RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF3C2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115207

Ensembl transcript IDs: ENST00000264720.7, ENST00000359541.6, ENST00000415683.2, ENST00000423998.1, ENST00000431028.5, ENST00000454704.5, ENST00000457098.5, ENST00000457748.1, ENST00000470115.1, ENST00000480989.1, ENST00000484680.1, ENST00000493511.1, ENST00000495298.1, ENST00000622534.1

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCA +
Preference number: 1 (lower is better)
Translates to: SKESWGGRPKGPGLA*SLSREGPQFLWLCA
Trigger: TGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
3UTR CCA 90 bp TGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCT +
Preference number: 1 (lower is better)
Translates to: WDLRSPGEAGLKVQA*HDHCPGKAPSSYGS
Trigger: AGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
3UTR GCA 90 bp GCAGCCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCA +
Preference number: 1 (lower is better)
Translates to: AACPGRVENAPLPPA*AALVLYGADHGMNP
Trigger: TGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR TCA 90 bp AGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTGATACGG +
Preference number: 1 (lower is better)
Translates to: SFSVSSSLRRVGDPR*SRRMVWTFRTVLIR
Trigger: CCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR CCA 90 bp GGTTACCCTAAAGAGGAAGTTTCAGAAGGCAGTAATATTGGATCCTaGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTT +
Preference number: 1 (lower is better)
Translates to: GYPKEEVSEGSNIGS*NSQTGAFMQIPFSV
Trigger: AACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTGAAACTTCCTCTTTAGGGTAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR CCA 90 bp TACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTaGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACT +
Preference number: 1 (lower is better)
Translates to: YTHSQVVTKTPSTFT*LYPLNNMLNMSSLT
Trigger: AGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR CAA 90 bp CCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: PGKAPSSYGSVHRGH*FLTDFTPRIWCGPR
Trigger: CCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
3UTR-3UTR CCA 90 bp CCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCGCAGCATTGGGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: PVQAELRMPLSLLHAQHWDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...CCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR-3UTR GCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGTTCCTATGGCTCTGTaGATAGGGGCCATTTGTTCT +
Preference number: 2 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLVPMAL*IGAICS
Trigger: AGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
3UTR CAA 90 bp CCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGATCATGGAATGAACCCAAATCTGTGT +
Preference number: 2 (lower is better)
Translates to: PGRVENAPLPPACAA*VLYGADHGMNPNLC
Trigger: ACACAGATTTGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR-3UTR CCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR-3UTR TCA 90 bp CCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTCCATAGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: PGIVRQEPSCRYPFQFSIGAICS*PTSLQG
Trigger: TCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCC...TATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR-3UTR TCA 90 bp CCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCAGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 2 (lower is better)
Translates to: PPACAALVLYGADHGMNPASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...TGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR-3UTR CCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR-3UTR CCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR-3UTR TCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTGCCATAGTCTTAGGCTaGGGAGCCTTGAGAGTTGGT +
Preference number: 2 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVAIVLG*GALRVG
Trigger: ACCAACTCTCAAGGCTCCTCAGCCTAAGACTATGGC...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR-3UTR TCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTAGCCTAGGTCAGGCCTaGGTGTTTCTCATGAGCCAT +
Preference number: 2 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVSLGQA*VFLMSH
Trigger: ATGGCTCATGAGAAACACTCAGGCCTGACCTAGGCT...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR CAA 90 bp TTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: FTWLYPLNNMLNMSS*TPKPRSGLSVSHEP
Trigger: TGGCTCATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR-3UTR CCA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR-3UTR CCA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR-3UTR GCA 90 bp CAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATGTTCCTATGGCTCTGTaGATAGGGGCCATTTGTTCT +
Preference number: 2 (lower is better)
Translates to: QVVTKTPSTFTWLYPLNNVPMAL*IGAICS
Trigger: AGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC...ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR CCA 72 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: RSPGEAGLKVQA*HDHCPGKAPSS
Trigger: GGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
3UTR TCA 72 bp TCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGCCCCCAGTTCCTATGG +
Preference number: 3 (lower is better)
Translates to: SWGGRPKGPGLA*SLSREGPQFLW
Trigger: CCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
3UTR-3UTR CAA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 3 (lower is better)
Translates to: RVGSKESWGGRPKGPGLARGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
3UTR GCA 72 bp CCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTACGGAGCAGATCATGGA +
Preference number: 3 (lower is better)
Translates to: PGRVENAPLPPA*AALVLYGADHG
Trigger: TCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR TCA 72 bp GTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGGACCTTCAGGACTGTC +
Preference number: 3 (lower is better)
Translates to: VSSSLRRVGDPR*SRRMVWTFRTV
Trigger: GACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
3UTR TCA 72 bp GTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGATCTGGTGTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: VPMALCIGAICS*PTSLQGSGVGQ
Trigger: TTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
3UTR-3UTR CAA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 3 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFRGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR-3UTR CAA 90 bp CAGAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGACTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCA +
Preference number: 3 (lower is better)
Translates to: QKAVILDPGIVRQEPSCRLNMSS*TPKPRS
Trigger: TGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG...TCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR TCA 72 bp CTGTTCAGGAGTGTTCAAGTAGGGTCAGATGACCAGTaGTTGGGAATACTTCGTAAGCAGGAGCAAGTAAGA +
Preference number: 3 (lower is better)
Translates to: LFRSVQVGSDDQ*LGILRKQEQVR
Trigger: TCTTACTTGCTCCTGCTTACGAAGTATTCCCAATCACTGGTCATCTGACCCTACTTGAACACTCCTGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
3UTR-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACT +
Preference number: 3 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNVHRGH*FLTDFT
Trigger: AGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR GCA 72 bp ATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATaGAGATACCCTTTTCAGTTCTCCATACACCCATTC +
Preference number: 3 (lower is better)
Translates to: ILDPGIVRQEPS*RYPFQFSIHPF
Trigger: GAATGGGTGTATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR CCA 72 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTaGGCATACATGATGGTTACCCTAAAGAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: KQLQSHELLSPS*AYMMVTLKRKF
Trigger: AAACTTCCTCTTTAGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
3UTR CCA 72 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTaGCTTTACCCACTTAACAATATGCTCAATATGAGC +
Preference number: 3 (lower is better)
Translates to: SQVVTKTPSTFT*LYPLNNMLNMS
Trigger: GCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR TCA 72 bp ATGGTTAAATACTTAACAGGGCAATCACAGGGAAGATaGCTAGATTTCCTAACATCCATGAGTGAAATTTAT +
Preference number: 3 (lower is better)
Translates to: MVKYLTGQSQGR*LDFLTSMSEIY
Trigger: ATAAATTTCACTCATGGATGTTAGGAAATCTAGTCATCTTCCCTGTGATTGCCCTGTTAAGTATTTAACCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGGCATCTGGGGGTTGCTaGGCCAGCAGGGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVASGGC*ASRASG
Trigger: TCCGGAGGCCCTGCTGGCTCAGCAACCCCCAGATGC...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCATACGGTGGCCCAGTaGGGAGGCGAGTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHHTVAQ*GGESTD
Trigger: GTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATG...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLAGPGLA*SLSREG
Trigger: GCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACC...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR TCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPGPGLA*SLSREG
Trigger: GCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACC...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTCGGCGCCAGGGACGCTaGAGGGCCTCATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIRRQGR*RASWEL
Trigger: CAACTCCCATGAGGCCCTGCAGCGTCCCTGGCGCCG...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR GCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGAGGGACGCTACGTATaGAGCGCCTACGCCCGGACA +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHEGRYV*SAYART
Trigger: TGTCCGGGCGTAGGCGCTGCATACGTAGCGTCCCTC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR TCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLGPGLA*SLSREG
Trigger: GCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGGAGAGGCTTTCCTaGTCTGGAGGGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMALERLS*SGGSLL
Trigger: GAGGAGGCTCCCTCCAGAGCAGGAAAGCCTCTCCAG...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGAGAGCCGTATCCGCTaGAGGGGTGAGTTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKESRIR*RGELVG
Trigger: TCCCACTAACTCACCCCTGCAGCGGATACGGCTCTC...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp CCAGCTGCAGCCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCTGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PAAACPGRVENAPLPPACCPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...GCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGTCTTCTTCGGTTTGGTaGGGCTGCTCACCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKSSSVW*GCSPWG
Trigger: GCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGA...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCCAAGGCCCCAGAGCTaGAGCAGCCCAGGACCCGAA +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGPRPQS*SSPGPE
Trigger: TTCGGGTCCTGGGCTGCTCCAGCTCTGGGGCCTTGG...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCCAGCAGCTAGGTGTTaGTGGGGCCTGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHPAARC*WGLVGI
Trigger: GATGCCTACCAGGCCCCACCAACACCTAGCTGCTGG...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCAAGCTGCATACGGTaGCCCAGTGGGGAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLASSCIR*PSGEAS
Trigger: ACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGA...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATAGGCTCAGGTTCAGATaGGCTCTCACTTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHRLRFR*ALTWAL
Trigger: GAGGGCCCAAGTGAGAGCTCATCTGAACCTGAGCCT...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCATCCACCTGGACAGGCTaGTGGCTGCCGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPSTWTG*WLPDLL
Trigger: AAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGA...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGGAGAGCCGTATCCGCTaGAGGGGTGAGTTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVESRIR*RGELVG
Trigger: TCCCACTAACTCACCCCTGCAGCGGATACGGCTCTC...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGAGAGCCGTATCCGCTaGAGGGGTGAGTTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHESRIR*RGELVG
Trigger: TCCCACTAACTCACCCCTGCAGCGGATACGGCTCTC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCATGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPCPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGCGAACCAGCCCTGACTaGCCCCCAGATACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLRTSPD*PPDTSH
Trigger: ATGGCTGGTATCTGGGGGGCAGTCAGGGCTGGTTCG...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCGCTCGGCTTTCAAGCTaGATACGGTGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGARLSS*IRWPSG
Trigger: CCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGC...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACGTAAACACGTGTGCTTaGTCCGGAGTCGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHVNTCA*SGVGAG
Trigger: CCCGGCACCGACTCCGGACCAAGCACACGTGTTTAC...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR CCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTCTTCTTCGGTTTGGTaGGGCTGCTCACCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALSSSVW*GCSPWG
Trigger: GCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGA...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCTCAAGCTGCATACGGTaGCCCAGTGGGGAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGSSCIR*PSGEAS
Trigger: ACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGA...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATCAGTACTTTCCCGTCTaGGCAGGCCAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHQYFPV*AGQSQE
Trigger: CTCTTGGCTCTGGCCTGCTCAGACGGGAAAGTACTG...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCGCCAGGCTAAGGCACTaGCCACACTCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGARLRH*PHSEGS
Trigger: AGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGC...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTGCCAGGCTAAGGCACTaGCCACACTCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIARLRH*PHSEGS
Trigger: AGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGC...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTTATCCGCTGCAGGGGTaGGTTAGTGGGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMAYPLQG*VSGKVP
Trigger: TGGAACCTTCCCACTAACTCACCCCTGCAGCGGATA...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGAAGGTCCCAGAATTTaGTTTTCCGGTCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKEGPRI*FSGHSP
Trigger: CGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTC...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCGGACAGGCTGCTGGCTaGCGGATCTTCTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGAGQAAG*RIFFGL
Trigger: CAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCC...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGGACAGCTTTCTTGCTaGAAGGTCCCAAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLGQLSC*KVPRPQ
Trigger: CTGGGGCCTTGGGACCTTGCAGCAAGAAAGCTGTCC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGAGGGGTCTGTAGCTTaGATAGACCCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHEGSVA*IDPTCR
Trigger: TCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMAPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCTGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGACPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCACACATCCCAGCGCTCTaGATGTGCTGTGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPHIPAL*MCCDRA
Trigger: AGCTCGATCACAGCACATCCAGAGCGCTGGGATGTG...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCTTCCGAGGGGTGCCTaGAAGTTCCCATGCTCCACT +
Preference number: 4 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWLPRGA*KFPCST
Trigger: AGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAG...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCAGGCTTCACTGCATCTaGGGGTTGCTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGARLHCI*GLLSQQ
Trigger: CTGCTGGCTCAGCAACCCCCAGATGCAGTGAAGCCT...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCGCAGCTAGGTGTTGGTaGGGCCTGGTAGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFAARCW*GLVGIQ
Trigger: CTGGATGCCTACCAGGCCCCACCAACACCTAGCTGC...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCCCAGCAGCTAGGTGTTaGTGGGGCCTGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFPAARC*WGLVGI
Trigger: GATGCCTACCAGGCCCCACCAACACCTAGCTGCTGG...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCACGCACAGCCTGGTCATaGGCTAGGAAACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLARTAWS*ARKHWK
Trigger: CTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCG...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGAGGGTACGCACAGCCTaGTCATGGGCTAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVRVRTA*SWARKH
Trigger: GTGTTTCCTAGCCCATGACCAGGCTGTGCGTACCCT...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCAAGGCGATGGCTGGTTaGAGAGAAGCCAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGAKAMAG*REARPS
Trigger: AGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTT...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGTCCAAGGATCTGGTGTaGGCCAAGGCTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGSKDLV*AKAREW
Trigger: CCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGA...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCATTCACTCCAAGGATCTaGTGTGGGCCAAGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPFTPRI*CGPRLG
Trigger: CCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAA...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTTCACTCCAAGGATCTaGTGTGGGCCAAGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALFTPRI*CGPRLG
Trigger: CCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAA...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCACTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGGAGGGAGCCTCCTCTaGTCAGGAGAATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHGGSLL*SGESSN
Trigger: ATTTGAGGATTCTCCTGATCAGAGGAGGCTCCCTCC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAAGGCTCAGGTTCAGATaGGCTCTCACTTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIRLRFR*ALTWAL
Trigger: GAGGGCCCAAGTGAGAGCTCATCTGAACCTGAGCCT...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGTATCCGCTGCAGGGGTaGGTTAGTGGGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGYPLQG*VSGKVP
Trigger: TGGAACCTTCCCACTAACTCACCCCTGCAGCGGATA...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTATCCGCTGCAGGGGTaGGTTAGTGGGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLYPLQG*VSGKVP
Trigger: TGGAACCTTCCCACTAACTCACCCCTGCAGCGGATA...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATTAGCTTTGCACCATTaGAGGGTACGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLALALHH*RVRTAW
Trigger: CCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAA...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGAAGGTCCCAGAATTTaGTTTTCCGGTCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHEGPRI*FSGHSP
Trigger: CGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGAAGCCAGTCGGATCCTaGAAGACTCCAAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLKPVGS*KTPNGA
Trigger: GGCACCGTTTGGAGTCTTTCAGGATCCGACTGGCTT...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGVGDPR*SRRMVW
Trigger: CCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAAC...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHGAICS*PTSLQG
Trigger: TCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR TCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPGAICS*PTSLQG
Trigger: TCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCC...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR TCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGGCCATAGTCTTAGGCTaGGGAGCCTTGAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVAIVLG*GALRVG
Trigger: ACCAACTCTCAAGGCTCCTCAGCCTAAGACTATGGC...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTGCCATAGTCTTAGGCTaGGGAGCCTTGAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMAAIVLG*GALRVG
Trigger: ACCAACTCTCAAGGCTCCTCAGCCTAAGACTATGGC...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGGCCATAGTCTTAGGCTaGGGAGCCTTGAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALAIVLG*GALRVG
Trigger: ACCAACTCTCAAGGCTCCTCAGCCTAAGACTATGGC...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTAGCCAGGCCGTCTTATaGATAGCCTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAISQAVL*IASSCS
Trigger: GCTGCAGCTGGAGGCTATTCATAAGACGGCCTGGCT...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431028.5
CDS-3UTR TCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAAGAGGGGGAAAGTCTTaGGAGCACAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLARGGKS*EHRRGK
Trigger: CTTCCCTCTTCTGTGCTCTCAAGACTTTCCCCCTCT...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454704.5
CDS-3UTR GCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCTGGAAGTTCCCATaGTCCACTGGGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGAWKFP*STGAEL
Trigger: AAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGC...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATGCCTGGAAGTTCCCATaGTCCACTGGGGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHAWKFP*STGAEL
Trigger: AAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGC...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGAGGGGTCTGTAGCTTaGATAGACCCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLEGSVA*IDPTCR
Trigger: TCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGCTCGGCTTTCAAGCTaGATACGGTGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDARLSS*IRWPSG
Trigger: CCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCGCTGCAGGGCCTCATaGGAGTTGCAGTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVRCRAS*ELQCQK
Trigger: TTTTTGACACTGCAACTCCCATGAGGCCCTGCAGCG...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR CCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGGGTGGACAGAGGGTTaGATTGATCTAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKGWTEG*IDLRDQ
Trigger: CTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCC...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCGGATCTTCTTCGGTTTaGTGGGGCTGCTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGGSSSV*WGCSPW
Trigger: CCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCC...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGGATCTTCTTCGGTTTaGTGGGGCTGCTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLGSSSV*WGCSPW
Trigger: CCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGATTTGGTAAGCCATTaGGAGCCATTCCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKDLVSH*EPFLGS
Trigger: ACTGCCGAGGAATGGCTCCCAATGGCTTACCAAATC...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCAGGCTTCACTGCATCTaGGGGTTGCTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFRLHCI*GLLSQQ
Trigger: CTGCTGGCTCAGCAACCCCCAGATGCAGTGAAGCCT...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACCGCACAGCCTGGTCATaGGCTAGGAAACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHRTAWS*ARKHWK
Trigger: CTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCG...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGAGGGTACGCACAGCCTaGTCATGGGCTAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLRVRTA*SWARKH
Trigger: GTGTTTCCTAGCCCATGACCAGGCTGTGCGTACCCT...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAAAGGCGATGGCTGGTTaGAGAGAAGCCAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIKAMAG*REARPS
Trigger: AGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTT...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGCTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCCTCGAGGAAGAGGCTaGGACACAGCTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMAPRGRG*DTAERD
Trigger: ATCTCTTTCAGCTGTGTCCCAGCCTCTTCCTCGAGG...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGACAGAGGGTTGGATTaGTCTAAGAGACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHDRGLD*SKRPGT
Trigger: GGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGTTAGCTTTGCACCATTaGAGGGTACGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWLALHH*RVRTAW
Trigger: CCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAA...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCTGTCCTGAGCCACAGTaGCACCATTGTAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGCPEPQ*HHCREA
Trigger: TGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACA...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTAAGCCAGTCGGATCCTaGAAGACTCCAAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIKPVGS*KTPNGA
Trigger: GGCACCGTTTGGAGTCTTTCAGGATCCGACTGGCTT...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGCCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALPSGLS*YGIRSA
Trigger: AGCAGATCTGATACCGTATCAGGACAGTCCTGAAGG...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTTGAGAATGCCCCTCTCCCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ELRMPLSLLHAQHWFSTEVGDPR*SRRMVW
Trigger: CCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAAC...CTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGAGCCTAGGTCAGGCCTaGGTGTTTCTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGSLGQA*VFLMSH
Trigger: ATGGCTCATGAGAAACACTCAGGCCTGACCTAGGCT...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR GCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGGACAGGCTGCTGGCTaGCGGATCTTCTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDGQAAG*RIFFGL
Trigger: CAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCATGCATAGACCCCACCTaGAGAGTTGCCACACATTGT +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPCIDPT*RVATHC
Trigger: ACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCA...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTTGCATAGACCCCACCTaGAGAGTTGCCACACATTGT +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMACIDPT*RVATHC
Trigger: ACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCA...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCCCGGATATATCTCCTaGAGCTATTGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHPGYIS*SYCPKP
Trigger: TGGCTTGGGACAATAGCTGCAGGAGATATATCCGGG...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGTTCCTATGGCTCTGTaGATAGGGGCCATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKVPMAL*IGAICS
Trigger: AGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAAACAGGCAGCCAACTTaGCACGGGACAAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPNRQPT*HGTKGL
Trigger: TAGTCCTTTTGTCCCGTGGCAAGTTGGCTGCCTGTT...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCGGAGGATTAGGCTGTTaGGGCCTTTTGGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGAGGLGC*GLLGPF
Trigger: AAAAGGCCCCAAAAGGCCCCAACAGCCTAATCCTCC...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGGATTTGGTAAGCCATTaGGAGCCATTCCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALDLVSH*EPFLGS
Trigger: ACTGCCGAGGAATGGCTCCCAATGGCTTACCAAATC...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCAGCAGGGCCTCCGGATaGGGTAGACTGAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGSRASG*GRLNSS
Trigger: ACTGCTATTCAGTCTACCCCATCCGGAGGCCCTGCT...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGAGTCCACGGACAAAATaGATTCGAACCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVSPRTK*IRTSPD
Trigger: GTCAGGGCTGGTTCGAATCCATTTTGTCCGTGGACT...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGGTGGGGGAGGATGGTTaGAACATAGCATTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALVGEDG*NIALKW
Trigger: CCACTTCAATGCTATGTTCCAACCATCCTCCCCCAC...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCGGAGGGAGCCTCCTCTaGTCAGGAGAATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGGGSLL*SGESSN
Trigger: ATTTGAGGATTCTCCTGATCAGAGGAGGCTCCCTCC...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGCCTCTTTGGAGATTaGGATTCTGGCCGATCTAGG +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIGLFGD*DSGRSR
Trigger: CCTAGATCGGCCAGAATCTCAATCTCCAAAGAGGCC...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTGGTTTCTGTTTCCCTaGAGTAGATCCTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLWFLFP*SRSSWG
Trigger: ACCCCACGAGGATCTACTTCAGGGAAACAGAAACCA...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGACAGCTGAAAGAGATTaGCCCACAACCACTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLTAERD*PTTTLG
Trigger: CCCTAGAGTGGTTGTGGGTCAATCTCTTTCAGCTGT...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR GCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTTGGTCCGGAGTCGGTaGCGGGCTAGTTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAILVRSR*RASFLL
Trigger: TAAGAGAAAACTAGCCCGGCACCGACTCCGGACCAA...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR GCA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCACAGCAGCAGCAGCTCTaGCTTGGACTTTCGACCTCG +
Preference number: 4 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPQQQQL*LGLSTS
Trigger: CGAGGTCGAAAGTCCAAGGCAGAGCTGCTGCTGCTG...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGTTATTCGGTAGAGGGTaGCATCTTCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVLFGRG*HLQVAL
Trigger: AAGGGCTACCTGAAGATGGCACCCTCTACCGAATAA...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACCCAGCGCTCTGGATGTaGTGTGATCGAGCTAAATCT +
Preference number: 4 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHPALWM*CDRAKS
Trigger: AGATTTAGCTCGATCACAGCACATCCAGAGCGCTGG...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGTGCATAGACCCCACCTaGAGAGTTGCCACACATTGT +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGCIDPT*RVATHC
Trigger: ACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCA...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATCCCGGATATATCTCCTaGAGCTATTGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHPGYIS*SYCPKP
Trigger: TGGCTTGGGACAATAGCTGCAGGAGATATATCCGGG...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCTATGGCAGGCTTCACTaGATCTGTGGCAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGYGRLH*ICGSKR
Trigger: CCTCTTGCTGCCACAGATGCAGTGAAGCCTGCCATA...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454704.5
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCCGGAAGCCTCTGCACTaGTCATTTCTGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGARKPLH*SFLKRS
Trigger: AGACCTCTTCAGAAATGACCAGTGCAGAGGCTTCCG...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCGGAGGATTAGGCTGTTaGGGCCTTTTGGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGGGLGC*GLLGPF
Trigger: AAAAGGCCCCAAAAGGCCCCAACAGCCTAATCCTCC...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCGCAGCAGCTCTGCCTTaGACTTTCGACCTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGAAALP*TFDLVS
Trigger: AGAAACGAGGTCGAAAGTCCAAGGCAGAGCTGCTGC...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCAAAGTCTTCATCCCGTaGAGCACCATCCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGAKVFIP*STIHLF
Trigger: GAAGAGGTGGATGGTGCTCCACGGGATGAAGACTTT...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAAAGTCCTTGGTGAGATaGAGGCACTTCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPKSLVR*RHFQTG
Trigger: TCCTGTTTGGAAGTGCCTCCATCTCACCAAGGACTT...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGCTTCACTGCATCTGTaGCAGCAAGAGGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIASLHL*QQEGES
Trigger: ACTTTCCCCCTCTTGCTGCCACAGATGCAGTGAAGC...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454704.5
CDS-3UTR TCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGAAGGTCCCAGAATTTaGTTTTCCGGTCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDEGPRI*FSGHSP
Trigger: CGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGCTCTACAGGTCGCTTaGCATTTATTGGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHALQVA*HLLDSV
Trigger: CACTGAATCCAATAAATGTCAAGCGACCTGTAGAGC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTCGAAATCTTGTTAGCTaGTCTTCACTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIRNLVS*SSLTPP
Trigger: TGGGGGCGTCAGTGAAGAGCAGCTAACAAGATTTCG...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR GCA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGCAGTATGAATGTTTCTaGTCTCGGAAGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SRPGMITVQGRPPVPMALQYECF*SRKSLV
Trigger: CACCAAGGACTTCCGAGAGCAGAAACATTCATACTG...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGTTATTCGGTAGAGGGTaGCATCTTCAGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWLFGRG*HLQVAL
Trigger: AAGGGCTACCTGAAGATGGCACCCTCTACCGAATAA...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATCCCCACCTGCAGAGTTaGCACACATTGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHPHLQS*HTLYLI
Trigger: TATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGG...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATTTACGCCAATGGCGTTaGAGCGCGCGGGGCACAACC +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHLRQWR*SARGTT
Trigger: GGTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAA...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGTGGACAGAGGGTTaGATTGATCTAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIGWTEG*IDLRDQ
Trigger: CTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCC...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATGAAGCTGGCTCAGTaGGTGTGTCTCATTCATGTC +
Preference number: 4 (lower is better)
Translates to: MITVQGRPPVPMALCIGAMKLAQ*VCLIHV
Trigger: GACATGAATGAGACACACCCACTGAGCCAGCTTCAT...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTCCAAGGCCCCAGAGCTaGAGCAGCCCAGGACCCGAA +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPPRPQS*SSPGPE
Trigger: TTCGGGTCCTGGGCTGCTCCAGCTCTGGGGCCTTGG...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVLRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAATAGGAGTCCAGGTTTaGGCTGAAACGTACCTTATG +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLAIGVQV*AETYLM
Trigger: CATAAGGTACGTTTCAGCCCAAACCTGGACTCCTAT...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTCATACGGTGGCCCAGTaGGGAGGCGAGTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPHTVAQ*GGESTD
Trigger: GTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATG...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGAACATAGCATTGAAGTaGGCTCGGCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGNIALK*ARLSSC
Trigger: GCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTT...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGAACATAGCATTGAAGTaGGCTCGGCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWNIALK*ARLSSC
Trigger: GCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTT...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCACTAAAGGTCCAGGCCTaGCATGATCACTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPLKVQA*HDHCPG
Trigger: CCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAG...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGTCGGTAGGGTGTCTGTaGTATTCCTTGGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVSVGCL*YSLVKE
Trigger: TTCTTTGACCAAGGAATACCACAGACACCCTACCGA...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCACAGGGAAACACAACTaGCCCTTGGTTACGCCAATG +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGTGKHN*PLVTPM
Trigger: CATTGGCGTAACCAAGGGCCAGTTGTGTTTCCCTGT...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
3UTR CAA 72 bp GCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACTCCAAGGATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: APSSYGSVHRGH*FLTDFTPRIWC
Trigger: ACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
3UTR CAA 72 bp GTTGAGAATGCCCCTCTCCCTCCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGATCATGGAATGAACCCA +
Preference number: 4 (lower is better)
Translates to: VENAPLPPACAA*VLYGADHGMNP
Trigger: TGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACCTGGTCGCGGTCTTATaGCGAAATCTTGTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDLVAVL*RNLVSC
Trigger: GCAGCTAACAAGATTTCGTCATAAGACCGCGACCAG...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR TCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATCTGGGGGTTGCTaGGCCAGCAGGGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWASGGC*ASRASG
Trigger: TCCGGAGGCCCTGCTGGCTCAGCAACCCCCAGATGC...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCTGTCCTGAGCCACAGTaGCACCATTGTAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VMVDSFSVSSSLRRVGDPCPEPQ*HHCREA
Trigger: TGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACA...GGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATGCTCTACAGGTCGCTTaGCATTTATTGGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHALQVA*HLLDSV
Trigger: CACTGAATCCAATAAATGTCAAGCGACCTGTAGAGC...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLAASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATACCCCACCTGCAGAGTTaGCACACATTGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIPHLQS*HTLYLI
Trigger: TATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGG...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR GCA 90 bp ATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGACCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: MVDSFSVSSSLRRVGDPRPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...TCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR GCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATCGAACCAGCCCTGACTaGCCCCCAGATACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHRTSPD*PPDTSH
Trigger: ATGGCTGGTATCTGGGGGGCAGTCAGGGCTGGTTCG...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTGTTCCTATGGCTCTGTaGATAGGGGCCATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIVPMAL*IGAICS
Trigger: AGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATTCATGTCAGGGCTaGAGAAAAGAGCCACATATT +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVHSCQG*RKEPHI
Trigger: AATATGTGGCTCTTTTCTCCAGCCCTGACATGAATG...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGCTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: GMITVQGRPPVPMALCIGLRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CCA 90 bp CCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCACTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: PPACAALVLYGADHGMNPLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...TGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTCATACGGTGGCCCAGTaGGGAGGCGAGTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVHTVAQ*GGESTD
Trigger: GTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATG...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATTCAAGCTGCATACGGTaGCCCAGTGGGGAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHSSCIR*PSGEAS
Trigger: ACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGA...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTAACATAGCATTGAAGTaGGCTCGGCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ITVQGRPPVPMALCIGAINIALK*ARLSSC
Trigger: GCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTT...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGACACCCATTCACAAGTaGTCACAAAAACACCCAGTA +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVTPIHK*SQKHPV
Trigger: TACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR CAA 72 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGGATCTGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLF*TDFTPRIWCGP
Trigger: TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCTCCAAACAGGAGCCATaGTATGATTTGGTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGSKQEP*YDLVSH
Trigger: ATGGCTTACCAAATCATATCATGGCTCCTGTTTGGA...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CAGAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGAAGCCCAGGACCCGAATaGAGCTGGCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QKAVILDPGIVRQEPSCRSPGPE*SWLSGC
Trigger: ACACCCACTGAGCCAGCTTCATTCGGGTCCTGGGCT...TCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTCCCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAATTAGCTTTGCACCATTaGAGGGTACGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPSCMRSIGSLRSRSWNELALHH*RVRTAW
Trigger: CCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAA...TTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp GGACCCCAGATGAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTGATACGCCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GPQMKQKNGLDLQDCPDTPSGLS*YGIRSA
Trigger: AGCAGATCTGATACCGTATCAGGACAGTCCTGAAGG...CGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR GCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTCGGTTTGGTGGGGCTaGTCACCTTGGGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYSVWWG*SPWGPQ
Trigger: CTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGA...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATGGACAGCTTTCTTGCTaGAAGGTCCCAAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHGQLSC*KVPRPQ
Trigger: CTGGGGCCTTGGGACCTTGCAGCAAGAAAGCTGTCC...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTACAGAAGTGCCACTTaGGCAGCCCTTCGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVYRSAT*AALRRG
Trigger: ACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTA...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACCTCTTCTCCACCTaGACAGGCTGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTHLFST*TGCWLP
Trigger: CGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTG...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCAAAAGTCTTCATCCCGTaGAGCACCATCCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPKVFIP*STIHLF
Trigger: GAAGAGGTGGATGGTGCTCCACGGGATGAAGACTTT...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCTTGTACAGAAAACAATaGAGACTTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGLYRKQ*RLLLLG
Trigger: CCCCAGGAGGAGAAGTCTCCATTGTTTTCTGTACAA...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCACACATCCCAGCGCTCTaGATGTGCTGTGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPHIPAL*MCCDRA
Trigger: AGCTCGATCACAGCACATCCAGAGCGCTGGGATGTG...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGCATTCATGTCAGGGCTaGAGAAAAGAGCCACATATT +
Preference number: 4 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLHSCQG*RKEPHI
Trigger: AATATGTGGCTCTTTTCTCCAGCCCTGACATGAATG...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATATTGTACCTTATATATaGCAGGCTTCACTGCATCTG +
Preference number: 4 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHIVPYI*QASLHL
Trigger: CAGATGCAGTGAAGCCTGCCATATATAAGGTACAAT...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTATTGTACCTTATATATaGCAGGCTTCACTGCATCTG +
Preference number: 4 (lower is better)
Translates to: RSRPGMITVQGRPPVPMAIVPYI*QASLHL
Trigger: CAGATGCAGTGAAGCCTGCCATATATAAGGTACAAT...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGAGCAGCTAGGTGTTGGTaGGGCCTGGTAGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QKAVILDPGIVRQEPSCRAARCW*GLVGIQ
Trigger: CTGGATGCCTACCAGGCCCCACCAACACCTAGCTGC...TCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCGCACAGCCTGGTCATaGGCTAGGAAACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: VVMVDSFSVSSSLRRVGDRTAWS*ARKHWK
Trigger: CTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCG...GTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGCAGAGACAAGGAAATaGCTGTTAGCTTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: PGMITVQGRPPVPMALCIAETRK*LLALHH
Trigger: ATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGC...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGTCGCTTGACATTTATTaGATTCAGTGCCATATCTGG +
Preference number: 4 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVSLDIY*IQCHIW
Trigger: CCAGATATGGCACTGAATCCAATAAATGTCAAGCGA...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCATAGGAGTCCAGGTTTaGGCTGAAACGTACCTTATG +
Preference number: 4 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFIGVQV*AETYLM
Trigger: CATAAGGTACGTTTCAGCCCAAACCTGGACTCCTAT...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATTCCAAGGATCTGGTGTaGGCCAAGGCTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHSKDLV*AKAREW
Trigger: CCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGA...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCACCCAGTACCTTTACTTaGCTTTACCCACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: RVGSKESWGGRPKGPGLAPSTFT*LYPLNN
Trigger: ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGG...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGACACCCATTCACAAGTaGTCACAAAAACACCCAGTA +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLTPIHK*SQKHPV
Trigger: TACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp GTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACGAAGGTCCCAGAATTTaGTTTTCCGGTCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: VVMVDSFSVSSSLRRVGDEGPRI*FSGHSP
Trigger: CGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTC...GTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGCTCTACAGGTCGCTTaGCATTTATTGGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDALQVA*HLLDSV
Trigger: CACTGAATCCAATAAATGTCAAGCGACCTGTAGAGC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR TCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGGTCCAGGCCTGGCATaGTCACTGTCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWGPGLA*SLSREG
Trigger: GCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACC...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCAATCACAGGGAAGATaGCTAGATTTCCTAACATCC +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGQSQGR*LDFLTS
Trigger: GGATGTTAGGAAATCTAGTCATCTTCCCTGTGATTG...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACATATTGCGAGGCTCCTaGCCCCTCTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYILRGS*PLWHWA
Trigger: TGCCCAGTGCCAGAGGGGGCAGGAGCCTCGCAATAT...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTGAGCCTTCCGAGGGGTaGCTGGAAGTTCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVEPSEG*LEVPML
Trigger: GAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTC...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTTGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPCPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGCACCTCTTCTCCACCTaGACAGGCTGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWHLFST*TGCWLP
Trigger: CGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTG...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCCAGCAGCTAGGTGTTaGTGGGGCCTGGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTPAARC*WGLVGI
Trigger: GATGCCTACCAGGCCCCACCAACACCTAGCTGCTGG...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCTCGCTTGACATTTATTaGATTCAGTGCCATATCTGG +
Preference number: 4 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGSLDIY*IQCHIW
Trigger: CCAGATATGGCACTGAATCCAATAAATGTCAAGCGA...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGCCCAGTACCTTTACTTaGCTTTACCCACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLPSTFT*LYPLNN
Trigger: ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGG...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCAGTAATATTGGATCCTaGAATAGTCAGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VERVGSKESWGGRPKGPGSNIGS*NSQTGA
Trigger: GGCTCCTGTCTGACTATTCCAGGATCCAATATTACT...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCTTGGTTACGCCAATaGCGTTGCAGCGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPWLRQ*RCSARG
Trigger: GCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGAATTTGGGAGGGCATGTaGGTTAGGATCCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: MVDSFSVSSSLRRVGDPRIWEGM*VRIQQL
Trigger: CAGCTGTTGGATCCTAACCCACATGCCCTCCCAAAT...TCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCATGCACTGGTCATTTCTaGAGAGGTCTTGACATCAAG +
Preference number: 4 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPCTGHF*RGLDIK
Trigger: CTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCA...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCAGGAACCAGTGGGGCTaGTGGAGGATTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFRNQWG*WRIRLL
Trigger: CAACAGCCTAATCCTCCATCAGCCCCACTGGTTCCT...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTGGCAGGCAGGGCTGTTaGGAGCTCTTCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLGRQGC*ELFSQF
Trigger: GAACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCC...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTAGCCCAGGACCCGAATaGAGCTGGCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRSPGPE*SWLSGC
Trigger: ACACCCACTGAGCCAGCTTCATTCGGGTCCTGGGCT...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTCACTGGGGCAGAACTTaGGGTCCCAGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRHWGRT*GPRCSR
Trigger: ACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTG...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCAGTACTTTCCCGTCTaGGCAGGCCAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTQYFPV*AGQSQE
Trigger: CTCTTGGCTCTGGCCTGCTCAGACGGGAAAGTACTG...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GAGCAAGTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTAAGCCAGTCGGATCCTaGAAGACTCCAAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: EQVVMVDSFSVSSSLRRVKPVGS*KTPNGA
Trigger: GGCACCGTTTGGAGTCTTTCAGGATCCGACTGGCTT...AACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp GGACCCCAGATGAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTGATACGGCTCTACAGGTCGCTTaGCATTTATTGGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: GPQMKQKNGLDLQDCPDTALQVA*HLLDSV
Trigger: CACTGAATCCAATAAATGTCAAGCGACCTGTAGAGC...CGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPVGDPR*SRRMVW
Trigger: CCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAAC...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VMVDSFSVSSSLRRVGDPEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...GGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTCGGTTTGGTGGGGCTaGTCACCTTGGGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNSVWWG*SPWGPQ
Trigger: CTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACATATTGCGAGGCTCCTaGCCCCTCTGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNILRGS*PLWHWA
Trigger: TGCCCAGTGCCAGAGGGGGCAGGAGCCTCGCAATAT...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCGGATATATCTCCTaGAGCTATTGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: VVMVDSFSVSSSLRRVGDPGYIS*SYCPKP
Trigger: TGGCTTGGGACAATAGCTGCAGGAGATATATCCGGG...GTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR GCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTTGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVCPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTCGAACCAGCCCTGACTaGCCCCCAGATACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLRTSPD*PPDTSH
Trigger: ATGGCTGGTATCTGGGGGGCAGTCAGGGCTGGTTCG...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCTCGGCTTTCAAGCTaGATACGGTGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWARLSS*IRWPSG
Trigger: CCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGC...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTGAGGCTTTCCTGCTCTaGAGGGAGCCTCCTCTGATC +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVEAFLL*REPPLI
Trigger: GATCAGAGGAGGCTCCCTCCAGAGCAGGAAAGCCTC...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATAGAGGCTTTCCTGCTCTaGAGGGAGCCTCCTCTGATC +
Preference number: 4 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQIEAFLL*REPPLI
Trigger: GATCAGAGGAGGCTCCCTCCAGAGCAGGAAAGCCTC...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTTACAGAAGTGCCACTTaGGCAGCCCTTCGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLYRSAT*AALRRG
Trigger: ACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTA...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACTTCCGAGGGGTGCCTaGAAGTTCCCATGCTCCACT +
Preference number: 4 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQILPRGA*KFPCST
Trigger: AGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAG...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCAGCTAGGTGTTGGTaGGGCCTGGTAGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWAARCW*GLVGIQ
Trigger: CTGGATGCCTACCAGGCCCCACCAACACCTAGCTGC...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAGCAAGTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTAGGGTACGCACAGCCTaGTCATGGGCTAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: EQVVMVDSFSVSSSLRRVRVRTA*SWARKH
Trigger: GTGTTTCCTAGCCCATGACCAGGCTGTGCGTACCCT...AACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp GTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCCTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: VMVDSFSVSSSLRRVGDPLRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...GGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCTCCAAGGATCTGGTGTaGGCCAAGGCTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTSKDLV*AKAREW
Trigger: CCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGA...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTTTCACTCCAAGGATCTaGTGTGGGCCAAGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPFTPRI*CGPRLG
Trigger: CCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAA...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTCTCGGAAGTCCTTGGTaGGATGGAGGCACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVLGSPW*DGGTSK
Trigger: TTTGGAAGTGCCTCCATCTCACCAAGGACTTCCGAG...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCACTGGGGCAGAACTTaGGGTCCCAGATGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMHWGRT*GPRCSR
Trigger: ACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTG...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGGCCAGGCTAAGGCACTaGCCACACTCAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKARLRH*PHSEGS
Trigger: AGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGC...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTGTCCTGAGCCACAGTaGCACCATTGTAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFCPEPQ*HHCREA
Trigger: TGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACA...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTAGCCTAGGTCAGGCCTaGGTGTTTCTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVSLGQA*VFLMSH
Trigger: ATGGCTCATGAGAAACACTCAGGCCTGACCTAGGCT...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGAGCCTTCCGAGGGGTaGCTGGAAGTTCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNEPSEG*LEVPML
Trigger: GAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTTCTCCCCTAGCCTGTaGGGGAGAGGAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICFSPSL*GRGALV
Trigger: AACCAGGGCTCCTCTCCCGCACAGGCTAGGGGAGAA...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCTCAGGGGGCCTCTTTaGAGATTGAGATTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTLRGPL*RLRFWP
Trigger: CGGCCAGAATCTCAATCTCCAAAGAGGCCCCCTGAG...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTCTCAGGGGGCCTCTTTaGAGATTGAGATTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVLRGPL*RLRFWP
Trigger: CGGCCAGAATCTCAATCTCCAAAGAGGCCCCCTGAG...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCACCTGGACAGGCTGCTaGCTGCCGGATCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICTWTGC*LPDLLR
Trigger: CCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGT...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGAGCAGAGACAAGGAAATaGCTGTTAGCTTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: MVDSFSVSSSLRRVGDPRAETRK*LLALHH
Trigger: ATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGC...TCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTCTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTTCCAAGGATCTGGTGTaGGCCAAGGCTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLSKDLV*AKAREW
Trigger: CCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGA...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGTCTGTGGTATTCCTTaGTCAAAGAAGTACTCTAAG +
Preference number: 4 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDVCGIP*SKKYSK
Trigger: CTTAGAGTACTTCTTTGACCAAGGAATACCACAGAC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCGACAGAGGGTTGGATTaGTCTAAGAGACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFDRGLD*SKRPGT
Trigger: GGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTC...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCGGCCTCTTTGGAGATTaGGATTCTGGCCGATCTAGG +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTGLFGD*DSGRSR
Trigger: CCTAGATCGGCCAGAATCTCAATCTCCAAAGAGGCC...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTCAAGGTAAACACGTGTaGTTGGTCCGGAGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRQGKHV*LVRSRC
Trigger: GCACCGACTCCGGACCAAGCACACGTGTTTACCTTG...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR GCA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGCTCAGATAACAAGTaGCACTTCCAGGCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPSSDNK*HFQAKG
Trigger: TCCTTTAGCCTGGAAGTGGCACTTGTTATCTGAGCT...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTCCAGCGCTCTGGATGTaGTGTGATCGAGCTAAATCT +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPPALWM*CDRAKS
Trigger: AGATTTAGCTCGATCACAGCACATCCAGAGCGCTGG...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCAGGACAGCTTTCTTaGTGCAAGGTCCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPGQLS*CKVPRP
Trigger: GGGCCTTGGGACCTTGCAGCAAGAAAGCTGTCCTGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCAGGACAGCTTTCTTaGTGCAAGGTCCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKPGQLS*CKVPRP
Trigger: GGGCCTTGGGACCTTGCAGCAAGAAAGCTGTCCTGG...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTCCCGGATATATCTCCTaGAGCTATTGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPPGYIS*SYCPKP
Trigger: TGGCTTGGGACAATAGCTGCAGGAGATATATCCGGG...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTGCCCCTCTCCCTCCTaGATGCGCAGCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNCPSPS*MRSIGS
Trigger: AGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACCGCACAGCCTGGTCATaGGCTAGGAAACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNRTAWS*ARKHWK
Trigger: CTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCG...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCTCGCTTGACATTTATTaGATTCAGTGCCATATCTGG +
Preference number: 4 (lower is better)
Translates to: VMVDSFSVSSSLRRVGDPSLDIY*IQCHIW
Trigger: CCAGATATGGCACTGAATCCAATAAATGTCAAGCGA...GGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp CCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTCCATAGTGGGGGAGGATGGTTaGAACATAGCATTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGIVRQEPSCRYPFQFSIVGEDG*NIALKW
Trigger: CCACTTCAATGCTATGTTCCAACCATCCTCCCCCAC...TATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGAAGGCGATGGCTGGTTaGAGAGAAGCCAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMKAMAG*REARPS
Trigger: AGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTT...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATAGGAACCAGTGGGGCTaGTGGAGGATTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNRNQWG*WRIRLL
Trigger: CAACAGCCTAATCCTCCATCAGCCCCACTGGTTCCT...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTTCTTCAGCCAGTTCCTaGAGATACAGAAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPSSASS*RYRSAT
Trigger: AGTGGCACTTCTGTATCTTCAGGAACTGGCTGAAGA...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGGGCAGGCAGGGCTGTTaGGAGCTCTTCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLGRQGC*ELFSQF
Trigger: GAACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCC...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTTGGTTTCTGTTTCCCTaGAGTAGATCCTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVWFLFP*SRSSWG
Trigger: ACCCCACGAGGATCTACTTCAGGGAAACAGAAACCA...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATAAGCCAGTCGGATCCTaGAAGACTCCAAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNKPVGS*KTPNGA
Trigger: GGCACCGTTTGGAGTCTTTCAGGATCCGACTGGCTT...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICVGDPR*SRRMVW
Trigger: CCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAAC...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGTTGGGGACCCCAGATaGAGCAGAAGAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNVGDPR*SRRMVW
Trigger: CCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAAC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAGCCTAGGTCAGGCCTaGGTGTTTCTCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNSLGQA*VFLMSH
Trigger: ATGGCTCATGAGAAACACTCAGGCCTGACCTAGGCT...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR GCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAAAAGAGCCACATATTaGGAGGCTCCTGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNKRATY*EAPAPS
Trigger: AGAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTT...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAAAAGAGCCACATATTaGGAGGCTCCTGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLKRATY*EAPAPS
Trigger: AGAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTT...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCTCTCCCTCCTGCATaGGCAGCATTGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPLPPA*AALVLY
Trigger: GTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR GCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATACTAGGGGCCATCACCTaGCCTTCTTCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSILGAIT*PSSVLG
Trigger: GCCCAGGACTGAAGAAGGGCAGGTGATGGCCCCTAG...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CCA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATACCTGGACAGGCTGCTaGCTGCCGGATCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNTWTGC*LPDLLR
Trigger: CCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGT...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTATGAAGCTGGCTCAGTaGGTGTGTCTCATTCATGTC +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVMKLAQ*VCLIHV
Trigger: GACATGAATGAGACACACCCACTGAGCCAGCTTCAT...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GAGCAAGTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: EQVVMVDSFSVSSSLRRVDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...AACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTACTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACCTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATTTACTATCACCCTCGTaGGCATACATGATGGTTACC +
Preference number: 4 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHLLSPS*AYMMVT
Trigger: GGTAACCATCATGTATGCCCACGAGGGTGATAGTAA...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTCCATAGTCTTGACATCAAGCTaGTTTAGCACCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGIVRQEPSCRYPFQFSIVLTSS*FSTSCP
Trigger: TGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGAC...TATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACTCGGAAGTCCTTGGTaGGATGGAGGCACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALLGSPW*DGGTSK
Trigger: TTTGGAAGTGCCTCCATCTCACCAAGGACTTCCGAG...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTTAGCTTTGCACCATTaGAGGGTACGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICLALHH*RVRTAW
Trigger: CCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAA...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTAGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALGAICS*PTSLQG
Trigger: TCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCC...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGATCCCTCCAACAAAGTaGGTTGCCTCCGACGGAGTT +
Preference number: 4 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKIPPTK*VASDGV
Trigger: AACTCCGTCGGAGGCAACTCACTTTGTTGGAGGGAT...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR GCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATCCACCTGGACAGGCTaGTGGCTGCCGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSISTWTG*WLPDLL
Trigger: AAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGA...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCAAAGTGGGCCCTGTTaGCAGGACAGCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMQSGPC*QDSFLA
Trigger: AGCAAGAAAGCTGTCCTGGCAACAGGGCCCACTTTG...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGATGGCGCCGCCTGTCTaGTCGCGGTCTTATGACGAA +
Preference number: 4 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLMAPPV*SRSYDE
Trigger: TTCGTCATAAGACCGCGACCAGACAGGCGGCGCCAT...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR CCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCGCAGCAGCTCTGCCTTaGACTTTCGACCTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICAAALP*TFDLVS
Trigger: AGAAACGAGGTCGAAAGTCCAAGGCAGAGCTGCTGC...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCAAGTCCTTGGTGAGATaGAGGCACTTCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTKSLVR*RHFQTG
Trigger: TCCTGTTTGGAAGTGCCTCCATCTCACCAAGGACTT...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTTTGTACAGAAAACAATaGAGACTTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSVSRITITLVGIHDGYPLYRKQ*RLLLLG
Trigger: CCCCAGGAGGAGAAGTCTCCATTGTTTTCTGTACAA...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTCCATACTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: PGIVRQEPSCRYPFQFSILRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...TATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTCTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVLRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCTGCATGCGCAGCATTaGTTCTCTACGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNLHAQH*FSTEQI
Trigger: GATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAAGGCGATGGCTGGTTaGAGAGAAGCCAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNKAMAG*REARPS
Trigger: AGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTT...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CCA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCACCCAGTACCTTTACTTaGCTTTACCCACTTAACAAT +
Preference number: 4 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPPSTFT*LYPLNN
Trigger: ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGG...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATAACAGGAGCCATGATATaGTTTGGTAAGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQITGAMI*FGKPLG
Trigger: TCCCAATGGCTTACCAAATCATATCATGGCTCCTGT...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALPSGLS*YGIRSA
Trigger: AGCAGATCTGATACCGTATCAGGACAGTCCTGAAGG...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPSGLS*YGIRSA
Trigger: AGCAGATCTGATACCGTATCAGGACAGTCCTGAAGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAGGGGCCATTTGTTCTTaGCCGACTTCACTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SQKHPVPLLGFTHLTICSGAICS*PTSLQG
Trigger: TCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCC...TGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACGGGTCAGATGACCAGTaGTTGGGAATACTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNGSDDQ*LGILRK
Trigger: CTTACGAAGTATTCCCAATCACTGGTCATCTGACCC...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACAGTATGAATGTTTCTaGTCTCGGAAGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQIQYECF*SRKSLV
Trigger: CACCAAGGACTTCCGAGAGCAGAAACATTCATACTG...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTCCCCACCTGCAGAGTTaGCACACATTGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: VLHTPIHKWSQKHPVPLLPHLQS*HTLYLI
Trigger: TATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGG...AAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGGAGGGGTCTGTAGCTTaGATAGACCCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLEGSVA*IDPTCR
Trigger: TCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTC...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCCGGATATATCTCCTaGAGCTATTGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPGYIS*SYCPKP
Trigger: TGGCTTGGGACAATAGCTGCAGGAGATATATCCGGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGTGGGGGAGGATGGTTaGAACATAGCATTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNVGEDG*NIALKW
Trigger: CCACTTCAATGCTATGTTCCAACCATCCTCCCCCAC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAGGATCTAAGGAGTCCTaGGGAGGCAGGCCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSIGSKES*GGRPKG
Trigger: ACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCC...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
3UTR CAA 72 bp CTTTACCCACTTAACAATATGCTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LYPLNNMLNMSS*TPKPRSGLSVS
Trigger: AGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp TGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTTGCACTGGTCATTTCTaGAGAGGTCTTGACATCAAG +
Preference number: 4 (lower is better)
Translates to: WLYPLNNMLNMSSLTPKPCTGHF*RGLDIK
Trigger: CTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCA...AGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGTCTTCAGCCAGTTCCTaGAGATACAGAAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMSSASS*RYRSAT
Trigger: AGTGGCACTTCTGTATCTTCAGGAACTGGCTGAAGA...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTCCAAACAGGAGCCATaGTATGATTTGGTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYSKQEP*YDLVSH
Trigger: ATGGCTTACCAAATCATATCATGGCTCCTGTTTGGA...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATTGTCCTGAGCCACAGTaGCACCATTGTAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNCPEPQ*HHCREA
Trigger: TGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACA...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SQKHPVPLLGFTHLTICSPSGLS*YGIRSA
Trigger: AGCAGATCTGATACCGTATCAGGACAGTCCTGAAGG...TGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCGGAGCAAGTAAGATCTaGGCCACTGTTCTATCGGTA +
Preference number: 4 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICGASKI*ATVLSV
Trigger: TACCGATAGAACAGTGGCTCAGATCTTACTTGCTCC...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGGAGCAAGTAAGATCTaGGCCACTGTTCTATCGGTA +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNGASKI*ATVLSV
Trigger: TACCGATAGAACAGTGGCTCAGATCTTACTTGCTCC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTAGGGTCAGATGACCAGTaGTTGGGAATACTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALGSDDQ*LGILRK
Trigger: CTTACGAAGTATTCCCAATCACTGGTCATCTGACCC...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGGGTCAGATGACCAGTaGTTGGGAATACTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNGSDDQ*LGILRK
Trigger: CTTACGAAGTATTCCCAATCACTGGTCATCTGACCC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTTCAAGTAGGGTCAGATaGCCAGTGATTGGGAATACT +
Preference number: 4 (lower is better)
Translates to: WLYPLNNMLNMSSLTPKPSSRVR*PVIGNT
Trigger: AGTATTCCCAATCACTGGTCATCTGACCCTACTTGA...AGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATACAAAGTGGGCCCTGTTaGCAGGACAGCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSIQSGPC*QDSFLA
Trigger: AGCAAGAAAGCTGTCCTGGCAACAGGGCCCACTTTG...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp TCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAGACAGGAGCCTTCATaGAGATACCCTTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SQVVTKTPSTFTWLYPLNRQEPS*RYPFQF
Trigger: GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCT...GTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTAGACAGGAGCCTTCATaGAGATACCCTTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRRQEPS*RYPFQF
Trigger: GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCT...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp GTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTATAGGAGTCCAGGTTTaGGCTGAAACGTACCTTATG +
Preference number: 4 (lower is better)
Translates to: VLHTPIHKWSQKHPVPLLIGVQV*AETYLM
Trigger: CATAAGGTACGTTTCAGCCCAAACCTGGACTCCTAT...AAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAAGTCCACGGACAAAATaGATTCGAACCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SQKHPVPLLGFTHLTICSSPRTK*IRTSPD
Trigger: GTCAGGGCTGGTTCGAATCCATTTTGTCCGTGGACT...TGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTTCGGTAGGGTGTCTGTaGTATTCCTTGGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRSVGCL*YSLVKE
Trigger: TTCTTTGACCAAGGAATACCACAGACACCCTACCGA...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAAACACAACTGGCCCTTaGTTACGCCAATGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSINTTGP*LRQWRC
Trigger: GCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTT...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR TCA 90 bp CAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATGTCTTGACATCAAGCTaGTTTAGCACCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVVTKTPSTFTWLYPLNNVLTSS*FSTSCP
Trigger: TGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGAC...ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp ACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCTTTCTGAAGAGGTCTTaGCATCAAGCTGATTTAGCA +
Preference number: 4 (lower is better)
Translates to: TPIHKWSQKHPVPLLGFTFLKRS*HQADLA
Trigger: TGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAA...GGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATACAGGAGCCATGATATaGTTTGGTAAGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: QVVTKTPSTFTWLYPLNNTGAMI*FGKPLG
Trigger: TCCCAATGGCTTACCAAATCATATCATGGCTCCTGT...ATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGCTCTACAGGTCGCTTaGCATTTATTGGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNALQVA*HLLDSV
Trigger: CACTGAATCCAATAAATGTCAAGCGACCTGTAGAGC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp GGAGCAGATCATGGAATGAACCCAAATCTGTGTCTTGAAAGAGCAAGTAGTGATGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: GADHGMNPNLCLERASSDASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...ATCACTACTTGCTCTTTCAAGACACAGATTTGGGTTCATTCCATGATCTGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGAGCAGATCATGGAATaGACCCAAATCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNEQIME*TQICVL
Trigger: CAAGACACAGATTTGGGTTCATTCCATGATCTGCTC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTCAAGTAGGGTCAGATaGCCAGTGATTGGGAATACT +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNSSRVR*PVIGNT
Trigger: AGTATTCCCAATCACTGGTCATCTGACCCTACTTGA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGCAATCACAGGGAAGATaGCTAGATTTCCTAACATCC +
Preference number: 4 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWQSQGR*LDFLTS
Trigger: GGATGTTAGGAAATCTAGTCATCTTCCCTGTGATTG...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR GCA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGAGCTCAGATAACAAGTaGCACTTCCAGGCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKSSDNK*HFQAKG
Trigger: TCCTTTAGCCTGGAAGTGGCACTTGTTATCTGAGCT...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGCGGAAGCCTCTGCACTaGTCATTTCTGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLRKPLH*SFLKRS
Trigger: AGACCTCTTCAGAAATGACCAGTGCAGAGGCTTCCG...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACATTGTACCTTATATATaGCAGGCTTCACTGCATCTG +
Preference number: 4 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYIVPYI*QASLHL
Trigger: CAGATGCAGTGAAGCCTGCCATATATAAGGTACAAT...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGCAGAGACAAGGAAATaGCTGTTAGCTTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNAETRK*LLALHH
Trigger: ATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAGATGAAGCAGAAGAATaGTCTGGACCTTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: SQKHPVPLLGFTHLTICSDEAEE*SGPSGL
Trigger: CAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATC...TGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCTACGGAGCAGATCATaGAATGAACCCAAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNLRSRS*NEPKSV
Trigger: CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTACACCCATTCACAAGTaGTCACAAAAACACCCAGTA +
Preference number: 4 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRTPIHK*SQKHPV
Trigger: TACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGT...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGTAATATTGGATCCTaGAATAGTCAGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WLYPLNNMLNMSSLTPKPSNIGS*NSQTGA
Trigger: GGCTCCTGTCTGACTATTCCAGGATCCAATATTACT...AGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGTTACTATCACCCTCGTaGGCATACATGATGGTTACC +
Preference number: 4 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKLLSPS*AYMMVT
Trigger: GGTAACCATCATGTATGCCCACGAGGGTGATAGTAA...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTTACTATCACCCTCGTaGGCATACATGATGGTTACC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNLLSPS*AYMMVT
Trigger: GGTAACCATCATGTATGCCCACGAGGGTGATAGTAA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp CAGTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACGTCTGTGGTATTCCTTaGTCAAAGAAGTACTCTAAG +
Preference number: 4 (lower is better)
Translates to: QFSIHPFTSGHKNTQYLYVCGIP*SKKYSK
Trigger: CTTAGAGTACTTCTTTGACCAAGGAATACCACAGAC...GTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTCGGTAGGGTGTCTGTaGTATTCCTTGGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNSVGCL*YSLVKE
Trigger: TTCTTTGACCAAGGAATACCACAGACACCCTACCGA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGCAAGTAGTGATGGTTaGCAGTTTCAGTGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNASSDG*QFQCKF
Trigger: GAACTTACACTGAAACTGTCAACCATCACTACTTGC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR TCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAGGAGCAAGTAAGATCTaGGCCACTGTTCTATCGGTA +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSIGASKI*ATVLSV
Trigger: TACCGATAGAACAGTGGCTCAGATCTTACTTGCTCC...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCAATCACAGGGAAGATaGCTAGATTTCCTAACATCC +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNQSQGR*LDFLTS
Trigger: GGATGTTAGGAAATCTAGTCATCTTCCCTGTGATTG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR GCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAGTTCCTATGGCTCTGTaGATAGGGGCCATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSIVPMAL*IGAICS
Trigger: AGAACAAATGGCCCCTATGCACAGAGCCATAGGAAC...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR TCA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGTTTCTGAAGAGGTCTTaGCATCAAGCTGATTTAGCA +
Preference number: 4 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMFLKRS*HQADLA
Trigger: TGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAA...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR TCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATCAAGTAGGGTCAGATaGCCAGTGATTGGGAATACT +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSISSRVR*PVIGNT
Trigger: AGTATTCCCAATCACTGGTCATCTGACCCTACTTGA...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATGCAGAGACAAGGAAATaGCTGTTAGCTTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNAETRK*LLALHH
Trigger: ATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGC...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTCGCTTGACATTTATTaGATTCAGTGCCATATCTGG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNSLDIY*IQCHIW
Trigger: CCAGATATGGCACTGAATCCAATAAATGTCAAGCGA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATGTCTGTGGTATTCCTTaGTCAAAGAAGTACTCTAAG +
Preference number: 4 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNVCGIP*SKKYSK
Trigger: CTTAGAGTACTTCTTTGACCAAGGAATACCACAGAC...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CCA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATCGCTTGACATTTATTaGATTCAGTGCCATATCTGG +
Preference number: 4 (lower is better)
Translates to: QKHPVPLLGFTHLTICSISLDIY*IQCHIW
Trigger: CCAGATATGGCACTGAATCCAATAAATGTCAAGCGA...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS GCA 90 bp CGTGGAGCACCATCCACCTCTTCTCCACCTGGACAGGCTGCTGGCTaGCGGATCTTCTTCGGTTTGGTGGGGCTGCTCACCTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RGAPSTSSPPGQAAG*RIFFGLVGLLTLGP
Trigger: GGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 90 bp CTTCTCCACCTGGACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTTaGTGGGGCTGCTCACCTTGGGGCCCTCAGGACAGGACACAGGGG +
Preference number: 5 (lower is better)
Translates to: LLHLDRLLAAGSSSV*WGCSPWGPQDRTQG
Trigger: CCCCTGTGTCCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 90 bp ATCCCGTGGAGCACCATCCACCTCTTCTCCACCTGGACAGGCTGCTaGCTGCCGGATCTTCTTCGGTTTGGTGGGGCTGCTCACCTTGGG +
Preference number: 5 (lower is better)
Translates to: IPWSTIHLFSTWTGC*LPDLLRFGGAAHLG
Trigger: CCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCACGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS-3UTR CAA 90 bp CCAGCTGCAGCCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCCCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PAAACPGRVENAPLPPACPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...GCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGGAAGGCGATGGCTGGTaGGAGAGAAGCCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVEGDGW*ERSQAV
Trigger: GACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTC...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS CCA 90 bp CCAGGCCGTCTAGTGGGGGAGGATGGTTGGAACATAGCATTGAAGTaGGCTCGGCTTTCAAGCTGCATACGGTGGCCCAGTGGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PGRLVGEDGWNIALK*ARLSSCIRWPSGEA
Trigger: CGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CCA 90 bp TTGCCACGGGACAAAAGGACTAGACAGGGAAACACAACTGGCCCTTaGTTACGCCAATGGCGTTGCAGCGCGCGGGGCACAACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LPRDKRTRQGNTTGP*LRQWRCSARGTTLG
Trigger: CCCGAGGGTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTTCCCTGTCTAGTCCTTTTGTCCCGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CAA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCGAGCCTTAGGAGGGTaGGGGACCCCAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: RSRPGMITVQGRPPVPMARALGG*GTPDEA
Trigger: TGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCG...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATCGAGCCTTAGGAGGGTaGGGGACCCCAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHRALGG*GTPDEA
Trigger: TGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCG...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp CAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QAWHDHCPGKAPSSYGSVPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...CACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS GCA 90 bp TTCATCCCGTGGAGCACCATCCACCTCTTCTCCACCTGGACAGGCTaGTGGCTGCCGGATCTTCTTCGGTTTGGTGGGGCTGCTCACCTT +
Preference number: 5 (lower is better)
Translates to: FIPWSTIHLFSTWTG*WLPDLLRFGGAAHL
Trigger: AAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCACGGGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS GCA 90 bp ACTAGACAGGGAAACACAACTGGCCCTTGGTTACGCCAATGGCGTTaGAGCGCGCGGGGCACAACCCTCGGGGTTAAAGAGCCTCCTCGA +
Preference number: 5 (lower is better)
Translates to: TRQGNTTGPWLRQWR*SARGTTLGVKEPPR
Trigger: TCGAGGAGGCTCTTTAACCCCGAGGGTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTTCCCTGTCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS CCA 90 bp GACCGACTTCACTCCAAGGATCTGGTGTGGGCCAAGGCTAGGGAGTaGGCAGAAGGCGATGGCTGGTTGGAGAGAAGCCAGGCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: DRLHSKDLVWAKARE*AEGDGWLERSQAVL
Trigger: TAAGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTCTGCCCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431028.5
CDS-3UTR CAA 90 bp TGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCATACAGAAGTGCCACTaGGGCAGCCCTTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: CPGKAPSSYGSVHRGHLFIQKCH*GSPSAG
Trigger: CCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTAT...GAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGGGCAGGCAGGGCTGTaGAGAGCTCTTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GMITVQGRPPVPMALCIGGQAGL*RALQPV
Trigger: AACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCCC...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp CATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: HDHCPGKAPSSYGSVHRGPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...GCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CAA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGGAAAAGAGCCACATATaGCGAGGCTCCTGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLEKSHI*RGSCPL
Trigger: GAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTTC...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCAGAGGGGTCTGTAGCTaGCATAGACCCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: MITVQGRPPVPMALCIGARGVCS*HRPHLQ
Trigger: CTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCT...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp CCAGCTGCAGCCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCGTTAGCTTTGCACCATaGAAGGGTACGCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: PAAACPGRVENAPLPPACVSFAP*KGTHSL
Trigger: CAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAAC...GCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp ATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTCGAGCCTTAGGAGGGTaGGGGACCCCAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: ITVQGRPPVPMALCIGAIRALGG*GTPDEA
Trigger: TGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCG...AATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS CCA 90 bp GCCCCAGAGCTGGAGCAGCCCAGGACCCGAATGAAGCTGGCTCAGTaGGTGTGTCTCATTCATGTCAGGGCTGGAGAAAAGAGCCACATA +
Preference number: 5 (lower is better)
Translates to: APELEQPRTRMKLAQ*VCLIHVRAGEKSHI
Trigger: TATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACCCACTGAGCCAGCTTCATTCGGGTCCTGGGCTGCTCCAGCTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000470115.1
ENST00000493511.1
ENST00000622534.1
CDS CCA 90 bp GTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTaGTGTGGGCCAAGGCTAGGGAGTGGGCAGAAGGCGATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: VHRGHLFLTDFTPRI*CGPRLGSGQKAMAG
Trigger: ACCAGCCATCGCCTTCTGCCCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
ENST00000495298.1
CDS-3UTR CAA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCAGGTAAACACGTGTGCTaGGTCCGGAGTCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPGKHVC*VRSRCR
Trigger: CCGGCACCGACTCCGGACCAAGCACACGTGTTTACC...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS-3UTR CAA 90 bp AGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCACAGATGAGCTCTCACTaGGGCCCTCACTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RSPGEAGLKVQAWHDHCPQMSSH*GPHFLP
Trigger: TGGAAGAAAGTGAGGGCCCAAGTGAGAGCTCATCTG...TGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGCTCTCGGAAGTCCTaGGTGAGATGGAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHCSRKS*VRWRHF
Trigger: GAAGTGCCTCCATCTCACCAAGGACTTCCGAGAGCA...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp AGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCGAAGGTCCCAGAATTaGATTTTCCGGTCACTCCCC +
Preference number: 5 (lower is better)
Translates to: RSRPGMITVQGRPPVPMARRSQN*IFRSLP
Trigger: GGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCG...AGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp CCCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCCGAGCCTTAGGAGGGTaGGGGACCCCAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSCMRSIGSLRSRSWNEPRALGG*GTPDEA
Trigger: TGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCG...GGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS GCA 90 bp GAGGATGGTTGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTaGATACGGTGGCCCAGTGGGGAGGCGAGTCCACGGACAAAATGG +
Preference number: 5 (lower is better)
Translates to: EDGWNIALKWARLSS*IRWPSGEASPRTKW
Trigger: CCATTTTGTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CCA 90 bp CCGAATGAAGCTGGCTCAGTGGGTGTGTCTCATTCATGTCAGGGCTaGAGAAAAGAGCCACATATTGCGAGGCTCCTGCCCCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PNEAGSVGVSHSCQG*RKEPHIARLLPPLA
Trigger: TGCCAGAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACCCACTGAGCCAGCTTCATTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000470115.1
ENST00000493511.1
ENST00000622534.1
CDS CCA 90 bp TGGCTGGTTGGAGAGAAGCCAGGCCGTCTAGTGGGGGAGGATGGTTaGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTGCATACGG +
Preference number: 5 (lower is better)
Translates to: WLVGEKPGRLVGEDG*NIALKWARLSSCIR
Trigger: CCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCCAACCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CCA 90 bp GCGATGGCTGGTTGGAGAGAAGCCAGGCCGTCTAGTGGGGGAGGATaGTTGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: AMAGWREARPSSGGG*LEHSIEVGSAFKLH
Trigger: ATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCCAACCAGCCATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS-3UTR CAA 90 bp GGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGTTAGCTTTGCACCATaGAAGGGTACGCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: GMITVQGRPPVPMALCIGVSFAP*KGTHSL
Trigger: CAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAAC...CCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCGAAGGTCCCAGAATTaGATTTTCCGGTCACTCCCC +
Preference number: 5 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWRRSQN*IFRSLP
Trigger: GGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCG...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp ATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCTATCTCCTGCAGCTATaGTCCCAAGCCAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: MITVQGRPPVPMALCIGAYLLQL*SQASRI
Trigger: GATCCGACTGGCTTGGGACAATAGCTGCAGGAGATA...GGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTATCTCCTGCAGCTATaGTCCCAAGCCAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLYLLQL*SQASRI
Trigger: GATCCGACTGGCTTGGGACAATAGCTGCAGGAGATA...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp AGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCAAGTGGGGGAGGATGGTaGGAACATAGCATTGAAGTG +
Preference number: 5 (lower is better)
Translates to: RVGSKESWGGRPKGPGLASGGGW*EHSIEV
Trigger: CACTTCAATGCTATGTTCCAACCATCCTCCCCCACT...TGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLRGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CAA 90 bp GAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACT +
Preference number: 5 (lower is better)
Translates to: EWDLRSPGEAGLKVQAWHVHRGH*FLTDFT
Trigger: AGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC...ATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS TCA 90 bp AAGTCTAAGTTCGAAGATGGCGCCGCCTGTCTGGTCGCGGTCTTATaGCGAAATCTTGTTAGCTGCTCTTCACTGACGCCCCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: KSKFEDGAACLVAVL*RNLVSCSSLTPPPQ
Trigger: CTGGGGTGGGGGCGTCAGTGAAGAGCAGCTAACAAGATTTCGTCATAAGACCGCGACCAGACAGGCGGCGCCATCTTCGAACTTAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS GCA 90 bp GGAGTTGAAGTCGCCACCTCTGACTTCCCCAACAGGCAGCCAACTTaGCACGGGACAAAAGGACTAGACAGGGAAACACAACTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: GVEVATSDFPNRQPT*HGTKGLDRETQLAL
Trigger: AAGGGCCAGTTGTGTTTCCCTGTCTAGTCCTTTTGTCCCGTGGCAAGTTGGCTGCCTGTTGGGGAAGTCAGAGGTGGCGACTTCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS CCA 90 bp TGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTGCATACGGTaGCCCAGTGGGGAGGCGAGTCCACGGACAAAATGGATTCGAACC +
Preference number: 5 (lower is better)
Translates to: WNIALKWARLSSCIR*PSGEASPRTKWIRT
Trigger: GGTTCGAATCCATTTTGTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS-3UTR CAA 90 bp GCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATGCCGATCTAGGTCTTTaGACAACTTCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: AWHDHCPGKAPSSYGSVHADLGL*TTSAAA
Trigger: TGCTGCTGCTGAAGTTGTCAAAAGACCTAGATCGGC...ATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp CCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATACAGATGAGCTCTCACTaGGGCCCTCACTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PGMITVQGRPPVPMALCIQMSSH*GPHFLP
Trigger: TGGAAGAAAGTGAGGGCCCAAGTGAGAGCTCATCTG...TATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCACCACTGGGGCAGAACTaGAGGTCCCAGATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPPLGQN*RSQMQP
Trigger: CGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGG...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp CATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTGGGCCAAGAGGGGTCTGTAGCTaGCATAGACCCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: HRGHLFLTDFTPRIWCGPRGVCS*HRPHLQ
Trigger: CTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCT...TGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACGGTTGGAACATAGCATaGAAGTGGGCTCGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHGWNIA*KWARLS
Trigger: TGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACC...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGGTTGGAACATAGCATaGAAGTGGGCTCGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLGWNIA*KWARLS
Trigger: TGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACC...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS TCA 90 bp GTCTGGTCGCGGTCTTATGACGAAATCTTGTTAGCTGCTCTTCACTaGCGCCCCCACCCCAGTGCACAAGGTAAACACGTGTGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: VWSRSYDEILLAALH*RPHPSAQGKHVCLV
Trigger: GACCAAGCACACGTGTTTACCTTGTGCACTGGGGTGGGGGCGTCAGTGAAGAGCAGCTAACAAGATTTCGTCATAAGACCGCGACCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS-3UTR CAA 90 bp TCCAGGCCTGGCATGATCACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGCAGAGTTGCCACACATaGTACCTTATATATGGCAGG +
Preference number: 5 (lower is better)
Translates to: SRPGMITVQGRPPVPMALQSCHT*YLIYGR
Trigger: CCTGCCATATATAAGGTACAATGTGTGGCAACTCTG...CAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTGATCATGCCAGGCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GTAGAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCACCCCACCTGCAGAGTaGCCACACATTGTACCTTAT +
Preference number: 5 (lower is better)
Translates to: VERVGSKESWGGRPKGPGTPPAE*PHIVPY
Trigger: ATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGT...GCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp CCAGCTGCAGCCTGTCCAGGCAGAGTTGAGAATGCCCCTCTCCCTCCTGCATGCACCCAAATCTGTGTCTaGAAAGAGCAAGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: PAAACPGRVENAPLPPACTQICV*KEQVVM
Trigger: CATCACTACTTGCTCTTTCAAGACACAGATTTGGGT...GCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp CCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACTGTCCAGGGAAGACCCAAATCTGTGTCTaGAAAGAGCAAGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: PGEAGLKVQAWHDHCPGKTQICV*KEQVVM
Trigger: CATCACTACTTGCTCTTTCAAGACACAGATTTGGGT...CTTCCCTGGACAGTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CAA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDRGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CAA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGCTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLLNMSS*TPKPRS
Trigger: TGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS GCA 90 bp CACCCCAGTGCACAAGGTAAACACGTGTGCTTGGTCCGGAGTCGGTaGCGGGCTAGTTTTCTCTTAGACTCTGTATTCCATAATGCAGCG +
Preference number: 5 (lower is better)
Translates to: HPSAQGKHVCLVRSR*RASFLLDSVFHNAA
Trigger: CGCTGCATTATGGAATACAGAGTCTAAGAGAAAACTAGCCCGGCACCGACTCCGGACCAAGCACACGTGTTTACCTTGTGCACTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS-3UTR CAA 90 bp CTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTTCTCATGGGCAGGCAGGGCTGTaGAGAGCTCTTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LNMSSLTPKPRSGLSVSHGQAGL*RALQPV
Trigger: AACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCCC...ATGAGAAACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GAAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGCAGAGTTGCCACACATaGTACCTTATATATGGCAGG +
Preference number: 5 (lower is better)
Translates to: ERVGSKESWGGRPKGPGLQSCHT*YLIYGR
Trigger: CCTGCCATATATAAGGTACAATGTGTGGCAACTCTG...CAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGCATGATCACGTACTCAAGAAGCGCTaGATAGAGTTTATGGGTTCG +
Preference number: 5 (lower is better)
Translates to: DLRSPGEAGLKVQAWHDHVLKKR*IEFMGS
Trigger: CGAACCCATAAACTCTATCAAGCGCTTCTTGAGTAC...GTGATCATGCCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp AAAGAGTGGGATCTAAGGAGTCCTGGGGAGGCAGGCCTAAAGGTCCAGGCCTGGGTACTCAAGAAGCGCTaGATAGAGTTTATGGGTTCG +
Preference number: 5 (lower is better)
Translates to: KEWDLRSPGEAGLKVQAWVLKKR*IEFMGS
Trigger: CGAACCCATAAACTCTATCAAGCGCTTCTTGAGTAC...CCAGGCCTGGACCTTTAGGCCTGCCTCCCCAGGACTCCTTAGATCCCACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp ATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCCCAGACCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: MVDSFSVSSSLRRVGDPRPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...TCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS TCA 90 bp TCCCACAGAGTCCATAAGAGGCATAGCAGTTGTCCTGAGCCACAGTaGCACCATTGTAGGGAAGCAGCCAGGCCAGTTCTGTACTCAAGA +
Preference number: 5 (lower is better)
Translates to: SHRVHKRHSSCPEPQ*HHCREAARPVLYSR
Trigger: TCTTGAGTACAGAACTGGCCTGGCTGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACAACTGCTATGCCTCTTATGGACTCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000415683.2
ENST00000454704.5
CDS-3UTR CAA 90 bp CACTGTCCAGGGAAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGACCCAAATCTGTGTCTaGAAAGAGCAAGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: HCPGKAPSSYGSVHRGHLTQICV*KEQVVM
Trigger: CATCACTACTTGCTCTTTCAAGACACAGATTTGGGT...CAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTTCCCTGGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
CDS-3UTR CAA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCACCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp TTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCCCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LDPGIVRQEPSCRYPFQFPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...GAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGTTACGCCAATGGCGTaGCAGCGCGCGGGGCACAAC +
Preference number: 5 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRVTPMA*QRAGHN
Trigger: GTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAAC...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS GCA 90 bp AGGAACAAGTGCTTATCAAACTGGGAAGGTGCTCTTATTTACAGCTaGTGGCTCAAGAATCATGTGCTGGGCTGGGCGCAGTGGCTCATG +
Preference number: 5 (lower is better)
Translates to: RNKCLSNWEGALIYS*WLKNHVLGWAQWLM
Trigger: CATGAGCCACTGCGCCCAGCCCAGCACATGATTCTTGAGCCAGCAGCTGTAAATAAGAGCACCTTCCCAGTTTGATAAGCACTTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS-3UTR CAA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTCGGATCTTCTTCGGTTaGGTGGGGCTGCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: TSVSRITITLVGIHDGYPRIFFG*VGLLTL
Trigger: CAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCG...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGCCACTGGGGCAGAACTaGAGGTCCCAGATGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWPLGQN*RSQMQP
Trigger: CGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGG...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAGTTAGCTTTGCACCATaGAAGGGTACGCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPVSFAP*KGTHSL
Trigger: CAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAAC...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACCGAAGGTCCCAGAATTaGATTTTCCGGTCACTCCCC +
Preference number: 5 (lower is better)
Translates to: VVMVDSFSVSSSLRRVGDRRSQN*IFRSLP
Trigger: GGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCG...GTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACGTACTCAAGAAGCGCTaGATAGAGTTTATGGGTTCG +
Preference number: 5 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDVLKKR*IEFMGS
Trigger: CGAACCCATAAACTCTATCAAGCGCTTCTTGAGTAC...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp GTAGTGATGGTTGACAGTTTCAGTGTAAGTTCGAGCCTTAGGAGGGTTGGGGACTATCTCCTGCAGCTATaGTCCCAAGCCAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: VVMVDSFSVSSSLRRVGDYLLQL*SQASRI
Trigger: GATCCGACTGGCTTGGGACAATAGCTGCAGGAGATA...GTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGT +
Preference number: 5 (lower is better)
Translates to: KAPSSYGSVHRGHLFLTDRSTGR*TFIGFS
Trigger: ACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCG...GTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp TGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTGAAGGCGATGGCTGGTaGGAGAGAAGCCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: WLYPLNNMLNMSSLTPKPEGDGW*ERSQAV
Trigger: GACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTC...AGGCTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp CATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTGAAGGCGATGGCTGGTaGGAGAGAAGCCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: HSQVVTKTPSTFTWLYPLEGDGW*ERSQAV
Trigger: GACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTC...AAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS TCA 90 bp AAGTCCTTGGTGAGATGGAGGCACTTCCAAACAGGAGCCATGATATaGTTTGGTAAGCCATTGGGAGCCATTCCTCGGCAGTGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: KSLVRWRHFQTGAMI*FGKPLGAIPRQCGF
Trigger: GAAACCACACTGCCGAGGAATGGCTCCCAATGGCTTACCAAATCATATCATGGCTCCTGTTTGGAAGTGCCTCCATCTCACCAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000480989.1
ENST00000622534.1
CDS CCA 90 bp ATCAGGGCCGGGAGACCTGACACTAGTTTGTACTCTACCAGAATTTaGGAGGGCATGTGGGTTAGGATCCAACAGCTGCTGTTAGATGTT +
Preference number: 5 (lower is better)
Translates to: IRAGRPDTSLYSTRI*EGMWVRIQQLLLDV
Trigger: AACATCTAACAGCAGCTGTTGGATCCTAACCCACATGCCCTCCCAAATTCTGGTAGAGTACAAACTAGTGTCAGGTCTCCCGGCCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484680.1
ENST00000495298.1
CDS-3UTR CAA 90 bp CAGAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGAAGCAGCAGCTCTGCCTaGGACTTTCGACCTCGTTTC +
Preference number: 5 (lower is better)
Translates to: QKAVILDPGIVRQEPSCRSSSSA*DFRPRF
Trigger: GAAACGAGGTCGAAAGTCCAAGGCAGAGCTGCTGCT...TCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCATACAGAAGTGCCACTaGGGCAGCCCTTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICIQKCH*GSPSAG
Trigger: CCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTAT...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATAGAAAAGAGCCACATATaGCGAGGCTCCTGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQIEKSHI*RGSCPL
Trigger: GAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTTC...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp CCTCCTGCATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCACGCTCTACAGGTCGCTaGACATTTATTGGATTCAGT +
Preference number: 5 (lower is better)
Translates to: PPACAALVLYGADHGMNPRSTGR*TFIGFS
Trigger: ACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCG...TGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCGAAGGCGATGGCTGGTaGGAGAGAAGCCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICEGDGW*ERSQAV
Trigger: GACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTC...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp GGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTCGGATCTTCTTCGGTTaGGTGGGGCTGCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: GQRSTLSNFSLTNYYHPRRIFFG*VGLLTL
Trigger: CAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCG...ACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCGAGCCTTAGGAGGGTaGGGGACCCCAGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNRALGG*GTPDEA
Trigger: TGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS TCA 90 bp GAAGCCTCTGCACTGGTCATTTCTGAAGAGGTCTTGACATCAAGCTaGTTTAGCACCTCTTGTCCAGGAGAGTCTACCACAGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: EASALVISEEVLTSS*FSTSCPGESTTVMF
Trigger: GAACATGACTGTGGTAGACTCTCCTGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCAGAGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000423998.1
ENST00000457748.1
ENST00000622534.1
CDS TCA 90 bp ACATCTCTACGGAAGCCTCTGCACTGGTCATTTCTGAAGAGGTCTTaGCATCAAGCTGATTTAGCACCTCTTGTCCAGGAGAGTCTACCA +
Preference number: 5 (lower is better)
Translates to: TSLRKPLHWSFLKRS*HQADLAPLVQESLP
Trigger: TGGTAGACTCTCCTGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCAGAGGCTTCCGTAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000423998.1
ENST00000457748.1
ENST00000622534.1
CDS-3UTR CAA 90 bp ACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTACCCTGCCGATCTAGGTCTTTaGACAACTTCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSVSRITITLVGIHDGYPADLGL*TTSAAA
Trigger: TGCTGCTGCTGAAGTTGTCAAAAGACCTAGATCGGC...AGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGTGCTCTCGGAAGTCCTaGGTGAGATGGAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWCSRKS*VRWRHF
Trigger: GAAGTGCCTCCATCTCACCAAGGACTTCCGAGAGCA...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTAAGAGGGGTCTGTAGCTaGCATAGACCCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALRGVCS*HRPHLQ
Trigger: CTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCT...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTCCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: VLHTPIHKWSQKHPVPLLPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...AAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp CAGAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGAGGTTGGAACATAGCATaGAAGTGGGCTCGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: QKAVILDPGIVRQEPSCRGWNIA*KWARLS
Trigger: TGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACC...TCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp CCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACCCTTTTCAGTTCTCCATAAGTGGGGGAGGATGGTaGGAACATAGCATTGAAGTG +
Preference number: 5 (lower is better)
Translates to: PGIVRQEPSCRYPFQFSISGGGW*EHSIEV
Trigger: CACTTCAATGCTATGTTCCAACCATCCTCCCCCACT...TATGGAGAACTGAAAAGGGTATCTGCATGAAGGCTCCTGTCTGACTATTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTATTGCCTCCGACGGAGTaGAAGTCGCCACCTCTGACT +
Preference number: 5 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALLPPTE*KSPPLT
Trigger: AGTCAGAGGTGGCGACTTCAACTCCGTCGGAGGCAA...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS TCA 90 bp ACCCCAGATGAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGGCTGGAAAGGAGAC +
Preference number: 5 (lower is better)
Translates to: TPDEAEEWSGPSGLS*YGIRSALYIGWKGD
Trigger: GTCTCCTTTCCAGCCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495298.1
CDS-3UTR CAA 90 bp ATGCGCAGCATTGGTTCTCTACGGAGCAGATCATGGAATGAACCCAAATCTGTGGTACTCAAGAAGCGCTaGATAGAGTTTATGGGTTCG +
Preference number: 5 (lower is better)
Translates to: MRSIGSLRSRSWNEPKSVVLKKR*IEFMGS
Trigger: CGAACCCATAAACTCTATCAAGCGCTTCTTGAGTAC...CACAGATTTGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS-3UTR CAA 90 bp AGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTTGACCGACTTCACTCCAACCCAAATCTGTGTCTaGAAAGAGCAAGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: SSYGSVHRGHLFLTDFTPTQICV*KEQVVM
Trigger: CATCACTACTTGCTCTTTCAAGACACAGATTTGGGT...TGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
CDS-3UTR CAA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CAA 90 bp CAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATACCTGTCCAGGCAGAGTaGAGAATGCCCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QKHPVPLLGFTHLTICSIPVQAE*RMPLSL
Trigger: GAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGG...TATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGGCATACATGATGGTTGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACT +
Preference number: 5 (lower is better)
Translates to: KQLQSHELLSPSWAYMMVVHRGH*FLTDFT
Trigger: AGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC...AACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS TCA 90 bp ACCCCAGATGAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGCAGAATTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TPDEAEEWSGPSGLS*YGIRSALYIAEFGR
Trigger: CCTCCCAAATTCTGCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS GCA 90 bp ATGATCACGATGAGGGTTGAGGGAAAAACAGTTGGTAGGAACAAGTaGTTATCAAACTGGGAAGGTGCTCTTATTTACAGCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: MITMRVEGKTVGRNK*LSNWEGALIYSCWL
Trigger: GAGCCAGCAGCTGTAAATAAGAGCACCTTCCCAGTTTGATAAGCACTTGTTCCTACCAACTGTTTTTCCCTCAACCCTCATCGTGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS CCA 90 bp TGGACAAAGTCCCAGAGACAGCTCTTTCCCAGTTTTTATCTTCTTTaGCAATACCTCCCCCTCCAATCACTGCCCTATCAGCATCTTAAA +
Preference number: 5 (lower is better)
Translates to: WTKSQRQLFPSFYLL*QYLPLQSLPYQHLK
Trigger: TTTAAGATGCTGATAGGGCAGTGATTGGAGGGGGAGGTATTGCCAAAGAAGATAAAAACTGGGAAAGAGCTGTCTCTGGGACTTTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480989.1
CDS CCA 90 bp CAGTACGGTAGGGAAGATTATATACAACTCTGTGCTAAGATTTTCTaGGATATCAGGGCCGGGAGACCTGACACTAGTTTGTACTCTACC +
Preference number: 5 (lower is better)
Translates to: QYGREDYIQLCAKIF*DIRAGRPDTSLYST
Trigger: GGTAGAGTACAAACTAGTGTCAGGTCTCCCGGCCCTGATATCCCAGAAAATCTTAGCACAGAGTTGTATATAATCTTCCCTACCGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495298.1
CDS-3UTR CAA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTCAGAGTTGCCACACATaGTACCTTATATATGGCAGG +
Preference number: 5 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVQSCHT*YLIYGR
Trigger: CCTGCCATATATAAGGTACAATGTGTGGCAACTCTG...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTGGACCCCACCTGCAGAGTaGCCACACATTGTACCTTAT +
Preference number: 5 (lower is better)
Translates to: SKKYSKQLQSHELLSPSWTPPAE*PHIVPY
Trigger: ATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGT...CCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTAGTTAGCTTTGCACCATaGAAGGGTACGCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALVSFAP*KGTHSL
Trigger: CAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAAC...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCCGAAGGTCCCAGAATTaGATTTTCCGGTCACTCCCC +
Preference number: 5 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICRRSQN*IFRSLP
Trigger: GGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCG...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATTATCTCCTGCAGCTATaGTCCCAAGCCAGTCGGATC +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNYLLQL*SQASRI
Trigger: GATCCGACTGGCTTGGGACAATAGCTGCAGGAGATA...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CAA 90 bp AATATGCTCAATATGAGCAGTTTGACTCCCAAGCCTAGGTCAGGCCTGAGTGTTCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGT +
Preference number: 5 (lower is better)
Translates to: NMLNMSSLTPKPRSGLSVRSTGR*TFIGFS
Trigger: ACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCG...AACACTCAGGCCTGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAGCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCACCTGCATGCGCAGCATaGGTTCTCTACGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SQKHPVPLLGFTHLTICSPACAA*VLYGAD
Trigger: ATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGG...TGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICRGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp GTTCTCCATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACT +
Preference number: 5 (lower is better)
Translates to: VLHTPIHKWSQKHPVPLLVHRGH*FLTDFT
Trigger: AGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC...AAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTATGGAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGAAACACAACTGGCCCTaGGTTACGCCAATGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMKHNWP*VTPMAL
Trigger: CAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTT...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS-3UTR CAA 90 bp ACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGACTCCCAAGCTCCAACAAAGTGAGTaGCCTCCGACGGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TWLYPLNNMLNMSSLTPKLQQSE*PPTELK
Trigger: CTTCAACTCCGTCGGAGGCAACTCACTTTGTTGGAG...CTTGGGAGTCAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS TCA 90 bp ACCCCAGATGAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGGAAATCTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: TPDEAEEWSGPSGLS*YGIRSALYIGNLRS
Trigger: AGAGCGAAGATTTCCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000457098.5
CDS CCA 90 bp AGGGTTGAGGGAAAAACAGTTGGTAGGAACAAGTGCTTATCAAACTaGGAAGGTGCTCTTATTTACAGCTGCTGGCTCAAGAATCATGTG +
Preference number: 5 (lower is better)
Translates to: RVEGKTVGRNKCLSN*EGALIYSCWLKNHV
Trigger: CACATGATTCTTGAGCCAGCAGCTGTAAATAAGAGCACCTTCCCAGTTTGATAAGCACTTGTTCCTACCAACTGTTTTTCCCTCAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS-3UTR CAA 90 bp AGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATATGAGCAGTTTGAGCAGCAGCTCTGCCTaGGACTTTCGACCTCGTTTC +
Preference number: 5 (lower is better)
Translates to: STFTWLYPLNNMLNMSSLSSSSA*DFRPRF
Trigger: GAAACGAGGTCGAAAGTCCAAGGCAGAGCTGCTGCT...CAAACTGCTCATATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGACCCCACCTGCAGAGTaGCCACACATTGTACCTTAT +
Preference number: 5 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMTPPAE*PHIVPY
Trigger: ATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGT...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp GAAGGCAGTAATATTGGATCCTGGAATAGTCAGACAGGAGCCTTCATGCAGATACGCTCTACAGGTCGCTaGACATTTATTGGATTCAGT +
Preference number: 5 (lower is better)
Translates to: EGSNIGSWNSQTGAFMQIRSTGR*TFIGFS
Trigger: ACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCG...TATCTGCATGAAGGCTCCTGTCTGACTATTCCAGGATCCAATATTACTGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp ATACACCCATTCACAAGTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTAAGTGGGGGAGGATGGTaGGAACATAGCATTGAAGTG +
Preference number: 5 (lower is better)
Translates to: IHPFTSGHKNTQYLYLALSGGGW*EHSIEV
Trigger: CACTTCAATGCTATGTTCCAACCATCCTCCCCCACT...TAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCACTTGTGAATGGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCGTGCATAGGGGCCATTaGTTCTTGACCGACTTCACT +
Preference number: 5 (lower is better)
Translates to: WSQKHPVPLLGFTHLTICVHRGH*FLTDFT
Trigger: AGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCAC...GCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNRGHLF*TDFTPR
Trigger: CCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCT...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNLNMSS*TPKPRS
Trigger: TGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGT +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNRSTGR*TFIGFS
Trigger: ACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATACCCAAATCTGTGTCTaGAAAGAGCAAGTAGTGATG +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNTQICV*KEQVVM
Trigger: CATCACTACTTGCTCTTTCAAGACACAGATTTGGGT...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457098.5
CDS-3UTR CAA 90 bp ACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCTCAATCTCAATATGAGCAGTTaGACTCCCAAGCCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: TKTPSTFTWLYPLNNMLNLNMSS*TPKPRS
Trigger: TGACCTAGGCTTGGGAGTCAAACTGCTCATATTGAG...ATTGAGCATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
CDS-3UTR CAA 90 bp GTGGTCACAAAAACACCCAGTACCTTTACTTGGCTTTACCCACTTAACAATATGCAGAAGGCAGTAATATaGGATCCTGGAATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: VVTKTPSTFTWLYPLNNMQKAVI*DPGIVR
Trigger: TCTGACTATTCCAGGATCCAATATTACTGCCTTCTG...CATATTGTTAAGTGGGTAAAGCCAAGTAAAGGTACTGGGTGTTTTTGTGACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS-3UTR CAA 90 bp TCTGTGGTATTCCTTGGTCAAAGAAGTACTCTAAGCAACTTCAGTCTCACGAATCAGAAGGCAGTAATATaGGATCCTGGAATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SVVFLGQRSTLSNFSLTNQKAVI*DPGIVR
Trigger: TCTGACTATTCCAGGATCCAATATTACTGCCTTCTG...ATTCGTGAGACTGAAGTTGCTTAGAGTACTTCTTTGACCAAGGAATACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000359541.6
CDS GCA 72 bp CTGCTGGCTGCCGGATCTTCTTCGGTTTGGTGGGGCTaGTCACCTTGGGGCCCTCAGGACAGGACACAGGGG +
Preference number: 6 (lower is better)
Translates to: LLAAGSSSVWWG*SPWGPQDRTQG
Trigger: CCCCTGTGTCCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp CTGGACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTTaGTGGGGCTGCTCACCTTGGGGCCCTCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: LDRLLAAGSSSV*WGCSPWGPQDR
Trigger: CCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CAA 72 bp CCTGGACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTaGGTGGGGCTGCTCACCTTGGGGCCCTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: PGQAAGCRIFFG*VGLLTLGPSGQ
Trigger: CTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS GCA 72 bp CGAGTTCCAGGGCGTCTTCAGCGGCGCCAGGGACGCTaGAGGGCCTCATGGGAGTTGCAGTGTCAAAAAGGG +
Preference number: 6 (lower is better)
Translates to: RVPGRLQRRQGR*RASWELQCQKG
Trigger: CCCTTTTTGACACTGCAACTCCCATGAGGCCCTGCAGCGTCCCTGGCGCCGCTGAAGACGCCCTGGAACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264720.7
CDS CCA 72 bp GACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTTGGTaGGGCTGCTCACCTTGGGGCCCTCAGGACAGGACA +
Preference number: 6 (lower is better)
Translates to: DRLLAAGSSSVW*GCSPWGPQDRT
Trigger: TGTCCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CAA 90 bp TCTTCTCCACCTGGACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTaGGTGGGGCTGCTCACCTTGGGGCCCTCAGGACAGGACACAGGG +
Preference number: 6 (lower is better)
Translates to: SSPPGQAAGCRIFFG*VGLLTLGPSGQDTG
Trigger: CCCTGTGTCCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS GCA 72 bp CCATCCACCTCTTCTCCACCTGGACAGGCTGCTGGCTaGCGGATCTTCTTCGGTTTGGTGGGGCTGCTCACC +
Preference number: 6 (lower is better)
Translates to: PSTSSPPGQAAG*RIFFGLVGLLT
Trigger: GGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp AGACAGGGAAACACAACTGGCCCTTGGTTACGCCAATaGCGTTGCAGCGCGCGGGGCACAACCCTCGGGGTT +
Preference number: 6 (lower is better)
Translates to: RQGNTTGPWLRQ*RCSARGTTLGV
Trigger: AACCCCGAGGGTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTTCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS GCA 72 bp TGGAGCACCATCCACCTCTTCTCCACCTGGACAGGCTaGTGGCTGCCGGATCTTCTTCGGTTTGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: WSTIHLFSTWTG*WLPDLLRFGGA
Trigger: AGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS GCA 72 bp GAGAGGAGCCTTCCGAGGGGTGCCTGGAAGTTCCCATaGTCCACTGGGGCAGAACTTGAGGTCCCAGATGCA +
Preference number: 6 (lower is better)
Translates to: ERSLPRGAWKFP*STGAELEVPDA
Trigger: TGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000470115.1
ENST00000622534.1
CDS GCA 72 bp TACTGTAGGTTCGCCGAGTTCGAGGGACGCTACGTATaGAGCGCCTACGCCCGGACACAGGCTTCCGCGTTA +
Preference number: 6 (lower is better)
Translates to: YCRFAEFEGRYV*SAYARTQASAL
Trigger: TAACGCGGAAGCCTGTGTCCGGGCGTAGGCGCTGCATACGTAGCGTCCCTCGAACTCGGCGAACCTACAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS GCA 72 bp GGAAACACAACTGGCCCTTGGTTACGCCAATGGCGTTaGAGCGCGCGGGGCACAACCCTCGGGGTTAAAGAG +
Preference number: 6 (lower is better)
Translates to: GNTTGPWLRQWR*SARGTTLGVKE
Trigger: CTCTTTAACCCCGAGGGTTGTGCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS CCA 72 bp AGCACCATCCACCTCTTCTCCACCTGGACAGGCTGCTaGCTGCCGGATCTTCTTCGGTTTGGTGGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: STIHLFSTWTGC*LPDLLRFGGAA
Trigger: AGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp CACTCCAAGGATCTGGTGTGGGCCAAGGCTAGGGAGTaGGCAGAAGGCGATGGCTGGTTGGAGAGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: HSKDLVWAKARE*AEGDGWLERSQ
Trigger: CTGGCTTCTCTCCAACCAGCCATCGCCTTCTGCCCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
ENST00000495298.1
CDS TCA 72 bp GTTGCTGAGCCAGCAGGGCCTCCGGATGGGGTAGACTaGATAGCAGTACTTTCCCGTCTGAGCAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: VAEPAGPPDGVD*IAVLSRLSRPE
Trigger: CTCTGGCCTGCTCAGACGGGAAAGTACTGCTATTCAGTCTACCCCATCCGGAGGCCCTGCTGGCTCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS GCA 72 bp TGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTaGATACGGTGGCCCAGTGGGGAGGCGAGTCCACGG +
Preference number: 6 (lower is better)
Translates to: WNIALKWARLSS*IRWPSGEASPR
Trigger: CCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS GCA 72 bp GTCGCCACCTCTGACTTCCCCAACAGGCAGCCAACTTaGCACGGGACAAAAGGACCTCGCCAAAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VATSDFPNRQPT*HGTKGPRQSPS
Trigger: GGAAGGACTTTGGCGAGGTCCTTTTGTCCCGTGGCAAGTTGGCTGCCTGTTGGGGAAGTCAGAGGTGGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457748.1
CDS CCA 72 bp GTGGGCTCGGCTTTCAAGCTGCATACGGTGGCCCAGTaGGGAGGCGAGTCCACGGACAAAATGGATTCGAAC +
Preference number: 6 (lower is better)
Translates to: VGSAFKLHTVAQ*GGESTDKMDSN
Trigger: GTTCGAATCCATTTTGTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CCA 72 bp GCATTGAAGTGGGCTCGGCTTTCAAGCTGCATACGGTaGCCCAGTGGGGAGGCGAGTCCACGGACAAAATGG +
Preference number: 6 (lower is better)
Translates to: ALKWARLSSCIR*PSGEASPRTKW
Trigger: CCATTTTGTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CAA 90 bp GAGAAGCCAGGCCGTCTAGTGGGGGAGGATGGTTGGAACATAGCATaGAAGTGGGCTCGGCTTTCAAGCTGCATACGGTGGCCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: EKPGRLVGEDGWNIA*KWARLSSCIRWPSG
Trigger: CCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CAA 90 bp GCCCCCTATACATCCCTCCAACAAAGTGAGTTGCCTCCGACGGAGTaGAAGTCGCCACCTCTGACTTCCCCAACAGGCAGCCAACTTGCC +
Preference number: 6 (lower is better)
Translates to: APYTSLQQSELPPTE*KSPPLTSPTGSQLA
Trigger: GGCAAGTTGGCTGCCTGTTGGGGAAGTCAGAGGTGGCGACTTCAACTCCGTCGGAGGCAACTCACTTTGTTGGAGGGATGTATAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359541.6
ENST00000457748.1
CDS TCA 72 bp GCAGGCAGGGCTGTTGAGAGCTCTTCAGCCAGTTCCTaGAGATACAGAAGTGCCACTTGGGCAGCCCTTCGG +
Preference number: 6 (lower is better)
Translates to: AGRAVESSSASS*RYRSATWAALR
Trigger: CCGAAGGGCTGCCCAAGTGGCACTTCTGTATCTTCAGGAACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp TTCATCCCGTGGAGCACCATCCACCTCTTCTCCACCTaGACAGGCTGCTGGCTGCCGGATCTTCTTCGGTTT +
Preference number: 6 (lower is better)
Translates to: FIPWSTIHLFST*TGCWLPDLLRF
Trigger: AAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCACGGGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp GGCCATTTGTTCTTGACCGACTTCACTCCAAGGATCTaGTGTGGGCCAAGGCTAGGGAGTGGGCAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: GHLFLTDFTPRI*CGPRLGSGQKA
Trigger: CGCCTTCTGCCCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
ENST00000495298.1
CDS CCA 72 bp GACAAAAGGACTAGACAGGGAAACACAACTGGCCCTTaGTTACGCCAATGGCGTTGCAGCGCGCGGGGCACA +
Preference number: 6 (lower is better)
Translates to: DKRTRQGNTTGP*LRQWRCSARGT
Trigger: TGTGCCCCGCGCGCTGCAACGCCATTGGCGTAACCAAGGGCCAGTTGTGTTTCCCTGTCTAGTCCTTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS CAA 90 bp AAGGCCCCCAGTTCCTATGGCTCTGTGCATAGGGGCCATTTGTTCTaGACCGACTTCACTCCAAGGATCTGGTGTGGGCCAAGGCTAGGG +
Preference number: 6 (lower is better)
Translates to: KAPSSYGSVHRGHLF*TDFTPRIWCGPRLG
Trigger: CCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAATGGCCCCTATGCACAGAGCCATAGGAACTGGGGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
ENST00000495298.1
CDS TCA 72 bp TGCCTGGAAGTTCCCATGCTCCACTGGGGCAGAACTTaGGGTCCCAGATGCAGCCGTTGTCACAAGCAATCC +
Preference number: 6 (lower is better)
Translates to: CLEVPMLHWGRT*GPRCSRCHKQS
Trigger: GGATTGCTTGTGACAACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000470115.1
ENST00000622534.1
CDS CCA 72 bp CTGGAGCAGCCCAGGACCCGAATGAAGCTGGCTCAGTaGGTGTGTCTCATTCATGTCAGGGCTGGAGAAAAG +
Preference number: 6 (lower is better)
Translates to: LEQPRTRMKLAQ*VCLIHVRAGEK
Trigger: CTTTTCTCCAGCCCTGACATGAATGAGACACACCCACTGAGCCAGCTTCATTCGGGTCCTGGGCTGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000470115.1
ENST00000493511.1
ENST00000622534.1
CDS CCA 72 bp GGAGAGAAGCCAGGCCGTCTAGTGGGGGAGGATGGTTaGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGC +
Preference number: 6 (lower is better)
Translates to: GEKPGRLVGEDG*NIALKWARLSS
Trigger: GCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CCA 72 bp TTTGTTCTTGACCGACTTCACTCCAAGGATCTGGTGTaGGCCAAGGCTAGGGAGTGGGCAGAAGGCGATGGC +
Preference number: 6 (lower is better)
Translates to: FVLDRLHSKDLV*AKAREWAEGDG
Trigger: GCCATCGCCTTCTGCCCACTCCCTAGCCTTGGCCCACACCAGATCCTTGGAGTGAAGTCGGTCAAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000431028.5
ENST00000454704.5
ENST00000495298.1
CDS CAA 72 bp ACATCCCTCCAACAAAGTGAGTTGCCTCCGACGGAGTaGAAGTCGCCACCTCTGACTTCCCCAACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: TSLQQSELPPTE*KSPPLTSPTGS
Trigger: GCTGCCTGTTGGGGAAGTCAGAGGTGGCGACTTCAACTCCGTCGGAGGCAACTCACTTTGTTGGAGGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359541.6
ENST00000457748.1
CDS CAA 90 bp GGGTGCTTCGGGGCACTACAGGCTCAGGTTCAGATGAGCTCTCACTaGGGCCCTCACTTTCTTCCACATCTTCAGCCTCAACCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GCFGALQAQVQMSSH*GPHFLPHLQPQPGE
Trigger: TTCTCCAGGTTGAGGCTGAAGATGTGGAAGAAAGTGAGGGCCCAAGTGAGAGCTCATCTGAACCTGAGCCTGTAGTGCCCCGAAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CAA 90 bp ATGGCTGGTTGGAGAGAAGCCAGGCCGTCTAGTGGGGGAGGATGGTaGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAGCTGCATACG +
Preference number: 6 (lower is better)
Translates to: MAGWREARPSSGGGW*EHSIEVGSAFKLHT
Trigger: CGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCCAACCAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS TCA 72 bp TTCGAAGATGGCGCCGCCTGTCTGGTCGCGGTCTTATaGCGAAATCTTGTTAGCTGCTCTTCACTGACGCCC +
Preference number: 6 (lower is better)
Translates to: FEDGAACLVAVL*RNLVSCSSLTP
Trigger: GGGCGTCAGTGAAGAGCAGCTAACAAGATTTCGTCATAAGACCGCGACCAGACAGGCGGCGCCATCTTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS GCA 72 bp GTCGCCACCTCTGACTTCCCCAACAGGCAGCCAACTTaGCACGGGACAAAAGGACTAGACAGGGAAACACAA +
Preference number: 6 (lower is better)
Translates to: VATSDFPNRQPT*HGTKGLDRETQ
Trigger: TTGTGTTTCCCTGTCTAGTCCTTTTGTCCCGTGGCAAGTTGGCTGCCTGTTGGGGAAGTCAGAGGTGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359541.6
CDS CAA 72 bp GCTAAGGCACTGACCACACTCAGAGGGGTCTGTAGCTaGCATAGACCCCACCTGCAGAGTTGCCACACATTG +
Preference number: 6 (lower is better)
Translates to: AKALTTLRGVCS*HRPHLQSCHTL
Trigger: CAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCTGAGTGTGGTCAGTGCCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000622534.1
CDS CAA 72 bp TGGAGAGAAGCCAGGCCGTCTAGTGGGGGAGGATGGTaGGAACATAGCATTGAAGTGGGCTCGGCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: WREARPSSGGGW*EHSIEVGSAFK
Trigger: CTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000495298.1
CDS CAA 72 bp ATGGCTGCCCCCTATACATCCCTCCAACAAAGTGAGTaGCCTCCGACGGAGTTGAAGTCGCCACCTCTGACT +
Preference number: 6 (lower is better)
Translates to: MAAPYTSLQQSE*PPTELKSPPLT
Trigger: AGTCAGAGGTGGCGACTTCAACTCCGTCGGAGGCAACTCACTTTGTTGGAGGGATGTATAGGGGGCAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359541.6
ENST00000457748.1
CDS CAA 90 bp CCAGGCCAGGCTAAGGCACTGACCACACTCAGAGGGGTCTGTAGCTaGCATAGACCCCACCTGCAGAGTTGCCACACATTGTACCTTATA +
Preference number: 6 (lower is better)
Translates to: PGQAKALTTLRGVCS*HRPHLQSCHTLYLI
Trigger: TATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000622534.1
CDS TCA 72 bp CGTTTCTTAGGCATGGGGGTGGACAGAGGGTTGGATTaGTCTAAGAGACCAGGAACCAGTGGGGCTGATGGA +
Preference number: 6 (lower is better)
Translates to: RFLGMGVDRGLD*SKRPGTSGADG
Trigger: TCCATCAGCCCCACTGGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCCCCATGCCTAAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS TCA 72 bp CAAAATGGCTGCCCCCTATACATCCCTCCAACAAAGTaGGTTGCCTCCGACGGAGTTGAAGTCGCCACCTCT +
Preference number: 6 (lower is better)
Translates to: QNGCPLYIPPTK*VASDGVEVATS
Trigger: AGAGGTGGCGACTTCAACTCCGTCGGAGGCAACTCACTTTGTTGGAGGGATGTATAGGGGGCAGCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359541.6
ENST00000457748.1
CDS CCA 72 bp ATCTGGCTGTTCCAGTCTGGAGAGGCTTTCCTGCTCTaGAGGGAGCCTCCTCTGATCAGGAGAATCCTCAAA +
Preference number: 6 (lower is better)
Translates to: IWLFQSGEAFLL*REPPLIRRILK
Trigger: TTTGAGGATTCTCCTGATCAGAGGAGGCTCCCTCCAGAGCAGGAAAGCCTCTCCAGACTGGAACAGCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000457748.1
ENST00000622534.1
CDS CAA 72 bp GGGGCACTACAGGCTCAGGTTCAGATGAGCTCTCACTaGGGCCCTCACTTTCTTCCACATCTTCAGCCTCAA +
Preference number: 6 (lower is better)
Translates to: GALQAQVQMSSH*GPHFLPHLQPQ
Trigger: TTGAGGCTGAAGATGTGGAAGAAAGTGAGGGCCCAAGTGAGAGCTCATCTGAACCTGAGCCTGTAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CAA 90 bp CAGGGGGCCTCTTTGGAGATTGAGATTCTGGCCGATCTAGGTCTTTaGACAACTTCAGCAGCAGCAGCTCTGCCTTGGACTTTCGACCTC +
Preference number: 6 (lower is better)
Translates to: QGASLEIEILADLGL*TTSAAAALPWTFDL
Trigger: GAGGTCGAAAGTCCAAGGCAGAGCTGCTGCTGCTGAAGTTGTCAAAAGACCTAGATCGGCCAGAATCTCAATCTCCAAAGAGGCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS CCA 72 bp TCCGGAAGTCTAAGTTCGAAGATGGCGCCGCCTGTCTaGTCGCGGTCTTATGACGAAATCTTGTTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SGSLSSKMAPPV*SRSYDEILLAA
Trigger: AGCAGCTAACAAGATTTCGTCATAAGACCGCGACCAGACAGGCGGCGCCATCTTCGAACTTAGACTTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS TCA 72 bp GTGAGATGGAGGCACTTCCAAACAGGAGCCATGATATaGTTTGGTAAGCCATTGGGAGCCATTCCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: VRWRHFQTGAMI*FGKPLGAIPRQ
Trigger: CTGCCGAGGAATGGCTCCCAATGGCTTACCAAATCATATCATGGCTCCTGTTTGGAAGTGCCTCCATCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000480989.1
ENST00000622534.1
CDS TCA 72 bp GCAGAGACAAGGAAATGGCTGTTAGCTTTGCACCATTaGAGGGTACGCACAGCCTGGTCATGGGCTAGGAAA +
Preference number: 6 (lower is better)
Translates to: AETRKWLLALHH*RVRTAWSWARK
Trigger: TTTCCTAGCCCATGACCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000415683.2
ENST00000454704.5
CDS GCA 72 bp GCACAAGGTAAACACGTGTGCTTGGTCCGGAGTCGGTaGCGGGCTAGTTTTCTCTTAGACTCTGTATTCCAT +
Preference number: 6 (lower is better)
Translates to: AQGKHVCLVRSR*RASFLLDSVFH
Trigger: ATGGAATACAGAGTCTAAGAGAAAACTAGCCCGGCACCGACTCCGGACCAAGCACACGTGTTTACCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264720.7
ENST00000423998.1
CDS GCA 72 bp GGGGTCTGTAGCTTGCATAGACCCCACCTGCAGAGTTaGCACACATTGTACCTTATATATGGCAGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: GVCSLHRPHLQS*HTLYLIYGRLH
Trigger: GTGAAGCCTGCCATATATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCAAGCTACAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000622534.1
CDS GCA 72 bp TGCTTATCAAACTGGGAAGGTGCTCTTATTTACAGCTaGTGGCTCAAGAATCATGTGCTGGGCTGGGCGCAG +
Preference number: 6 (lower is better)
Translates to: CLSNWEGALIYS*WLKNHVLGWAQ
Trigger: CTGCGCCCAGCCCAGCACATGATTCTTGAGCCAGCAGCTGTAAATAAGAGCACCTTCCCAGTTTGATAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS CCA 72 bp TTATCAAACTGGGAAGGTGCTCTTATTTACAGCTGCTaGCTCAAGAATCATGTGCTGGGCTGGGCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LSNWEGALIYSC*LKNHVLGWAQW
Trigger: CCACTGCGCCCAGCCCAGCACATGATTCTTGAGCCAGCAGCTGTAAATAAGAGCACCTTCCCAGTTTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS CCA 72 bp GGGAGACCTGACACTAGTTTGTACTCTACCAGAATTTaGGAGGGCATGTGGGTTAGGATCCAACAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRPDTSLYSTRI*EGMWVRIQQLL
Trigger: CAGCAGCTGTTGGATCCTAACCCACATGCCCTCCCAAATTCTGGTAGAGTACAAACTAGTGTCAGGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484680.1
ENST00000495298.1
CDS TCA 72 bp CGGAAGCCTCTGCACTGGTCATTTCTGAAGAGGTCTTaGCATCAAGCTGATTTAGCACCTCTTGTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RKPLHWSFLKRS*HQADLAPLVQE
Trigger: CTCCTGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCAGAGGCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000423998.1
ENST00000457748.1
ENST00000622534.1
CDS TCA 72 bp ATGAGGACTGAATGGGCGCTCCACCCAGAGCCAGTATaGACTGGCTCAAGCAAGAGCCTGAATATCAAAAAC +
Preference number: 6 (lower is better)
Translates to: MRTEWALHPEPV*TGSSKSLNIKN
Trigger: GTTTTTGATATTCAGGCTCTTGCTTGAGCCAGTTCATACTGGCTCTGGGTGGAGCGCCCATTCAGTCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493511.1
CDS GCA 72 bp CACTCAGAGGGGTCTGTAGCTTGCATAGACCCCACCTaGAGAGTTGCCACACATTGTACCTTATATATGGCA +
Preference number: 6 (lower is better)
Translates to: HSEGSVACIDPT*RVATHCTLYMA
Trigger: TGCCATATATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000622534.1
CDS TCA 72 bp TTATGGGTTCGTAAGGACGTCGAAGGTCCCAGAATTTaGTTTTCCGGTCACTCCCCGCAGAGACAAGGAAAT +
Preference number: 6 (lower is better)
Translates to: LWVRKDVEGPRI*FSGHSPQRQGN
Trigger: ATTTCCTTGTCTCTGCGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCGACGTCCTTACGAACCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000415683.2
ENST00000454704.5
CDS GCA 72 bp CCCCGTGAAGAAGGACACATCCCAGCGCTCTGGATGTaGTGTGATCGAGCTAAATCTAGAGAAAAATCAAAG +
Preference number: 6 (lower is better)
Translates to: PREEGHIPALWM*CDRAKSREKSK
Trigger: CTTTGATTTTTCTCTAGATTTAGCTCGATCACAGCACATCCAGAGCGCTGGGATGTGTCCTTCTTCACGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493511.1
CDS CAA 72 bp TCTTTGGAGATTGAGATTCTGGCCGATCTAGGTCTTTaGACAACTTCAGCAGCAGCAGCTCTGCCTTGGACT +
Preference number: 6 (lower is better)
Translates to: SLEIEILADLGL*TTSAAAALPWT
Trigger: AGTCCAAGGCAGAGCTGCTGCTGCTGAAGTTGTCAAAAGACCTAGATCGGCCAGAATCTCAATCTCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000622534.1
CDS TCA 72 bp GCACTGGTCATTTCTGAAGAGGTCTTGACATCAAGCTaGTTTAGCACCTCTTGTCCAGGAGAGTCTACCACA +
Preference number: 6 (lower is better)
Translates to: ALVISEEVLTSS*FSTSCPGESTT
Trigger: TGTGGTAGACTCTCCTGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAATGACCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000423998.1
ENST00000457748.1
ENST00000622534.1
CDS TCA 72 bp GAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGGCTGG +
Preference number: 6 (lower is better)
Translates to: EAEEWSGPSGLS*YGIRSALYIGW
Trigger: CCAGCCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495298.1
CDS CCA 72 bp AAGCAACTTCAGTCTCACGAATTACTATCACCCTCGTaGGCATACATGATGGTTACCCTTATGAATAGCCTC +
Preference number: 6 (lower is better)
Translates to: KQLQSHELLSPS*AYMMVTLMNSL
Trigger: GAGGCTATTCATAAGGGTAACCATCATGTATGCCCACGAGGGTGATAGTAATTCGTGAGACTGAAGTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457098.5
CDS CCA 72 bp AGGGAAGATTATATACAACTCTGTGCTAAGATTTTCTaGGATATCAGGGCCGGGAGACCTGACACTAGTTTG +
Preference number: 6 (lower is better)
Translates to: REDYIQLCAKIF*DIRAGRPDTSL
Trigger: CAAACTAGTGTCAGGTCTCCCGGCCCTGATATCCCAGAAAATCTTAGCACAGAGTTGTATATAATCTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484680.1
ENST00000495298.1
CDS TCA 72 bp GAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGCAGAA +
Preference number: 6 (lower is better)
Translates to: EAEEWSGPSGLS*YGIRSALYIAE
Trigger: TTCTGCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415683.2
CDS GCA 72 bp ATGAGGGTTGAGGGAAAAACAGTTGGTAGGAACAAGTaGTTATCAAACTGGGAAGGTGCTCTTATTTACAGC +
Preference number: 6 (lower is better)
Translates to: MRVEGKTVGRNK*LSNWEGALIYS
Trigger: GCTGTAAATAAGAGCACCTTCCCAGTTTGATAAGCACTTGTTCCTACCAACTGTTTTTCCCTCAACCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423998.1
CDS TCA 72 bp GAAGCAGAAGAATGGTCTGGACCTTCAGGACTGTCCTaGTACGGTATCAGATCTGCTTTATATATAGGAAAT +
Preference number: 6 (lower is better)
Translates to: EAEEWSGPSGLS*YGIRSALYIGN
Trigger: ATTTCCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000457098.5
CDS CAA 90 bp AATACCTCCCCCTCCAATCACTGCCCTATCAGCATCTTAAAAGATTaGTGTTTCAACCACTATAATGACTTCTTCACCTTCTGCTCTACT +
Preference number: 6 (lower is better)
Translates to: NTSPSNHCPISILKD*CFNHYNDFFTFCST
Trigger: AGTAGAGCAGAAGGTGAAGAAGTCATTATAGTGGTTGAAACACAAATCTTTTAAGATGCTGATAGGGCAGTGATTGGAGGGGGAGGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480989.1
CDS CAA 90 bp CTGTTAGATGTTCGTATACGTACAAATCTTCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGTGCCATATCTGGTAATATAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LLDVRIRTNLRSTGR*TFIGFSAISGNIAA
Trigger: TGCTGCTATATTACCAGATATGGCACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCGAAGATTTGTACGTATACGAACATCTAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415683.2
ENST00000484680.1
CDS GCA 72 bp TTTATCTTCTTTGGCAATACCTCCCCCTCCAATCACTaGCCTATCAGCATCTTAAAAGATTTGTGTTTCAAC +
Preference number: 6 (lower is better)
Translates to: FIFFGNTSPSNH*PISILKDLCFN
Trigger: GTTGAAACACAAATCTTTTAAGATGCTGATAGGGCAGTGATTGGAGGGGGAGGTATTGCCAAAGAAGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480989.1
CDS CAA 72 bp GTTCGTATACGTACAAATCTTCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGTGCCATATCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: VRIRTNLRSTGR*TFIGFSAISGN
Trigger: ATTACCAGATATGGCACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCGAAGATTTGTACGTATACGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415683.2
ENST00000484680.1
CDS CAA 72 bp CCCTCCAATCACTGCCCTATCAGCATCTTAAAAGATTaGTGTTTCAACCACTATAATGACTTCTTCACCTTC +
Preference number: 6 (lower is better)
Translates to: PSNHCPISILKD*CFNHYNDFFTF
Trigger: GAAGGTGAAGAAGTCATTATAGTGGTTGAAACACAAATCTTTTAAGATGCTGATAGGGCAGTGATTGGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480989.1
CDS CAA 90 bp ATCAGATCTGCTTTATATATAGGAAATCTTCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGTGCCATATCTGGTAATATAGCAGCA +
Preference number: 6 (lower is better)
Translates to: IRSALYIGNLRSTGR*TFIGFSAISGNIAA
Trigger: TGCTGCTATATTACCAGATATGGCACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCGAAGATTTCCTATATATAAAGCAGATCTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000457098.5
CDS CAA 72 bp GCTTTATATATAGGAAATCTTCGCTCTACAGGTCGCTaGACATTTATTGGATTCAGTGCCATATCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: ALYIGNLRSTGR*TFIGFSAISGN
Trigger: ATTACCAGATATGGCACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCGAAGATTTCCTATATATAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264720.7
ENST00000359541.6
ENST00000454704.5
ENST00000457098.5