAG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTACAAAACAGTCCATGGTaGGCTAATTGTAAAGACATT +
Preference number: 4 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILQNSPW*ANCKDI
Trigger: AATGTCTTTACAATTAGCCCACCATGGACTGTTTTG...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CCA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCATCATAATGAATTATaGAAACCATGCAGAGACTCA +
Preference number: 4 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRHHNEL*KPCRDS
Trigger: TGAGTCTCTGCATGGTTTCCATAATTCATTATGATG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 90 bp TCCCCAGACGGCGCAGGCCCGTCGTCCGCGGGCCCCACCCGGGCCTaGTCGGCCGTGTTCATCTTCTCTCAGGTGCAGAGGTCGGACGCC +
Preference number: 5 (lower is better)
Translates to: SPDGAGPSSAGPTRA*SAVFIFSQVQRSDA
Trigger: GGCGTCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 90 bp CGGGCCCCACCCGGGCCTGGTCGGCCGTGTTCATCTTCTCTCAGGTaGAGAGGTCGGACGCCCTGGCGCTCCACGCAGTCGCGCGACCAC +
Preference number: 5 (lower is better)
Translates to: RAPPGPGRPCSSSLR*RGRTPWRSTQSRDH
Trigger: GTGGTCGCGCGACTGCGTGGAGCGCCAGGGCGTCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 90 bp GCGGGCACCGAGGTGCGGTGGATAACCAGGTCCTGGCCCGGGTTGTaGACGTCGCAGATGAGCTCCAGCACAGCGATGCTGCGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AGTEVRWITRSWPGL*TSQMSSSTAMLRAV
Trigger: CACGGCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 90 bp AGCTCCAGCACAGCGATGCTGCGGGCCGTGGACACAGACACGCGGTaGTCCTCGGACCAAGCCAGCGGTTCCAGGCCGCTCACCGCATAC +
Preference number: 5 (lower is better)
Translates to: SSSTAMLRAVDTDTR*SSDQASGSRPLTAY
Trigger: GTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 90 bp TGGTCCTCGGACCAAGCCAGCGGTTCCAGGCCGCTCACCGCATACTaGAGCTTCACGGCCGGCTCCCGCCGAGTCACCATGAGGCGGAAT +
Preference number: 5 (lower is better)
Translates to: WSSDQASGSRPLTAY*SFTAGSRRVTMRRN
Trigger: ATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 90 bp CTGTTGAGCGGTGCGGGCACCGAGGTGCGGTGGATAACCAGGTCCTaGCCCGGGTTGTGCACGTCGCAGATGAGCTCCAGCACAGCGATG +
Preference number: 5 (lower is better)
Translates to: LLSGAGTEVRWITRS*PGLCTSQMSSSTAM
Trigger: CATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 90 bp ACTTTGAGGAGACAGCTGTTGAGCGGTGCGGGCACCGAGGTGCGGTaGATAACCAGGTCCTGGCCCGGGTTGTGCACGTCGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: TLRRQLLSGAGTEVR*ITRSWPGLCTSQMS
Trigger: GCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS-3UTR CAA 90 bp ATCATGCCCTCAGTGGTGATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTACAGGGTGGAGGCCGTaGATCATGCCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: IMPSVVMMARYAPQGLTATGWRP*IMPSVV
Trigger: CACCACTGAGGGCATGATCAACGGCCTCCACCCTGT...AGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS GCA 90 bp AGGAGCACACTGCCAACGTCCCGGCATTCGTTGTTATGCTTGACCTaGTGGGTGGTACAGATGCCCGACCACTCCATTCTGACTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RSTLPTSRHSLLCLT*WVVQMPDHSILTGV
Trigger: GACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 90 bp AGGACAGCCAGGAGCACACTGCCAACGTCCCGGCATTCGTTGTTATaGTTGACCTGCTGGGTGGTACAGATGCCCGACCACTCCATTCTG +
Preference number: 5 (lower is better)
Translates to: RTARSTLPTSRHSLL*LTCWVVQMPDHSIL
Trigger: CAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 90 bp AGCACACTGCCAACGTCCCGGCATTCGTTGTTATGCTTGACCTGCTaGGTGGTACAGATGCCCGACCACTCCATTCTGACTGGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: STLPTSRHSLLCLTC*VVQMPDHSILTGVC
Trigger: GCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 90 bp TGCTCCTCTCCTGCAGGCCTTGCTTCACCACCTGTTTGGAAGAAGTaGCTTCTTCCTGCTGTTCATCGTCAGCATTGCCCATCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: CSSPAGLASPPVWKK*LLPAVHRQHCPSQA
Trigger: CGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATGCAACATCTGTGAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGAGAAGGACCCCGCCGTaGCCAGGCAACGCGGCCCTA +
Preference number: 5 (lower is better)
Translates to: NATSVKMGISCLTFPSLERRTPP*PGNAAL
Trigger: TAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCT...CTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS GCA 90 bp GTTGAGATTTGCCTGGATGGTCAGGCGATTGTCCATGGTCAGTGCTaGCAAGAGGCACCTGCCATTAGCATCGCAACCCATGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: VEICLDGQAIVHGQC*QEAPAISIATHGRP
Trigger: TGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 90 bp CTTGACCTGCTGGGTGGTACAGATGCCCGACCACTCCATTCTGACTaGGGTCTGCATGCTGTGTCTCCTCTGAAACTCAGCAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: LDLLGGTDARPLHSD*GLHAVSPLKLSKIP
Trigger: GGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp CAGGAGCTGAGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATTGGACCTGAGGTCCTGGCCCGGGTaGTGCACGTCGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: QELSSCLFKGFESNKLDLRSWPG*CTSQMS
Trigger: GCTCATCTGCGACGTGCACAACCCGGGCCAGGACCT...CAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS TCA 90 bp AAAGCCTTCCCCTCAGGGTTGAACACCCTATCCAACATGAAAGTCTaGCTGACCGTGGGGTCCTTGGAGGCGGCGAATTTCTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: KAFPSGLNTLSNMKV*LTVGSLEAANFSLH
Trigger: GTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 90 bp CACAGCTTCGATTTTCCCTTGGATTTCCAGGAGTTTCTCTTCCATTaGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCATC +
Preference number: 5 (lower is better)
Translates to: HSFDFPLDFQEFLFH*LTASSISSRGERVI
Trigger: GATGACTCGCTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTCGGAGTCTCGCCATATaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSRSLAI*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAATATGGCGAGACTCCG...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTCCTCACTGAGCCAAACACATCTGAGAGTTTAATCAACTGGTGTTCAAACTTCGCACGCGCGGTAGTCTaGTCCCTACCCGCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VLTEPNTSESLINWCSNFARAVV*SLPARC
Trigger: GCACCGGGCGGGTAGGGACAAGACTACCGCGCGTGC...GAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CAA 90 bp CAGGAGCTGAGCAGCTGCCTCTTCAAAGGTTTTGAGAGTAACAAATTGGACCTGAAGGCCGTGGGGTCCTaGGAGGCGGCGAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: QELSSCLFKGFESNKLDLKAVGS*EAANFS
Trigger: GGAGAAATTCGCCGCCTCCAAGGACCCCACGGCCTT...CAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS TCA 90 bp CATAGATCTCAGTCAGGTCAACCAGCTGGACCCACTGCAGTCTGTTaGGATTTGCCTGGATGGTCAGGCGATTGTCCATGGTCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: HRSQSGQPAGPTAVC*DLPGWSGDCPWSVL
Trigger: CAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAGATCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 90 bp TGCAGGCCTTGCTTCACCACCTGTTTGGAAGAAGTGCCTTCTTCCTaGTGTTCATCGTCAGCATTGCCCATCCCAGGCGAATCCACTAGT +
Preference number: 5 (lower is better)
Translates to: CRPCFTTCLEEVPSS*CSSSALPIPGESTS
Trigger: ACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GATGATGGCCAGGTATGCACCGCAGGGGCTCACTGCTATCCCGTGAGTCCTCACGCCTCTTCAAAGGTTTaGAGAGTAACAAATTGGACC +
Preference number: 5 (lower is better)
Translates to: DDGQVCTAGAHCYPVSPHASSKV*RVTNWT
Trigger: GGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGC...GTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CCA 90 bp CACTGGAGCAAGTATAGACTGTTCCATTCTGTTTGTCTGCAGTCATaGAGACAATTGGCAGTGAGTGAAGGCCGTGGGGTCCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: HWSKYRLFHSVCLQS*RQLAVSEGRGVLGG
Trigger: GCCTCCAAGGACCCCACGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAAGGTCCTGGCCCGGGTaGTGCACGTCGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTRSWPG*CTSQMS
Trigger: GCTCATCTGCGACGTGCACAACCCGGGCCAGGACCT...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTACAGGGTGGAGGCCGTaGATCATGCCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVTGWRP*IMPSVV
Trigger: CACCACTGAGGGCATGATCAACGGCCTCCACCCTGT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGCTGACCGTGGGGTCCTaGGAGGCGGCGAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGLTVGS*EAANFS
Trigger: GGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAG...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTTGGATGGTCAGGCGATaGTCCATGGTCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVWMVRR*SMVSAA
Trigger: GGCAGCACTGACCATGGACAATCGCCTGACCATCCA...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTTTGAGGAGACAGCTGTaGAGCGGTGCGGGCACCGAG +
Preference number: 5 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCLRRQL*SGAGTE
Trigger: CTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAA...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTGCGGCGAATTTCTCCTaGCACTCAGCAACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSAANFS*HSATSV
Trigger: AACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGC...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTGTGATCTGCCTGCCTTaGCTTCCCAAAGTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSVICLP*LPKVLR
Trigger: TCTCAACACTTTGGGAAGCAAAGGCAGGCAGATCAC...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTAGGCAGTCTCCAGTCTaGCCCAGGCTGAAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIRQSPV*PRLKCS
Trigger: ACTGCACTTCAGCCTGGGCAAGACTGGAGACTGCCT...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGCAAGTATAGACTGTCAGTCATGGAGACAATaGGCAGTGAGTGAAGGCCGT +
Preference number: 5 (lower is better)
Translates to: ENGNQLPHLSVTGASIDCQSWRQ*AVSEGR
Trigger: ACGGCCTTCACTCACTGCCAATTGTCTCCATGACTG...ACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS TCA 90 bp GACTGTTCCATTCTGTTTGTCTGCAGTCATGGAGACAATTGGCAGTaGGTGAAGGCCTGTGACATGGGAATTGTGAACATTCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: DCSILFVCSHGDNWQ*VKACDMGIVNIQPC
Trigger: GCAGGGCTGAATGTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATGCAACATCTGTGAAAATGGGAATCAGCTGCCTCACCTTTCCGTCACTGGAGGCGGCGAATTTCTCCTaGCACTCAGCAACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NATSVKMGISCLTFPSLEAANFS*HSATSV
Trigger: AACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGC...CTCCAGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS TCA 90 bp GTTTGTCTGCAGTCATGGAGACAATTGGCAGTGAGTGAAGGCCTGTaGCATGGGAATTGTGAACATTCAGCCCTGCTTTGGAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: VCLQSWRQLAVSEGL*HGNCEHSALLWRSE
Trigger: TTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 90 bp GGAGCCAAATGTGGCCATTGGAACAGACTGCCTGTTTGCGATCTGTaGATGGCAAGATCTCTTTACACAAACTACAGTGCTCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GAKCGHWNRLPVCDL*MARSLYTNYSAQGK
Trigger: CTTTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 90 bp CCTGTTTGGAAGAAGTGCCTTCTTCCTGCTGTTCATCGTCAGCATTaGCCATCCCAGGCGAATCCACTAGTAAGATTTTTGAGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PVWKKCLLPAVHRQH*PSQANPLVRFLSPH
Trigger: ATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 90 bp AGGTGTGCAGATACACTTCTCCTAAGACTCGCTTCATGTGTTCCCTaGTCAAGTGCATCTCCACAGCTTCGATTTTCCCTTGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: RCADTLLLRLASCVP*SSASPQLRFSLGFP
Trigger: TGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTAATCAACTGGTGTTCAAACTTCAATGCAACATCTGTGAAAATGGGAATCAGCTTGAGGAGACAGCTGTaGAGCGGTGCGGGCACCGAG +
Preference number: 5 (lower is better)
Translates to: LINWCSNFNATSVKMGISLRRQL*SGAGTE
Trigger: CTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAA...GCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CAA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAACCCACTGCAGTCTGTaGAGATTTGCCTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: LMLISKRLQLSESSHFKGTHCSL*RFAWMV
Trigger: GACCATCCAGGCAAATCTCAACAGACTGCAGTGGGT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTCATTCGTTGTTATGCTaGACCTGCTGGGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVHSLLC*TCWVVQ
Trigger: CTGTACCACCCAGCAGGTCAAGCATAACAACGAATG...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGTGTTCATCGTCAGCATaGCCCATCCCAGGCGAATCC +
Preference number: 5 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGCSSSA*PIPGES
Trigger: GGATTCGCCTGGGATGGGCAATGCTGACGATGAACA...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTGTAGGTAGAGATTGCTaGAAGTCTGCCTGGTGGACA +
Preference number: 5 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVVGRDC*KSAWWT
Trigger: TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTAC...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACACCCAGTCTCACTGAATaGCTAAACTCCAACGCACAG +
Preference number: 5 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTPSLTE*LNSNAQ
Trigger: CTGTGCGTTGGAGTTTAGCAATTCAGTGAGACTGGG...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTAATCAACTGGTGTTCAAACTTCAATGCAACATCTGTGAAAATGGGAATCAGCCGGCCGAATGTAATTTaGCCAGGCCGCGAGGGACGC +
Preference number: 5 (lower is better)
Translates to: LINWCSNFNATSVKMGISRPNVI*PGREGR
Trigger: GCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCG...GCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CAA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTGCCTTCCCCTCAGGGTaGAACACCCTATCCAACATG +
Preference number: 5 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRAFPSG*NTLSNM
Trigger: CATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGC...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTGACCAGCTGGTGTACTaGAATCCTCTCATTGGTGGT +
Preference number: 5 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPDQLVY*NPLIGG
Trigger: ACCACCAATGAGAGGATTCAAGTACACCAGCTGGTC...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTACGTCCCGGCATTCGTaGTTATGCTTGACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCTSRHS*LCLTCW
Trigger: CCAGCAGGTCAAGCATAACAACGAATGCCGGGACGT...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACACAGTCATGGAGACAATaGGCAGTGAGTGAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTQSWRQ*AVSEGL
Trigger: CAGGCCTTCACTCACTGCCAATTGTCTCCATGACTG...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTGCTTCACCACCTGTTaGGAAGAAGTGCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPCFTTC*EEVPSS
Trigger: GGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGTCTTAACAATGCCATaGGGTCCAGTCCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTVLTMP*GPVPAV
Trigger: CACTGCAGGGACTGGACCCAATGGCATTGTTAAGAC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTAAGACATTCCTGTATTaGTCTGCCTATTTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSKTFLY*SAYLPS
Trigger: AGACGGCAAATAGGCAGACAAATACAGGAATGTCTT...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 90 bp ATTGTGTTGCATGAAGAGATGGATTCTTTTCCTACAAACGGCAGCTaGAACTGCCACACGGCGATATTACCGTTTTCAAAGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: IVLHEEMDSFPTNGS*NCHTAILPFSKRTA
Trigger: GGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCAAGCTTCGATTTTCCCTaGGATTTCCAGGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSSFDFP*DFQEFL
Trigger: GAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCT...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AAACCTAACTCAACCCAGCAAGGTCCTTATCCAAGCTCTCTAGAAGAGACCATTATTAACGTGTTAAACTaGCTGGTAGGTCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: KPNSTQQGPYPSSLEETIINVLN*LVGPAC
Trigger: GCAGGCTGGACCTACCAGCAAGTTTAACACGTTAAT...AATGGTCTCTTCTAGAGAGCTTGGATAAGGACCTTGCTGGGTTGAGTTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTTTTCCATTCCAGGAATaGCAGCAATTCACAAACTCT +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSFPFQE*QQFTNS
Trigger: AGAGTTTGTGAATTGCTGCAATTCCTGGAATGGAAA...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGTGGCCAACCAGCGACTaGGTAAAGAAACAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLWPTSD*VKKQRF
Trigger: GAACCTCTGTTTCTTTACCAAGTCGCTGGTTGGCCA...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAGTTTTTGAGCCAACTTaGAGGAGACAGCTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTVFEPT*RRQLLS
Trigger: GCTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAAC...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTTAGTCTCTGGAAATGGAGAGTGCGATTCAGAAATGAGCTCCAGGGGCCCTCTCTCATTTTTCGATTATaGTGCTCATATTCCCACCAA +
Preference number: 5 (lower is better)
Translates to: FSLWKWRVRFRNELQGPSLIFRL*CSYSHQ
Trigger: TTGGTGGGAATATGAGCACAATAATCGAAAAATGAG...AGAGGGCCCCTGGAGCTCATTTCTGAATCGCACTCTCCATTTCCAGAGACTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGACATTCAGCCCTGCTTaGGAGATCAGAAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLTFSPA*EIRRRH
Trigger: GTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAAGTAAGTGTTCCTCATaGGTTACAAAGCTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LMLISKRLQLSESSHFKGSKCSS*VTKLGL
Trigger: TAGCCCCAGCTTTGTAACCAATGAGGAACACTTACT...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTACTCACTCATTCTACACGTCATGAGCACCTACCCTGTGCAAGGCACTTTACAATAGAGGATGTAAGTTaGAATTGCAAGAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: LLTHSTRHEHLPCARHFTIEDVS*NCKRHL
Trigger: CAGGTGCCTCTTGCAATTCAAACTTACATCCTCTAT...TGTAAAGTGCCTTGCACAGGGTAGGTGCTCATGACGTGTAGAATGAGTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GATCTAAACAACTCTCTGGTTAGGACCCCAGATTTTATAGTAGGTCTTGGCCCTTTTGATGACCCAACCTaGAAGGCAAAGGTTCCATTC +
Preference number: 5 (lower is better)
Translates to: DLNNSLVRTPDFIVGLGPFDDPT*KAKVPF
Trigger: GAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAA...AGGGCCAAGACCTACTATAAAATCTGGGGTCCTAACCAGAGAGTTGTTTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp AATTGCAAGAGGCACCTGAAAAACGTCTGGTGCCATTCCCACTTTTCCAAGGTTATGCTCTATACTAGGTaGAACAGCAGATACCATGCT +
Preference number: 5 (lower is better)
Translates to: NCKRHLKNVWCHSHFSKVMLYTR*NSRYHA
Trigger: AGCATGGTATCTGCTGTTCAACCTAGTATAGAGCAT...AACCTTGGAAAAGTGGGAATGGCACCAGACGTTTTTCAGGTGCCTCTTGCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTCCTCACTGAGCCAAACACATCTGAGAGTTTAATCAACTGGTGTTCAAACTTCACTGTTCCATTCTGTTaGTCTGCAGTCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: VLTEPNTSESLINWCSNFTVPFC*SAVMET
Trigger: TGTCTCCATGACTGCAGACAAACAGAATGGAACAGT...GAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS-3UTR CAA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCATATTTGTCTGCCTATTaGCCGTCTGTACTTACTTTG +
Preference number: 5 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSYLSAY*PSVLTL
Trigger: CAAAGTAAGTACAGACGGCAAATAGGCAGACAAATA...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTTTGGCAGATATAATAGTAGGTAGAGATTGCTTGAAGTCTGCCTGGTGGACAAGTAGCTTTGTAGTGTaGAACACAGGGGAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: VLADIIVGRDCLKSAWWTSSFVV*NTGEVN
Trigger: GTTCACTTCCCCTGTGTTCAACACTACAAAGCTACT...TGTCCACCAGGCAGACTTCAAGCAATCTCTACCTACTATTATATCTGCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGATGGTAGTTCATCAATaGGAGAAATGGCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLMVVHQ*EKWPTS
Trigger: GCTGGTTGGCCATTTCTCCAATTGATGAACTACCAT...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp CTAATGCTCATCTCAAAACGACTCCAACTCTCTGAGTCCAGCCATTTCAAAGGAGAATCATGTAAGCAATaGAGGGGAATCCCAAATGAG +
Preference number: 5 (lower is better)
Translates to: LMLISKRLQLSESSHFKGESCKQ*RGIPNE
Trigger: CTCATTTGGGATTCCCCTCAATTGCTTACATGATTC...TCCTTTGAAATGGCTGGACTCAGAGAGTTGGAGTCGTTTTGAGATGAGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAATACATAAGAGCCTCTaGCAGCCACTACTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILIHKSL*QPLLSC
Trigger: GCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTAT...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTACTGTTCCATTCTGTTaGTCTGCAGTCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRTVPFC*SAVMET
Trigger: TGTCTCCATGACTGCAGACAAACAGAATGGAACAGT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp ATGCAACCACGTTGTAGCTTAAAGGGTCTAATTGTATCGAATCTTTGCTCCTGTCCACTAGTAAGATTTTaGAGTCCTCATGGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: MQPRCSLKGLIVSNLCSCPLVRF*SPHGWV
Trigger: AACCCACCCATGAGGACTCAAAAATCTTACTAGTGG...ACAGGAGCAAAGATTCGATACAATTAGACCCTTTAAGCTACAACGTGGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GTTCTGGAGCCCGAAGGCAGTTCCAAACCAAAGCAAGGATTAAAACCTAACTCATCAGGGAAAGTCTGTTaGTTCATCTTCTTTGAGATA +
Preference number: 5 (lower is better)
Translates to: VLEPEGSSKPKQGLKPNSSGKVC*FIFFEI
Trigger: TATCTCAAAGAAGATGAACAAACAGACTTTCCCTGA...TGAGTTAGGTTTTAATCCTTGCTTTGGTTTGGAACTGCCTTCGGGCTCCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TGTGCCATGGAAATGAGTTTACAATCTTCTGAAAAACCCCACTTCTTCATCGGGAGTCCTGACGATGATTaGTATCTGTGCCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: CAMEMSLQSSEKPHFFIGSPDDD*YLCHGN
Trigger: ATTTCCATGGCACAGATACAAATCATCGTCAGGACT...CCCGATGAAGAAGTGGGGTTTTTCAGAAGATTGTAAACTCATTTCCATGGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTCCTGACTCAATTGTGTaGCATGAAGAGATGGATTCT +
Preference number: 5 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRPDSIV*HEEMDS
Trigger: AGAATCCATCTCTTCATGCAACACAATTGAGTCAGG...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGTTCTAGAAAAACTGTaGCCATGTTTACTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLVLEKL*PCLLLE
Trigger: CTCTAGGAGTAAACATGGCAACAGTTTTTCTAGAAC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGGATGTAAGTTTGAATaGCAAGAGGCACCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLGCKFE*QEAPEK
Trigger: TTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 90 bp GATTATTGTGCTCATATTCCCACCAAAACAATACACTGGGAGAGGTaGTTCCTGACTCAATTGTGTTGCATGAAGAGATGGATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: DYCAHIPTKTIHWER*FLTQLCCMKRWILF
Trigger: GAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 90 bp TGTTTGCGATCTGTGAATGGCAAGATCTCTTTACACAAACTACAGTaGTCAGGGAAAGTCTGTTTGTTCATCTTCTTTGAGATATGTCCA +
Preference number: 5 (lower is better)
Translates to: CLRSVNGKISLHKLQ*SGKVCLFIFFEICP
Trigger: TGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp GGAGTTTGGCTGAATTCCATTAAAGGACAGTTGCATTTCACATGCTCTATACTAGCCTCTTCAAAGGTTTaGAGAGTAACAAATTGGACC +
Preference number: 5 (lower is better)
Translates to: GVWLNSIKGQLHFTCSILASSKV*RVTNWT
Trigger: GGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGC...TAGTATAGAGCATGTGAAATGCAACTGTCCTTTAATGGAATTCAGCCAAACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGGTTTGTTCATCTTCTTaGAGATATGTCCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLVCSSS*RYVQSA
Trigger: TGCTGATTGGACATATCTCAAAGAAGATGAACAAAC...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TTAGGACGGTATAGAGGATGTAAGTTTGAATTGCAAGAGGCACCTGAAAAACGTAATTGTATCGAATCTTaGCTCCTGTGCTTTACATGC +
Preference number: 5 (lower is better)
Translates to: LGRYRGCKFELQEAPEKRNCIES*LLCFTC
Trigger: GCATGTAAAGCACAGGAGCAAAGATTCGATACAATT...ACGTTTTTCAGGTGCCTCTTGCAATTCAAACTTACATCCTCTATACCGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS-3UTR CAA 90 bp TCCTTTAGAGGGATTTTTGATGACCCAACCTTGAAGGCAAAGGTTCCATTCTTGTCCATTAAAGGACAGTaGCATTTCACATGCTCTATA +
Preference number: 5 (lower is better)
Translates to: SFRGIFDDPTLKAKVPFLSIKGQ*HFTCSI
Trigger: TATAGAGCATGTGAAATGCAACTGTCCTTTAATGGA...CAAGAATGGAACCTTTGCCTTCAAGGTTGGGTCATCAAAAATCCCTCTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp GCCCCGAGCGCCGCCGAGCCAAGAAGGACCCCGCCGTaGCCAGGCAACGCGGCCCTACCAGGTGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: APSAAEPRRTPP*PGNAALPGGQG
Trigger: TCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS GCA 72 bp CCCCGAGCGCCGCCGAGCCAAGAAGGACCCCGCCGTTaGCAGGCAACGCGGCCCTACCAGGTGGCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: PRAPPSQEGPRR*QATRPYQVAKE
Trigger: TTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CAA 90 bp GGTGCGGGCACCGAGGTGCGGTGGATAACCAGGTCCTGGCCCGGGTaGTGCACGTCGCAGATGAGCTCCAGCACAGCGATGCTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: GAGTEVRWITRSWPG*CTSQMSSSTAMLRA
Trigger: GGCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 72 bp CCCGGGCCTGGTCGGCCGTGTTCATCTTCTCTCAGGTaGAGAGGTCGGACGCCCTGGCGCTCCACGCAGTCG +
Preference number: 6 (lower is better)
Translates to: PGPGRPCSSSLR*RGRTPWRSTQS
Trigger: CGACTGCGTGGAGCGCCAGGGCGTCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 72 bp ACAGCGATGCTGCGGGCCGTGGACACAGACACGCGGTaGTCCTCGGACCAAGCCAGCGGTTCCAGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: TAMLRAVDTDTR*SSDQASGSRPL
Trigger: GAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 72 bp GACCAAGCCAGCGGTTCCAGGCCGCTCACCGCATACTaGAGCTTCACGGCCGGCTCCCGCCGAGTCACCATG +
Preference number: 6 (lower is better)
Translates to: DQASGSRPLTAY*SFTAGSRRVTM
Trigger: CATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 72 bp GGTGCGGGCACCGAGGTGCGGTGGATAACCAGGTCCTaGCCCGGGTTGTGCACGTCGCAGATGAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GAGTEVRWITRS*PGLCTSQMSSS
Trigger: GCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS GCA 72 bp GCCAGGCAACGCGGCCCTACCAGGTGGCCAAGGAACTaGCTGTCCAGAAAAAGGACAGCGAGCGGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: ARQRGPTRWPRN*LSRKRTASGEP
Trigger: GGGCTCCCCGCTCGCTGTCCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CCA 72 bp TGTTCATCTTCTCTCAGGTGCAGAGGTCGGACGCCCTaGCGCTCCACGCAGTCGCGCGACCACCTCCCGGAC +
Preference number: 6 (lower is better)
Translates to: CSSSLRCRGRTP*RSTQSRDHLPD
Trigger: GTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCGTCCGACCTCTGCACCTGAGAGAAGATGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 72 bp AGACAGCTGTTGAGCGGTGCGGGCACCGAGGTGCGGTaGATAACCAGGTCCTGGCCCGGGTTGTGCACGTCG +
Preference number: 6 (lower is better)
Translates to: RQLLSGAGTEVR*ITRSWPGLCTS
Trigger: CGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CCA 72 bp GACCCCGCCGTTGCCAGGCAACGCGGCCCTACCAGGTaGCCAAGGAACTGCCTGTCCAGAAAAAGGACAGCG +
Preference number: 6 (lower is better)
Translates to: DPAVARQRGPTR*PRNCLSRKRTA
Trigger: CGCTGTCCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS TCA 72 bp GGAAACGCACGGGGCGGTAAAGGGGAGGCTCGTCGGTaGGATGGCGCCGGATCTCGCTTCTCAGAGGCATTC +
Preference number: 6 (lower is better)
Translates to: GNARGGKGEARR*DGAGSRFSEAF
Trigger: GAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS GCA 72 bp GAGGTGCGGTGGATAACCAGGTCCTGGCCCGGGTTGTaGACGTCGCAGATGAGCTCCAGCACAGCGATGCTG +
Preference number: 6 (lower is better)
Translates to: EVRWITRSWPGL*TSQMSSSTAML
Trigger: CAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CAA 72 bp ACCGAGGTGCGGTGGATAACCAGGTCCTGGCCCGGGTaGTGCACGTCGCAGATGAGCTCCAGCACAGCGATG +
Preference number: 6 (lower is better)
Translates to: TEVRWITRSWPG*CTSQMSSSTAM
Trigger: CATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CAA 90 bp CATTCAGAGAGCTTCCCCAGCGTGAACTCTCGGCCGAATGTAATTTaGCCAGGCCGCGAGGGACGCAGAGAGGGGCTGCCACCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: HSESFPSVNSRPNVI*PGREGRREGLPPGG
Trigger: CCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTCTCTGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CAA 72 bp AGCTTCCCCAGCGTGAACTCTCGGCCGAATGTAATTTaGCCAGGCCGCGAGGGACGCAGAGAGGGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SFPSVNSRPNVI*PGREGRREGLP
Trigger: TGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CAA 90 bp TCAAAGAGGACAGCCAGGAGCACACTGCCAACGTCCCGGCATTCGTaGTTATGCTTGACCTGCTGGGTGGTACAGATGCCCGACCACTCC +
Preference number: 6 (lower is better)
Translates to: SKRTARSTLPTSRHS*LCLTCWVVQMPDHS
Trigger: GGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp GCACACTGCCAACGTCCCGGCATTCGTTGTTATGCTTaGCCTGCTGGGTGGTACAGATGCCCGACCACTCCA +
Preference number: 6 (lower is better)
Translates to: AHCQRPGIRCYA*PAGWYRCPTTP
Trigger: TGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp AGGAGCACACTGCCAACGTCCCGGCATTCGTTGTTATaGTTGACCTGCTGGGTGGTACAGATGCCCGACCAC +
Preference number: 6 (lower is better)
Translates to: RSTLPTSRHSLL*LTCWVVQMPDH
Trigger: GTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp AGCACACTGCCAACGTCCCGGCATTCGTTGTTATGCTaGACCTGCTGGGTGGTACAGATGCCCGACCACTCC +
Preference number: 6 (lower is better)
Translates to: STLPTSRHSLLC*TCWVVQMPDHS
Trigger: GGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp ACAGCCAGGAGCACACTGCCAACGTCCCGGCATTCGTaGTTATGCTTGACCTGCTGGGTGGTACAGATGCCC +
Preference number: 6 (lower is better)
Translates to: TARSTLPTSRHS*LCLTCWVVQMP
Trigger: GGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 90 bp ACAGCCAGGAGCACACTGCCAACGTCCCGGCATTCGTTGTTATGCTaGACCTGCTGGGTGGTACAGATGCCCGACCACTCCATTCTGACT +
Preference number: 6 (lower is better)
Translates to: TARSTLPTSRHSLLC*TCWVVQMPDHSILT
Trigger: AGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp CCTGCTGGGTGGTACAGATGCCCGACCACTCCATTCTaGCTGGGGTCTGCATGCTGTGTCTCCTCTGAAACT +
Preference number: 6 (lower is better)
Translates to: PAGWYRCPTTPF*LGSACCVSSET
Trigger: AGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp TGCCTGGATGGTCAGGCGATTGTCCATGGTCAGTGCTaGCAAGAGGCACCTGCCATTAGCATCGCAACCCAT +
Preference number: 6 (lower is better)
Translates to: CLDGQAIVHGQC*QEAPAISIATH
Trigger: ATGGGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp CTGCCAACGTCCCGGCATTCGTTGTTATGCTTGACCTaGTGGGTGGTACAGATGCCCGACCACTCCATTCTG +
Preference number: 6 (lower is better)
Translates to: LPTSRHSLLCLT*WVVQMPDHSIL
Trigger: CAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 72 bp ACCAGCTGGACCCACTGCAGTCTGTTGAGATTTGCCTaGATGGTCAGGCGATTGTCCATGGTCAGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: TSWTHCSLLRFA*MVRRLSMVSAA
Trigger: GGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp CCCTCAGGGTTGAACACCCTATCCAACATGAAAGTCTaGCTGACCGTGGGGTCCTTGGAGGCGGCGAATTTC +
Preference number: 6 (lower is better)
Translates to: PSGLNTLSNMKV*LTVGSLEAANF
Trigger: GAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp CAGTCAGGTCAACCAGCTGGACCCACTGCAGTCTGTTaGGATTTGCCTGGATGGTCAGGCGATTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: QSGQPAGPTAVC*DLPGWSGDCPW
Trigger: CCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 72 bp CCAACGTCCCGGCATTCGTTGTTATGCTTGACCTGCTaGGTGGTACAGATGCCCGACCACTCCATTCTGACT +
Preference number: 6 (lower is better)
Translates to: PTSRHSLLCLTC*VVQMPDHSILT
Trigger: AGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGACGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp ACTTCTGTTTTTGAGCCAACTTTGAGGAGACAGCTGTaGAGCGGTGCGGGCACCGAGGTGCGGTGGATAACC +
Preference number: 6 (lower is better)
Translates to: TSVFEPTLRRQL*SGAGTEVRWIT
Trigger: GGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372146.5
ENST00000483873.6
CDS CAA 90 bp CCACAGCTTCGATTTTCCCTTGGATTTCCAGGAGTTTCTCTTCCATaGGCTCACGGCCTCCAGCATCTCCAGTCGTGGGGAGCGAGTCAT +
Preference number: 6 (lower is better)
Translates to: PQLRFSLGFPGVSLP*AHGLQHLQSWGASH
Trigger: ATGACTCGCTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp CCTGCAGGCCTTGCTTCACCACCTGTTTGGAAGAAGTaGCTTCTTCCTGCTGTTCATCGTCAGCATTGCCCA +
Preference number: 6 (lower is better)
Translates to: PAGLASPPVWKK*LLPAVHRQHCP
Trigger: TGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp CTGTTCCATTCTGTTTGTCTGCAGTCATGGAGACAATaGGCAGTGAGTGAAGGCCGTGGGGTCCTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LFHSVCLQSWRQ*AVSEGRGVLGG
Trigger: GCCTCCAAGGACCCCACGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CAA 90 bp CACCTGCCATTAGCATCGCAACCCATGGGAGACCAGCTGGTGTACTaGAATCCTCTCATTGGTGGTAAAGCCTTCCCCTCAGGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: HLPLASQPMGDQLVY*NPLIGGKAFPSGLN
Trigger: GTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp TGCTTCACCACCTGTTTGGAAGAAGTGCCTTCTTCCTaGTGTTCATCGTCAGCATTGCCCATCCCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: CFTTCLEEVPSS*CSSSALPIPGE
Trigger: TTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp CTGACCGTGGGGTCCTTGGAGGCGGCGAATTTCTCCTaGCACTCAGCAACTTCTGTTTTTGAGCCAACTTTG +
Preference number: 6 (lower is better)
Translates to: LTVGSLEAANFS*HSATSVFEPTL
Trigger: CAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp AAGGCCGTGGGGTCCTTGGAGGCGGCGAATTTCTCCTaGCACTCAGCAACTTCTGTTTTTGAGCCAACTTTG +
Preference number: 6 (lower is better)
Translates to: KAVGSLEAANFS*HSATSVFEPTL
Trigger: CAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS GCA 72 bp AACCTCTTAATCCAGTCGGGATCTTCTGGAGCTGGATaGCGGGCAATGCTGTCATGGAGCAAACACCTTCTA +
Preference number: 6 (lower is better)
Translates to: NLLIQSGSSGAG*RAMLSWSKHLL
Trigger: TAGAAGGTGTTTGCTCCATGACAGCATTGCCCGGCATCCAGCTCCAGAAGATCCCGACTGGATTAAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp TTAGCATCGCAACCCATGGGAGACCAGCTGGTGTACTaGAATCCTCTCATTGGTGGTAAAGCCTTCCCCTCA +
Preference number: 6 (lower is better)
Translates to: LASQPMGDQLVY*NPLIGGKAFPS
Trigger: TGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 90 bp CATCGTCAGCATTGCCCATCCCAGGCGAATCCACTAGTAAGATTTTaGAGTCCTCATGGGTGGGTTTCCACAAGGCTTCTGAAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: HRQHCPSQANPLVRF*SPHGWVSTRLLKGF
Trigger: AAACCCCTTCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp CAGTCATGGAGACAATTGGCAGTGAGTGAAGGCCTGTaGCATGGGAATTGTGAACATTCAGCCCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: QSWRQLAVSEGL*HGNCEHSALLW
Trigger: CCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp CGGGTGGGGATGCTAGTGTTTTCTGTGATCCAGGTGTaGAGATACACTTCTCCTAAGACTCGCTTCATGTGT +
Preference number: 6 (lower is better)
Translates to: RVGMLVFSVIQV*RYTSPKTRFMC
Trigger: ACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp GAAGCACCGGAGCCAAATGTGGCCATTGGAACAGACTaGCTGTTTGCGATCTGTGAATGGCAAGATCTCTTT +
Preference number: 6 (lower is better)
Translates to: EAPEPNVAIGTD*LFAICEWQDLF
Trigger: AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp TCCAGTCGGGATCTTCTGGAGCTGGATGCCGGGCAATaGTGTCATGGAGCAAACACCTTCTATATATCAAAC +
Preference number: 6 (lower is better)
Translates to: SSRDLLELDAGQ*CHGANTFYISN
Trigger: GTTTGATATATAGAAGGTGTTTGCTCCATGACAGCATTGCCCGGCATCCAGCTCCAGAAGATCCCGACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp CATTGCCCATCCCAGGCGAATCCACTAGTAAGATTTTaGAGTCCTCATGGGTGGGTTTCCACAAGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: HCPSQANPLVRF*SPHGWVSTRLL
Trigger: CAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CCA 72 bp AAGTATAGACTGTTCCATTCTGTTTGTCTGCAGTCATaGAGACAATTGGCAGTGAGTGAAGGCCGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: KYRLFHSVCLQS*RQLAVSEGRGV
Trigger: GACCCCACGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483873.6
CDS CAA 90 bp ACCTGTTTGGAAGAAGTGCCTTCTTCCTGCTGTTCATCGTCAGCATaGCCCATCCCAGGCGAATCCACTAGTAAGATTTTTGAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: TCLEEVPSSCCSSSA*PIPGESTSKIFESS
Trigger: TGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp AAGAAGTGCCTTCTTCCTGCTGTTCATCGTCAGCATTaGCCATCCCAGGCGAATCCACTAGTAAGATTTTTG +
Preference number: 6 (lower is better)
Translates to: KKCLLPAVHRQH*PSQANPLVRFL
Trigger: CAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp GAAGAAGTGCCTTCTTCCTGCTGTTCATCGTCAGCATaGCCCATCCCAGGCGAATCCACTAGTAAGATTTTT +
Preference number: 6 (lower is better)
Translates to: EEVPSSCCSSSA*PIPGESTSKIF
Trigger: AAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp CATGAAGAGATGGATTCTTTTCCTACAAACGGCAGCTaGAACTGCCACACGGCGATATTACCGTTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: HEEMDSFPTNGS*NCHTAILPFSK
Trigger: CTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATCTCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp GCTCATATTCCCACCAAAACAATACACTGGGAGAGGTaGTTCCTGACTCAATTGTGTTGCATGAAGAGATGG +
Preference number: 6 (lower is better)
Translates to: AHIPTKTIHWER*FLTQLCCMKRW
Trigger: CCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp ATTCTGTTTGTCTGCAGTCATGGAGACAATTGGCAGTaGGTGAAGGCCTGTGACATGGGAATTGTGAACATT +
Preference number: 6 (lower is better)
Translates to: ILFVCSHGDNWQ*VKACDMGIVNI
Trigger: AATGTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp TACAGTGCTCAGGGAAAGTCTGTTTGTTCATCTTCTTaGAGATATGTCCAATCAGCACCCGTGCAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: YSAQGKSVCSSS*RYVQSAPVQFC
Trigger: ACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 90 bp GGCAAGATCTCTTTACACAAACTACAGTGCTCAGGGAAAGTCTGTTaGTTCATCTTCTTTGAGATATGTCCAATCAGCACCCGTGCAGTT +
Preference number: 6 (lower is better)
Translates to: GKISLHKLQCSGKVC*FIFFEICPISTRAV
Trigger: AACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp AAGGCCTGTGACATGGGAATTGTGAACATTCAGCCCTaGTTTGGAGATCAGAAGAAGACACCAAAATACATA +
Preference number: 6 (lower is better)
Translates to: KACDMGIVNIQP*FGDQKKTPKYI
Trigger: TATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp AATACACTGGGAGAGGTGATTCCTGACTCAATTGTGTaGCATGAAGAGATGGATTCTTTTCCTACAAACGGC +
Preference number: 6 (lower is better)
Translates to: NTLGEVIPDSIV*HEEMDSFPTNG
Trigger: GCCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp AGATCAGAAGAAGACACCAAAATACATAAGAGCCTCTaGCAGCCACTACTAAGCTGCAACTACACTTCTGGT +
Preference number: 6 (lower is better)
Translates to: RSEEDTKIHKSL*QPLLSCNYTSG
Trigger: ACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS TCA 72 bp TACACTTCTGGTAAGGATGATAAAGTGGCACACATTTaGTACTGTGCACAGGTAACTGGTCCATTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: YTSGKDDKVAHI*YCAQVTGPFLS
Trigger: GGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS GCA 72 bp TCTGTGAATGGCAAGATCTCTTTACACAAACTACAGTaGTCAGGGAAAGTCTGTTTGTTCATCTTCTTTGAG +
Preference number: 6 (lower is better)
Translates to: SVNGKISLHKLQ*SGKVCLFIFFE
Trigger: CTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5
CDS CAA 72 bp TCTTTACACAAACTACAGTGCTCAGGGAAAGTCTGTTaGTTCATCTTCTTTGAGATATGTCCAATCAGCACC +
Preference number: 6 (lower is better)
Translates to: SLHKLQCSGKVC*FIFFEICPIST
Trigger: GGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372146.5