RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF3C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000077235

Ensembl transcript IDs: ENST00000356183.9, ENST00000561623.5, ENST00000562609.2, ENST00000564664.5, ENST00000564747.1, ENST00000566779.1, ENST00000567806.1, ENST00000567843.1, ENST00000568569.1, ENST00000569394.5, ENST00000569653.1, ENST00000570129.1, ENST00000571886.1

Found 1129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTaGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGG +
Preference number: 1 (lower is better)
Translates to: ACQVTHKAEKGAAPL*VVQSQPGVGMSCLR
Trigger: CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 90 bp GGATGGGCAGGTCGGGGAGCCCCTCTTTCCAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCC +
Preference number: 1 (lower is better)
Translates to: GWAGRGAPLSRVPVQ*ETCQSVTLAKAPVP
Trigger: GGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCCCCGACCTGCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR GCA 90 bp GAGGCTGCGAAGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTaGTTCCTTTGCTCCTCTTTACAGACAGGGCGTGGCTCCACCTCG +
Preference number: 1 (lower is better)
Translates to: EAAKVPGSYTLSWPQ*FLCSSLQTGRGSTS
Trigger: CGAGGTGGAGCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 90 bp TGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAGGCGGGGCAAACTCTGGAGACCCAG +
Preference number: 1 (lower is better)
Translates to: WALKEPGDPAEMARV*NVRCAQAGQTLETQ
Trigger: CTGGGTCTCCAGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 90 bp CCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCC +
Preference number: 1 (lower is better)
Translates to: PSVWLTRRRLTKLLF*HSMKAFTRTWSLYS
Trigger: GGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR TCA 90 bp AAGGAGGTAAGGGGCTGCAGGAAACCCAAGCCGGCATCTTGCACATaGGGCTGCGAAGGTCCCTGGCTCCTACACGCTTTCATGGCCACA +
Preference number: 1 (lower is better)
Translates to: KEVRGCRKPKPASCT*GCEGPWLLHAFMAT
Trigger: TGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCCTCATGTGCAAGATGCCGGCTTGGGTTTCCTGCAGCCCCTTACCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 90 bp GATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTaGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGC +
Preference number: 1 (lower is better)
Translates to: DPYSARCIPQGPSSW*HLGTQGARRSCRDG
Trigger: GCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 90 bp ATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGGCACCTaGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTC +
Preference number: 1 (lower is better)
Translates to: ILQGVSHKALPLGGT*ALKEPGDPAEMARV
Trigger: GACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 90 bp ACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTaGTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGAT +
Preference number: 1 (lower is better)
Translates to: TDPYSARCIPQGPSS*WHLGTQGARRSCRD
Trigger: ATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 90 bp CTTGCACATGAGGCTGCGAAGGTCCCTGGCTCCTACACGCTTTCATaGCCACAGTGCTTCCTTTGCTCCTCTTTACAGACAGGGCGTGGC +
Preference number: 1 (lower is better)
Translates to: LAHEAAKVPGSYTLS*PQCFLCSSLQTGRG
Trigger: GCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCCTCATGTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 90 bp TCAGGCTGGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTaGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCACGTAAAA +
Preference number: 1 (lower is better)
Translates to: SGWSNLPAARILSKN*NDSVQMVLGNRHVK
Trigger: TTTTACGTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR TCA 90 bp CTGGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCTTGGAAATCGCCACGTAAAAATCCT +
Preference number: 1 (lower is better)
Translates to: LVQLAGSPHSVQKLE*LRADGAWKSPRKNP
Trigger: AGGATTTTTACGTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR TCA 90 bp AAAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTaGAAGAGAAACGATCAGGCTGGTCCAACTTGCCGGCAGCCCGCA +
Preference number: 1 (lower is better)
Translates to: KRPPCRLWARYYPGL*KRNDQAGPTCRQPA
Trigger: TGCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR GCA 90 bp GGAATGACTGGTAGGACTTCATCTGACTGTCTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAAGCACCAGAAAGTGGATGTCATCCA +
Preference number: 1 (lower is better)
Translates to: GMTGRTSSDCLRGPA*SGSGSEAPESGCHP
Trigger: TGGATGACATCCACTTTCTGGTGCTTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAGTCCTACCAGTCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR GCA 90 bp TTGATGACCTCATTCTCCACCATTGAGCTGTCTACCACGATGATCTaGTCCGGGATCCTGACATCCACAGAAATGAGGCCCAGAGAGAAG +
Preference number: 1 (lower is better)
Translates to: LMTSFSTIELSTTMI*SGILTSTEMRPREK
Trigger: CTTCTCTCTGGGCCTCATTTCTGTGGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAGGTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR GCA 90 bp TCCAAAGACTCTTCAAACGTGGCATGCAAAATGTCCCGTACCACCTaGCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATTG +
Preference number: 1 (lower is better)
Translates to: SKDSSNVACKMSRTT*QVTNGPFTLVLRTL
Trigger: CAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTACGGGACATTTTGCATGCCACGTTTGAAGAGTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR CCA 90 bp GTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTaGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAAT +
Preference number: 1 (lower is better)
Translates to: VGSLLSWSLKEKRSG*SNLPAARILSKNWN
Trigger: ATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 90 bp TCCAGTGAAAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTaGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCGGCA +
Preference number: 1 (lower is better)
Translates to: SSEKATMSFVGSLLS*SLKEKRSGWSNLPA
Trigger: TGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTTTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTGGCAGGCGGTGGCTaGGAGGGAGGGGACGCCCAC +
Preference number: 2 (lower is better)
Translates to: RSALGGSVPARGWDVLPAVAGGG*EGGDAH
Trigger: GTGGGCGTCCCCTCCCTCCCAGCCACCGCCTGCCAC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCAGGCAGGAGTGGTGTaGCAGGCGGTGGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RSALGGSVPARGWDVLPAQAGVV*QAVAGR
Trigger: CCTCCCAGCCACCGCCTGCCACACCACTCCTGCCTG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGTGGCAGGCGGTGGCTaGGAGGGAGGGGACGCCCAC +
Preference number: 2 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLVAGGG*EGGDAH
Trigger: GTGGGCGTCCCCTCCCTCCCAGCCACCGCCTGCCAC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTGTGGCAGGCGGTGGCTaGGAGGGAGGGGACGCCCAC +
Preference number: 2 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAVAGGG*EGGDAH
Trigger: GTGGGCGTCCCCTCCCTCCCAGCCACCGCCTGCCAC...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAGGCCCAGAAGAGCCTaGGGGATGGGCAGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRPRRA*GMGRSG
Trigger: CCCCGACCTGCCCATCCCCCAGGCTCTTCTGGGCCT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGGCCCAGAAGAGCCTaGGGGATGGGCAGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRPRRA*GMGRSG
Trigger: CCCCGACCTGCCCATCCCCCAGGCTCTTCTGGGCCT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR GCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGGGGGTTGGGATGTCCTaGCTGCGGAGGGGCCACAGC +
Preference number: 2 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQGVGMS*LRRGHS
Trigger: GCTGTGGCCCCTCCGCAGGCAGGACATCCCAACCCC...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GTWALKEPGDPAEMARVWSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: FLACKESPARLRDTDSQPKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR TCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 2 (lower is better)
Translates to: RSALGGSVPARGWDVLPAKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCCAGGCAGGAGTGGTGTaGCAGGCGGTGGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLQAGVV*QAVAGR
Trigger: CCTCCCAGCCACCGCCTGCCACACCACTCCTGCCTG...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCCTCTTGGTGGCACCTaGGCACTCAAGGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLPLGGT*ALKEPG
Trigger: TCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CAA 90 bp GCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGA +
Preference number: 2 (lower is better)
Translates to: ARFFLGPSVWLTRRR*TKLLFWHSMKAFTR
Trigger: TCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR TCA 90 bp GAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACGCGGAAAGTCTGGAATaGCTGGTAGGACTTCATCTG +
Preference number: 2 (lower is better)
Translates to: EGPVLLGAQRVVDPAPVDAESLE*LVGLHL
Trigger: CAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGC...GTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR CCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGCCCTTCCTCTTGGTaGCACCTGGGCACTCAAGGA +
Preference number: 2 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVGPSSW*HLGTQG
Trigger: TCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCC...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR TCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 2 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR-3UTR GCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCACCGATCCCTATTCTaGAAGGTGTATCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: RSALGGSVPARGWDVLPAHRSLF*KVYPTR
Trigger: CCTTGTGGGATACACCTTGCAGAATAGGGATCGGTG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR GCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCACCGATCCCTATTCTaGAAGGTGTATCCCACAAGG +
Preference number: 2 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRHRSLF*KVYPTR
Trigger: CCTTGTGGGATACACCTTGCAGAATAGGGATCGGTG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAGGCGGGGCAAACTCTaGAGACCCAGAGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRRGKL*RPRDKK
Trigger: CTTCTTGTCTCTGGGTCTCCAGAGTTTGCCCCGCCT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAG +
Preference number: 2 (lower is better)
Translates to: APLWVVQSQPGVGMSCLREMARV*NVRCAQ
Trigger: CTGTGCACACCTCACATTCCAGACTCTAGCCATCTC...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAG +
Preference number: 2 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLEMARV*NVRCAQ
Trigger: CTGTGCACACCTCACATTCCAGACTCTAGCCATCTC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR GCA 90 bp GGACGGCCACACAATTTCCTCCAGGGCCGTCCAGTGAAAAGGCCACCATGTCGTCAGGCTGGTCCAACTTaGCGGCAGCCCGCATTCTGT +
Preference number: 2 (lower is better)
Translates to: GRPHNFLQGRPVKRPPCRQAGPT*RQPAFC
Trigger: ACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG...ACGACATGGTGGCCTTTTCACTGGACGGCCCTGGAGGAAATTGTGTGGCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RSALGGSVPARGWDVLPARVPVQ*ETCQSV
Trigger: CACAGACTGACACGTTTCCCACTGTACTGGAACTCT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CAA 90 bp GAAGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTaGCTCCTCTTTACAGACAGGGCGTGGCTCCACCTCGGAGTACCC +
Preference number: 2 (lower is better)
Translates to: EGPWLLHAFMATVLP*LLFTDRAWLHLGVP
Trigger: GGGTACTCCGAGGTGGAGCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 2 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: APLSRVPVQWETCQSVTLKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR CAA 90 bp TACCACGAAGGAGGTAAGGGGCTGCAGGAAACCCAAGCCGGCATCTaGCACATGAGGCTGCGAAGGTCCCTGGCTCCTACACGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: YHEGGKGLQETQAGI*HMRLRRSLAPTRFH
Trigger: ATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCCTCATGTGCAAGATGCCGGCTTGGGTTTCCTGCAGCCCCTTACCTCCTTCGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGRVPVQ*ETCQSV
Trigger: CACAGACTGACACGTTTCCCACTGTACTGGAACTCT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
3UTR-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAAGGCCCTTCCTCTTaGTGGCACCTGGGCACTCAA +
Preference number: 2 (lower is better)
Translates to: SSFLACKESPARLRDTDSQGPSS*WHLGTQ
Trigger: TTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTGGAATGTGAGGTGTaGACAGGCGGGGCAAACTCT +
Preference number: 2 (lower is better)
Translates to: GLFISGLQGITSQAEGHGLECEV*TGGANS
Trigger: AGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAG...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR CCA 90 bp CAGGCTGGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATGACTGGCTGCGAAGGTCCCTaGCTCCTACACGCTTTCATG +
Preference number: 2 (lower is better)
Translates to: QAGPTCRQPAFCPKTGMTGCEGP*LLHAFM
Trigger: CATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCC...AGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR GCA 90 bp GGCATGCAAAATGTCCCGTACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGA +
Preference number: 2 (lower is better)
Translates to: GMQNVPYHLPGDKWALHLSSPSS*IDQVTR
Trigger: TCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCT...AAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTACGGGACATTTTGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR GCA 90 bp GAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAATGACTGGTAGGATGTCCCGTACCACCTaGCAGGTGACAAATGGGCCC +
Preference number: 2 (lower is better)
Translates to: ERGPCTPDRGGKSGMTGRMSRTT*QVTNGP
Trigger: GGGCCCATTTGTCACCTGGCAGGTGGTACGGGACAT...CCTACCAGTCATTCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGAGGCGGGGCAAACTCTaGAGACCCAGAGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVRRGKL*RPRDKK
Trigger: CTTCTTGTCTCTGGGTCTCCAGAGTTTGCCCCGCCT...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR-3UTR TCA 90 bp GCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGCCTTCACCTTGGTGTTaGGGACATTGCTGGCAATGC +
Preference number: 2 (lower is better)
Translates to: ALHEGLHKNVVLVLPIEAPSPWC*GHCWQC
Trigger: GCATTGCCAGCAATGTCCTCAACACCAAGGTGAAGG...CGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR GCA 90 bp GGACGGCCACACAATTTCCTCCAGGGCCGTCCAGTGAAAAGGCCACCATGTCGTACTGGAATGACTCCGTaGAGATGGTGCTTGGAAATC +
Preference number: 2 (lower is better)
Translates to: GRPHNFLQGRPVKRPPCRTGMTP*RWCLEI
Trigger: GATTTCCAAGCACCATCTGCACGGAGTCATTCCAGT...ACGACATGGTGGCCTTTTCACTGGACGGCCCTGGAGGAAATTGTGTGGCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CAA 90 bp GAAAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTaGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCGGCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: EKATMSFVGSLLSWS*KEKRSGWSNLPAAR
Trigger: GCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp TCTGGAATGACTGGTAGGACTTCATCTGACTGTCTGAGAGGGCCAGCGTGCTCTCTGCCAGGTGACAAATaGGCCCTTCACCTTGGTGTT +
Preference number: 2 (lower is better)
Translates to: SGMTGRTSSDCLRGPACSLPGDK*ALHLGV
Trigger: AACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAG...AGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAGTCCTACCAGTCATTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR TCA 90 bp AGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAAGGCCTGTGGGTTTTTaGCTATGTAGCGAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RPSQERGPCTPDRGGKSGRPVGF*LCSELF
Trigger: GAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCT...TCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR-3UTR CCA 90 bp ACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCG +
Preference number: 2 (lower is better)
Translates to: TKLLFWHSMKAFTRTWSLVEIGL*VFDYVA
Trigger: CGCTACATAGTCAAAAACCCACAGGCCTATCTCAAC...CAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR CAA 90 bp TTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTaGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATGACTCCGTG +
Preference number: 2 (lower is better)
Translates to: LLSWSLKEKRSGWSN*PAARILSKNWNDSV
Trigger: CACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR TCA 90 bp GTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCT +
Preference number: 2 (lower is better)
Translates to: VVCGLVIILVFERETIRLVQKLE*LRADGA
Trigger: AGCACCATCTGCACGGAGTCATTCCAGTTTTTGGAC...CAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp GTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGTCCTACACGCTTTCATaGCCACAGTGCTTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: VVCGLVIILVFERETIRLSYTLS*PQCFLC
Trigger: GCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGA...CAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CCA 90 bp AAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAATGACTCCGTGCAGATaGTGCTTGGAAATCGCCACG +
Preference number: 2 (lower is better)
Translates to: KGHHVVCGLVIILVFEREMTPCR*CLEIAT
Trigger: CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCAT...TTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 72 bp GTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTaGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCC +
Preference number: 3 (lower is better)
Translates to: VTHKAEKGAAPL*VVQSQPGVGMS
Trigger: GGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 72 bp GGTGTATCCCACAAGGCCCTTCCTCTTGGTGGCACCTaGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATG +
Preference number: 3 (lower is better)
Translates to: GVSHKALPLGGT*ALKEPGDPAEM
Trigger: CATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR TCA 72 bp CAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTaGGGTGTGCACAGGCGGGGCAAACTCTGGAGACCC +
Preference number: 3 (lower is better)
Translates to: QEILPRWLESGM*GVHRRGKLWRP
Trigger: GGGTCTCCAGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 72 bp TCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTaGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGC +
Preference number: 3 (lower is better)
Translates to: SARCIPQGPSSW*HLGTQGARRSC
Trigger: GCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CCA 72 bp TGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTCACAAGAACGTGGTCC +
Preference number: 3 (lower is better)
Translates to: WLTRRRLTKLLF*HSMKAFTRTWS
Trigger: GGACCACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR CCA 72 bp AAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAGGCGGGGCAAACTCTG +
Preference number: 3 (lower is better)
Translates to: KEPGDPAEMARV*NVRCAQAGQTL
Trigger: CAGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR GCA 72 bp AAGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTaGTTCCTTTGCTCCTCTTTACAGACAGGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: KVPGSYTLSWPQ*FLCSSLQTGRG
Trigger: GCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 72 bp TATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTaGTGGCACCTGGGCACTCAAGGAGCCAGGAGATCC +
Preference number: 3 (lower is better)
Translates to: YSARCIPQGPSS*WHLGTQGARRS
Trigger: GGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR TCA 72 bp CTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCTTGGAAATCGCCACGT +
Preference number: 3 (lower is better)
Translates to: LAGSPHSVQKLE*LRADGAWKSPR
Trigger: ACGTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR TCA 72 bp CAGGACGGCCACACAATTTCCTCCAGGGCCGTCCAGTaGAAAGGCCACCATGTCGTTTGTGGGCTCGTTATT +
Preference number: 3 (lower is better)
Translates to: QDGHTISSRAVQ*KGHHVVCGLVI
Trigger: AATAACGAGCCCACAAACGACATGGTGGCCTTTTCACTGGACGGCCCTGGAGGAAATTGTGTGGCCGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CAA 90 bp TTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCACGACCCAAGCCGGCATCTaGCACATGAGGCTGCGAAGG +
Preference number: 3 (lower is better)
Translates to: FCPKTGMTPCRWCLEIATTQAGI*HMRLRR
Trigger: CCTTCGCAGCCTCATGTGCAAGATGCCGGCTTGGGT...CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR GCA 72 bp GGTAGGACTTCATCTGACTGTCTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAAGCACCAGAAAGTGGA +
Preference number: 3 (lower is better)
Translates to: GRTSSDCLRGPA*SGSGSEAPESG
Trigger: TCCACTTTCTGGTGCTTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAGTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR CCA 72 bp TCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTaGAATGACTCCGTGCAGATGGTGCTTGGAAATCGC +
Preference number: 3 (lower is better)
Translates to: SNLPAARILSKN*NDSVQMVLGNR
Trigger: GCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR-3UTR CAA 90 bp AGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGACCCTTCACCTTGGTGTaGAGGACATTGCTGGCAATG +
Preference number: 3 (lower is better)
Translates to: RPSQERGPCTPDRGGKSGPFTLV*RTLLAM
Trigger: CATTGCCAGCAATGTCCTCAACACCAAGGTGAAGGG...TCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR GCA 72 bp TCATTCTCCACCATTGAGCTGTCTACCACGATGATCTaGTCCGGGATCCTGACATCCACAGAAATGAGGCCC +
Preference number: 3 (lower is better)
Translates to: SFSTIELSTTMI*SGILTSTEMRP
Trigger: GGGCCTCATTTCTGTGGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAATGGTGGAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR TCA 72 bp CCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTaGAAGAGAAACGATCAGGCTGGTCCAACTTGCCGG +
Preference number: 3 (lower is better)
Translates to: PCRLWARYYPGL*KRNDQAGPTCR
Trigger: CCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 72 bp TTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTaGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: LLSWSLKEKRSG*SNLPAARILSK
Trigger: TTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 72 bp AAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTaGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAAC +
Preference number: 3 (lower is better)
Translates to: KATMSFVGSLLS*SLKEKRSGWSN
Trigger: GTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CCA 72 bp TGCCAAAACTCGGTACTTATAGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCGAGCTCTTCGTCCAAC +
Preference number: 3 (lower is better)
Translates to: CQNSVLIVEIGL*VFDYVASSSSN
Trigger: GTTGGACGAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCTATCTCAACTATAAGTACCGAGTTTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564664.5
3UTR CAA 72 bp CCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTaGGGATGTCCTGCCTGCGGAGGGGCCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLRSGWFSPSQG*GCPACGGATAP
Trigger: GGGGGCTGTGGCCCCTCCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGAAGCTGATGCCCGGGTaGGTGGCGAGGGCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRKLMPG*VARARQ
Trigger: CTGGCGGGCCCTCGCCACGCACCCGGGCATCAGCTT...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAGCTGGCGCGCCTCTTaGTGCCCCGGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPASWRAS*CPGGCE
Trigger: CTCACAGCCCCCGGGGCACCAAGAGGCGCGCCAGCT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGGGTTGGGATGTCCTaGCTGCGGAGGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAGVGMS*LRRGHS
Trigger: GCTGTGGCCCCTCCGCAGGCAGGACATCCCAACCCC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTCTCACTGGCCCAGCTaGCGCGCCTCTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRSHWPS*RASWCP
Trigger: GGGGCACCAAGAGGCGCGCCAGCTGGGCCAGTGAGA...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCAGGCAGGAGTGGTGTaGCAGGCGGTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRQAGVV*QAVAGR
Trigger: CCTCCCAGCCACCGCCTGCCACACCACTCCTGCCTG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAAGCTGATGCCCGGGTaGGTGGCGAGGGCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLKLMPG*VARARQ
Trigger: CTGGCGGGCCCTCGCCACGCACCCGGGCATCAGCTT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGCTCCTTCTGCAGGCTaGCCTCCTCGTCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLAPSAG*PPRRCP
Trigger: AGGGCAGCGACGAGGAGGGCAGCCTGCAGAAGGAGC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGGGCGGGCACAGGGGTaGAGCGGAGCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLGRAQG*SGAGTS
Trigger: TGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGCCC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGAGCCCTCTGGAGGCTaGGCCTGGCCGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGEPSGG*AWPLSC
Trigger: GCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCCGGCTCCACAGCGCTaGCAGACACAGGCCATCGAG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRPAPQR*QTQAIE
Trigger: CTCGATGGCCTGTGTCTGCCAGCGCTGTGGAGCCGG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCCGGCTCCACAGCGCTaGCAGACACAGGCCATCGAG +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAPAPQR*QTQAIE
Trigger: CTCGATGGCCTGTGTCTGCCAGCGCTGTGGAGCCGG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCCAGGCAGAGCCCATaGCTACCAGGCGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAARQSP*LPGAQC
Trigger: ACACTGCGCGCCTGGTAGCCATGGGCTCTGCCTGGC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGGAGCGCTGGCCTCTTaGCAGGGGTCATCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLGALAS*QGSSGC
Trigger: GCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGAATCACCAGCCAGGCTaGGGGACACGGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRNHQPG*GTRTAS
Trigger: GCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATT...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGCTGGAGCTCCCCTTaGCACCTGGACCGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGRWSSP*HLDRPS
Trigger: GCTAGGCCGGTCCAGGTGGCAAGGGGAGCTCCAGCG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCGCTGGAGCTCCCCTTaGCACCTGGACCGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRWSSP*HLDRPS
Trigger: GCTAGGCCGGTCCAGGTGGCAAGGGGAGCTCCAGCG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTTGGGGCCTGGGCTTCTaGCCCATCTTCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPWGLGF*PIFSSG
Trigger: CCCGGAGCTGAAGATGGGGCAGAAGCCCAGGCCCCA...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVASASG*SRGTPG
Trigger: GCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGC...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGCTGCCGAATGGGCCTaGGGAGAAAGCGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRAAEWA*GESGSA
Trigger: CGCTGATCCGCTTTCTCCCCAGGCCCATTCGGCAGC...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTCTCCCCATTCTCACTaGCCCAGCTGGCGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRSPHSH*PSWRAS
Trigger: AGAGGCGCGCCAGCTGGGCCAGTGAGAATGGGGAGA...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGTGGCAGGCGGTGGCTaGGAGGGAGGGGACGCCCAC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEVAGGG*EGGDAH
Trigger: GTGGGCGTCCCCTCCCTCCCAGCCACCGCCTGCCAC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCAGGCAGGAGTGGTGTaGCAGGCGGTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGQAGVV*QAVAGR
Trigger: CCTCCCAGCCACCGCCTGCCACACCACTCCTGCCTG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTAGGCCCAGAAGAGCCTaGGGGATGGGCAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGRPRRA*GMGRSG
Trigger: CCCCGACCTGCCCATCCCCCAGGCTCTTCTGGGCCT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGTGCCCCGGGGGCTGTaGGAAGGAGGTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQVPRGL*EGGACP
Trigger: GGGGCAGGCACCTCCTTCTCACAGCCCCCGGGGCAC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGTGCCCCGGGGGCTGTaGGAAGGAGGTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLVPRGL*EGGACP
Trigger: GGGGCAGGCACCTCCTTCTCACAGCCCCCGGGGCAC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTGGGGCCTGCCAGGTaGCTCACAAGGCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLGPAR*LTRLKR
Trigger: CCTTTTCAGCCTTGTGAGTCACCTGGCAGGCCCCAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTGCCTCTCCGCTTGCTaGTGCTCCTCTCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRCLSAC*CSSPPH
Trigger: GTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAGGCA...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGCTCCTTCTGCAGGCTaGCCTCCTCGTCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLAPSAG*PPRRCP
Trigger: AGGGCAGCGACGAGGAGGGCAGCCTGCAGAAGGAGC...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTTGGCGCGCCTCTTGGTaGCCCGGGGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVWRASW*PGGCEK
Trigger: CTTCTCACAGCCCCCGGGGCACCAAGAGGCGCGCCA...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGCCTGGCCGCTCAGCTaGTCTTGGCCTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVAWPLS*SWPGEL
Trigger: CAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGC...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR GCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGGTTGGGATGTCCTaGCTGCGGAGGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVGVGMS*LRRGHS
Trigger: GCTGTGGCCCCTCCGCAGGCAGGACATCCCAACCCC...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGCTCCCCTTGCCACCTaGACCGGCCTAGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGAPLAT*TGLAVP
Trigger: TGGAACGGCTAGGCCGGTCCAGGTGGCAAGGGGAGC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCCACCCACCCTTGGTTaGGGTGGAGTGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRPPTLG*GGVMRL
Trigger: CAGCCTCATCACTCCACCCCAACCAAGGGTGGGTGG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGAAGCTGCTGCCGAATaGGCCTGGGGAGAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLREAAAE*AWGESG
Trigger: TCCGCTTTCTCCCCAGGCCCATTCGGCAGCAGCTTC...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGAGCTGGCGCGCCTCTTaGTGCCCCGGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQESWRAS*CPGGCE
Trigger: CTCACAGCCCCCGGGGCACCAAGAGGCGCGCCAGCT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCTCTCACTGGCCCAGCTaGCGCGCCTCTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPSHWPS*RASWCP
Trigger: GGGGCACCAAGAGGCGCGCCAGCTGGGCCAGTGAGA...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTTGGCAGGGGTCATCTaGGTGCCCTCGGCGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLLAGVI*VPSASV
Trigger: GACCGACGCCGAGGGCACCCAGATGACCCCTGCCAA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTTTCCCGTGCTGCCTaGGAGATGTTGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLSRAA*EMLAAP
Trigger: CGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGGCCCTTCCTCTTGGTaGCACCTGGGCACTCAAGGA +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLGPSSW*HLGTQG
Trigger: TCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACAGATCCAGTTGCGCTTaGGGTGTCCGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPVLLGAQRVVDPAPVDRSSCA*GVRRSW
Trigger: CCAGCTTCTACGGACACCTCAAGCGCAACTGGATCT...GTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVATAGR*SRHSHS
Trigger: ACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGC...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR TCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCTAGAGTCTGGAATGTaGGGTGTGCACAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPLESGM*GVHRRG
Trigger: GCCCCGCCTGTGCACACCTCACATTCCAGACTCTAG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTCCATGGCGCTCTCCTaGTCCTTCTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLSMALS*SFCRLP
Trigger: GGGCAGCCTGCAGAAGGAGCAGGAGAGCGCCATGGA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCCATGCTCCGGCGCTTaGCCCCTACACCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLPCSGA*PLHLRP
Trigger: TGGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCCAGGAGGGCCTGGATaGAATCTGCGAATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRPGGPG*NLRMSW
Trigger: CCAGGACATTCGCAGATTGCATCCAGGCCCTCCTGG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCTGTGCTGCTCCCGCTaGAGCGGTGTCTTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPLCCSR*SGVFKS
Trigger: GCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGAAGAGACACCACCTTaGCTAGCCCGGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLEETPP*LARRSA
Trigger: TGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGTGGTGTACTCCAGCATaGCGCACTTGCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAWCTPA*RTCAPG
Trigger: ACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCA...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQLGPSV*LTRRRL
Trigger: CAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAATCTGCGAATGTCCTaGTGCGCCCACCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPANLRMS*CAHHLP
Trigger: AGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTTGGCAGGGGTCATCTaGGTGCCCTCGGCGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALAGVI*VPSASV
Trigger: GACCGACGCCGAGGGCACCCAGATGACCCCTGCCAA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGTCTTCAGAGCCCTCTaGAGGCTGCGCCTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAVFRAL*RLRLAA
Trigger: AGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGAC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356183.9
CDS-3UTR CCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGGGACTCCAGGCCCTaGAGCAACTCCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRDSRP*SNSSTA
Trigger: CGCCGTGCTGGAGTTGCTCCAGGGCCTGGAGTCCCT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CAA 72 bp TTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FLGPSVWLTRRR*TKLLFWHSMKA
Trigger: GGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTTGAAAGCAGTGGTGTaGAGGTCTCGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRLKAVV*RSRWSS
Trigger: GGAGCTCCAGCGAGACCTTCACACCACTGCTTTCAA...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGCACTGTCTTGGAGATaGCCTCCTCGTCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLALSWR*PPRPRH
Trigger: ATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGTCGTAGGTCTGTGTaGGCATATCCCGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAGRRSV*AYPART
Trigger: TGTTCGAGCGGGATATGCTCACACAGACCTACGACC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCGCCTAGTGGGGTGTTaGGGCAGACGCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKARLVGC*GRRTAG
Trigger: ACCTGCAGTGCGTCTGCCTCAACACCCCACTAGGCG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTGCTGCTGTTCTTCCTaGCGCGCGGGCAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQCCCSS*RAGSAP
Trigger: TGGTGCGCTGCCCGCGCGTCAGGAAGAACAGCAGCA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCTGTTGCCTCTGGCACTaGGGGGCATTGGGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPCCLWH*GALGAW
Trigger: CCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAACA...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGGTGACTCACAAGGCTaGAAAGGGAGCCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGGDSQG*KGSRSA
Trigger: AGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGTGGTCAAGAGCTCGCTaGGGGCCTTCTCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAWSRAR*GPSLFG
Trigger: ACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGACCA...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGCTTCTCCACGGTGTTaGTGGCAGGGTGCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGASPRC*WQGARR
Trigger: TCTACGGGCACCCTGCCAGCAACACCGTGGAGAAGC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCCGCGTCATCCGCTaGAGGGCACTCTGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCSRVIR*RALWSA
Trigger: AGCCGACCAGAGTGCCCTGCAGCGGATGACGCGGCT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTAGCCGCGTCATCCGCTaGAGGGCACTCTGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEASRVIR*RALWSA
Trigger: AGCCGACCAGAGTGCCCTGCAGCGGATGACGCGGCT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLRGPA*SGSGSE
Trigger: TTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGCGGGCACAGGGGTaGAGCGGAGCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLGRAQG*SGAGTS
Trigger: TGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGCCC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGTGCGCCCACCACCTaGCTTCTCCAAGGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVGAPTT*LLQGRE
Trigger: TTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACC...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGCCAGGCGCGCAGTGTTaGCACCGACCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQPGAQC*HRPPAP
Trigger: AGGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGG...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTTCAGCCGCACGGAGTaGAGGAGCCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAFSRTE*RSQGQA
Trigger: TGCCTGGCCTTGGCTCCTGCACTCCGTGCGGCTGAA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGTCCCTTTCCCGTGCTaGCTGGGAGATGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGVPFPC*LGDVGS
Trigger: GCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGAC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTTGGGATGTCCTGCCTaGGGAGGGGCCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLGCPA*GGATAP
Trigger: GGGGGCTGTGGCCCCTCCGCAGGCAGGACATCCCAA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGATGAGGCTGGGTCTTaGGCCGGAGGTTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLDEAGS*AGGLQR
Trigger: CCTCTGCAAACCTCCGGCCCAAGACCCAGCCTCATC...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCTTTCCACCCACCCTTaGTTGGGGTGGAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRLSTHP*LGWSDE
Trigger: CTCATCACTCCACCCCAACCAAGGGTGGGTGGAAAG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCAGAGGCTGTCCCTGCTaGCAAGGCTCTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKARGCPC*QGSGRL
Trigger: GAGCCTGCCAGAGCCTTGCCAGCAGGGACAGCCTCT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTCTTCTGCCTCCCCTTaGGGCACTGGAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVSSASP*GTGGWE
Trigger: TTCCCAGCCTCCAGTGCCCCAAGGGGAGGCAGAAGA...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCCTGTGGACTGGGATTaGGGGGATGTAGCGCATCCA +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPPVDWD*GDVAHP
Trigger: TGGATGCGCTACATCCCCCCAATCCCAGTCCACAGG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGTTGTGCTTGTCCATaGCGCTCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAGCACP*RSPAPS
Trigger: AGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLGPSV*LTRRRL
Trigger: CAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGTGGGGGTCTTCTCTCTaGATGTCGGCGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLWGSSL*MSASSL
Trigger: CAGAGAAGACGCCGACATCCAGAGAGAAGACCCCCA...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGGAGCGCTGGCCTCTTaGCAGGGGTCATCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCGALAS*QGSSGC
Trigger: GCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGCCAAATTTGAGTCCTaGAGCGCTGGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRAKFES*SAGLLA
Trigger: TGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGC...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGTCTTCAGAGCCCTCTaGAGGCTGCGCCTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEVFRAL*RLRLAA
Trigger: AGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGAC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGGACTCCAGGCCCTaGAGCAACTCCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCRDSRP*SNSSTA
Trigger: CGCCGTGCTGGAGTTGCTCCAGGGCCTGGAGTCCCT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCTCATAGAAAGCCATaGGGCTCTCGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPAHRKP*GSRPGW
Trigger: CCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGC...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGTGGCAGGCGGTGGCTaGGAGGGAGGGGACGCCCAC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVVAGGG*EGGDAH
Trigger: GTGGGCGTCCCCTCCCTCCCAGCCACCGCCTGCCAC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCAGGCCCAGAAGAGCCTaGGGGATGGGCAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLRPRRA*GMGRSG
Trigger: CCCCGACCTGCCCATCCCCCAGGCTCTTCTGGGCCT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCAGGCCCAGAAGAGCCTaGGGGATGGGCAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCRPRRA*GMGRSG
Trigger: CCCCGACCTGCCCATCCCCCAGGCTCTTCTGGGCCT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCAAGGCCCTTCCTCTTaGTGGCACCTGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPQGPSS*WHLGTQ
Trigger: TTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGGGAGCCGCTCCGCTCTaGGTGGTTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQGAAPL*VVQSQP
Trigger: TGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCC...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTAACCCGACACCCTCTTaGTCTTCCTGTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPNPTPS*SSCAAP
Trigger: GGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTT...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGCTCCTCATAGAAGCTaGTGCCCGGGTGCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQAPHRS*CPGAWR
Trigger: TCGCCACGCACCCGGGCATCAGCTTCTATGAGGAGC...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGACGCCTGCCCTGCCTaGCTCCTGCTTTATCGTTCT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGDACPA*LLLYRS
Trigger: AGAACGATAAAGCAGGAGTCAGGCAGGGCAGGCGTC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGAGGAGGATGTCGCTaGCGAGAGCCCAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRGGCR*REPSQS
Trigger: GCTTTGGCTGGGCTCTCGTCAGCGACATCCTCCTCT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTGCTGCTGTTCTTCCTaGCGCGCGGGCAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLCCCSS*RAGSAP
Trigger: TGGTGCGCTGCCCGCGCGTCAGGAAGAACAGCAGCA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTCTGGAGCCTCACTGTaGGTCCATTCTCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVSGASL*VHSLRQ
Trigger: CTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGA...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGTCATCTGGCAGGAGTTaGCCACAATGCTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLSSGRS*PQCCRW
Trigger: CCAACGACAGCATTGTGGTCAACTCCTGCCAGATGA...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCCGACCTCCAGCACCTaGTGCTGCTCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDPTSST*CCSRRA
Trigger: GGCCCTCCTGGAGCAGCATCAGGTGCTGGAGGTCGG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCATAGR*SRHSHS
Trigger: ACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR TCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTGCCAGGCCTGGTCATaGTGTGGTACAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLCQAWS*CGTAWP
Trigger: AGGCCATGCTGTACCACATCATGACCAGGCCTGGCA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTTCCACTTGTTCCAGTTaGCCTCGTGGGGGAACACAC +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPSTCSS*PRGGTH
Trigger: GTGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGA...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTAATCACCAGCCAGGCTaGGGGACACGGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESNHQPG*GTRTAS
Trigger: GCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATT...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCTTTCTGGGACCCTCTaGCTCTCCGCTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVLSGTL*LSACCC
Trigger: GCAGCAGCAAGCGGAGAGGCAGAGGGTCCCAGAAAG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTATGTCACCACTGTTaGTGTCCGCACAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLCHHC*CPHSGR
Trigger: TCTCCCACTGTGCGGACAGCAACAGTGGTGACATAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTGGTCCATGGACGGGTaGACCACCAGATCCACCTTC +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVWSMDG*TTRSTF
Trigger: GAAGGTGGATCTGGTGGTGCACCCGTCCATGGACCA...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGCCGGACGCCTGCCCTaGCTGACTCCTGCTTTATCG +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESAGRLP*LTPALS
Trigger: CGATAAAGCAGGAGTCAGGCAGGGCAGGCGTCCGGC...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTAAGCGGATCAGCGTGTaGTTCTTCAGCGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPKRISV*FFSGSF
Trigger: GAACGACCCGCTGAAGAAGCACACGCTGATCCGCTT...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGTCTCGAAGGGCCGGCTaGTGCGGGCCAGGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWSRRAG*CGPGCN
Trigger: ATTACAACCTGGCCCGCAGCAGCCGGCCCTTCGAGA...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTGCCCTCCTCGTCGCTaGCCTGGTCTGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESCPPRR*PGLCCC
Trigger: ACAGCAGCACAGACCAGGGCAGCGACGAGGAGGGCA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGCTGGAATCGAGCCCTaGGGCACCCAGCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCAGIEP*GTQPIS
Trigger: GGAGATGGGCTGGGTGCCGCAGGGCTCGATTCCAGC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGCTGGAATCGAGCCCTaGGGCACCCAGCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQAGIEP*GTQPIS
Trigger: GGAGATGGGCTGGGTGCCGCAGGGCTCGATTCCAGC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGTCTACCACGATGATCTaGTCCGGGATCCTGACATCC +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLSTTMI*SGILTS
Trigger: GGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGA...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGGTGCGCCCACCACCTaGCTTCTCCAAGGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCGAPTT*LLQGRE
Trigger: TTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTGCGAATGTCCTGGTaGGCCCACCACCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALRMSW*AHHLPS
Trigger: AGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTTCAGCCGCACGGAGTaGAGGAGCCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLFSRTE*RSQGQA
Trigger: TGCCTGGCCTTGGCTCCTGCACTCCGTGCGGCTGAA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGASASG*SRGTPG
Trigger: GCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCACGCCAGGCTCACGGTaGTCAAGAGCTCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLTPGSR*SRARCG
Trigger: CCCGCAGCGAGCTCTTGACCACCGTGAGCCTGGCGT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGAGAGGCTGTCCCTGCTaGCAAGGCTCTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQERGCPC*QGSGRL
Trigger: GAGCCTGCCAGAGCCTTGCCAGCAGGGACAGCCTCT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGTCGTTCTGGTCCATaGACGGGTGCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLGRSGP*TGAPPD
Trigger: ATCTGGTGGTGCACCCGTCCATGGACCAGAACGACC...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTACTAGAGGGTCGTTCTaGTCCATGGACGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGTRGSF*SMDGCT
Trigger: GGTGCACCCGTCCATGGACCAGAACGACCCTCTAGT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGTCTTCTGCCTCCCCTTaGGGCACTGGAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWSSASP*GTGGWE
Trigger: TTCCCAGCCTCCAGTGCCCCAAGGGGAGGCAGAAGA...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTACCACAGAAACATGTaGACCACCCGCAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLYHRNM*TTRRRG
Trigger: GCCTCGCCTGCGGGTGGTCCACATGTTTCTGTGGTA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCAGGTGACACCATCTTaGCTGCCTTTAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRQVTPS*LPLDGA
Trigger: AGCCCCATCTAAAGGCAGCCAAGATGGTGTCACCTG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGACAAGTGCTTTATCCTaGTACACCTCGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRTSALS*YTSARH
Trigger: GTGCCTGGCCGAGGTGTACCAGGATAAAGCACTTGT...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ARFFLGPSVWLTRRRLTKTKLLF*HSMKAF
Trigger: GAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT...CTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGAGAAACGATCAGGCTaGTCCAACTTGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGEKRSG*SNLPAA
Trigger: GGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGCCAGGCAGAGCCCATaGCTACCAGGCGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLARQSP*LPGAQC
Trigger: ACACTGCGCGCCTGGTAGCCATGGGCTCTGCCTGGC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCTGCCTGGGAGATGTTaGCAGCTCCGAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPLPGRC*QLRNSL
Trigger: CAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGACAGGAAGGTTCAGGTaGCCATCCACGACACGCCAC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLTGRFR*PSTTRH
Trigger: GTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTGT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTGCTCATAGAAAGCCATaGGGCTCTCGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGAHRKP*GSRPGW
Trigger: CCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGC...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGGGGTACAGTCCAAGGTaGGCTCATAGAAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLGYSPR*AHRKPW
Trigger: CCATGGCTTTCTATGAGCCCACCTTGGACTGTACCC...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCAAGGCCAGGGCACAGTaGGGTCTGCCGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCKARAQ*GLPSTR
Trigger: CCTGGTGCTCGGCAGACCCCACTGTGCCCTGGCCTT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCCTCTTGGTGGCACCTaGGCACTCAAGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPPLGGT*ALKEPG
Trigger: TCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCTCCTCCTGTCCACATaGAACCGGTTCAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLLLLST*NRFSRR
Trigger: CCTCCTACTGAACCGGTTTCATGTGGACAGGAGGAG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCAGCTGAGAGTCCCCTaGTCCACTTGGGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAQLRVP*STWALF
Trigger: AAAGAGGGCCCAAGTGGATCAGGGGACTCTCAGCTG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTAGATCCAGTTGCGCTTaGGGTGTCCGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGRSSCA*GVRRSW
Trigger: CCAGCTTCTACGGACACCTCAAGCGCAACTGGATCT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCATCTGACTGTCTaGGAGGGCCAGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALHLTV*EGQRAL
Trigger: CAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGTCTTCTGGCACTCCATaGAGGCCTTCACAAGAACGT +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLSSGTP*RPSQER
Trigger: ACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGA...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCGACCTCCAGCACCTaGTGCTGCTCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVPTSST*CCSRRA
Trigger: GGCCCTCCTGGAGCAGCATCAGGTGCTGGAGGTCGG...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQATAGR*SRHSHS
Trigger: ACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTCCACTTGTTCCAGTTaGCCTCGTGGGGGAACACAC +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVSTCSS*PRGGTH
Trigger: GTGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGA...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCCTCCAGCGCGTCCATTaGTACTTCAGTCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLLQRVH*YFSRRR
Trigger: GCGCCGCCGACTGAAGTAGCAATGGACGCGCTGGAG...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAGAGAAACTCCTGCGTaGAGGGTTCCAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRETPA*RVPKAA
Trigger: CGCTGCCTTTGGAACCCTGCACGCAGGAGTTTCTCT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTGCCTCTCCGCTTGCTaGTGCTCCTCTCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESCLSAC*CSSPPH
Trigger: GTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAGGCA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCTCTTGTACAGAAGCTaGTGCCGAATGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWLLYRS*CRMGLG
Trigger: CCCCAGGCCCATTCGGCAGCAGCTTCTGTACAAGAG...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCTCTTGTACAGAAGCTaGTGCCGAATGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPLLYRS*CRMGLG
Trigger: CCCCAGGCCCATTCGGCAGCAGCTTCTGTACAAGAG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCGAAGGGCCGGCTGCTaGGGGCCAGGTTGTAATGTG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCRRAGC*GPGCNV
Trigger: CACATTACAACCTGGCCCGCAGCAGCCGGCCCTTCG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCCTCCTCGTCGCTaGCCTGGTCTGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCCPPRR*PGLCCC
Trigger: ACAGCAGCACAGACCAGGGCAGCGACGAGGAGGGCA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGTCCATGGCGCTCTCCTaGTCCTTCTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQSMALS*SFCRLP
Trigger: GGGCAGCCTGCAGAAGGAGCAGGAGAGCGCCATGGA...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGTTGCGCTCCAGGTTGTaGTTGTCCATGGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWLRSRL*LSMALS
Trigger: GGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAA...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCCAGCATGGCGCACTTaGGCTCCAGGTTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPPAWRT*APGCAC
Trigger: ACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCGGTCCACCTCAAACTaGTCTTCCCAGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRSTSN*SSQPAQ
Trigger: CTGTGCTGGCTGGGAAGAGCAGTTTGAGGTGGACCG...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGATGTCCCGTACCACCTaGCAGGTGACAAATGGGCCC +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWMSRTT*QVTNGP
Trigger: GGGCCCATTTGTCACCTGGCAGGTGGTACGGGACAT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGLRGPA*SGSGSE
Trigger: TTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCAGGCTGGTCCAACTTaGCGGCAGCCCGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEQAGPT*RQPAFC
Trigger: ACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCAGGCTGGTCCAACTTaGCGGCAGCCCGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLQAGPT*RQPAFC
Trigger: ACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCAGGTTTCACCTCCATaGTCCGGCGCTTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEQVSPP*SGACPL
Trigger: TAGGGGGCAAGCGCCGGAGCATGGAGGTGAAACCTG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTGGCCTGGATGCAATCTaGGAATGTCCTGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAGLDAI*ECPGAP
Trigger: GGGCGCACCAGGACATTCGCAGATTGCATCCAGGCC...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCAGGCGCGCAGTGTTaGCACCGACCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGPGAQC*HRPPAP
Trigger: AGGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGG...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTGAGCCCTCTGGAGGCTaGGCCTGGCCGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTEPSGG*AWPLSC
Trigger: GCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTC...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAGCCCAGCTGGGGCCTaGCAGGTGACTCACAAGGCT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQSPAGA*QVTHKA
Trigger: AGCCTTGTGAGTCACCTGGCAGGCCCCAGCTGGGCT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCTGTACCGCATGGCCTaGGAGGCAACGATGATCAGT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLLYRMA*EATMIS
Trigger: ACTGATCATCGTTGCCTCCCAGGCCATGCGGTACAG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCCCCAGCGTCTCTATGTaGTTAGTCCGTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVPSVSM*LVRVLS
Trigger: GCTGAGCACACGGACTAACCACATAGAGACGCTGGG...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAACGCCAGGCTCACGGTaGTCAAGAGCTCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGTPGSR*SRARCG
Trigger: CCCGCAGCGAGCTCTTGACCACCGTGAGCCTGGCGT...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCCTTTCCACCCACCCTTaGTTGGGGTGGAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVLSTHP*LGWSDE
Trigger: CTCATCACTCCACCCCAACCAAGGGTGGGTGGAAAG...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTTGGCTGCCTTTAGATaGGGCTTCAGAGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLLAAFR*GFRAGL
Trigger: GAGGCCTGCTCTGAAGCCCCATCTAAAGGCAGCCAA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGCTGCCGAATGGGCCTaGGGAGAAAGCGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLAAEWA*GESGSA
Trigger: CGCTGATCCGCTTTCTCCCCAGGCCCATTCGGCAGC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCCTCACGGCTTCCAGTaGTGTACTCCAGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCPHGFQ*CTPAWR
Trigger: GCGCCATGCTGGAGTACACCACTGGAAGCCGTGAGG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCCTCACGGCTTCCAGTaGTGTACTCCAGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQPHGFQ*CTPAWR
Trigger: GCGCCATGCTGGAGTACACCACTGGAAGCCGTGAGG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCGGGGCATTGGGCGCTTaGACAGAAATGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPGALGA*TEMSGA
Trigger: GGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCC...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAACGTGTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: PVDQAPLLALHEGLHKNVLGPSV*LTRRRL
Trigger: CAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAA...CACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGGGGTGCAGCGGAGCTaGAACTTCATCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCGVQRS*NFIWQE
Trigger: CTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCTCCGGGCCCAAGGCTaGGGGCCAAATTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLLRAQG*GPNLSP
Trigger: AGGACTCAAATTTGGCCCCCAGCCTTGGGCCCGGAG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCTTTCCCGTGCTGCCTaGGAGATGTTGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEALSRAA*EMLAAP
Trigger: CGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCGAGCGAGACAGGCCTTaGCTTTCTCAGCCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPERDRP*LSQPAL
Trigger: AAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTC...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTTCCAGTTGACCTCGTaGGGGAACACACGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCFQLTS*GNTRPS
Trigger: GCTGGGCCGTGTGTTCCCCCACGAGGTCAACTGGAA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCAGGCAGGAGTGGTGTaGCAGGCGGTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVQAGVV*QAVAGR
Trigger: CCTCCCAGCCACCGCCTGCCACACCACTCCTGCCTG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCAAGGCCCTTCCTCTTaGTGGCACCTGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVQGPSS*WHLGTQ
Trigger: TTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCCTTG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGCTCCTCATAGAAGCTaGTGCCCGGGTGCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQAPHRS*CPGAWR
Trigger: TCGCCACGCACCCGGGCATCAGCTTCTATGAGGAGC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCTTAAAGTAGCGGCATaGGCCCTGGATGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLLKVAA*ALDAIL
Trigger: AAGGATGGCATCCAGGGCTCATGCCGCTACTTTAAG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTGGTTTGTCTTGGCCTaGGCTGTGCCTCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAWFVLA*AVPPSL
Trigger: AAGACTGGGAGGCACAGCTCAGGCCAAGACAAACCA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCCTGTTGGCTGTGCTTaGATTGGAGATCCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVPVGCA*IGDPEA
Trigger: CGCTTCCGGATCTCCAATTCAAGCACAGCCAACAGG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCCTGTTGGCTGTGCTTaGATTGGAGATCCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWPVGCA*IGDPEA
Trigger: CGCTTCCGGATCTCCAATTCAAGCACAGCCAACAGG...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCAGCTGAGAGTCCCCTaGTCCACTTGGGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEQLRVP*STWALF
Trigger: AAAGAGGGCCCAAGTGGATCAGGGGACTCTCAGCTG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGACGCCTGCCCTGCCTaGCTCCTGCTTTATCGTTCT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEDACPA*LLLYRS
Trigger: AGAACGATAAAGCAGGAGTCAGGCAGGGCAGGCGTC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCAGATCCAGTTGCGCTTaGGGTGTCCGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKARSSCA*GVRRSW
Trigger: CCAGCTTCTACGGACACCTCAAGCGCAACTGGATCT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTCTGGAGCCTCACTGTaGGTCCATTCTCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESSGASL*VHSLRQ
Trigger: CTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCTTGGCCTGGGGAACTaGACTCACCGACACCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQELGLGN*THRHPL
Trigger: AAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTGCCAGGCCTGGTCATaGTGTGGTACAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLCQAWS*CGTAWP
Trigger: AGGCCATGCTGTACCACATCATGACCAGGCCTGGCA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCCTAGAGTCTGGAATGTaGGGTGTGCACAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLLESGM*GVHRRG
Trigger: GCCCCGCCTGTGCACACCTCACATTCCAGACTCTAG...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGGTGACTCACAAGGCTaGAAAGGGAGCCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLGDSQG*KGSRSA
Trigger: AGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGCTGGGGCCTGCCAGGTaGCTCACAAGGCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQLGPAR*LTRLKR
Trigger: CCTTTTCAGCCTTGTGAGTCACCTGGCAGGCCCCAG...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGCATGAGCCCTGGATaGCATCCTTATTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAGMSPG*HPYSLR
Trigger: TCTTAGAGAATAAGGATGGCATCCAGGGCTCATGCC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTAGCCGTTCCAGGATaGAGTAGGAGAAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALAVPG*SRRSRA
Trigger: TGCCCGACTTCTCCTACTGCATCCTGGAACGGCTAG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGATCACATGGGACTaGATTGTAATCAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLRITWD*IVISPF
Trigger: AAACGGGCTGATTACAATGCAGTCCCATGTGATCCG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTGGTCAAGAGCTCGCTaGGGGCCTTCTCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAWSRAR*GPSLFG
Trigger: ACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGACCA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTAGAAGCGACTCCTCCTaGATAGACGCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEARSDSS*IDARLT
Trigger: CGTGAGCCTGGCGTCTATGCAGGAGGAGTCGCTTCT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGCTTTCTGGGACCCTCTaGCTCTCCGCTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQLSGTL*LSACCC
Trigger: GCAGCAGCAAGCGGAGAGGCAGAGGGTCCCAGAAAG...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTGGTCCATGGACGGGTaGACCACCAGATCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCWSMDG*TTRSTF
Trigger: GAAGGTGGATCTGGTGGTGCACCCGTCCATGGACCA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTAAGCGGATCAGCGTGTaGTTCTTCAGCGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVKRISV*FFSGSF
Trigger: GAACGACCCGCTGAAGAAGCACACGCTGATCCGCTT...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCCAGCATGGCGCACTTaGGCTCCAGGTTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAPAWRT*APGCAC
Trigger: ACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCGGTCCACCTCAAACTaGTCTTCCCAGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQRSTSN*SSQPAQ
Trigger: CTGTGCTGGCTGGGAAGAGCAGTTTGAGGTGGACCG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTATGTCCCGTACCACCTaGCAGGTGACAAATGGGCCC +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAMSRTT*QVTNGP
Trigger: GGGCCCATTTGTCACCTGGCAGGTGGTACGGGACAT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAATCTTCAAACGTGGCATaGAAAATGTCCCGTACCACC +
Preference number: 4 (lower is better)
Translates to: GPVLLGAQRVVDPAPVDQSSNVA*KMSRTT
Trigger: GGTGGTACGGGACATTTTGCATGCCACGTTTGAAGA...TTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCCATGCTCCGGCGCTTaGCCCCTACACCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSPCSGA*PLHLRP
Trigger: TGGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGGCCTGGATGCAATCTaGGAATGTCCTGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLGLDAI*ECPGAP
Trigger: GGGCGCACCAGGACATTCGCAGATTGCATCCAGGCC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTGGCGCGCCTCTTGGTaGCCCGGGGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGWRASW*PGGCEK
Trigger: CTTCTCACAGCCCCCGGGGCACCAAGAGGCGCGCCA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCAGGGGTCATCTGGGTaGCCTCGGCGTCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLQGSSG*PRRRSP
Trigger: GGGAGACCGACGCCGAGGGCACCCAGATGACCCCTG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTGGGGCCTGGGCTTCTaGCCCATCTTCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVWGLGF*PIFSSG
Trigger: CCCGGAGCTGAAGATGGGGCAGAAGCCCAGGCCCCA...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCTGTGCTGCTCCCGCTaGAGCGGTGTCTTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLCCSR*SGVFKS
Trigger: GCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLVFLC*SRCSGV
Trigger: GACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLLVFL*CSRCSG
Trigger: ACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGCCTGGCCGCTCAGCTaGTCTTGGCCTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVAWPLS*SWPGEL
Trigger: CAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCACAGTCCCTTTCCCGTaGTGCCTGGGAGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCTVPFP*CLGDVG
Trigger: GCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTASASG*SRGTPG
Trigger: GCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGC...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGTTGGGATGTCCTGCCTaGGGAGGGGCCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLLGCPA*GGATAP
Trigger: GGGGGCTGTGGCCCCTCCGCAGGCAGGACATCCCAA...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGAGCCCAGCTGGGGCCTaGCAGGTGACTCACAAGGCT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQSPAGA*QVTHKA
Trigger: AGCCTTGTGAGTCACCTGGCAGGCCCCAGCTGGGCT...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAAGAGACACCACCTTaGCTAGCCCGGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQEETPP*LARRSA
Trigger: TGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTC...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGCTCTTGTGTCTTTCTaGGACCCTCTGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESALVSF*DPLPLR
Trigger: GCGGAGAGGCAGAGGGTCCCAGAAAGACACAAGAGC...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGATGAGGCTGGGTCTTaGGCCGGAGGTTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQDEAGS*AGGLQR
Trigger: CCTCTGCAAACCTCCGGCCCAAGACCCAGCCTCATC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCACCCTTGGTTGGGGTaGAGTGATGAGGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQHPWLG*SDEAGS
Trigger: AGACCCAGCCTCATCACTCCACCCCAACCAAGGGTG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTACCACAGAAACATGTaGACCACCCGCAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEYHRNM*TTRRRG
Trigger: GCCTCGCCTGCGGGTGGTCCACATGTTTCTGTGGTA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTGGTGTACTCCAGCATaGCGCACTTGCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEWCTPA*RTCAPG
Trigger: ACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGGTGTCCGTAGAAGCTaGAATCGAGCCCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQGVRRS*NRALRH
Trigger: GTGCCGCAGGGCTCGATTCCAGCTTCTACGGACACC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGACAAGTGCTTTATCCTaGTACACCTCGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLTSALS*YTSARH
Trigger: GTGCCTGGCCGAGGTGTACCAGGATAAAGCACTTGT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTGGCGAACAGCTCCTaGAGTGTGTCTGGGATTTCA +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGLANSS*SVSGIS
Trigger: TGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTATGACTCCGTGCAGATaGTGCTTGGAAATCGCCACG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGMTPCR*CLEIAT
Trigger: CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCAT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCCACCATGTCGTTTGTaGGCTCGTTATTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAPPCRL*ARYYPG
Trigger: ACCAGGATAATAACGAGCCCACAAACGACATGGTGG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGAGCTGGAACTTCATCTaGCAGGAGTTGACCACAATG +
Preference number: 4 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLSWNFI*QELTTM
Trigger: CATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCT...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGGGGTGCAGCGGAGCTaGAACTTCATCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLGVQRS*NFIWQE
Trigger: CTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCTGCAGGTGTTTTCCTaGGGGTTTATCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPLQVFS*GFISLV
Trigger: CACCAAGCTGATAAACCCCCAGGAAAACACCTGCAG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGAATCTGCGAATGTCCTaGTGCGCCCACCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLNLRMS*CAHHLP
Trigger: AGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGGTGGAGATGGGGCCTaGGCTTCTGCCCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLGGDGA*ASAPSS
Trigger: TGAAGATGGGGCAGAAGCCCAGGCCCCATCTCCACC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGGTGGAGATGGGGCCTaGGCTTCTGCCCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCGGDGA*ASAPSS
Trigger: TGAAGATGGGGCAGAAGCCCAGGCCCCATCTCCACC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTCACCGACACCCTCTTaGTCTTCCTGTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLSPTPS*SSCAAP
Trigger: GGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356183.9
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTCTGGAGGCTGCGCCTaGCCGCTCAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVSGGCA*PLSCSW
Trigger: CCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCACAGGAAGGTTCAGGTaGCCATCCACGACACGCCAC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCTGRFR*PSTTRH
Trigger: GTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTGT...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTGAGCGAGACAGGCCTTaGCTTTCTCAGCCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAERDRP*LSQPAL
Trigger: AAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTC...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCATAGAAAGCCATaGGGCTCTCGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEAHRKP*GSRPGW
Trigger: CCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGGGTACAGTCCAAGGTaGGCTCATAGAAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVGYSPR*AHRKPW
Trigger: CCATGGCTTTCTATGAGCCCACCTTGGACTGTACCC...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGTTCCAGTTGACCTCGTaGGGGAACACACGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQFQLTS*GNTRPS
Trigger: GCTGGGCCGTGTGTTCCCCCACGAGGTCAACTGGAA...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGGCGGGGCAAACTCTaGAGACCCAGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRRGKL*RPRDKK
Trigger: CTTCTTGTCTCTGGGTCTCCAGAGTTTGCCCCGCCT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPEMARV*NVRCAQ
Trigger: CTGTGCACACCTCACATTCCAGACTCTAGCCATCTC...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGGAGCCGCTCCGCTCTaGGTGGTTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVGAAPL*VVQSQP
Trigger: TGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCTTAAAGTAGCGGCATaGGCCCTGGATGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPLKVAA*ALDAIL
Trigger: AAGGATGGCATCCAGGGCTCATGCCGCTACTTTAAG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTTGAAAGCAGTGGTGTaGAGGTCTCGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESLKAVV*RSRWSS
Trigger: GGAGCTCCAGCGAGACCTTCACACCACTGCTTTCAA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCTCCTCCTGTCCACATaGAACCGGTTCAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCLLLST*NRFSRR
Trigger: CCTCCTACTGAACCGGTTTCATGTGGACAGGAGGAG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGAAGCACTCAGCTaGGAGTCCCCTGATCCACTT +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQEEALS*ESPDPL
Trigger: AAGTGGATCAGGGGACTCTCAGCTGAGTGCTTCCTC...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTGTTGCCTCTGGCACTaGGGGGCATTGGGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVCCLWH*GALGAW
Trigger: CCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAACA...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGTGTTGCCTCTGGCACTaGGGGGCATTGGGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALHEGLHKNVVLVLPIEACCLWH*GALGAW
Trigger: CCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAACA...CGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAGGCCTGTGGGTTTTTaGCTATGTAGCGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRPVGF*LCSELF
Trigger: GAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTCTGGATCAGGTTCTaGAGCACCAGAAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGLWIRF*STRKWM
Trigger: CATCCACTTTCTGGTGCTTCAGAACCTGATCCAGAG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCGCGGAAAGTCTGGAATaGCTGGTAGGACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVAESLE*LVGLHL
Trigger: CAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGC...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTCTCATTCTCCACCATTaGGCTGTCTACCACGATGAT +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPLILHH*AVYHDD
Trigger: ATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAG...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCGGTTTATCAGCTTGGTaGACGTATCAGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPGLSAW*TYQGGR
Trigger: CCTGCCTCCCTGATACGTTCACCAAGCTGATAAACC...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCTTGGCCTGGGGAACTaGACTCACCGACACCCTCTT +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLGLGN*THRHPL
Trigger: AAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR TCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCTCCGAAACTCTCTGTaGACCCTCTGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEALRNSL*TLWGLQ
Trigger: CTGAAGACCCCAGAGGGTTCACAGAGAGTTTCGGAG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCTCCGAAACTCTCTGTaGACCCGACACCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLLRNSL*TRHPLG
Trigger: ACCAAGAGGGTGTCGGGTTCACAGAGAGTTTCGGAG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTATTGTACAGCGAGGCTaGAAGGACTTGGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPIVQRG*KDLVLM
Trigger: CATCAGAACCAAGTCCTTGCAGCCTCGCTGTACAAT...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTAGGAGGATTGAGTGTTaGTGGGCTCCAGTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGRRIEC*WAPVGN
Trigger: ATTACCCACTGGAGCCCAGCAACACTCAATCCTCCT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTACTTGGTGGTTCGCTaGCGACCTTCGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAYLVVR*RPSSSM
Trigger: CATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGTTCTCTCTTTGGTACTaGCGGCTTAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWFSLWY*RLRSLS
Trigger: GGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAA...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCTATGTCACCACTGTTaGTGTCCGCACAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPLCHHC*CPHSGR
Trigger: TCTCCCACTGTGCGGACAGCAACAGTGGTGACATAG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTATCCGGAAGCGGACCTaGTCGATGGCACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAIRKRT*SMALLT
Trigger: AGTGAGAAGTGCCATCGAGCAGGTCCGCTTCCGGAT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTTGACTGTCTTCTTCTaGCTCCCCTTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLLTVFF*LPLGHW
Trigger: CCAGTGCCCCAAGGGGAGGCAGAAGAAGACAGTCAA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGCCGGACGCCTGCCCTaGCTGACTCCTGCTTTATCG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVAGRLP*LTPALS
Trigger: CGATAAAGCAGGAGTCAGGCAGGGCAGGCGTCCGGC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTTGTACAGAAGCTGCTaGCGAATGGGCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQLYRSC*RMGLGR
Trigger: TCTCCCCAGGCCCATTCGGCAGCAGCTTCTGTACAA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGATCTCGAAGGGCCGGCTaGTGCGGGCCAGGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGSRRAG*CGPGCN
Trigger: ATTACAACCTGGCCCGCAGCAGCCGGCCCTTCGAGA...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp ACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGAGCCGCGTCATCCGCTaGAGGGCACTCTGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: TKLLFWHSMKAFTRTWSLSRVIR*RALWSA
Trigger: AGCCGACCAGAGTGCCCTGCAGCGGATGACGCGGCT...CAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCAGGCCGAGAACCGTCTaGGCAGCTCCTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCRPRTV*AAPPCQ
Trigger: TTGACAAGGAGGAGCTGCGCAGACGGTTCTCGGCCT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTGCGAATGTCCTGGTaGGCCCACCACCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQLRMSW*AHHLPS
Trigger: AGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGGTCCCTTTCCCGTGCTaGCTGGGAGATGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQVPFPC*LGDVGS
Trigger: GCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGAC...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACGTCCCTTTCCCGTGCTaGCTGGGAGATGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDVPFPC*LGDVGS
Trigger: GCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGAC...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCTGGAATGTGAGGTGTaGACAGGCGGGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQLECEV*TGGANS
Trigger: AGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGTCTTCATTTCTGGCCTaGAAGGAATCACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLSSFLA*KESPAR
Trigger: CCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCTGTACCGCATGGCCTaGGAGGCAACGATGATCAGT +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQLYRMA*EATMIS
Trigger: ACTGATCATCGTTGCCTCCCAGGCCATGCGGTACAG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTCGGGATCCCCCTCCTaGCCTATCAAGGCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSSGSPS*PIKALY
Trigger: GTACAGGGCCTTGATAGGCCAGGAGGGGGATCCCGA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTGCTCCCCTTGCCACCTaGACCGGCCTAGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTAPLAT*TGLAVP
Trigger: TGGAACGGCTAGGCCGGTCCAGGTGGCAAGGGGAGC...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGTTGCTGGGCTCCAGTaGGTAATCGGATCACATGGG +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLVAGLQ*VIGSHG
Trigger: CCCATGTGATCCGATTACCCACTGGAGCCCAGCAAC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCGTTCAGCATATACTaGTACAGACGCTTAAACGTC +
Preference number: 4 (lower is better)
Translates to: RSALGGSVPARGWDVLPAAFSIY*YRRLNV
Trigger: GACGTTTAAGCGTCTGTACCAGTATATGCTGAACGC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCGGGCCTTCTCTCTTTaGTACTGCCGGCTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCRAFSL*YCRLRS
Trigger: CGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGCTCTTGTGTCTTTCTaGGACCCTCTGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCALVSF*DPLPLR
Trigger: GCGGAGAGGCAGAGGGTCCCAGAAAGACACAAGAGC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGCACCCTTGGTTGGGGTaGAGTGATGAGGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQHPWLG*SDEAGS
Trigger: AGACCCAGCCTCATCACTCCACCCCAACCAAGGGTG...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCACTGCTACTCTCCTTTaGGTTTTCCATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVTATLL*VFHPDL
Trigger: GAGGTCCGGATGGAAAACCCAAAGGAGAGTAGCAGT...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTCGTGTGGTTTGTCTTaGCCTGAGCTGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLSCGLS*PELCLP
Trigger: TGGGAGGCACAGCTCAGGCCAAGACAAACCACACGA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTACTTCTTGCAGCACTTaGTGGACACGCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVTSCST*WTRLPA
Trigger: AGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGT...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTGGCTGTGCTTGAATTaGAGATCCGGAAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAWLCLN*RSGSGP
Trigger: AGGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGCAGGCGAGGCATTTTaGGCAGAAATCCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLAGEAF*AEILEN
Trigger: GTTCTCTAGGATTTCTGCCCAAAATGCCTCGCCTGC...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCATACACTGTCTCCGTaGCAAGCTCCACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAHTLSP*QAPLQP
Trigger: AGGCTGAAGTGGAGCTTGCCACGGAGACAGTGTATG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGAAGCTGCTGCCGAATaGGCCTGGGGAGAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQEAAAE*AWGESG
Trigger: TCCGCTTTCTCCCCAGGCCCATTCGGCAGCAGCTTC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGTCCTCGTCGCTGCCCTaGTCTGTGCTGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQSSSLP*SVLLFF
Trigger: GAAGAACAGCAGCACAGACCAGGGCAGCGACGAGGA...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTCCTCGTCGCTGCCCTaGTCTGTGCTGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLSSSLP*SVLLFF
Trigger: GAAGAACAGCAGCACAGACCAGGGCAGCGACGAGGA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGGTTGTGCTTGTCCATaGCGCTCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCGCACP*RSPAPS
Trigger: AGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAGGGGCATTGGGCGCTTaGACAGAAATGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRRLTKLLFWHSMKAFTRGALGA*TEMSGA
Trigger: GGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCC...TCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCACTGAGGGGCATTaGGCGCTTGGACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESGTEGH*ALGQKC
Trigger: ACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCC...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCCAAAACTCGGTACCTaGCGAACAGCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCPKLGT*RTAPGV
Trigger: CACTCCAGGAGCTGTTCGCCAGGTACCGAGTTTTGG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCCAAAACTCGGTACCTaGCGAACAGCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAPKLGT*RTAPGV
Trigger: CACTCCAGGAGCTGTTCGCCAGGTACCGAGTTTTGG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCATGACTCCGTGCAGATaGTGCTTGGAAATCGCCACG +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAMTPCR*CLEIAT
Trigger: CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCAT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCGAGAAACGATCAGGCTaGTCCAACTTGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLEKRSG*SNLPAA
Trigger: GGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTC...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTCATCAGCAGGTAGTTaGTGTGGGAGGCTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQSSAGS*CGRLAQ
Trigger: CTGCGCAAGCCTCCCACACCAACTACCTGCTGATGA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTGCTCCAGGAGGGCCTaGATGCAATCTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQCSRRA*MQSANV
Trigger: GACATTCGCAGATTGCATCCAGGCCCTCCTGGAGCA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTGCTCCAGGAGGGCCTaGATGCAATCTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESCSRRA*MQSANV
Trigger: GACATTCGCAGATTGCATCCAGGCCCTCCTGGAGCA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTCCAGGGGTCTGGCCTaGGGGTCTTCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDSRGLA*GSSLWM
Trigger: CATCCAGAGAGAAGACCCCCAGGCCAGACCCCTGGA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTCTGGAGGCTGCGCCTaGCCGCTCAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGSGGCA*PLSCSW
Trigger: CCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCTTTCCCGTGCTGCCTaGGAGATGTTGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSLSRAA*EMLAAP
Trigger: CGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGCCTGGTCATGATGTaGTACAGCATGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLGLVMM*YSMASI
Trigger: GATGGAGGCCATGCTGTACCACATCATGACCAGGCC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGGCCTGGTCATGATGTaGTACAGCATGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEGLVMM*YSMASI
Trigger: GATGGAGGCCATGCTGTACCACATCATGACCAGGCC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTAGGGACTCCAGGCCCTaGAGCAACTCCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTRDSRP*SNSSTA
Trigger: CGCCGTGCTGGAGTTGCTCCAGGGCCTGGAGTCCCT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTAGCACCAGGCAGGAGTaGTGTGGCAGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTSTRQE*CGRRWL
Trigger: CAGCCACCGCCTGCCACACCACTCCTGCCTGGTGCT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGAGGCGGGGCAAACTCTaGAGACCCAGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQERRGKL*RPRDKK
Trigger: CTTCTTGTCTCTGGGTCTCCAGAGTTTGCCCCGCCT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCTCTTGGTGGCACCTaGGCACTCAAGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQPLGGT*ALKEPG
Trigger: TCCTGGCTCCTTGAGTGCCCAGGTGCCACCAAGAGG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCCTGGGAGGCAACGATaGTCAGTTTCTTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDPGRQR*SVSSPT
Trigger: GGTGGGGGAAGAAACTGATCATCGTTGCCTCCCAGG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCATCCGTCCACTTTCTaGTCTAGAGGAAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVHPSTF*SRGSTQ
Trigger: CTGAGTGCTTCCTCTAGATCAGAAAGTGGACGGATG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCGCCTAGTGGGGTGTTaGGGCAGACGCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGRLVGC*GRRTAG
Trigger: ACCTGCAGTGCGTCTGCCTCAACACCCCACTAGGCG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCGCGGAAAGTCTGGAATaGCTGGTAGGACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: WLTRRRLTKLLFWHSMKAAESLE*LVGLHL
Trigger: CAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGC...GGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTTCTTCTGGCACTCCATaGAGGCCTTCACAAGAACGT +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVSSGTP*RPSQER
Trigger: ACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGA...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGTCCAGGGCCGTCCAGTaGAAAGGCCACCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQSRAVQ*KGHHVV
Trigger: AACGACATGGTGGCCTTTTCACTGGACGGCCCTGGA...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTCCAGGGCCGTCCAGTaGAAAGGCCACCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDSRAVQ*KGHHVV
Trigger: AACGACATGGTGGCCTTTTCACTGGACGGCCCTGGA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTCATCTGGCAGGAGTTaGCCACAATGCTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLSSGRS*PQCCRW
Trigger: CCAACGACAGCATTGTGGTCAACTCCTGCCAGATGA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCTCCAGCGCGTCCATTaGTACTTCAGTCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLLQRVH*YFSRRR
Trigger: GCGCCGCCGACTGAAGTAGCAATGGACGCGCTGGAG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCATTGTACAGCGAGGCTaGAAGGACTTGGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVIVQRG*KDLVLM
Trigger: CATCAGAACCAAGTCCTTGCAGCCTCGCTGTACAAT...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTCAGGGTGGATCTCTTaGAAGCGAAGAGACACCACC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQESGWIS*KRRDTT
Trigger: GGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTCAGGGTGGATCTCTTaGAAGCGAAGAGACACCACC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESSGWIS*KRRDTT
Trigger: GGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTACTTGGTGGTTCGCTaGCGACCTTCGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLYLVVR*RPSSSM
Trigger: CATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAAGAAGCGACTCCTCCTaGATAGACGCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGRSDSS*IDARLT
Trigger: CGTGAGCCTGGCGTCTATGCAGGAGGAGTCGCTTCT...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTCTCCGCTTGCTGCTaGTCCTCTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQLSACC*SSPPHC
Trigger: ACAGTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGGACAATGGACTTCTTaGAGCACTTGGTGGACACGC +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQGQWTS*STWWTR
Trigger: GCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCC...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCATCCGGAAGCGGACCTaGTCGATGGCACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLIRKRT*SMALLT
Trigger: AGTGAGAAGTGCCATCGAGCAGGTCCGCTTCCGGAT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTTGACTGTCTTCTTCTaGCTCCCCTTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLTVFF*LPLGHW
Trigger: CCAGTGCCCCAAGGGGAGGCAGAAGAAGACAGTCAA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCCCTGCCTGACTCCTaGTTTATCGTTCTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEALPDS*FIVLRS
Trigger: TGAACGGAGAACGATAAAGCAGGAGTCAGGCAGGGC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGATTGCGCTCCAGGTTGTaGTTGTCCATGGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGLRSRL*LSMALS
Trigger: GGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAA...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGA +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQSSPSS*IDQVTR
Trigger: TCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAGGCTGGTCCAACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATGACTCAGGCTGGTCCAACTTaGCGGCAGCCCGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: QAGPTCRQPAFCPKTGMTQAGPT*RQPAFC
Trigger: ACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG...AGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTCTACCACGATGATCTaGTCCGGGATCCTGACATCC +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQESTTMI*SGILTS
Trigger: GGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCGTCATCCTCCAGGCTaGCGTCCTTCCCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQRHPPG*RPSPSF
Trigger: AAAGCTTGGGGAAGGACGGCAGCCTGGAGGATGACG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTGGGAGGCTTaGGCAGGTTTCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLLVWEA*AGFTSM
Trigger: CATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGAGGCCGAGAACCGTCTaGGCAGCTCCTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQRPRTV*AAPPCQ
Trigger: TTGACAAGGAGGAGCTGCGCAGACGGTTCTCGGCCT...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCCAGGAGGGCCTGGATaGAATCTGCGAATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDPGGPG*NLRMSW
Trigger: CCAGGACATTCGCAGATTGCATCCAGGCCCTCCTGG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCCTCCATCATACCCTTaGATACAGGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGPPSYP*IQEGSG
Trigger: ACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGG...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGCTGGAATGTGAGGTGTaGACAGGCGGGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQLECEV*TGGANS
Trigger: AGAGTTTGCCCCGCCTGTGCACACCTCACATTCCAG...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGATCTTCATACCGGTCCTaGAGCTGTAGGTCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGSSYRS*SCRSGR
Trigger: GCGACCCGACCTACAGCTCCAGGACCGGTATGAAGA...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAGGAAATGTACTTGGTaGTTCGCTGCCGACCTTCGT +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPRKCTW*FAADLR
Trigger: ACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCGCAGGAAATGTACTTaGTGGTTCGCTGCCGACCTT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQERRKCT*WFAADL
Trigger: AAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCGGGCCTTCTCTCTTTaGTACTGCCGGCTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSRAFSL*YCRLRS
Trigger: CGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGTTCTGAGACGCTGCTaGTATCTAAGAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLVLRRC*YLRGCP
Trigger: GGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAAC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGAGACAAAGGACACGTTaGGTTCTGAGACGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQERQRTR*VLRRCW
Trigger: CCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGAGACAAAGGACACGTTaGGTTCTGAGACGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQRQRTR*VLRRCW
Trigger: CCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCT...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTTGCTGTCCGCACAGTaGGAGACAAAGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQELLSAQ*ETKDTL
Trigger: CAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTCGTGTGGTTTGTCTTaGCCTGAGCTGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLSCGLS*PELCLP
Trigger: TGGGAGGCACAGCTCAGGCCAAGACAAACCACACGA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTCTTGCAGCACTTGGTaGACACGCCTTCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQSCSTW*TRLPAS
Trigger: AGAAGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTACTTCTTGCAGCACTTaGTGGACACGCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEATSCST*WTRLPA
Trigger: AGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTGGCTGTGCTTGAATTaGAGATCCGGAAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQWLCLN*RSGSGP
Trigger: AGGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTTTCACTGATGAAGCTTaGCTTCTCCACGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGFTDEA*LLHGVA
Trigger: AGCAACACCGTGGAGAAGCCAAGCTTCATCAGTGAA...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGTTGGCTGCCTTTAGATaGGGCTTCAGAGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQLAAFR*GFRAGL
Trigger: GAGGCCTGCTCTGAAGCCCCATCTAAAGGCAGCCAA...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCATACACTGTCTCCGTaGCAAGCTCCACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLHTLSP*QAPLQP
Trigger: AGGCTGAAGTGGAGCTTGCCACGGAGACAGTGTATG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCCTGTGGACTGGGATTaGGGGGATGTAGCGCATCCA +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSPVDWD*GDVAHP
Trigger: TGGATGCGCTACATCCCCCCAATCCCAGTCCACAGG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAGGCACTGAGGGGCATTaGGCGCTTGGACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: RRRLTKLLFWHSMKAFTRGTEGH*ALGQKC
Trigger: ACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCC...TCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGAGCCGCTTCCGCTTCTaGCTTTTCCCACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQSRFRF*LFPPLT
Trigger: AGTGAGGGGTGGGAAAAGCCAGAAGCGGAAGCGGCT...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCTGCCAGGTGACAAATaGGCCCTTCACCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCLPGDK*ALHLGV
Trigger: AACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESTKLLF*HSMKAF
Trigger: GAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCATTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AFCPKTGMTPCRWCLEIALGPSV*LTRRRL
Trigger: CAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAA...GGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTCCAGGGGTCTGGCCTaGGGGTCTTCTCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVSRGLA*GSSLWM
Trigger: CATCCAGAGAGAAGACCCCCAGGCCAGACCCCTGGA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTCTCCCCATTCTCACTaGCCCAGCTGGCGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGSPHSH*PSWRAS
Trigger: AGAGGCGCGCCAGCTGGGCCAGTGAGAATGGGGAGA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCTCCGGGCCCAAGGCTaGGGGCCAAATTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVLRAQG*GPNLSP
Trigger: AGGACTCAAATTTGGCCCCCAGCCTTGGGCCCGGAG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGCCGCTCAGCTGCTCTTaGCCTGGGGAACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQPLSCS*PGELNS
Trigger: TGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGG...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356183.9
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGGCCTGGTCATGATGTaGTACAGCATGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCGLVMM*YSMASI
Trigger: GATGGAGGCCATGCTGTACCACATCATGACCAGGCC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTTCCAGTTGACCTCGTaGGGGAACACACGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVFQLTS*GNTRPS
Trigger: GCTGGGCCGTGTGTTCCCCCACGAGGTCAACTGGAA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGGCCCTTCCTCTTGGTaGCACCTGGGCACTCAAGGA +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVGPSSW*HLGTQG
Trigger: TCCTTGAGTGCCCAGGTGCCACCAAGAGGAAGGGCC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTTCCCAGCATCAACCTTaGAAGCAGTGGTGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEASQHQP*KQWCEG
Trigger: ACCTTCACACCACTGCTTTCAAGGTTGATGCTGGGA...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTCCGAAAGCTTCTCCATaGGGATGTCGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESPKASP*GCRICS
Trigger: GGAGCAAATACGACATCCTCATGGAGAAGCTTTCGG...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGCACTGTCTTGGAGATaGCCTCCTCGTCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQALSWR*PPRPRH
Trigger: ATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGGTCGTAGGTCTGTGTaGGCATATCCCGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQGRRSV*AYPART
Trigger: TGTTCGAGCGGGATATGCTCACACAGACCTACGACC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTGGTTTGTCTTGGCCTaGGCTGTGCCTCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSWFVLA*AVPPSL
Trigger: AAGACTGGGAGGCACAGCTCAGGCCAAGACAAACCA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCCAGGGTGCCCGTAGATaGGGTACCACAGAAACATGT +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLQGARR*GTTETC
Trigger: ACATGTTTCTGTGGTACCTCATCTACGGGCACCCTG...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCAGAGGAGGATGTCGCTaGCGAGAGCCCAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGRGGCR*REPSQS
Trigger: GCTTTGGCTGGGCTCTCGTCAGCGACATCCTCCTCT...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CGTACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATTGTCTGGAGCCTCACTGTaGGTCCATTCTCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RTTCQVTNGPFTLVLRTLSGASL*VHSLRQ
Trigger: CTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGA...CAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCCTTCACCTTGGTGTTaGGGACATTGCTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCPSPWC*GHCWQC
Trigger: GCATTGCCAGCAATGTCCTCAACACCAAGGTGAAGG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTAGGCCTGTGGGTTTTTaGCTATGTAGCGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESRPVGF*LCSELF
Trigger: GAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCT...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTCCAGGGCCGTCCAGTaGAAAGGCCACCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: RSLAPTRFHGHSASFAPLSRAVQ*KGHHVV
Trigger: AACGACATGGTGGCCTTTTCACTGGACGGCCCTGGA...AAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTCCACTTGTTCCAGTTaGCCTCGTGGGGGAACACAC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDSTCSS*PRGGTH
Trigger: GTGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGAGAGAAACTCCTGCGTaGAGGGTTCCAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQRETPA*RVPKAA
Trigger: CGCTGCCTTTGGAACCCTGCACGCAGGAGTTTCTCT...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCGCCAGAGAAACTCCTaGGTGCAGGGTTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVRQRNS*VQGSKG
Trigger: GCCTTTGGAACCCTGCACGCAGGAGTTTCTCTGGCG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCTCTCCGCTTGCTGCTaGTCCTCTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVLSACC*SSPPHC
Trigger: ACAGTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCGGGAAGGAGGGCGGCTaGTTTTTCAATGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSGKEGG*FFNGCR
Trigger: CCTACACCCATTGAAAAAGCAGCCGCCCTCCTTCCC...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGGGAAGGAGGGCGGCTaGTTTTTCAATGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQGKEGG*FFNGCR
Trigger: CCTACACCCATTGAAAAAGCAGCCGCCCTCCTTCCC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGCTTCTCCACGGTGTTaGTGGCAGGGTGCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGASPRC*WQGARR
Trigger: TCTACGGGCACCCTGCCAGCAACACCGTGGAGAAGC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTTGTACAGAAGCTGCTaGCGAATGGGCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSLYRSC*RMGLGR
Trigger: TCTCCCCAGGCCCATTCGGCAGCAGCTTCTGTACAA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTTGTGAGTCCATTCTCTaGGGCAGTGTTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGCESIL*GSVLLF
Trigger: AAAAAGGAGAACACTGCCGCAGAGAATGGACTCACA...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGA +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDSSPSS*IDQVTR
Trigger: TCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCT...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CGTACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATTGATGTCCCGTACCACCTaGCAGGTGACAAATGGGCCC +
Preference number: 4 (lower is better)
Translates to: RTTCQVTNGPFTLVLRTLMSRTT*QVTNGP
Trigger: GGGCCCATTTGTCACCTGGCAGGTGGTACGGGACAT...CAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR GCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTCTTCAAACGTGGCATaGAAAATGTCCCGTACCACC +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKASSNVA*KMSRTT
Trigger: GGTGGTACGGGACATTTTGCATGCCACGTTTGAAGA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAGGTTTCACCTCCATaGTCCGGCGCTTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGQVSPP*SGACPL
Trigger: TAGGGGGCAAGCGCCGGAGCATGGAGGTGAAACCTG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGATTGGTGTGGGAGGCTTaGGCAGGTTTCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGLVWEA*AGFTSM
Trigger: CATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAA...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGLVFLC*SRCSGV
Trigger: GACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLLLVFL*CSRCSG
Trigger: ACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCACAGTCCCTTTCCCGTaGTGCCTGGGAGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVTVPFP*CLGDVG
Trigger: GCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGT...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCACCGATCCCTATTCTaGAAGGTGTATCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCHRSLF*KVYPTR
Trigger: CCTTGTGGGATACACCTTGCAGAATAGGGATCGGTG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCTTCATTTCTGGCCTaGAAGGAATCACCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQSSFLA*KESPAR
Trigger: CCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTAAGGAGGTAAGGGGCTaGAGGAAACCCAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RSLAPTRFHGHSASFAPLKEVRG*RKPKPA
Trigger: TGCCGGCTTGGGTTTCCTGCAGCCCCTTACCTCCTT...AAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTCTTCATACCGGTCCTaGAGCTGTAGGTCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVSSYRS*SCRSGR
Trigger: GCGACCCGACCTACAGCTCCAGGACCGGTATGAAGA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTTCGGGATCCCCCTCCTaGCCTATCAAGGCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTSGSPS*PIKALY
Trigger: GTACAGGGCCTTGATAGGCCAGGAGGGGGATCCCGA...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCAGGATTGAGTGTTGCTaGGCTCCAGTGGGTAATCGG +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLRIECC*APVGNR
Trigger: CCGATTACCCACTGGAGCCCAGCAACACTCAATCCT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGAACACAATGTCCACTaGAGGCACTGTCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAEHNVH*RHCLGD
Trigger: ATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCCACCCACCCTTGGTTaGGGTGGAGTGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLPPTLG*GGVMRL
Trigger: CAGCCTCATCACTCCACCCCAACCAAGGGTGGGTGG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTACTGCTACTCTCCTTTaGGTTTTCCATCCGGACCTC +
Preference number: 4 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEATATLL*VFHPDL
Trigger: GAGGTCCGGATGGAAAACCCAAAGGAGAGTAGCAGT...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGCACCAAGCGGACAATaGACTTCTTGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQAPSGQ*TSCSTW
Trigger: CCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCACTAGAGGGTCGTTCTaGTCCATGGACGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVTRGSF*SMDGCT
Trigger: GGTGCACCCGTCCATGGACCAGAACGACCCTCTAGT...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGCAGGCGAGGCATTTTaGGCAGAAATCCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLAGEAF*AEILEN
Trigger: GTTCTCTAGGATTTCTGCCCAAAATGCCTCGCCTGC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTGACTTGCACAATCTaGATGAAGATGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALTCTI*MKMERG
Trigger: TCCCCTCTCCATCTTCATCCAGATTGTGCAAGTCAG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGGTGTCCGTAGAAGCTaGAATCGAGCCCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGGVRRS*NRALRH
Trigger: GTGCCGCAGGGCTCGATTCCAGCTTCTACGGACACC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCTTGGACAGAAATGTCTaGAGCCTCACTGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKALDRNV*SLTVSP
Trigger: TGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAA...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGGCACTGAGGGGCATTaGGCGCTTGGACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQGTEGH*ALGQKC
Trigger: ACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGAGCCGCTTCCGCTTCTaGCTTTTCCCACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVSRFRF*LFPPLT
Trigger: AGTGAGGGGTGGGAAAAGCCAGAAGCGGAAGCGGCT...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGAGCCGCTTCCGCTTCTaGCTTTTCCCACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: ALHEGLHKNVVLVLPIEASRFRF*LFPPLT
Trigger: AGTGAGGGGTGGGAAAAGCCAGAAGCGGAAGCGGCT...CGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGCGTGCAGATGGTGCTTaGAAATCGCCACGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLRADGA*KSPRKN
Trigger: ATTTTTACGTGGCGATTTCCAAGCACCATCTGCACG...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTATTCTGTCCAAAAACTaGAATGACTCCGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPILSKN*NDSVQM
Trigger: CATCTGCACGGAGTCATTCCAGTTTTTGGACAGAAT...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAGCTGGAACTTCATCTaGCAGGAGTTGACCACAATG +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPSWNFI*QELTTM
Trigger: CATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGCTGCAGGTGTTTTCCTaGGGGTTTATCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQELQVFS*GFISLV
Trigger: CACCAAGCTGATAAACCCCCAGGAAAACACCTGCAG...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGGCCAAATTTGAGTCCTaGAGCGCTGGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQAKFES*SAGLLA
Trigger: TGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGC...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCGCTCAGCTGCTCTTaGCCTGGGGAACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVPLSCS*PGELNS
Trigger: TGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGG...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGAGATGGCTAGAGTCTaGAATGTGAGGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESEMARV*NVRCAQ
Trigger: CTGTGCACACCTCACATTCCAGACTCTAGCCATCTC...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CAA 72 bp TGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTaGCTCCTCTTTACAGACAGGGCGTGGCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: WLLHAFMATVLP*LLFTDRAWLHL
Trigger: GAGGTGGAGCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CAA 72 bp GTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATaGCTGGCAATGCGGCACAGCACAAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: VTNGPFTLVLRT*LAMRHSTSSPS
Trigger: GGATGGGCTGCTTGTGCTGTGCCGCATTGCCAGCAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTCCCAGCATCAACCTTaGAAGCAGTGGTGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLSQHQP*KQWCEG
Trigger: ACCTTCACACCACTGCTTTCAAGGTTGATGCTGGGA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGGAGGAAGCACTCAGCTaGGAGTCCCCTGATCCACTT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVEEALS*ESPDPL
Trigger: AAGTGGATCAGGGGACTCTCAGCTGAGTGCTTCCTC...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGGCACACTTTATAGTTaGGATAGGCCTGTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAGTLYS*DRPVGF
Trigger: AAAACCCACAGGCCTATCTCAACTATAAAGTGTGCC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCTTCATCTGACTGTCTaGGAGGGCCAGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGLHLTV*EGQRAL
Trigger: CAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCVQKLE*LRADGA
Trigger: AGCACCATCTGCACGGAGTCATTCCAGTTTTTGGAC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQVQKLE*LRADGA
Trigger: AGCACCATCTGCACGGAGTCATTCCAGTTTTTGGAC...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGTGCCAGGCCTGGTCATaGTGTGGTACAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLCQAWS*CGTAWP
Trigger: AGGCCATGCTGTACCACATCATGACCAGGCCTGGCA...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGGCATGAGCCCTGGATaGCATCCTTATTCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEGMSPG*HPYSLR
Trigger: TCTTAGAGAATAAGGATGGCATCCAGGGCTCATGCC...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCAGGAGGATTGAGTGTTaGTGGGCTCCAGTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCRRIEC*WAPVGN
Trigger: ATTACCCACTGGAGCCCAGCAACACTCAATCCTCCT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTTCTCTCTTTGGTACTaGCGGCTTAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSFSLWY*RLRSLS
Trigger: GGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGTGGGTTCTGAGACGCTaGTGGTATCTAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQWVLRR*WYLRGC
Trigger: ACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCA...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCAGTCTTCAGGGAACTaGTACTCTCCTTTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: FLACKESPARLRDTDSQPQSSGN*YSPLGF
Trigger: AAAACCCAAAGGAGAGTAGCAGTTCCCTGAAGACTG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCGCCCTGCCTGACTCCTaGTTTATCGTTCTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSALPDS*FIVLRS
Trigger: TGAACGGAGAACGATAAAGCAGGAGTCAGGCAGGGC...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGACTGGAATGACTCCGTaGAGATGGTGCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLTGMTP*RWCLEI
Trigger: GATTTCCAAGCACCATCTGCACGGAGTCATTCCAGT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCGTCATCCTCCAGGCTaGCGTCCTTCCCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTRHPPG*RPSPSF
Trigger: AAAGCTTGGGGAAGGACGGCAGCCTGGAGGATGACG...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGCAAACTCCTCCAAGCTaGAGGTGTTTTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQQTPPS*RCFPGG
Trigger: ACCCCCAGGAAAACACCTGCAGCTTGGAGGAGTTTG...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAAACTCCTCCAAGCTaGAGGTGTTTTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSQTPPS*RCFPGG
Trigger: ACCCCCAGGAAAACACCTGCAGCTTGGAGGAGTTTG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTACAGTCCCTTTCCCGTaGTGCCTGGGAGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTTVPFP*CLGDVG
Trigger: GCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGGTAATCGGATCACATaGGACTGCATTGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAGNRIT*DCIVIS
Trigger: GCTGATTACAATGCAGTCCCATGTGATCCGATTACC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCACTCGGATTTCAGCTTaGGAAATTCCTTTCGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKATRISA*EIPFVP
Trigger: AGGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGTTCTGAGACGCTGCTaGTATCTAAGAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGVLRRC*YLRGCP
Trigger: GGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAAC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACGCACCAAGCGGACAATaGACTTCTTGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDAPSGQ*TSCSTW
Trigger: CCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGC...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTGGGGCACTGGAGGCTaGGAAGTTTTAACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDWGTGG*EVLTLL
Trigger: CAACAGGGTTAAAACTTCCCAGCCTCCAGTGCCCCA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGCTGCCAGGTGACAAATaGGCCCTTCACCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQLPGDK*ALHLGV
Trigger: AACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAG...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTAAGACTCTTCAAACGTaGCATGCAAAATGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGKTLQT*HAKCPV
Trigger: TACGGGACATTTTGCATGCCACGTTTGAAGAGTCTT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCG +
Preference number: 4 (lower is better)
Translates to: WLTRRRLTKLLFWHSMKAVEIGL*VFDYVA
Trigger: CGCTACATAGTCAAAAACCCACAGGCCTATCTCAAC...GGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDTKLLF*HSMKAF
Trigger: GAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCGTGCAGATGGTGCTTaGAAATCGCCACGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKARADGA*KSPRKN
Trigger: ATTTTTACGTGGCGATTTCCAAGCACCATCTGCACG...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTACAGAGAAACGATCAGGCTaGTCCAACTTGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PWLLHAFMATVLPLLLFTEKRSG*SNLPAA
Trigger: GGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTC...TGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTCATCAGCAGGTAGTTaGTGTGGGAGGCTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVSSAGS*CGRLAQ
Trigger: CTGCGCAAGCCTCCCACACCAACTACCTGCTGATGA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGAGCGAGACAGGCCTTaGCTTTCTCAGCCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGERDRP*LSQPAL
Trigger: AAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR TCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGCCGAAAGCTTCTCCATaGGGATGTCGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQPKASP*GCRICS
Trigger: GGAGCAAATACGACATCCTCATGGAGAAGCTTTCGG...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGTTCCACATCCTGCATTaGGTTCAGGACATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQFHILH*VQDIEA
Trigger: CGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAA...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GTWALKEPGDPAEMARVWHLFDS*NLQQVL
Trigger: AAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTG...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCTCCGAAACTCTCTGTaGACCCTCTGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLLRNSL*TLWGLQ
Trigger: CTGAAGACCCCAGAGGGTTCACAGAGAGTTTCGGAG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCAAACGTGTCAGTCTGTaGCTCTGGCCAAAGCACCCG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGKRVSL*LWPKHP
Trigger: CGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTT...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCTAGCCGTTCCAGGATaGAGTAGGAGAAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGLAVPG*SRRSRA
Trigger: TGCCCGACTTCTCCTACTGCATCCTGGAACGGCTAG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTTGTGAGTCCATTCTCTaGGGCAGTGTTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VAPGHSRSQEILPRWLESCESIL*GSVLLF
Trigger: AAAAAGGAGAACACTGCCGCAGAGAATGGACTCACA...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGA +
Preference number: 4 (lower is better)
Translates to: RPSQERGPCTPDRGGKSGSSPSS*IDQVTR
Trigger: TCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCT...TCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR GCA 90 bp TCTGGAATGACTGGTAGGACTTCATCTGACTGTCTGAGAGGGCCAGCGTGCTCTCTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGMTGRTSSDCLRGPACSLRGPA*SGSGSE
Trigger: TTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAG...AGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAGTCCTACCAGTCATTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCCCAGCGTCTCTATGTaGTTAGTCCGTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGPSVSM*LVRVLS
Trigger: GCTGAGCACACGGACTAACCACATAGAGACGCTGGG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGGGTCCACATTCAGGGTaGATCTCTTGCAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQGPHSG*ISCKRR
Trigger: TCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACC...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGACTCGGATTTCAGCTTaGGAAATTCCTTTCGTGCCT +
Preference number: 4 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQETRISA*EIPFVP
Trigger: AGGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTGGGGCACTGGAGGCTaGGAAGTTTTAACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVWGTGG*EVLTLL
Trigger: CAACAGGGTTAAAACTTCCCAGCCTCCAGTGCCCCA...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGGGCCAGGTTGTAATGTaGGTCGCAGATGGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVGQVVM*VADGSV
Trigger: GACACTACCATCTGCGACCCACATTACAACCTGGCC...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTTGGACAGAAATGTCTaGAGCCTCACTGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCLDRNV*SLTVSP
Trigger: TGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCG +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCVEIGL*VFDYVA
Trigger: CGCTACATAGTCAAAAACCCACAGGCCTATCTCAAC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp ATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCGGCAGCCCGATGACTCCGTGCAGATaGTGCTTGGAAATCGCCACG +
Preference number: 4 (lower is better)
Translates to: ILVFERETIRLVQLAGSPMTPCR*CLEIAT
Trigger: CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCAT...CGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTGGGGGTCTTCTCTCTaGATGTCGGCGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGWGSSL*MSASSL
Trigger: CAGAGAAGACGCCGACATCCAGAGAGAAGACCCCCA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCCTGGGAGATGTTaGCAGCTCCGAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTLPGRC*QLRNSL
Trigger: CAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAG...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR TCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCAGGGTGCCCGTAGATaGGGTACCACAGAAACATGT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLQGARR*GTTETC
Trigger: ACATGTTTCTGTGGTACCTCATCTACGGGCACCCTG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTTCCACATCCTGCATTaGGTTCAGGACATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVFHILH*VQDIEA
Trigger: CGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCCTTCACCTTGGTGTTaGGGACATTGCTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGPSPWC*GHCWQC
Trigger: GCATTGCCAGCAATGTCCTCAACACCAAGGTGAAGG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCHLFDS*NLQQVL
Trigger: AAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCTCTGGATCAGGTTCTaGAGCACCAGAAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVLWIRF*STRKWM
Trigger: CATCCACTTTCTGGTGCTTCAGAACCTGATCCAGAG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp AATGTCCCGTACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGCTCTGGATCAGGTTCTaGAGCACCAGAAAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NVPYHLPGDKWALHLGVELWIRF*STRKWM
Trigger: CATCCACTTTCTGGTGCTTCAGAACCTGATCCAGAG...CTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTACGGGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp TCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAATGACTCTTCATCTGACTGTCTaGGAGGGCCAGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQERGPCTPDRGGKSGMTLHLTV*EGQRAL
Trigger: CAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAG...AGTCATTCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGCGGAAAGTCTGGAATaGCTGGTAGGACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVAESLE*LVGLHL
Trigger: CAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTCATTCTCCACCATTaGGCTGTCTACCACGATGAT +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQLILHH*AVYHDD
Trigger: ATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGGTTTATCAGCTTGGTaGACGTATCAGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLGLSAW*TYQGGR
Trigger: CCTGCCTCCCTGATACGTTCACCAAGCTGATAAACC...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGGACAATGGACTTCTTaGAGCACTTGGTGGACACGC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLGQWTS*STWWTR
Trigger: GCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCC...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTCTTCAAACGTGGCATaGAAAATGTCCCGTACCACC +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDSSNVA*KMSRTT
Trigger: GGTGGTACGGGACATTTTGCATGCCACGTTTGAAGA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGAAATCTCCAACAAGTaGTTTATCCTGGTACACCTC +
Preference number: 4 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCEISNK*FILVHL
Trigger: GAGGTGTACCAGGATAAAGCACTTGTTGGAGATTTC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGCCTCCATCATACCCTTaGATACAGGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQPPSYP*IQEGSG
Trigger: ACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGG...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCTAAGATCATATGAATaGGGTAGACATCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVLRSYE*GRHPPK
Trigger: CTTTGGAGGATGTCTACCCCATTCATATGATCTTAG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTAGGATTGAGTGTTGCTaGGCTCCAGTGGGTAATCGG +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTRIECC*APVGNR
Trigger: CCGATTACCCACTGGAGCCCAGCAACACTCAATCCT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGGTCCACATTCAGGGTaGATCTCTTGCAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVGPHSG*ISCKRR
Trigger: TCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGAACACAATGTCCACTaGAGGCACTGTCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQEHNVH*RHCLGD
Trigger: ATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCGCAGGAAATGTACTTaGTGGTTCGCTGCCGACCTT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGRRKCT*WFAADL
Trigger: AAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTTGCTGTCCGCACAGTaGGAGACAAAGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGLLSAQ*ETKDTL
Trigger: CAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTCTTGCAGCACTTGGTaGACACGCCTTCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGSCSTW*TRLPAS
Trigger: AGAAGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCAGGTGACACCATCTTaGCTGCCTTTAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLQVTPS*LPLDGA
Trigger: AGCCCCATCTAAAGGCAGCCAAGATGGTGTCACCTG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGGCCAGGTTGTAATGTaGGTCGCAGATGGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLGQVVM*VADGSV
Trigger: GACACTACCATCTGCGACCCACATTACAACCTGGCC...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCTGGCGAACAGCTCCTaGAGTGTGTCTGGGATTTCA +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGLANSS*SVSGIS
Trigger: TGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGATTCTGTCCAAAAACTaGAATGACTCCGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQILSKN*NDSVQM
Trigger: CATCTGCACGGAGTCATTCCAGTTTTTGGACAGAAT...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CAGGAAACCCAAGCCGGCATCTTGCACATGAGGCTGCGAAGGTCCCTGGCTCCTATTCTGTCCAAAAACTaGAATGACTCCGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: QETQAGILHMRLRRSLAPILSKN*NDSVQM
Trigger: CATCTGCACGGAGTCATTCCAGTTTTTGGACAGAAT...AGGAGCCAGGGACCTTCGCAGCCTCATGTGCAAGATGCCGGCTTGGGTTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGGCTCGTTATTATCCTaGTCTTTGAAAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAGSLLS*SLKEKR
Trigger: TCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGCTCGTTATTATCCTaGTCTTTGAAAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVGSLLS*SLKEKR
Trigger: TCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCC...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSRVPVQ*ETCQSV
Trigger: CACAGACTGACACGTTTCCCACTGTACTGGAACTCT...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAGGGCCGTCCAGTGAAAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTCCTACACGCTTTCATaGCCACAGTGCTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PGPSSEKATMSFVGSLLSSYTLS*PQCFLC
Trigger: GCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGA...GGATAATAACGAGCCCACAAACGACATGGTGGCCTTTTCACTGGACGGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGACAACTTTGAATCTTTaGAGAAGTCGGCACAGCATT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLTTLNL*RSRHSI
Trigger: AATGCTGTGCCGACTTCTTCAAAGATTCAAAGTTGT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGTTCTTGATGCCATCTTaGATGACAGTGGTCCGATAC +
Preference number: 4 (lower is better)
Translates to: LFISGLQGITSQAEGHGQFLMPS*MTVVRY
Trigger: GTATCGGACCACTGTCATTCAAGATGGCATCAAGAA...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCATCCGTCCACTTTCTaGTCTAGAGGAAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGHPSTF*SRGSTQ
Trigger: CTGAGTGCTTCCTCTAGATCAGAAAGTGGACGGATG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGCTTCGTCCAACGGAATaGGATGTTTTATCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQLRPTE*DVLSKD
Trigger: GTCTTTGGATAAAACATCTCATTCCGTTGGACGAAG...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAATGACTGGTAGGAGGCCTGTGGGTTTTTaGCTATGTAGCGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ERGPCTPDRGGKSGMTGRRPVGF*LCSELF
Trigger: GAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCT...CCTACCAGTCATTCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp GGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGCTTCATCTGACTGTCTaGGAGGGCCAGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GHHVVCGLVIILVFERETLHLTV*EGQRAL
Trigger: CAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAG...CGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp CCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTACAGCGGAAAGTCTGGAATaGCTGGTAGGACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PWLLHAFMATVLPLLLFTAESLE*LVGLHL
Trigger: CAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGC...TGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp TACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATTGCTTCTTCTGGCACTCCATaGAGGCCTTCACAAGAACGT +
Preference number: 4 (lower is better)
Translates to: YHLPGDKWALHLGVEDIASSGTP*RPSQER
Trigger: ACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGA...AGCAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTATTATCCTGGTCTTTaGAAGAGAAACGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLYYPGL*KRNDQA
Trigger: AGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCACTGGAATGACTCCGTaGAGATGGTGCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVTGMTP*RWCLEI
Trigger: GATTTCCAAGCACCATCTGCACGGAGTCATTCCAGT...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGGTAATCGGATCACATaGGACTGCATTGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGGNRIT*DCIVIS
Trigger: GCTGATTACAATGCAGTCCCATGTGATCCGATTACC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCAGGAAATGTACTTGGTaGTTCGCTGCCGACCTTCGT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGRKCTW*FAADLR
Trigger: ACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCT...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTTCACTGATGAAGCTTaGCTTCTCCACGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVFTDEA*LLHGVA
Trigger: AGCAACACCGTGGAGAAGCCAAGCTTCATCAGTGAA...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGCTGACTTGCACAATCTaGATGAAGATGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVLTCTI*MKMERG
Trigger: TCCCCTCTCCATCTTCATCCAGATTGTGCAAGTCAG...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGTTGGCACAAACCTTTaGGTCATCATAGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: GLFISGLQGITSQAEGHGVGTNL*VIIVTS
Trigger: AGAGGTGACTATGATGACCCAAAGGTTTGTGCCAAC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGACAACTTTGAATCTTTaGAGAAGTCGGCACAGCATT +
Preference number: 4 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQTTLNL*RSRHSI
Trigger: AATGCTGTGCCGACTTCTTCAAAGATTCAAAGTTGT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGGGCACACTTTATAGTTaGGATAGGCCTGTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVGTLYS*DRPVGF
Trigger: AAAACCCACAGGCCTATCTCAACTATAAAGTGTGCC...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCGGATCACATGGGACTaGATTGTAATCAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTRITWD*IVISPF
Trigger: AAACGGGCTGATTACAATGCAGTCCCATGTGATCCG...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp CCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTACAACTGGAATGACTCCGTaGAGATGGTGCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: PWLLHAFMATVLPLLLFTTGMTP*RWCLEI
Trigger: GATTTCCAAGCACCATCTGCACGGAGTCATTCCAGT...TGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR GCA 90 bp TTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCACGTCTACCACGATGATCTaGTCCGGGATCCTGACATCC +
Preference number: 4 (lower is better)
Translates to: FCPKTGMTPCRWCLEIATSTTMI*SGILTS
Trigger: GGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGA...CGTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR GCA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCCTCCATCATACCCTTaGATACAGGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGPPSYP*IQEGSG
Trigger: ACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTCCTCGTCATCATCATaGTCATTCCGTTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLSSSSS*SFRLNS
Trigger: GGAATTTAAACGGAATGACCATGATGATGACGAGGA...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCG +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVVEIGL*VFDYVA
Trigger: CGCTACATAGTCAAAAACCCACAGGCCTATCTCAAC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCTCCTGGAGTGTGTCTaGGATTTCAAGGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDLLECV*DFKVRI
Trigger: AATTCTAACCTTGAAATCCCAGACACACTCCAGGAG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCTCCTGGAGTGTGTCTaGGATTTCAAGGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSLLECV*DFKVRI
Trigger: AATTCTAACCTTGAAATCCCAGACACACTCCAGGAG...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GCCACACAATTTCCTCCAGGGCCGTCCAGTGAAAAGGCCACCATGTCGTTTGTGCGTGCAGATGGTGCTTaGAAATCGCCACGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ATQFPPGPSSEKATMSFVRADGA*KSPRKN
Trigger: ATTTTTACGTGGCGATTTCCAAGCACCATCTGCACG...CACAAACGACATGGTGGCCTTTTCACTGGACGGCCCTGGAGGAAATTGTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGCCACCATGTCGTTTGTaGGCTCGTTATTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLPPCRL*ARYYPG
Trigger: ACCAGGATAATAACGAGCCCACAAACGACATGGTGG...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTRVPVQ*ETCQSV
Trigger: CACAGACTGACACGTTTCCCACTGTACTGGAACTCT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGAGAGTTCCAGTACAGTaGGAAACGTGTCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLRVPVQ*ETCQSV
Trigger: CACAGACTGACACGTTTCCCACTGTACTGGAACTCT...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CCA 90 bp TCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGGGCTGCGAAGGTCCCTaGCTCCTACACGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SFVGSLLSWSLKEKRSGWGCEGP*LLHAFM
Trigger: CATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAGCC...CCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCTTCGTCCAACGGAATaGGATGTTTTATCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVLRPTE*DVLSKD
Trigger: GTCTTTGGATAAAACATCTCATTCCGTTGGACGAAG...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR TCA 90 bp ATTGAGCTGTCTACCACGATGATCTGCTCCGGGATCCTGACATCCACAGAAATGGTCCAAAAACTGGAATaGCTCCGTGCAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: IELSTTMICSGILTSTEMVQKLE*LRADGA
Trigger: AGCACCATCTGCACGGAGTCATTCCAGTTTTTGGAC...CATTTCTGTGGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACTATTATCCTGGTCTTTaGAAGAGAAACGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: DSSFLACKESPARLRDTDYYPGL*KRNDQA
Trigger: AGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATA...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp TACCACCTGCCAGGTGACAAATGGGCCCTTCACCTTGGTGTTGAGGACATTGCTTGTGAGTCCATTCTCTaGGGCAGTGTTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YHLPGDKWALHLGVEDIACESIL*GSVLLF
Trigger: AAAAAGGAGAACACTGCCGCAGAGAATGGACTCACA...AGCAATGTCCTCAACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAGGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR GCA 90 bp GTTCTGAAGCACCAGAAAGTGGATGTCATCCACGCTGTTAAGTTCATCCTCTTTCGGTCCACCTCAAACTaGTCTTCCCAGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VLKHQKVDVIHAVKFILFRSTSN*SSQPAQ
Trigger: CTGTGCTGGCTGGGAAGAGCAGTTTGAGGTGGACCG...AAAGAGGATGAACTTAACAGCGTGGATGACATCCACTTTCTGGTGCTTCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTGCGTTCAGCATATACTaGTACAGACGCTTAAACGTC +
Preference number: 4 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTAFSIY*YRRLNV
Trigger: GACGTTTAAGCGTCTGTACCAGTATATGCTGAACGC...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTCCTCGTCATCATCATaGTCATTCCGTTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: SSFLACKESPARLRDTDSSSSSS*SFRLNS
Trigger: GGAATTTAAACGGAATGACCATGATGATGACGAGGA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp GATAGAGGCGGAAAGTCTGGAATGACTGGTAGGACTTCATCTGACTGTCTGAGACTGCCAGGTGACAAATaGGCCCTTCACCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: DRGGKSGMTGRTSSDCLRLPGDK*ALHLGV
Trigger: AACACCAAGGTGAAGGGCCCATTTGTCACCTGGCAG...TCTCAGACAGTCAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGCCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCAAGACTCTTCAAACGTaGCATGCAAAATGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVKTLQT*HAKCPV
Trigger: TACGGGACATTTTGCATGCCACGTTTGAAGAGTCTT...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CCA 90 bp CCAGCGTGCTCTGGATCAGGTTCTGAAGCACCAGAAAGTGGATGTCATCCACGCAAGACTCTTCAAACGTaGCATGCAAAATGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: PACSGSGSEAPESGCHPRKTLQT*HAKCPV
Trigger: TACGGGACATTTTGCATGCCACGTTTGAAGAGTCTT...GCGTGGATGACATCCACTTTCTGGTGCTTCAGAACCTGATCCAGAGCACGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGTTGGCACAAACCTTTaGGTCATCATAGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLVGTNL*VIIVTS
Trigger: AGAGGTGACTATGATGACCCAAAGGTTTGTGCCAAC...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
3UTR CAA 72 bp TGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTaGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: WSLKEKRSGWSN*PAARILSKNWN
Trigger: ATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp GAACGTGGTCCTTGTACTCCCGATAGAGGCGGAAAGTCTGGAATGACTGGTAGGCTTCGTCCAACGGAATaGGATGTTTTATCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ERGPCTPDRGGKSGMTGRLRPTE*DVLSKD
Trigger: GTCTTTGGATAAAACATCTCATTCCGTTGGACGAAG...CCTACCAGTCATTCCAGACTTTCCGCCTCTATCGGGAGTACAAGGACCACGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp GTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTCTTCTGGCACTCCATaGAGGCCTTCACAAGAACGT +
Preference number: 4 (lower is better)
Translates to: VGSLLSWSLKEKRSGWSNSSGTP*RPSQER
Trigger: ACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGA...GTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp ACTTGCCGGCAGCCCGCATTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTATTATCCTGGTCTTTaGAAGAGAAACGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: TCRQPAFCPKTGMTPCRWYYPGL*KRNDQA
Trigger: AGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATA...CCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGCGGGCTGCCGGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR GCA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGAAATCTCCAACAAGTaGTTTATCCTGGTACACCTC +
Preference number: 4 (lower is better)
Translates to: APLSRVPVQWETCQSVTLEISNK*FILVHL
Trigger: GAGGTGTACCAGGATAAAGCACTTGTTGGAGATTTC...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR GCA 90 bp AAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAACTGAGAGGGCCAGCGTaGTCTGGATCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KGHHVVCGLVIILVFERELRGPA*SGSGSE
Trigger: TTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAG...TTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp TCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGACCAAGCTCCTCTTCTaGCACTCCATGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SFVGSLLSWSLKEKRSGWTKLLF*HSMKAF
Trigger: GAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGT...CCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp AGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTGGCTCGTTATTATCCTaGTCTTTGAAAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: RSLAPTRFHGHSASFAPLGSLLS*SLKEKR
Trigger: TCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCC...AAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
3UTR CAA 72 bp ACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTaGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCG +
Preference number: 4 (lower is better)
Translates to: TMSFVGSLLSWS*KEKRSGWSNLP
Trigger: CGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp GTTCTGAAGCACCAGAAAGTGGATGTCATCCACGCTGTTAAGTTCATCCTCTTTCCTTCACCTTGGTGTTaGGGACATTGCTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: VLKHQKVDVIHAVKFILFPSPWC*GHCWQC
Trigger: GCATTGCCAGCAATGTCCTCAACACCAAGGTGAAGG...AAAGAGGATGAACTTAACAGCGTGGATGACATCCACTTTCTGGTGCTTCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CCA 90 bp GATAGAGGCGGAAAGTCTGGAATGACTGGTAGGACTTCATCTGACTGTCTGAGATTGGACAGAAATGTCTaGAGCCTCACTGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DRGGKSGMTGRTSSDCLRLDRNV*SLTVSP
Trigger: TGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAA...TCTCAGACAGTCAGATGAAGTCCTACCAGTCATTCCAGACTTTCCGCCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR TCA 90 bp CTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCCTCATTCTCCACCATTaGGCTGTCTACCACGATGAT +
Preference number: 4 (lower is better)
Translates to: LVIILVFERETIRLVQLALILHH*AVYHDD
Trigger: ATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAG...GGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp ACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAAGTACCCAAGGCTCCTaGCAGGTACTCACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TMSFVGSLLSWSLKEKRSSTQGS*QVLTCS
Trigger: ACTACAGGTGAGTACCTGTCAGGAGCCTTGGGTACT...TGATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CCA 90 bp AAAGGCCACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAACCACCATGTCGTTTGTaGGCTCGTTATTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGHHVVCGLVIILVFEREPPCRL*ARYYPG
Trigger: ACCAGGATAATAACGAGCCCACAAACGACATGGTGG...TTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR TCA 90 bp TCTTCGTCCAACGGAATGAGATGTTTTATCCAAAGACTCTTCAAACGTGGCATGCTCGGTACTTATAGTTaGGATAGGCCTGTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSSNGMRCFIQRLFKRGMLGTYS*DRPVGF
Trigger: AAAACCCACAGGCCTATCTCAACTATAAGTACCGAG...CATGCCACGTTTGAAGAGTCTTTGGATAAAACATCTCATTCCGTTGGACGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPAGPSVW*TRRRLT
Trigger: GGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: ARFFLGPSVWLTRRRLTKGPSVW*TRRRLT
Trigger: GGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCC...CTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS CCA 90 bp GCGCCCTGGGCATTCTGGAAGCGCAGCCCTCATTCCAGGCCGACCTaGGCACTGCCAGTGCTCAGCACGCCTGCTGCTCGCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: APWAFWKRSPHSRPT*ALPVLSTPAARPLR
Trigger: GCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCCAGAATGCCCAGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp AAGCTGATGCCCGGGTGCGTGGCGAGGGCCCGCCAGAGAAACTCCTaGGTGCAGGGTTCCAAAGGCAGCGGGAAGGGCGGCACTCGCGTC +
Preference number: 5 (lower is better)
Translates to: KLMPGCVARARQRNS*VQGSKGSGKGGTRV
Trigger: GACGCGAGTGCCGCCCTTCCCGCTGCCTTTGGAACCCTGCACGCAGGAGTTTCTCTGGCGGGCCCTCGCCACGCACCCGGGCATCAGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp AGGGCGTGCTGCCACCCGAGGAAGTTGAGACCCCCATGCCATCACTaGCCCACAGCAGCCGCTGCAGTGCACACGCTGGCCCCACCGCCT +
Preference number: 5 (lower is better)
Translates to: RACCHPRKLRPPCHH*PTAAAAVHTLAPPP
Trigger: AGGCGGTGGGGCCAGCGTGTGCACTGCAGCGGCTGCTGTGGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp CCTGGAGGTGGCAGGGCCGGGCAGACTGCCGCACACAGCGCCACATaGAAGCAGCGTCCCAGGCCCGGACAAGCCCCACATTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGGGRAGQTAAHSAT*KQRPRPGQAPHCRK
Trigger: CTTCCTGCAATGTGGGGCTTGTCCGGGCCTGGGACGCTGCTTGCATGTGGCGCTGTGTGCGGCAGTCTGCCCGGCCCTGCCACCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp CGACCTGGGCACTGCCAGTGCTCAGCACGCCTGCTGCTCGCCCACTaGGCCCCTCCAAGTACCCCTGCCAAGAACCAAGGTGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPGHCQCSARLLLAH*APPSTPAKNQGAGQ
Trigger: CTGCCCGGCACCTTGGTTCTTGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp GGGCATTCTGGAAGCGCAGCCCTCATTCCAGGCCGACCTGGGCACTaGCAGTGCTCAGCACGCCTGCTGCTCGCCCACTGCGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GHSGSAALIPGRPGH*QCSARLLLAHCAPP
Trigger: TGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCCAGAATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp CAGCGGGAAGGGCGGCACTCGCGTCTCCAGCCGGCTCCACAGCGCTaGCAGACACAGGCCATCGAGCCCCTCCAGAGCGACTTCGTCCAA +
Preference number: 5 (lower is better)
Translates to: QREGRHSRLQPAPQR*QTQAIEPLQSDFVQ
Trigger: TTGGACGAAGTCGCTCTGGAGGGGCTCGATGGCCTGTGTCTGCCAGCGCTGTGGAGCCGGCTGGAGACGCGAGTGCCGCCCTTCCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp CCTGGAGCTGTAGGTCGGGTCGCTCCCGAGGCTCCTCATAGAAGCTaGTGCCCGGGTGCGTGGCGAGGGCCCGCCAGAGAAACTCCTGCG +
Preference number: 5 (lower is better)
Translates to: PGAVGRVAPEAPHRS*CPGAWRGPARETPA
Trigger: CGCAGGAGTTTCTCTGGCGGGCCCTCGCCACGCACCCGGGCATCAGCTTCTATGAGGAGCCTCGGGAGCGACCCGACCTACAGCTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp GGAGCCAAGGCCAGGCAGAGCCCATGGCTACCAGGCGCGCAGTGTTaGCACCGACCTCCAGCACCTGATGCTGCTCCAGGAGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GAKARQSPWLPGAQC*HRPPAPDAAPGGPG
Trigger: TCCAGGCCCTCCTGGAGCAGCATCAGGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGGTAGCCATGGGCTCTGCCTGGCCTTGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp CCCTCATTCCAGGCCGACCTGGGCACTGCCAGTGCTCAGCACGCCTaGTGCTCGCCCACTGCGCCCCTCCAAGTACCCCTGCCAAGAACC +
Preference number: 5 (lower is better)
Translates to: PSFQADLGTASAQHA*CSPTAPLQVPLPRT
Trigger: GGTTCTTGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp TCTGGAAGCGCAGCCCTCATTCCAGGCCGACCTGGGCACTGCCAGTaGTCAGCACGCCTGCTGCTCGCCCACTGCGCCCCTCCAAGTACC +
Preference number: 5 (lower is better)
Translates to: SGSAALIPGRPGHCQ*SARLLLAHCAPPST
Trigger: GGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp GCGGCAGCGGGCCTGAGCCGGGCGGGCACAGGGGTGCAGCGGAGCTaGAACTTCATCTGGCAGGAGTTGACCACAATGCTGTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AAAGLSRAGTGVQRS*NFIWQELTTMLSLG
Trigger: CCCCAACGACAGCATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGCCCGGCTCAGGCCCGCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAGGGCCCGGTTCTTCTaGGGGCCCAGCGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPARARFF*GPSVWL
Trigger: CAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp CTCAGCACGCCTGCTGCTCGCCCACTGCGCCCCTCCAAGTACCCCTaGCAAGAACCAAGGTGCCGGGCAGGCTGTCAGAGCTGGTACCTG +
Preference number: 5 (lower is better)
Translates to: LSTPAARPLRPSKYP*QEPRCRAGCQSWYL
Trigger: CAGGTACCAGCTCTGACAGCCTGCCCGGCACCTTGGTTCTTGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp CCATCTTCAGCTCCGGGCCCAAGGCTGGGGGCCAAATTTGAGTCCTaGAGCGCTGGCCTCTTGGCAGGGGTCATCTGGGTGCCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PSSAPGPRLGAKFES*SAGLLAGVIWVPSA
Trigger: CGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGCCCCCAGCCTTGGGCCCGGAGCTGAAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 90 bp CGCGCGGTACCTCTGGGGTCTTCAGAGCCCTCTGGAGGCTGCGCCTaGCCGCTCAGCTGCTCTTGGCCTGGGGAACTGAACTCACCGACA +
Preference number: 5 (lower is better)
Translates to: RAVPLGSSEPSGGCA*PLSCSWPGELNSPT
Trigger: TGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGACCCCAGAGGTACCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGACTCCAGCGCGTCCATaGCTACTTCAGTCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLTPARP*LLQSAA
Trigger: CGCCGCCGACTGAAGTAGCAATGGACGCGCTGGAGT...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ARFFLGPSVWLTRRRLTKLTRRR*TKLLFW
Trigger: CCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAA...CTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGTCAGGCTGGTCCAACTaGCCGGCAGCCCGCATTCTG +
Preference number: 5 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRSGWSN*PAARIL
Trigger: CAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGA...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp GCTGGAGCTCCCCTTGCCACCTGGACCGGCCTAGCCGTTCCAGGATaGAGTAGGAGAAGTCGGGCAGCTTCAGGTCGGGATCCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: AGAPLATWTGLAVPG*SRRSRAASGRDPPP
Trigger: AGGAGGGGGATCCCGACCTGAAGCTGCCCGACTTCTCCTACTGCATCCTGGAACGGCTAGGCCGGTCCAGGTGGCAAGGGGAGCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp AATTTGAGTCCTGGAGCGCTGGCCTCTTGGCAGGGGTCATCTGGGTaGCCTCGGCGTCGGTCTCCCCATTCTCACTGGCCCAGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: NLSPGALASWQGSSG*PRRRSPHSHWPSWR
Trigger: GCGCCAGCTGGGCCAGTGAGAATGGGGAGACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp TCATTCCAGGCCGACCTGGGCACTGCCAGTGCTCAGCACGCCTGCTaGTCGCCCACTGCGCCCCTCCAAGTACCCCTGCCAAGAACCAAG +
Preference number: 5 (lower is better)
Translates to: SFQADLGTASAQHAC*SPTAPLQVPLPRTK
Trigger: CTTGGTTCTTGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp ACTGCATGTTGCCTGGGGCCTGAACATCACAGCCGGGCCACTGAGTaGACCCAGCCGCCTCCACACCCTGCTGAACCCAGGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TACCLGPEHHSRATE*TQPPPHPAEPRKAP
Trigger: TGGGGCCTTCCTGGGTTCAGCAGGGTGTGGAGGCGGCTGGGTGCACTCAGTGGCCCGGCTGTGATGTTCAGGCCCCAGGCAACATGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp ATTGGCACGAAGGGGAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: IGTKGRARFFLGPSV*LTRRRLTKLLFWHS
Trigger: GGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569394.5
ENST00000571886.1
CDS CCA 90 bp CCTCGTGGGGGAACACACGGCCCAGCCGGAGGGTACAGTCCAAGGTaGGCTCATAGAAAGCCATGGGGCTCTCGTCCAGGCTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PRGGTHGPAGGYSPR*AHRKPWGSRPGWRA
Trigger: TGCCCTCCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGCCCACCTTGGACTGTACCCTCCGGCTGGGCCGTGTGTTCCCCCACGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 90 bp GCTGACAGCACCAGGCATGGTTCTCCACCAGCGCCCTGGGCATTCTaGAAGCGCAGCCCTCATTCCAGGCCGACCTGGGCACTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ADSTRHGSPPAPWAF*KRSPHSRPTWALPV
Trigger: CACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCCAGAATGCCCAGGGCGCTGGTGGAGAACCATGCCTGGTGCTGTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGATAGCTGGTAGGACATaGGCACGAAGGGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLIAGRT*ARRGGP
Trigger: GGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTAT...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCTCCATGCTCCGGCGCTaGCCCCCTACACCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVSMLRR*PPTPSS
Trigger: GGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGGA...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGATGCTGTCGTTGGGGTaGAGGTTGCGGGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRMLSLG*RLRVLT
Trigger: CGTCAGCACCCGCAACCTCAACCCCAACGACAGCAT...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTACCAGGCGCGCAGTGTaGCCACCGACCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVTRRAV*PPTSST
Trigger: GGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGGT...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTCACCGACACCCTCTaGGTCTTCCTGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLTDTL*VFLCCS
Trigger: GGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356183.9
CDS GCA 90 bp CTGGGGTCTTCAGAGCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTaGTCTTGGCCTGGGGAACTGAACTCACCGACACCCTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: LGSSEPSGGCAWPLS*SWPGELNSPTPSWS
Trigger: AGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000562609.2
ENST00000569653.1
CDS GCA 90 bp ATGTACCAGGAGGGTTCAGGCAAAGGCCCTGGTGGGAGAGGCAGCTaGCTGAGCAGCACGTGTACAGCGCTGGCTGGAGCCACCACGCTG +
Preference number: 5 (lower is better)
Translates to: MYQEGSGKGPGGRGS*LSSTCTALAGATTL
Trigger: CAGCGTGGTGGCTCCAGCCAGCGCTGTACACGTGCTGCTCAGGCAGCTGCCTCTCCCACCAGGGCCTTTGCCTGAACCCTCCTGGTACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp GCCAAATTTGAGTCCTGGAGCGCTGGCCTCTTGGCAGGGGTCATCTaGGTGCCCTCGGCGTCGGTCTCCCCATTCTCACTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AKFESWSAGLLAGVI*VPSASVSPFSLAQL
Trigger: CAGCTGGGCCAGTGAGAATGGGGAGACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 90 bp AGAGCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTTGGCCTaGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: RALWRLRLAAQLLLA*GTELTDTLLVFLCC
Trigger: GCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS CCA 90 bp ATGGTTGTCCCGGGGGCAGCTGGGCATTCAGGGCTTATCCCTCTGTaGACCCCTGGCTCATCTGCAGGAGTGGGTGAGGTGCCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: MVVPGAAGHSGLIPL*TPGSSAGVGEVPVG
Trigger: GCCCACAGGCACCTCACCCACTCCTGCAGATGAGCCAGGGGTCCACAGAGGGATAAGCCCTGAATGCCCAGCTGCCCCCGGGACAACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp GAGCTCTTGAAAGCCAGGACACAGGGCACTTGGGCCCTGCCAATCTaGGGTCAGCACACACACTCATGGGAGGCGCCCCCACCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: ELLKARTQGTWALPI*GQHTHSWEAPPPEG
Trigger: CCCCTCTGGTGGGGGCGCCTCCCATGAGTGTGTGTGCTGACCCCAGATTGGCAGGGCCCAAGTGCCCTGTGTCCTGGCTTTCAAGAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp TTTCTCAGCCAGCGCTTCCGGATGCAGCCGAGGGACTCCAGGCCCTaGAGACACCAGACACACAGGTTACAGCGGCACTGCCCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: FLSQRFRMQPRDSRP*RHQTHRLQRHCPRL
Trigger: CAGGCGAGGGCAGTGCCGCTGTAACCTGTGTGTCTGGTGTCTCCAGGGCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGCTGAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGACTGGAGGCACTGTCTaGGAGATGACCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLTGGTV*EMTSSS
Trigger: GGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGT...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCTATGTCACCACTGTaGCTGTCCGCACAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPAAMSPL*LSAQWE
Trigger: CTCCCACTGTGCGGACAGCAACAGTGGTGACATAGC...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGACCAGGCGCGCAGTGTaGCCACCGACCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQETRRAV*PPTSST
Trigger: GGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGGT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGGGCTGGGGGCCAAATTaGAGTCCTGGAGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GTWALKEPGDPAEMARVWGWGPN*SPGALA
Trigger: GGCCAGCGCTCCAGGACTCAAATTTGGCCCCCAGCC...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp CAGGAAGGTTCAGGTGGCCATCCACGACACGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGTCCCTTTCCCGTGCTGCCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: QEGSGGHPRHATAGR*SRHSHSPFPVLPGR
Trigger: TCTCCCAGGCAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000569653.1
CDS TCA 90 bp ACAGACGTGCAGGAAAGGAAAGGGCGTGCTGCCACCCGAGGAAGTTaGGACCCCCATGCCATCACTGCCCCACAGCAGCCGCTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TDVQERKGRAATRGS*DPHAITAPQQPLQC
Trigger: GCACTGCAGCGGCTGCTGTGGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp GAGGGCCTGGATGCAATCTGCGAATGTCCTGGTGCGCCCACCACCTaGCTTCTCCAAGGCCGAGAACCGTCTGCGCAGCTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: EGLDAICECPGAPTT*LLQGREPSAQLLLV
Trigger: GACAAGGAGGAGCTGCGCAGACGGTTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATTGCATCCAGGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp GATGCTGCTCCAGGAGGGCCTGGATGCAATCTGCGAATGTCCTGGTaGGCCCACCACCTGCCTTCTCCAAGGCCGAGAACCGTCTGCGCA +
Preference number: 5 (lower is better)
Translates to: DAAPGGPGCNLRMSW*AHHLPSPRPRTVCA
Trigger: TGCGCAGACGGTTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATTGCATCCAGGCCCTCCTGGAGCAGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp TCTCTCTGGATGTCGGCGTCTTCTCTGTCTTTCAGCCGCACGGAGTaGAGGAGCCAAGGCCAGGCAGAGCCCATGGCTACCAGGCGCGCA +
Preference number: 5 (lower is better)
Translates to: SLWMSASSLSFSRTE*RSQGQAEPMATRRA
Trigger: TGCGCGCCTGGTAGCCATGGGCTCTGCCTGGCCTTGGCTCCTGCACTCCGTGCGGCTGAAAGACAGAGAAGACGCCGACATCCAGAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp GGGCACAGAGGCCGAGGACTGAGGTTCGAGAACTGTAAAGTCCAGTaGTCTGACGGGGAGTCCCTGACCAGGGCTGGCCTGGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: GHRGRGLRFENCKVQ*SDGESLTRAGLVPS
Trigger: GGATGGGACCAGGCCAGCCCTGGTCAGGGACTCCCCGTCAGAGCACTGGACTTTACAGTTCTCGAACCTCAGTCCTCGGCCTCTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 90 bp GAGACGCTGCTGGTATCTAAGAGGCTGTCCCTGCTGGCAAGGCTCTaGCAGGCTCTCTCTTCAGCAGCTCCTGGGAAGGAGGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: ETLLVSKRLSLLARL*QALSSAAPGKEGGC
Trigger: GCAGCCGCCCTCCTTCCCAGGAGCTGCTGAAGAGAGAGCCTGCCAGAGCCTTGCCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp TCTGTGAACCCTCTGGGGTCTTCAGAGCCCTCTGGAGGCTGCGCCTaGCCGCTCAGCTGCTCTTGGCCTGGGGAACTGAACTCACCGACA +
Preference number: 5 (lower is better)
Translates to: SVNPLGSSEPSGGCA*PLSCSWPGELNSPT
Trigger: TGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGACCCCAGAGGGTTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS CCA 90 bp GGCCCAGCCGGAGGGTACAGTCCAAGGTGGGCTCATAGAAAGCCATaGGGCTCTCGTCCAGGCTGGAGGGCACTTCCACCTCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: GPAGGYSPRWAHRKP*GSRPGWRALPPLPP
Trigger: TGGTGGAAGAGGTGGAAGTGCCCTCCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGCCCACCTTGGACTGTACCCTCCGGCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 90 bp AGAGCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTTGGCCTaGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RALWRLRLAAQLLLA*GTELTDTLLVFLLL
Trigger: GAGAAGCAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569653.1
CDS CCA 90 bp TCTTCAGAGCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTTaGCCTGGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSEPSGGCAWPLSCS*PGELNSPTPSWSSC
Trigger: GCAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569653.1
CDS CCA 90 bp CATGAGGCAGATGGGGATGTACCAGGAGGGTTCAGGCAAAGGCCCTaGTGGGAGAGGCAGCTGCCTGAGCAGCACGTGTACAGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: HEADGDVPGGFRQRP*WERQLPEQHVYSAG
Trigger: GCCAGCGCTGTACACGTGCTGCTCAGGCAGCTGCCTCTCCCACCAGGGCCTTTGCCTGAACCCTCCTGGTACATCCCCATCTGCCTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp GGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAATATTCAACCTGCTGTaGCCTCTGGCACTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GPVLLGAQRVVDPAPVDQIFNLL*PLALRG
Trigger: GCCCCTCAGTGCCAGAGGCAACAGCAGGTTGAATAT...TTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGTTGGTGTTGAGGACATaGCTGGCAATGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPALVLRT*LAMRHS
Trigger: GCTGTGCCGCATTGCCAGCAATGTCCTCAACACCAA...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVGPSVW*TRRRLT
Trigger: GGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCC...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTCCATGCTCCGGCGCTaGCCCCCTACACCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQESMLRR*PPTPSS
Trigger: GGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGGA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTTCGTTGGGGTTGAGGTaGCGGGTGCTGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVSLGLR*RVLTMP
Trigger: CGGCATCGTCAGCACCCGCAACCTCAACCCCAACGA...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCTGCGCAGCTCCTCCTaGTCAATCCCAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLLRSSS*SIPKQP
Trigger: GGGTTGTTTTGGGATTGACAAGGAGGAGCTGCGCAG...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCTGCGCAGCTCCTCCTaGTCAATCCCAAAACAACCC +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPALRSSS*SIPKQP
Trigger: GGGTTGTTTTGGGATTGACAAGGAGGAGCTGCGCAG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTGGAGCGCTGGCCTCTaGGCAGGGGTCATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQWSAGL*AGVIWV
Trigger: CACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp TCTCATCGCTATGGCTGGGCCTTGGAGGGGGCACACCTGAGCTCTTaGAAGCCAGGACACAGGGCACTTGGGCCCTGCCAATCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SHRYGWALEGAHLSS*KPGHRALGPCQSGV
Trigger: GACCCCAGATTGGCAGGGCCCAAGTGCCCTGTGTCCTGGCTTTCAAGAGCTCAGGTGTGCCCCCTCCAAGGCCCAGCCATAGCGATGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 90 bp TACCAGGGAGCCACTTCCCAGAGCAGGGGGCACCTGAACTGGGCATaGGGCAGATGGGGATGTACCAGGAGGGTTCAGGCAAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: YQGATSQSRGHLNWA*GRWGCTRRVQAKAL
Trigger: CAGGGCCTTTGCCTGAACCCTCCTGGTACATCCCCATCTGCCTCATGCCCAGTTCAGGTGCCCCCTGCTCTGGGAAGTGGCTCCCTGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp GCCTGGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGGTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: AWGTELTDTLLVFLC*SRCSGVFKSWGWRW
Trigger: CCATCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS GCA 90 bp TGCACAGGCCACACCCAGGAAAGGCATGCTCCAGCACCAACTCACTaGTTCCCCGACAGCCACAGGGGTCACCTGCTGGGTGGACACACT +
Preference number: 5 (lower is better)
Translates to: CTGHTQERHAPAPTH*FPDSHRGHLLGGHT
Trigger: AGTGTGTCCACCCAGCAGGTGACCCCTGTGGCTGTCGGGGAAGCAGTGAGTTGGTGCTGGAGCATGCCTTTCCTGGGTGTGGCCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp GAGAAGGCCGCTGCTGATGACAGACGTGCAGGAAAGGAAAGGGCGTaGTGCCACCCGAGGAAGTTGAGACCCCCATGCCATCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: EKAAADDRRAGKERA*CHPRKLRPPCHHCP
Trigger: GGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGTCATCAGCAGCGGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp AGAAGAGCGAGACAGGCCTTGGCTTTCTCAGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGCCCTGGAGACACCAGACACACAGGT +
Preference number: 5 (lower is better)
Translates to: RRARQALAFSASASG*SRGTPGPGDTRHTG
Trigger: ACCTGTGTGTCTGGTGTCTCCAGGGCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp TCTTCAGAGCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTTaGCCTGGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SSEPSGGCAWPLSCS*PGELNSPTPSWSSC
Trigger: ACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGCTCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS CCA 90 bp TGGTGGGAGAGGCAGCTGCCTGAGCAGCACGTGTACAGCGCTGGCTaGAGCCACCACGCTGAATCTCATTTGTGGAGGAGAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WWERQLPEQHVYSAG*SHHAESHLWRRGLQ
Trigger: CTGCAGGCCTCTCCTCCACAAATGAGATTCAGCGTGGTGGCTCCAGCCAGCGCTGTACACGTGCTGCTCAGGCAGCTGCCTCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGCGAAGAGACACCACCTaGGCTAGCCCGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQRRDTT*ASPAFS
Trigger: GCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCG...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTTCCACCCACCCTTGGTaGGGGTGGAGTGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVSTHPW*GWSDEA
Trigger: AGCCTCATCACTCCACCCCAACCAAGGGTGGGTGGA...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGCGCTCCAGGTTGTGCTaGTCCATGGCGCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQRSRLC*SMALSC
Trigger: GCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCG...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQELTRRR*TKLLFW
Trigger: CCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAAGGGCCCGGTTCTTCTaGGGGCCCAGCGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RRRLTKLLFWHSMKAFTRRARFF*GPSVWL
Trigger: CAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCT...TCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCAGGCTGGTCCAACTaGCCGGCAGCCCGCATTCTG +
Preference number: 5 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQSGWSN*PAARIL
Trigger: CAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGA...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTCGTTGGGGTTGAGGTaGCGGGTGCTGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCSLGLR*RVLTMP
Trigger: CGGCATCGTCAGCACCCGCAACCTCAACCCCAACGA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAGAGCGAGACAGGCCTaGGCTTTCTCAGCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPRARQA*AFSASA
Trigger: AGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGATCCACTTGTTCCAGTaGACCTCGTGGGGGAACACA +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPAIHLFQ*TSWGNT
Trigger: TGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGAT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCCTCACCGACACCCTCTaGGTCTTCCTGCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVLTDTL*VFLLLL
Trigger: CAGGAGAAGCAGGAAGACCAAGAGGGTGTCGGTGAG...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569653.1
CDS TCA 90 bp CTTTCCAAACTCCCTGCTTCTCTCCTGTCTGGACAGAGGGGCCCTTaGCCGCCAGCTGGGTGGAACCAGGACGTGGTGTCCGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: LSKLPASLLSGQRGP*PPAGWNQDVVSALM
Trigger: CATCAGAGCGGACACCACGTCCTGGTTCCACCCAGCTGGCGGTCAAGGGCCCCTCTGTCCAGACAGGAGAGAAGCAGGGAGTTTGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp TGGGCCGGAGGTTTGCAGAGGCTCTTGTGTCTTTCTGGGACCCTCTaGCTCTCCGCTTGCTGCTGCTCCTCTCCTCCTCACTGTCCGACT +
Preference number: 5 (lower is better)
Translates to: WAGGLQRLLCLSGTL*LSACCCSSPPHCPT
Trigger: AGTCGGACAGTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAGGCAGAGGGTCCCAGAAAGACACAAGAGCCTCTGCAAACCTCCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp CCACCACCTCACGGCTTCCAGTGGTGTACTCCAGCATGGCGCACTTaGGCTCCAGGTTGTGCTTGTCCATGGCGCTCTCCTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PPPHGFQWCTPAWRT*APGCACPWRSPAPS
Trigger: AGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCGTGAGGTGGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp ACTCTCCGGTTTCGGTCCAGCGAGGGCTCTCGGTCCACCTCAAACTaGTCTTCCCAGCCAGCACAGAGCTCGGAGCCTACTCTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TLRFRSSEGSRSTSN*SSQPAQSSEPTLAS
Trigger: GGAAGCAAGAGTAGGCTCCGAGCTCTGTGCTGGCTGGGAAGAGCAGTTTGAGGTGGACCGAGAGCCCTCGCTGGACCGAAACCGGAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS GCA 90 bp AGGACATTGCTGGCAATGCGGCACAGCACAAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGAAGCCGCGTCATCCGCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RTLLAMRHSTSSPSS*IDQVTRSRVIRCRA
Trigger: TGCCCTGCAGCGGATGACGCGGCTTCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCTTGTGCTGTGCCGCATTGCCAGCAATGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
ENST00000568569.1
CDS GCA 90 bp TTGGCCTGGGGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LAWGTELTDTLLVFL*CSRCSGVFKSWGWR
Trigger: TCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS GCA 90 bp AAGGCCGCTGCTGATGACAGACGTGCAGGAAAGGAAAGGGCGTGCTaGCACCCGAGGAAGTTGAGACCCCCATGCCATCACTGCCCCACA +
Preference number: 5 (lower is better)
Translates to: KAAADDRRAGKERAC*HPRKLRPPCHHCPT
Trigger: TGTGGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGTCATCAGCAGCGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 90 bp GCCAGGCTCACGGTGGTCAAGAGCTCGCTGCGGGCCTTCTCTCTTTaGTACTGCCGGCTTAGGTCGCTCTCCTCTGCAAACACGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ARLTVVKSSLRAFSL*YCRLRSLSSANTQE
Trigger: TTCCTGCGTGTTTGCAGAGGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGACCACCGTGAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp TTCCACCTCTTCCACCACGGGTGTAGAGAAGAGCGAGACAGGCCTTaGCTTTCTCAGCCAGCGCTTCCGGATGCAGCCGAGGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: FHLFHHGCREERDRP*LSQPALPDAAEGLQ
Trigger: CTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCTTCTCTACACCCGTGGTGGAAGAGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 90 bp CCCTTGCTTCCTGTAACTCTGTGGCATGGTTGTCCCGGGGGCAGCTaGGCATTCAGGGCTTATCCCTCTGTGGACCCCTGGCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: PLLPVTLWHGCPGGS*AFRAYPSVDPWLIC
Trigger: GCAGATGAGCCAGGGGTCCACAGAGGGATAAGCCCTGAATGCCCAGCTGCCCCCGGGACAACCATGCCACAGAGTTACAGGAAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGACTCCAGCGCGTCCATaGCTACTTCAGTCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQTPARP*LLQSAA
Trigger: CGCCGCCGACTGAAGTAGCAATGGACGCGCTGGAGT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp ATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTCACGCAGGAAATGTACTaGGTGGTTCGCTGCCGACCT +
Preference number: 5 (lower is better)
Translates to: MRPVPKGKAQKSLGDGQVTQEMY*VVRCRP
Trigger: AGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGT...GACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTACGCAGGAAATGTACTaGGTGGTTCGCTGCCGACCT +
Preference number: 5 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGTQEMY*VVRCRP
Trigger: AGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGT...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGTCCACCCACCCTTGGTaGGGGTGGAGTGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLSTHPW*GWSDEA
Trigger: AGCCTCATCACTCCACCCCAACCAAGGGTGGGTGGA...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGGCTATGTCACCACTGTaGCTGTCCGCACAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GTWALKEPGDPAEMARVWAMSPL*LSAQWE
Trigger: CTCCCACTGTGCGGACAGCAACAGTGGTGACATAGC...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGAACTGCTACTCTCCTTaGGGTTTTCCATCCGGACCT +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPANCYSP*GFPSGP
Trigger: AGGTCCGGATGGAAAACCCAAAGGAGAGTAGCAGTT...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCACTTGCGCTCCAGGTaGTGCTTGTCCATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAHLRSR*CLSMAL
Trigger: GAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTCCAGCATGGCGCACTaGCGCTCCAGGTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQESSMAH*RSRLCL
Trigger: CAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGCGTTGGCACAAACCTTaGGGTCATCATAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: RSALGGSVPARGWDVLPARWHKP*GHHSHL
Trigger: GAGGTGACTATGATGACCCAAAGGTTTGTGCCAACG...CGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCACCACAATGCTGTCGTaGGGGTTGAGGTTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPTTMLS*GLRLRV
Trigger: CACCCGCAACCTCAACCCCAACGACAGCATTGTGGT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGTTCATCTGGCAGGAGTaGACCACAATGCTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: AAPLWVVQSQPGVGMSCLFIWQE*TTMLSL
Trigger: CAACGACAGCATTGTGGTCAACTCCTGCCAGATGAA...CAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCT +
Preference number: 5 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAAAWEM*AAPKLS
Trigger: AGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp CTTGGTTGGGGTGGAGTGATGAGGCTGGGTCTTGGGCCGGAGGTTTaGAGAGGCTCTTGTGTCTTTCTGGGACCCTCTGCCTCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: LGWGGVMRLGLGPEV*RGSCVFLGPSASPL
Trigger: AAGCGGAGAGGCAGAGGGTCCCAGAAAGACACAAGAGCCTCTGCAAACCTCCGGCCCAAGACCCAGCCTCATCACTCCACCCCAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TCCGAAACTCTCTGTGAACCCGACACCCTCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGGTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SETLCEPDTLLVFLC*SRCSGVFKSWGWRW
Trigger: CCATCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTTCACAGAGAGTTTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS GCA 90 bp AGCTCCGAAACTCTCTGTGAACCCGACACCCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSETLCEPDTLLVFL*CSRCSGVFKSWGWR
Trigger: TCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTTCACAGAGAGTTTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS CCA 90 bp TCGGGATCCCCCTCCTGGCCTATCAAGGCCCTGTACCGCATGGCCTaGGAGGCAACGATGATCAGTTTCTTCCCCCACCTGTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SGSPSWPIKALYRMA*EATMISFFPHLSKA
Trigger: AGCCTTTGACAGGTGGGGGAAGAAACTGATCATCGTTGCCTCCCAGGCCATGCGGTACAGGGCCTTGATAGGCCAGGAGGGGGATCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp CTTTCCACCCACCCTTGGTTGGGGTGGAGTGATGAGGCTGGGTCTTaGGCCGGAGGTTTGCAGAGGCTCTTGTGTCTTTCTGGGACCCTC +
Preference number: 5 (lower is better)
Translates to: LSTHPWLGWSDEAGS*AGGLQRLLCLSGTL
Trigger: GAGGGTCCCAGAAAGACACAAGAGCCTCTGCAAACCTCCGGCCCAAGACCCAGCCTCATCACTCCACCCCAACCAAGGGTGGGTGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp CGTTGGGTTCTGAGACGCTGCTGGTATCTAAGAGGCTGTCCCTGCTaGCAAGGCTCTGGCAGGCTCTCTCTTCAGCAGCTCCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RWVLRRCWYLRGCPC*QGSGRLSLQQLLGR
Trigger: CCTTCCCAGGAGCTGCTGAAGAGAGAGCCTGCCAGAGCCTTGCCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp GCTGACGAGAGCCCAGCCAAAGCCGAAGTCCCTGTGGACTGGGATTaGGGGGATGTAGCGCATCCACGAGGCATCGTCGACATACACTGT +
Preference number: 5 (lower is better)
Translates to: ADESPAKAEVPVDWD*GDVAHPRGIVDIHC
Trigger: ACAGTGTATGTCGACGATGCCTCGTGGATGCGCTACATCCCCCCAATCCCAGTCCACAGGGACTTCGGCTTTGGCTGGGCTCTCGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp CTCTTGATCTTCTTCCCAGGGTCCTTCTTCAGCCGCTTCCGCTTCTaGCTTTTCCCACCCCTCACTCTCCGGTTTCGGTCCAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: LLIFFPGSFFSRFRF*LFPPLTLRFRSSEG
Trigger: GCCCTCGCTGGACCGAAACCGGAGAGTGAGGGGTGGGAAAAGCCAGAAGCGGAAGCGGCTGAAGAAGGACCCTGGGAAGAAGATCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 90 bp TCTGTTACTAAACCAGAGACTGAACAGCCACCCGGGGCCCACGAGTaGGGCGGACCCAGAAGAGCTGGACACCAGGCTCTCATCGCTATG +
Preference number: 5 (lower is better)
Translates to: SVTKPETEQPPGAHE*GGPRRAGHQALIAM
Trigger: CATAGCGATGAGAGCCTGGTGTCCAGCTCTTCTGGGTCCGCCCCACTCGTGGGCCCCGGGTGGCTGTTCAGTCTCTGGTTTAGTAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCAAAGGCTTCCACCATaGTACAGCGAGGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVQRLPP*YSEAAR
Trigger: CCTTGCAGCCTCGCTGTACAATGGTGGAAGCCTTTG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCGAAGAGACACCACCTaGGCTAGCCCGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DSSFLACKESPARLRDTDRRDTT*ASPAFS
Trigger: GCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGACTGGAGGCACTGTCTaGGAGATGACCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLTGGTV*EMTSSS
Trigger: GGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGT...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCGACTTCTTGCAGCACTaGGTGGACACGCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCDFLQH*VDTPSC
Trigger: GCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTC...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGACTTCTTGCAGCACTaGGTGGACACGCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLDFLQH*VDTPSC
Trigger: GCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTC...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTCGGACAATGGACTTCTaGCAGCACTTGGTGGACACG +
Preference number: 5 (lower is better)
Translates to: KAEKGAAPLWVVQSQPGVRTMDF*QHLVDT
Trigger: CGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCG...AACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAGTCCCCTGATCCACTaGGGCCCTCTTTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GTWALKEPGDPAEMARVWSPLIH*GPLFLD
Trigger: GTCAAGGAAAAGAGGGCCCAAGTGGATCAGGGGACT...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCCAGGTGACACCATCTaGGCTGCCTTTAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLPGDTI*AAFRWG
Trigger: GCCCCATCTAAAGGCAGCCAAGATGGTGTCACCTGG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCACTTGCGCTCCAGGTaGTGCTTGTCCATGGCGCTC +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCHLRSR*CLSMAL
Trigger: GAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGAGGGGCATTGGGCGCTaGGACAGAAATGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQRGIGR*DRNVWS
Trigger: GCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCT...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTGGTGTTGAGGACATaGCTGGCAATGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: WLTRRRLTKLLFWHSMKALVLRT*LAMRHS
Trigger: GCTGTGCCGCATTGCCAGCAATGTCCTCAACACCAA...GGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp AGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGAATGGGCCCTTCACCTaGGTGTTGAGGACATTGCTG +
Preference number: 5 (lower is better)
Translates to: RLKREPLRSGWFSPSQGLNGPFT*VLRTLL
Trigger: CAGCAATGTCCTCAACACCAAGGTGAAGGGCCCATT...CAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CTGCGAAGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LRRSLAPTRFHGHSASFALTRRR*TKLLFW
Trigger: CCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAA...AGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCTTCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp ATTGAGCTGTCTACCACGATGATCTGCTCCGGGATCCTGACATCCACAGAAATGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: IELSTTMICSGILTSTEMGPSVW*TRRRLT
Trigger: GGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCC...CATTTCTGTGGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp AGGTCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTAGGGCCCGGTTCTTCTaGGGGCCCAGCGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RSLAPTRFHGHSASFAPLRARFF*GPSVWL
Trigger: CAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCT...AAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCATAGCTGGTAGGACATaGGCACGAAGGGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCIAGRT*ARRGGP
Trigger: GGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTAT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTTGGGGGTTTATCAGCTaGGTGAACGTATCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGWGFIS*VNVSGR
Trigger: CCTCCCTGATACGTTCACCAAGCTGATAAACCCCCA...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTGGAGCGCTGGCCTCTaGGCAGGGGTCATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVWSAGL*AGVIWV
Trigger: CACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGGCTGGGGGCCAAATTaGAGTCCTGGAGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVGWGPN*SPGALA
Trigger: GGCCAGCGCTCCAGGACTCAAATTTGGCCCCCAGCC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCT +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQAAWEM*AAPKLS
Trigger: AGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGC...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CAA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCAGAGCGAGACAGGCCTaGGCTTTCTCAGCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLRARQA*AFSASA
Trigger: AGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp GGTAGTGGCGCAGCAGGGAGCTCTCGGGGATGCCAGGCCTGGTCATaGTGTGGTACAGCATGGCCTCCATCATACCCTTGCATACAGGAA +
Preference number: 5 (lower is better)
Translates to: GSGAAGSSRGCQAWS*CGTAWPPSYPCIQE
Trigger: TTCCTGTATGCAAGGGTATGATGGAGGCCATGCTGTACCACATCATGACCAGGCCTGGCATCCCCGAGAGCTCCCTGCTGCGCCACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS TCA 90 bp ATGCCCGGCAGGGTGCTAGGTCCCATTCTGTGTTCAAGTCACCCATaGGAGGAGAGACAGGAGGGCCACTGCAAGGCCAAATGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: MPGRVLGPILCSSHP*EERQEGHCKAKCSQ
Trigger: CTGGCTGCATTTGGCCTTGCAGTGGCCCTCCTGTCTCTCCTCTCATGGGTGACTTGAACACAGAATGGGACCTAGCACCCTGCCGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS GCA 90 bp TGTCCGCACAGTGGGAGACAAAGGACACGTTGGGTTCTGAGACGCTaGTGGTATCTAAGAGGCTGTCCCTGCTGGCAAGGCTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CPHSGRQRTRWVLRR*WYLRGCPCWQGSGR
Trigger: CCTGCCAGAGCCTTGCCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TCAGCAGGTAGTTGGTGTGGGAGGCTTGCGCAGGTTTCACCTCCATaGTCCGGCGCTTGCCCCCTACACCTTCGTCCAAGTCATCCTCTT +
Preference number: 5 (lower is better)
Translates to: SAGSWCGRLAQVSPP*SGACPLHLRPSHPL
Trigger: AAGAGGATGACTTGGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAACTACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000567843.1
CDS GCA 90 bp CCTCCAGGCTGTGGCAAAACTCACGGGAGCGTGACCCTGAAGCTCTaGTCCACGCCATGTGCAGAGTTCCAGGCACACTTTCCTCGAAAC +
Preference number: 5 (lower is better)
Translates to: PPGCGKTHGSVTLKL*STPCAEFQAHFPRN
Trigger: GTTTCGAGGAAAGTGTGCCTGGAACTCTGCACATGGCGTGGAGCAGAGCTTCAGGGTCACGCTCCCGTGAGTTTTGCCACAGCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp TACAGCATGGCCTCCATCATACCCTTGCATACAGGAAGGTTCAGGTaGCCATCCACGACACGCCACGGCCGGCCGATGAAGCAGACACTC +
Preference number: 5 (lower is better)
Translates to: YSMASIIPLHTGRFR*PSTTRHGRPMKQTL
Trigger: GAGTGTCTGCTTCATCGGCCGGCCGTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGCCATGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 90 bp TGGCGCAGCAGGGAGCTCTCGGGGATGCCAGGCCTGGTCATGATGTaGTACAGCATGGCCTCCATCATACCCTTGCATACAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: WRSRELSGMPGLVMM*YSMASIIPLHTGRF
Trigger: GAACCTTCCTGTATGCAAGGGTATGATGGAGGCCATGCTGTACCACATCATGACCAGGCCTGGCATCCCCGAGAGCTCCCTGCTGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCTTCAGGGTGGATCTCTaGCAAGCGAAGAGACACCAC +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPFRVDL*QAKRHH
Trigger: GTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAA...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCAATTCCTTCAGCAGCTaGAGGCACCGAACCATGACG +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPNSFSS*RHRTMT
Trigger: CGTCATGGTTCGGTGCCTCAAGCTGCTGAAGGAATT...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCAATTCCTTCAGCAGCTaGAGGCACCGAACCATGACG +
Preference number: 5 (lower is better)
Translates to: PSQRGTPIPILQGVSHKANSFSS*RHRTMT
Trigger: CGTCATGGTTCGGTGCCTCAAGCTGCTGAAGGAATT...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AGGGAGCCGCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGTCGGCACAGCATTCTaGCTTCTAGTTTTCCCACAT +
Preference number: 5 (lower is better)
Translates to: REPLRSGWFSPSQGLGCPVGTAF*LLVFPH
Trigger: ATGTGGGAAAACTAGAAGCAAGAATGCTGTGCCGAC...AGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGCGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TGCCAGGTGACTCACAAGGCTGAAAAGGGAGCCGCTCCGCTCTGGGTGGTTCAGGAGACAAAGGACACGTaGGGTTCTGAGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CQVTHKAEKGAAPLWVVQETKDT*GSETLL
Trigger: CAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTC...CTGAACCACCCAGAGCGGAGCGGCTCCCTTTTCAGCCTTGTGAGTCACCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCTCCGCTCTGGGTGGTTCAGTCCCAGCCAGGGGTTGGGATGTCCTGCCTGCGGCTTCTTGATGCCATCTaGAATGACAGTGGTCCGATA +
Preference number: 5 (lower is better)
Translates to: APLWVVQSQPGVGMSCLRLLDAI*NDSGPI
Trigger: TATCGGACCACTGTCATTCAAGATGGCATCAAGAAG...CCGCAGGCAGGACATCCCAACCCCTGGCTGGGACTGAACCACCCAGAGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTTGGCTGTGCTTGAATaGGAGATCCGGAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCLAVLE*EIRKRT
Trigger: GGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCAA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGAGTCCCCTGATCCACTaGGGCCCTCTTTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQSPLIH*GPLFLD
Trigger: GTCAAGGAAAAGAGGGCCCAAGTGGATCAGGGGACT...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGATATTCAACCTGCTGTaGCCTCTGGCACTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQEIFNLL*PLALRG
Trigger: GCCCCTCAGTGCCAGAGGCAACAGCAGGTTGAATAT...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGTTGGTGTTGAGGACATaGCTGGCAATGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: GNVSVCDSGQSTRPLLQELVLRT*LAMRHS
Trigger: GCTGTGCCGCATTGCCAGCAATGTCCTCAACACCAA...CTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCCCTTCACCTTGGTGTaGAGGACATTGCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPPFTLV*RTLLAM
Trigger: CATTGCCAGCAATGTCCTCAACACCAAGGTGAAGGG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGTTGACCCGGCGCCGGTaGACCAAGCTCCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVLTRRR*TKLLFW
Trigger: CCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAA...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGAGGGCCCGGTTCTTCTaGGGGCCCAGCGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: APLSRVPVQWETCQSVTLRARFF*GPSVWL
Trigger: CAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCT...CAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp ATCCTGGTCTTTGAAAGAGAAACGATCAGGCTGGTCCAACTTGCCGGCAGCCCGTCAGGCTGGTCCAACTaGCCGGCAGCCCGCATTCTG +
Preference number: 5 (lower is better)
Translates to: ILVFERETIRLVQLAGSPSGWSN*PAARIL
Trigger: CAGAATGCGGGCTGCCGGCAAGTTGGACCAGCCTGA...CGGGCTGCCGGCAAGTTGGACCAGCCTGATCGTTTCTCTTTCAAAGACCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCACCACAATGCTGTCGTaGGGGTTGAGGTTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCTTMLS*GLRLRV
Trigger: CACCCGCAACCTCAACCCCAACGACAGCATTGTGGT...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCGCCTCCATCATACCCTaGCATACAGGAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPASIIP*HTGRFR
Trigger: CCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGC...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCGCAGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCGCCTCCATCATACCCTaGCATACAGGAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSQRGTPIPILQGVSHKAASIIP*HTGRFR
Trigger: CCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGC...GGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp GCAGACGCACTGCAGGTCAAACCAGTAGTTTTCCACATCCTGCATTaGGTTCAGGACATAGAGGCGCCTCTCGAAGGGCCGGCTGCTGCG +
Preference number: 5 (lower is better)
Translates to: ADALQVKPVVFHILH*VQDIEAPLEGPAAA
Trigger: CGCAGCAGCCGGCCCTTCGAGAGGCGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAAACTACTGGTTTGACCTGCAGTGCGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp TTGTGGAGGAGAGGCCTGCAGCGCGGGATAAATCCCAGCTTCCTGTaGGCCAAGACTGGCTTCCAGGTGGGGTTTTGTTTGGCTCATGGG +
Preference number: 5 (lower is better)
Translates to: LWRRGLQRGINPSFL*AKTGFQVGFCLAHG
Trigger: CCCATGAGCCAAACAAAACCCCACCTGGAAGCCAGTCTTGGCTCACAGGAAGCTGGGATTTATCCCGCGCTGCAGGCCTCTCCTCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp CTCACGGTGGTCAAGAGCTCGCTGCGGGCCTTCTCTCTTTGGTACTaGCGGCTTAGGTCGCTCTCCTCTGCAAACACGCAGGAAATGTAC +
Preference number: 5 (lower is better)
Translates to: LTVVKSSLRAFSLWY*RLRSLSSANTQEMY
Trigger: GTACATTTCCTGCGTGTTTGCAGAGGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGACCACCGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp AGAAGCTGCTGCCGAATGGGCCTGGGGAGAAAGCGGATCAGCGTGTaGTTCTTCAGCGGGTCGTTCAGAAATTCCTCCAGGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RSCCRMGLGRKRISV*FFSGSFRNSSRLST
Trigger: GGTGGACAACCTGGAGGAATTTCTGAACGACCCGCTGAAGAAGCACACGCTGATCCGCTTTCTCCCCAGGCCCATTCGGCAGCAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TTCCCGGACCTGCTGATAAGGGAGACAGGGCTGGCCTTTTCTTCTTaGCCTGCGAGGGCCACATGGAACCATCCCAGAAACGGCTTACCT +
Preference number: 5 (lower is better)
Translates to: FPDLLIRETGLAFSS*PARATWNHPRNGLP
Trigger: AGGTAAGCCGTTTCTGGGATGGTTCCATGTGGCCCTCGCAGGGCAAGAAGAAAAGGCCAGCCCTGTCTCCCTTATCAGCAGGTCCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS CCA 90 bp CGGAAGCGGACCTGCTCGATGGCACTTCTCACTAGAGGGTCGTTCTaGTCCATGGACGGGTGCACCACCAGATCCACCTTCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RKRTCSMALLTRGSF*SMDGCTTRSTFFLM
Trigger: CATCAAGAAGAAGGTGGATCTGGTGGTGCACCCGTCCATGGACCAGAACGACCCTCTAGTGAGAAGTGCCATCGAGCAGGTCCGCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGCGAGGCTGCAAGGACTaGGTTCTGATGTCATTGGTA +
Preference number: 5 (lower is better)
Translates to: GTWALKEPGDPAEMARVWRGCKD*VLMSLV
Trigger: TACCAATGACATCAGAACCAAGTCCTTGCAGCCTCG...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTTTCAGGGTGGATCTCTaGCAAGCGAAGAGACACCAC +
Preference number: 5 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAFRVDL*QAKRHH
Trigger: GTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAA...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTGGGCCCTCTTTTCCTaGACTGTCTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCWALFS*TVFFCL
Trigger: GAGGCAGAAGAAGACAGTCAAGGAAAAGAGGGCCCA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGTTGGTGTGGGAGGCTaGCGCAGGTTTCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: GLFISGLQGITSQAEGHGVGVGG*RRFHLH
Trigger: ATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAAC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGATGCTGTCGTTGGGGTaGAGGTTGCGGGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVMLSLG*RLRVLT
Trigger: CGTCAGCACCCGCAACCTCAACCCCAACGACAGCAT...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGTTCATCTGGCAGGAGTaGACCACAATGCTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GTWALKEPGDPAEMARVWFIWQE*TTMLSL
Trigger: CAACGACAGCATTGTGGTCAACTCCTGCCAGATGAA...CCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTGCCGCTCAGCTGCTCTaGGCCTGGGGAACTGAACTC +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTAAQLL*AWGTEL
Trigger: GAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGC...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS-3UTR CAA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCT +
Preference number: 5 (lower is better)
Translates to: LFISGLQGITSQAEGHGQAAWEM*AAPKLS
Trigger: AGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGC...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCAGAGCGAGACAGGCCTaGGCTTTCTCAGCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVRARQA*AFSASA
Trigger: AGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCT...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCGAACCCGACACCCTCTaGGTCTTCCTGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVEPDTL*VFLCCS
Trigger: GGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTTC...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS TCA 90 bp CTTTACAGACAGGGCGTGGCTCCACCTCGGAGTACCCAAGGCTCCTaGCAGGTACTCACCTGTAGTAGGTCTGGGATAGCTGGTAGGACA +
Preference number: 5 (lower is better)
Translates to: LYRQGVAPPRSTQGS*QVLTCSRSGIAGRT
Trigger: TGTCCTACCAGCTATCCCAGACCTACTACAGGTGAGTACCTGTCAGGAGCCTTGGGTACTCCGAGGTGGAGCCACGCCCTGTCTGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS CCA 90 bp TGTCACCACTGTTGCTGTCCGCACAGTGGGAGACAAAGGACACGTTaGGTTCTGAGACGCTGCTGGTATCTAAGAGGCTGTCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CHHCCCPHSGRQRTR*VLRRCWYLRGCPCW
Trigger: CCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp GAGGCGCCTCTCGAAGGGCCGGCTGCTGCGGGCCAGGTTGTAATGTaGGTCGCAGATGGTAGTGTCAACAATGACTGCATTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: EAPLEGPAAAGQVVM*VADGSVNNDCILLQ
Trigger: TTGAAGAAGAATGCAGTCATTGTTGACACTACCATCTGCGACCCACATTACAACCTGGCCCGCAGCAGCCGGCCCTTCGAGAGGCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp TTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTACAGACAGGGCGTaGCTCCACCTCGGAGTACCCAAGGCTCCTGACAGGTACTCACCT +
Preference number: 5 (lower is better)
Translates to: FMATVLPLLLFTDRA*LHLGVPKAPDRYSP
Trigger: AGGTGAGTACCTGTCAGGAGCCTTGGGTACTCCGAGGTGGAGCCACGCCCTGTCTGTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS CCA 90 bp TGGGCGGGGCTGCCGAGCTTAGGATCAGGGCCTTCCCTCTTCCTTTaGTTTCAATGGGAACAGCCATTCCAGGTTGTTCTGCAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: WAGLPSLGSGPSLFL*FQWEQPFQVVLQPK
Trigger: CTTTGGCTGCAGAACAACCTGGAATGGCTGTTCCCATTGAAACCAAAGGAAGAGGGAAGGCCCTGATCCTAAGCTCGGCAGCCCCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567806.1
CDS-3UTR CAA 90 bp CCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGCGAGGCTGCAAGGACTaGGTTCTGATGTCATTGGTA +
Preference number: 5 (lower is better)
Translates to: PTPSVMRPVPKGKAQKSLRGCKD*VLMSLV
Trigger: TACCAATGACATCAGAACCAAGTCCTTGCAGCCTCG...CAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCACTCGGATTTCAGCTaGGGAAATTCCTTTCGTGCC +
Preference number: 5 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEAHSDFS*GNSFRA
Trigger: GGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGTG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGATCTTGGGCCGGAGGTTaGCAGAGGCTCTTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GLFISGLQGITSQAEGHGSWAGG*QRLLCL
Trigger: AAGACACAAGAGCCTCTGCAAACCTCCGGCCCAAGA...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGTCTTGGGCCGGAGGTTaGCAGAGGCTCTTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LFISGLQGITSQAEGHGQSWAGG*QRLLCL
Trigger: AAGACACAAGAGCCTCTGCAAACCTCCGGCCCAAGA...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTGGAATGTGAGGTGTGCACAGGAGACAAAGGACACGTaGGGTTCTGAGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EPGDPAEMARVWNVRCAQETKDT*GSETLL
Trigger: CAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTC...CTGTGCACACCTCACATTCCAGACTCTAGCCATCTCGGCAGGATCTCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTAACTGCTACTCTCCTTaGGGTTTTCCATCCGGACCT +
Preference number: 5 (lower is better)
Translates to: VAPGHSRSQEILPRWLESNCYSP*GFPSGP
Trigger: AGGTCCGGATGGAAAACCCAAAGGAGAGTAGCAGTT...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCGGACAATGGACTTCTaGCAGCACTTGGTGGACACG +
Preference number: 5 (lower is better)
Translates to: DSSFLACKESPARLRDTDRTMDF*QHLVDT
Trigger: CGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCG...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTTGGCTGTGCTTGAATaGGAGATCCGGAAGCGGACC +
Preference number: 5 (lower is better)
Translates to: SSFLACKESPARLRDTDSLAVLE*EIRKRT
Trigger: GGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCAA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACCCTGTTGGCTGTGCTaGAATTGGAGATCCGGAAGC +
Preference number: 5 (lower is better)
Translates to: GLFISGLQGITSQAEGHGPCWLC*NWRSGS
Trigger: GCTTCCGGATCTCCAATTCAAGCACAGCCAACAGGG...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGAGGGGCATTGGGCGCTaGGACAGAAATGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ALHEGLHKNVVLVLPIEARGIGR*DRNVWS
Trigger: GCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCT...CGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCCCCTTCACCTTGGTGTaGAGGACATTGCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCPFTLV*RTLLAM
Trigger: CATTGCCAGCAATGTCCTCAACACCAAGGTGAAGGG...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGGAGGCTCGTTGGCACAAACCTTaGGGTCATCATAGTCACCTC +
Preference number: 5 (lower is better)
Translates to: NVSVCDSGQSTRPLLQEARWHKP*GHHSHL
Trigger: GAGGTGACTATGATGACCCAAAGGTTTGTGCCAACG...AGCCTCCTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGGGGGTTTATCAGCTaGGTGAACGTATCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCWGFIS*VNVSGR
Trigger: CCTCCCTGATACGTTCACCAAGCTGATAAACCCCCA...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAAGAAGCACCAACTCCCAGTGTGATGAGGCCAGTTCCCAAGGGGAAGGCCCAGATCCACTTGTTCCAGTaGACCTCGTGGGGGAACACA +
Preference number: 5 (lower is better)
Translates to: QEAPTPSVMRPVPKGKAQIHLFQ*TSWGNT
Trigger: TGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGAT...CTGGGCCTTCCCCTTGGGAACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TCCCTGGCTCCTACACGCTTTCATGGCCACAGTGCTTCCTTTGCTCCTCTTTACACCCAAGCCGGCATCTaGCACATGAGGCTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: SLAPTRFHGHSASFAPLYTQAGI*HMRLRR
Trigger: CCTTCGCAGCCTCATGTGCAAGATGCCGGCTTGGGT...GTAAAGAGGAGCAAAGGAAGCACTGTGGCCATGAAAGCGTGTAGGAGCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS GCA 90 bp CTCTGGCAGGCTCTCTCTTCAGCAGCTCCTGGGAAGGAGGGCGGCTaGTTTTTCAATGGGTGTAGGTTTACAACTTTCCACCCACCCTTG +
Preference number: 5 (lower is better)
Translates to: LWQALSSAAPGKEGG*FFNGCRFTTFHPPL
Trigger: CAAGGGTGGGTGGAAAGTTGTAAACCTACACCCATTGAAAAAGCAGCCGCCCTCCTTCCCAGGAGCTGCTGAAGAGAGAGCCTGCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TGTTTGGCTCATGGGGAATTTGACACTCAACTTCAAGCTCCTAGCTaGCAGAGGAGCTGGAGGCCCCAGGCACACATGGGAGTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: CLAHGEFDTQLQAPS*QRSWRPQAHMGVSQ
Trigger: TTGGCTGACTCCCATGTGTGCCTGGGGCCTCCAGCTCCTCTGGCAGCTAGGAGCTTGAAGTTGAGTGTCAAATTCCCCATGAGCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp AAGCGAAGAGACACCACCTTGGCTAGCCCGGCGTTCAGCATATACTaGTACAGACGCTTAAACGTCCTTTCGCACAGCCCCAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KRRDTTLASPAFSIY*YRRLNVLSHSPSSS
Trigger: GGAAGAGCTGGGGCTGTGCGAAAGGACGTTTAAGCGTCTGTACCAGTATATGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp ATCGCAAGAGACCTTCCTCAGACAGGTTCCGCACCAAGCGGACAATaGACTTCTTGCAGCACTTGGTGGACACGCCTTCCTGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: IARDLPQTGSAPSGQ*TSCSTWWTRLPASP
Trigger: AGGAGAAGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGCGGAACCTGTCTGAGGAAGGTCTCTTGCGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp TTGCCTCTGGCACTGAGGGGCATTGGGCGCTTGGACAGAAATGTCTaGAGCCTCACTGTGAGTCCATTCTCTGCGGCAGTGTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LPLALRGIGRLDRNV*SLTVSPFSAAVFSF
Trigger: AAAGGAGAACACTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 90 bp AAGGCAGCAGTCAGGTCTTCGGGACTATACCCAGACAGCTCCAGCTaGAGGACAAACTCCTCCAAGCTGCAGGTGTTTTCCTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KAAVRSSGLYPDSSS*RTNSSKLQVFSWGF
Trigger: AAACCCCCAGGAAAACACCTGCAGCTTGGAGGAGTTTGTCCTCCAGCTGGAGCTGTCTGGGTATAGTCCCGAAGACCTGACTGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 90 bp CGGCACTGCCCTCGCCTGCTTGTTGATTTATTCTTCAAGCATTTATaGAATGCCCCCTCTGTACCAGGGAGCCACTTCCCAGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RHCPRLLVDLFFKHL*NAPSVPGSHFPEQG
Trigger: CCCCTGCTCTGGGAAGTGGCTCCCTGGTACAGAGGGGGCATTCCATAAATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCTCAGTAGGAGGAGGATaGAGTGTTGCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVSVGGG*SVAGLQ
Trigger: CTGGAGCCCAGCAACACTCAATCCTCCTCCTACTGA...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGTTGGCTGTGCTaGAATTGGAGATCCGGAAGC +
Preference number: 5 (lower is better)
Translates to: VPVQWETCQSVTLAKAPVPCWLC*NWRSGS
Trigger: GCTTCCGGATCTCCAATTCAAGCACAGCCAACAGGG...GACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCCAGGTGACACCATCTaGGCTGCCTTTAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGPGDTI*AAFRWG
Trigger: GCCCCATCTAAAGGCAGCCAAGATGGTGTCACCTGG...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCCAGCCCCACCTTGTAGCTGACTaGCACAATCTGGATGAAGAT +
Preference number: 5 (lower is better)
Translates to: FLACKESPARLRDTDSQPHLVAD*HNLDED
Trigger: ATCTTCATCCAGATTGTGCAAGTCAGCTACAAGGTG...GGGCTGGCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTTTCCACATCCTGCATaGAGTTCAGGACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQFPHPA*SSGHRG
Trigger: GCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCAGGGGCATTGGGCGCTaGGACAGAAATGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGRGIGR*DRNVWS
Trigger: GCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCT...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AGCGGGGCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCAGGCCACCATGTCGTTaGTGGGCTCGTTATTATCCT +
Preference number: 5 (lower is better)
Translates to: SGAHRSLFCKVYPTRPFLRPPCR*WARYYP
Trigger: AGGATAATAACGAGCCCACAAACGACATGGTGGCCT...GAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGTTGGTGTGGGAGGCTaGCGCAGGTTTCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGVGVGG*RRFHLH
Trigger: ATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAAC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp GCTGCCGTCCTTCCCCAAGCTTTTGATGACCTCATTCTCCACCATTaGGCTGTCTACCACGATGATCTGCTCCGGGATCCTGACATCCAC +
Preference number: 5 (lower is better)
Translates to: AAVLPQAFDDLILHH*AVYHDDLLRDPDIH
Trigger: GTGGATGTCAGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAGGTCATCAAAAGCTTGGGGAAGGACGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000567843.1
CDS TCA 90 bp TTCTCCTGCTCAAGATGTAAAGTGAAGGGCACAGAGGCCGAGGACTaGGGTTCGAGAACTGTAAAGTCCAGTGCTCTGACGGGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: FSCSRCKVKGTEAED*GSRTVKSSALTGSP
Trigger: GGGACTCCCCGTCAGAGCACTGGACTTTACAGTTCTCGAACCTCAGTCCTCGGCCTCTGTGCCCTTCACTTTACATCTTGAGCAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp GGTTTTCCATCCGGACCTCCTCGATCACAGCTATGTCACCACTGTTaGTGTCCGCACAGTGGGAGACAAAGGACACGTTGGGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GFPSGPPRSQLCHHC*CPHSGRQRTRWVLR
Trigger: TCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACATAGCTGTGATCGAGGAGGTCCGGATGGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TTAACCCTGTTGGCTGTGCTTGAATTGGAGATCCGGAAGCGGACCTaGTCGATGGCACTTCTCACTAGAGGGTCGTTCTGGTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: LTLLAVLELEIRKRT*SMALLTRGSFWSMD
Trigger: GTCCATGGACCAGAACGACCCTCTAGTGAGAAGTGCCATCGAGCAGGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCAACAGGGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp GAGGAAGAGAATGTGAGAGACTCGGAAAGTCAGGGAAGCCATCTCTaGCCTCCAACCTTCAGCATGGTACCTAGCATGAGCAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: EEENVRDSESQGSHL*PPTFSMVPSMSRAP
Trigger: AGGTGCCCTGCTCATGCTAGGTACCATGCTGAAGGTTGGAGGGCAGAGATGGCTTCCCTGACTTTCCGAGTCTCTCACATTCTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 90 bp ATGACGTCGGTCCCTTTCTTTGTCTTACAAGGTCCACATTCAGGGTaGATCTCTTGCAAGCGAAGAGACACCACCTTGGCTAGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: MTSVPFFVLQGPHSG*ISCKRRDTTLASPA
Trigger: CGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACCTTGTAAGACAAAGAAAGGGACCGACGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp GTCGTAGGTCTGTGTGAGCATATCCCGCTCGAACACAATGTCCACTaGAGGCACTGTCTTGGAGATGACCTCCTCGTCCTCGTCATCATC +
Preference number: 5 (lower is better)
Translates to: VVGLCEHIPLEHNVH*RHCLGDDLLVLVII
Trigger: GATGATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTCGAGCGGGATATGCTCACACAGACCTACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp ACCTCCTCGATCACAGCTATGTCACCACTGTTGCTGTCCGCACAGTaGGAGACAAAGGACACGTTGGGTTCTGAGACGCTGCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: TSSITAMSPLLLSAQ*ETKDTLGSETLLVS
Trigger: AGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACATAGCTGTGATCGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp GTCAGGCTCCTGATCCGTGACCCTAGGCCTCTGACTACAGCTGACTaGGACACAACAGCTGACTGGATTTCTCTTGGCCACTGTGATTCT +
Preference number: 5 (lower is better)
Translates to: VRLLIRDPRPLTTAD*DTTADWISLGHCDS
Trigger: AGAATCACAGTGGCCAAGAGAAATCCAGTCAGCTGTTGTGTCCCAGTCAGCTGTAGTCAGAGGCCTAGGGTCACGGATCAGGAGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTTCAGTAGGAGGAGGATaGAGTGTTGCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTSVGGG*SVAGLQ
Trigger: CTGGAGCCCAGCAACACTCAATCCTCCTCCTACTGA...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCACTCGGATTTCAGCTaGGGAAATTCCTTTCGTGCC +
Preference number: 5 (lower is better)
Translates to: LFISGLQGITSQAEGHGQHSDFS*GNSFRA
Trigger: GGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGTG...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGCTTCTTGATGCCATCTaGAATGACAGTGGTCCGATA +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQLLDAI*NDSGPI
Trigger: TATCGGACCACTGTCATTCAAGATGGCATCAAGAAG...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCCACCTTGTAGCTGACTaGCACAATCTGGATGAAGAT +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCHLVAD*HNLDED
Trigger: ATCTTCATCCAGATTGTGCAAGTCAGCTACAAGGTG...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTATATTCAACCTGCTGTaGCCTCTGGCACTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTIFNLL*PLALRG
Trigger: GCCCCTCAGTGCCAGAGGCAACAGCAGGTTGAATAT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGAATGGGCCCTTCACCTaGGTGTTGAGGACATTGCTG +
Preference number: 5 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVNGPFT*VLRTLL
Trigger: CAGCAATGTCCTCAACACCAAGGTGAAGGGCCCATT...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GATGAGGCCAGTTCCCAAGGGGAAGGCCCAGAAGAGCCTGGGGGATGGGCAGGTTTATTATCCTGGTCTTaGAAAGAGAAACGATCAGGC +
Preference number: 5 (lower is better)
Translates to: DEASSQGEGPEEPGGWAGLLSWS*KEKRSG
Trigger: GCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAA...ACCTGCCCATCCCCCAGGCTCTTCTGGGCCTTCCCCTTGGGAACTGGCCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp TTTCCCGTGCTGCCTGGGAGATGTTGGCAGCTCCGAAACTCTCTGTaGACCCTGAGGGAAGAGGAAGAGAATGTGAGAGACTCGGAAAGT +
Preference number: 5 (lower is better)
Translates to: FPVLPGRCWQLRNSL*TLREEEENVRDSES
Trigger: ACTTTCCGAGTCTCTCACATTCTCTTCCTCTTCCCTCAGGGTTCACAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 90 bp CAAAACTCACGGGAGCGTGACCCTGAAGCTCTGCTCCACGCCATGTaGAGAGTTCCAGGCACACTTTCCTCGAAACAGACGTTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: QNSRERDPEALLHAM*RVPGTLSSKQTFLL
Trigger: TAACAGAAACGTCTGTTTCGAGGAAAGTGTGCCTGGAACTCTGCACATGGCGTGGAGCAGAGCTTCAGGGTCACGCTCCCGTGAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS-3UTR CAA 90 bp CAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCTCGATTAAGCGAAGATaGGTGACAGCTTCTATGATC +
Preference number: 5 (lower is better)
Translates to: QWETCQSVTLAKAPVPCCSIKRR*VTASMI
Trigger: GATCATAGAAGCTGTCACCAATCTTCGCTTAATCGA...GCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CAA 90 bp GTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCTGCAGTCGATTAAGCGAAGATaGGTGACAGCTTCTATGATC +
Preference number: 5 (lower is better)
Translates to: VGNVSVCDSGQSTRPLLQSIKRR*VTASMI
Trigger: GATCATAGAAGCTGTCACCAATCTTCGCTTAATCGA...CTGCAGCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CAA 90 bp GTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCCAAAGCACCCGTCCCCTGCGAAGTTTTAACCCTGTaGGCTGTGCTTGAATTGGAG +
Preference number: 5 (lower is better)
Translates to: VQWETCQSVTLAKAPVPCEVLTL*AVLELE
Trigger: CTCCAATTCAAGCACAGCCAACAGGGTTAAAACTTC...GCAGGGGACGGGTGCTTTGGCCAGAGTCACAGACTGACACGTTTCCCACTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTGGGCCCTCTTTTCCTaGACTGTCTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGWALFS*TVFFCL
Trigger: GAGGCAGAAGAAGACAGTCAAGGAAAAGAGGGCCCA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp AGGACTTCATCTGACTGTCTGAGAGGGCCAGCGTGCTCTGGATCAGGTTCTGAACCCTTCACCTTGGTGTaGAGGACATTGCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: RTSSDCLRGPACSGSGSEPFTLV*RTLLAM
Trigger: CATTGCCAGCAATGTCCTCAACACCAAGGTGAAGGG...TTCAGAACCTGATCCAGAGCACGCTGGCCCTCTCAGACAGTCAGATGAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS-3UTR CAA 90 bp ATTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCACATAGCTGGTAGGACATaGGCACGAAGGGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: ILSKNWNDSVQMVLGNRHIAGRT*ARRGGP
Trigger: GGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTAT...GTGGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp GCACACCGATCCCTATTCTGCAAGGTGTATCCCACAAGGCCCTTCCTCTTGGTGAGGCCACCATGTCGTTaGTGGGCTCGTTATTATCCT +
Preference number: 5 (lower is better)
Translates to: AHRSLFCKVYPTRPFLLVRPPCR*WARYYP
Trigger: AGGATAATAACGAGCCCACAAACGACATGGTGGCCT...CACCAAGAGGAAGGGCCTTGTGGGATACACCTTGCAGAATAGGGATCGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGCCTCCATCATACCCTaGCATACAGGAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGASIIP*HTGRFR
Trigger: CCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTATCCACTTGTTCCAGTaGACCTCGTGGGGGAACACA +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTIHLFQ*TSWGNT
Trigger: TGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGAT...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569653.1
CDS TCA 90 bp ACTCCTCCAAGCTGCAGGTGTTTTCCTGGGGGTTTATCAGCTTGGTaGACGTATCAGGGAGGCAGGAGGTTCCCATTGTTAGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: TPPSCRCFPGGLSAW*TYQGGRRFPLLALP
Trigger: TGGAAGAGCTAACAATGGGAACCTCCTGCCTCCCTGATACGTTCACCAAGCTGATAAACCCCCAGGAAAACACCTGCAGCTTGGAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 90 bp GTCCCTTTCTTTGTCTTACAAGGTCCACATTCAGGGTGGATCTCTTaGAAGCGAAGAGACACCACCTTGGCTAGCCCGGCGTTCAGCATA +
Preference number: 5 (lower is better)
Translates to: VPFFVLQGPHSGWIS*KRRDTTLASPAFSI
Trigger: TATGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACCTTGTAAGACAAAGAAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp GGAGGCACTGTCTTGGAGATGACCTCCTCGTCCTCGTCATCATCATaGTCATTCCGTTTAAATTCCTTCAGCAGCTTGAGGCACCGAACC +
Preference number: 5 (lower is better)
Translates to: GGTVLEMTSSSSSSS*SFRLNSFSSLRHRT
Trigger: GGTTCGGTGCCTCAAGCTGCTGAAGGAATTTAAACGGAATGACCATGATGATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GTGGCACCTGGGCACTCAAGGAGCCAGGAGATCCTGCCGAGATGGCTAGAGTCTAATTCTTTAAACTCGTaGGCACAAACCTTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: VAPGHSRSQEILPRWLESNSLNS*AQTFGS
Trigger: TGACCCAAAGGTTTGTGCCAACGAGTTTAAAGAATT...AGACTCTAGCCATCTCGGCAGGATCTCCTGGCTCCTTGAGTGCCCAGGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTTCCTTCCCCAAGCTTTaGATGACCTCATTCTCCACC +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTSFPKL*MTSFST
Trigger: GGTGGAGAATGAGGTCATCAAAAGCTTGGGGAAGGA...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCTCCTTCCCCAAGCTTTaGATGACCTCATTCTCCACC +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGSFPKL*MTSFST
Trigger: GGTGGAGAATGAGGTCATCAAAAGCTTGGGGAAGGA...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp ACACCAGACACACAGGTTACAGCGGCACTGCCCTCGCCTGCTTGTTaGTTTATTCTTCAAGCATTTATGGAATGCCCCCTCTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: TPDTQVTAALPSPAC*FILQAFMECPLCTR
Trigger: CCTGGTACAGAGGGGGCATTCCATAAATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCGCTGTAACCTGTGTGTCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 90 bp GACTCCAGGCCCTGGAGACACCAGACACACAGGTTACAGCGGCACTaGCCTCGCCTGCTTGTTGATTTATTCTTCAAGCATTTATGGAAT +
Preference number: 5 (lower is better)
Translates to: DSRPWRHQTHRLQRH*PRLLVDLFFKHLWN
Trigger: ATTCCATAAATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCGCTGTAACCTGTGTGTCTGGTGTCTCCAGGGCCTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 90 bp GACCCTAGGCCTCTGACTACAGCTGACTGGGACACAACAGCTGACTaGATTTCTCTTGGCCACTGTGATTCTCCTGCTCAAGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: DPRPLTTADWDTTAD*ISLGHCDSPAQDVK
Trigger: CTTTACATCTTGAGCAGGAGAATCACAGTGGCCAAGAGAAATCCAGTCAGCTGTTGTGTCCCAGTCAGCTGTAGTCAGAGGCCTAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 90 bp CCACATGGAACCATCCCAGAAACGGCTTACCTGGCGAACAGCTCCTaGAGTGTGTCTGGGATTTCAAGGTTAGAATTCCTTAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PHGTIPETAYLANSS*SVSGISRLEFLRAE
Trigger: TTCAGCCCTAAGGAATTCTAACCTTGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAGGTAAGCCGTTTCTGGGATGGTTCCATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS-3UTR CAA 90 bp CCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTCTGGCGTCGGCACAGCATTCTaGCTTCTAGTTTTCCCACAT +
Preference number: 5 (lower is better)
Translates to: PSFQSSSTVGNVSVCDSGVGTAF*LLVFPH
Trigger: ATGTGGGAAAACTAGAAGCAAGAATGCTGTGCCGAC...GCCAGAGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGAGACAACTTTGAATCTTaGAAGAAGTCGGCACAGCAT +
Preference number: 5 (lower is better)
Translates to: GLFISGLQGITSQAEGHGDNFES*KKSAQH
Trigger: ATGCTGTGCCGACTTCTTCAAAGATTCAAAGTTGTC...TCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GACTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACGACAACTTTGAATCTTaGAAGAAGTCGGCACAGCAT +
Preference number: 5 (lower is better)
Translates to: DSSFLACKESPARLRDTDDNFES*KKSAQH
Trigger: ATGCTGTGCCGACTTCTTCAAAGATTCAAAGTTGTC...GTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTCGATTAAGCGAAGATaGGTGACAGCTTCTATGATC +
Preference number: 5 (lower is better)
Translates to: SSFLACKESPARLRDTDSSIKRR*VTASMI
Trigger: GATCATAGAAGCTGTCACCAATCTTCGCTTAATCGA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp GGAGCCCCTCTTTCCAGAGTTCCAGTACAGTGGGAAACGTGTCAGTCTGTGACTTTTCCACATCCTGCATaGAGTTCAGGACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: GAPLSRVPVQWETCQSVTFPHPA*SSGHRG
Trigger: GCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAA...AGTCACAGACTGACACGTTTCCCACTGTACTGGAACTCTGGAAAGAGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp CCTGCCACACACACTTTGGGTCATCATAGTCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTTTATCCTGGTACACCTCGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PATHTLGHHSHLFDS*NLQQVLYPGTPRPG
Trigger: GCCTGGCCGAGGTGTACCAGGATAAAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTGACTATGATGACCCAAAGTGTGTGTGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568569.1
CDS GCA 90 bp CCCTCTTCCTTTGGTTTCAATGGGAACAGCCATTCCAGGTTGTTCTaGAGCCAAAGCAGGGAGTCCCCTAGGGGAATCACTGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: PSSFGFNGNSHSRLF*SQSRESPRGITDSL
Trigger: TAAAGAATCAGTGATTCCCCTAGGGGACTCCCTGCTTTGGCTGCAGAACAACCTGGAATGGCTGTTCCCATTGAAACCAAAGGAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567806.1
CDS-3UTR CAA 90 bp CTCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGAATTCTTTAAACTCGTaGGCACAAACCTTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LFISGLQGITSQAEGHGQNSLNS*AQTFGS
Trigger: TGACCCAAAGGTTTGTGCCAACGAGTTTAAAGAATT...CTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS-3UTR CAA 90 bp TCTTCATTTCTGGCCTGCAAGGAATCACCAGCCAGGCTGAGGGACACGGACAGCTTATTATCCTGGTCTTaGAAAGAGAAACGATCAGGC +
Preference number: 5 (lower is better)
Translates to: SSFLACKESPARLRDTDSLLSWS*KEKRSG
Trigger: GCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAA...GCTGTCCGTGTCCCTCAGCCTGGCTGGTGATTCCTTGCAGGCCAGAAATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 90 bp CGTTGGCACAAACCTTTGGGTCATCATAGTCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTTTATCCTGGTACACCTCGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RWHKPLGHHSHLFDS*NLQQVLYPGTPRPG
Trigger: GCCTGGCCGAGGTGTACCAGGATAAAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTGACTATGATGACCCAAAGGTTTGTGCCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000566779.1
CDS TCA 90 bp GTCCCAAACTGTCTCTCACAGGGGTTTGTCCAGGACCATATGGGCTaGCTTATAGTTGAGATAGGCCTGTGGGTTTTTGACTATGTAGCG +
Preference number: 5 (lower is better)
Translates to: VPNCLSQGFVQDHMG*LIVEIGLWVFDYVA
Trigger: CGCTACATAGTCAAAAACCCACAGGCCTATCTCAACTATAAGTCAGCCCATATGGTCCTGGACAAACCCCTGTGAGAGACAGTTTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 90 bp ACAACTGCAGCTTTTACGAATGAAGGATTTGGGGTCAGCCAAGCCTaGCCTCAGTCAGGTCTGTTCACACTTTACACCTTGGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: TTAAFTNEGFGVSQA*PQSGLFTLYTLASL
Trigger: CAGAGAAGCCAAGGTGTAAAGTGTGAACAGACCTGACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGCTGCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS GCA 90 bp TTCTTCCCCCACCTGTCAAAGGCTTCCACCATTGTACAGCGAGGCTaGAAGGACTTGGTTCTGATGTCATTGGTAATGTTTTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: FFPHLSKASTIVQRG*KDLVLMSLVMFFLS
Trigger: GGAGAGGAAAAACATTACCAATGACATCAGAACCAAGTCCTTGCAGCCTCGCTGTACAATGGTGGAAGCCTTTGACAGGTGGGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 90 bp TCGCTCTCCTCTGCAAACACGCAGGAAATGTACTTGGTGGTTCGCTaGCGACCTTCGTCTTCCATGAATCCCTTGACAACTTTGAATCTT +
Preference number: 5 (lower is better)
Translates to: SLSSANTQEMYLVVR*RPSSSMNPLTTLNL
Trigger: AAGATTCAAAGTTGTCAAGGGATTCATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGTGTTTGCAGAGGAGAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 90 bp CAGGCCCCTTCTACACACCCTACTTTTGCCTACACTAGCCAGGGCTaGCTACTGTTGCTTCCTATAGAATATGTCTCTGCTAAAGCCATA +
Preference number: 5 (lower is better)
Translates to: QAPSTHPTFAYTSQG*LLLLPIEYVSAKAI
Trigger: TATGGCTTTAGCAGAGACATATTCTATAGGAAGCAACAGTAGCCAGCCCTGGCTAGTGTAGGCAAAAGTAGGGTGTGTAGAAGGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 90 bp GATGCCCATGTTCAGAACCTTCAGAGAGCTCCATTCTCATGTTTCTaGCCTTGGCCGACCTTGAAGCATGAGTTACTTATATGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: DAHVQNLQRAPFSCF*PWPTLKHELLICLL
Trigger: CAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGTTCTGAACATGGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS-3UTR CAA 90 bp GCGAGCTCTTCGTCCAACGGAATGAGATGTTTTATCCAAAGACTCTTCAAACGTAATGGGCCCTTCACCTaGGTGTTGAGGACATTGCTG +
Preference number: 5 (lower is better)
Translates to: ASSSSNGMRCFIQRLFKRNGPFT*VLRTLL
Trigger: CAGCAATGTCCTCAACACCAAGGTGAAGGGCCCATT...ACGTTTGAAGAGTCTTTGGATAAAACATCTCATTCCGTTGGACGAAGAGCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564664.5
CDS TCA 90 bp CATGAGTTACTTATATGCCTGTTGCACAACTGCAGCTTTTACGAATaGAGGATTTGGGGTCAGCCAAGCCTGACCTCAGTCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: HELLICLLHNCSFYE*RIWGQPSLTSVRSV
Trigger: AACAGACCTGACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGCTGCAGTTGTGCAACAGGCATATAAGTAACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 90 bp GAGAGCTCCATTCTCATGTTTCTGGCCTTGGCCGACCTTGAAGCATaGGTTACTTATATGCCTGTTGCACAACTGCAGCTTTTACGAATG +
Preference number: 5 (lower is better)
Translates to: ESSILMFLALADLEA*VTYMPVAQLQLLRM
Trigger: CATTCGTAAAAGCTGCAGTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 90 bp ACCTTCAGAGAGCTCCATTCTCATGTTTCTGGCCTTGGCCGACCTTaGAGCATGAGTTACTTATATGCCTGTTGCACAACTGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TFRELHSHVSGLGRP*SMSYLYACCTTAAF
Trigger: AAAAGCTGCAGTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CCA 90 bp CATGTTCAGAACCTTCAGAGAGCTCCATTCTCATGTTTCTGGCCTTaGCCGACCTTGAAGCATGAGTTACTTATATGCCTGTTGCACAAC +
Preference number: 5 (lower is better)
Translates to: HVQNLQRAPFSCFWP*PTLKHELLICLLHN
Trigger: GTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGTTCTGAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS-3UTR CAA 90 bp CACCATGTCGTTTGTGGGCTCGTTATTATCCTGGTCTTTGAAAGAGAAACGATCAGGCCACCATGTCGTTaGTGGGCTCGTTATTATCCT +
Preference number: 5 (lower is better)
Translates to: HHVVCGLVIILVFERETIRPPCR*WARYYP
Trigger: AGGATAATAACGAGCCCACAAACGACATGGTGGCCT...GATCGTTTCTCTTTCAAAGACCAGGATAATAACGAGCCCACAAACGACATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS-3UTR CAA 90 bp GCATTCTGTCCAAAAACTGGAATGACTCCGTGCAGATGGTGCTTGGAAATCGCCTTATTATCCTGGTCTTaGAAAGAGAAACGATCAGGC +
Preference number: 5 (lower is better)
Translates to: AFCPKTGMTPCRWCLEIALLSWS*KEKRSG
Trigger: GCCTGATCGTTTCTCTTTCAAAGACCAGGATAATAA...GGCGATTTCCAAGCACCATCTGCACGGAGTCATTCCAGTTTTTGGACAGAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS GCA 90 bp TATGTCTCTGCTAAAGCCATAATTGATAGGTTATCACTACATTTTTaGCCAGTCCAAACTCCAAAGTATAGAATTCTAACTGTGGTTATG +
Preference number: 5 (lower is better)
Translates to: YVSAKAIIDRLSLHF*PVQTPKYRILTVVM
Trigger: CATAACCACAGTTAGAATTCTATACTTTGGAGTTTGGACTGGGCAAAAATGTAGTGATAACCTATCAATTATGGCTTTAGCAGAGACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp CCCGGGTGCGTGGCGAGGGCCCGCCAGAGAAACTCCTaGGTGCAGGGTTCCAAAGGCAGCGGGAAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PGCVARARQRNS*VQGSKGSGKGG
Trigger: GCCGCCCTTCCCGCTGCCTTTGGAACCCTGCACGCAGGAGTTTCTCTGGCGGGCCCTCGCCACGCACCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GGGCGGCACTCGCGTCTCCAGCCGGCTCCACAGCGCTaGCAGACACAGGCCATCGAGCCCCTCCAGAGCGAC +
Preference number: 6 (lower is better)
Translates to: GRHSRLQPAPQR*QTQAIEPLQSD
Trigger: GTCGCTCTGGAGGGGCTCGATGGCCTGTGTCTGCCAGCGCTGTGGAGCCGGCTGGAGACGCGAGTGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp GGCAGGGCCGGGCAGACTGCCGCACACAGCGCCACATaGAAGCAGCGTCCCAGGCCCGGACAAGCCCCACAT +
Preference number: 6 (lower is better)
Translates to: GRAGQTAAHSAT*KQRPRPGQAPH
Trigger: ATGTGGGGCTTGTCCGGGCCTGGGACGCTGCTTGCATGTGGCGCTGTGTGCGGCAGTCTGCCCGGCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp GCCGACCTGGGCACTGCCAGTGCTCAGCACGCCTGCTaGTCGCCCACTGCGCCCCTCCAAGTACCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: ADLGTASAQHAC*SPTAPLQVPLP
Trigger: TGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp CAGGCCGACCTGGGCACTGCCAGTGCTCAGCACGCCTaGTGCTCGCCCACTGCGCCCCTCCAAGTACCCCTG +
Preference number: 6 (lower is better)
Translates to: QADLGTASAQHA*CSPTAPLQVPL
Trigger: CAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp GCAGCCCTCATTCCAGGCCGACCTGGGCACTGCCAGTaGTCAGCACGCCTGCTGCTCGCCCACTGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: AALIPGRPGHCQ*SARLLLAHCAP
Trigger: AGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp GTGAGGTGGGGTGGGGGACAAGGCGCGCGGTACCTCTaGGGTCTTCAGAGCCCTCTGGAGGCTGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: VRWGGGQGARYL*GLQSPLEAAPG
Trigger: GCCAGGCGCAGCCTCCAGAGGGCTCTGAAGACCCCAGAGGTACCGCGCGCCTTGTCCCCCACCCCACCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp GGTGCGTGGCGAGGGCCCGCCAGAGAAACTCCTGCGTaGAGGGTTCCAAAGGCAGCGGGAAGGGCGGCACTC +
Preference number: 6 (lower is better)
Translates to: GAWRGPARETPA*RVPKAAGRAAL
Trigger: GAGTGCCGCCCTTCCCGCTGCCTTTGGAACCCTGCACGCAGGAGTTTCTCTGGCGGGCCCTCGCCACGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CCTGGAGCGCTGGCCTCTTGGCAGGGGTCATCTGGGTaGCCTCGGCGTCGGTCTCCCCATTCTCACTGGCCC +
Preference number: 6 (lower is better)
Translates to: PGALASWQGSSG*PRRRSPHSHWP
Trigger: GGGCCAGTGAGAATGGGGAGACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 72 bp GGAAGCGCAGCCCTCATTCCAGGCCGACCTGGGCACTaGCAGTGCTCAGCACGCCTGCTGCTCGCCCACTGC +
Preference number: 6 (lower is better)
Translates to: GSAALIPGRPGH*QCSARLLLAHC
Trigger: GCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp GTAGGTCGGGTCGCTCCCGAGGCTCCTCATAGAAGCTaGTGCCCGGGTGCGTGGCGAGGGCCCGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: VGRVAPEAPHRS*CPGAWRGPARE
Trigger: TTCTCTGGCGGGCCCTCGCCACGCACCCGGGCATCAGCTTCTATGAGGAGCCTCGGGAGCGACCCGACCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp TGCCAGTGGCAGGTCCCCCATCCTCGGAGGAAGGTGTaGGGCCCATCAGGGCGGAGGGGAGGGAAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: CQWQVPHPRRKV*GPSGRRGGKAR
Trigger: CCTGGCTTTCCCTCCCCTCCGCCCTGATGGGCCTCACACCTTCCTCCGAGGATGGGGGACCTGCCACTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CAA 72 bp GGGAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: GRARFFLGPSVW*TRRRLTKLLFW
Trigger: CCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569394.5
ENST00000571886.1
CDS CAA 90 bp GGCACGAAGGGGAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTaGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATG +
Preference number: 6 (lower is better)
Translates to: GTKGRARFFLGPSVW*TRRRLTKLLFWHSM
Trigger: CATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569394.5
ENST00000571886.1
CDS GCA 72 bp GCCAGGCAGAGCCCATGGCTACCAGGCGCGCAGTGTTaGCACCGACCTCCAGCACCTGATGCTGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: ARQSPWLPGAQC*HRPPAPDAAPG
Trigger: TCCTGGAGCAGCATCAGGTGCTGGAGGTCGGTGGCAACACTGCGCGCCTGGTAGCCATGGGCTCTGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 72 bp AAGGGGAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTaGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: KGRARFFLGPSV*LTRRRLTKLLF
Trigger: GAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569394.5
ENST00000571886.1
CDS CCA 72 bp GAGTCCTGGAGCGCTGGCCTCTTGGCAGGGGTCATCTaGGTGCCCTCGGCGTCGGTCTCCCCATTCTCACTG +
Preference number: 6 (lower is better)
Translates to: ESWSAGLLAGVI*VPSASVSPFSL
Trigger: CAGTGAGAATGGGGAGACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 72 bp CCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTTaGCCTGGGGAACTGAACTCACCGACACCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: PSGGCAWPLSCS*PGELNSPTPSW
Trigger: CCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000562609.2
ENST00000569653.1
CDS CCA 72 bp GCATTCTGGAAGCGCAGCCCTCATTCCAGGCCGACCTaGGCACTGCCAGTGCTCAGCACGCCTGCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: AFWKRSPHSRPT*ALPVLSTPAAR
Trigger: GCGAGCAGCAGGCGTGCTGAGCACTGGCAGTGCCCAGGTCGGCCTGGAATGAGGGCTGCGCTTCCAGAATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp CTGGGGGCCAAATTTGAGTCCTGGAGCGCTGGCCTCTaGGCAGGGGTCATCTGGGTGCCCTCGGCGTCGGTC +
Preference number: 6 (lower is better)
Translates to: LGAKFESWSAGL*AGVIWVPSASV
Trigger: GACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 72 bp GCCCTCTGGAGGCTGCGCCTGGCCGCTCAGCTGCTCTaGGCCTGGGGAACTGAACTCACCGACACCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ALWRLRLAAQLL*AWGTELTDTLL
Trigger: CAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGCGGCCAGGCGCAGCCTCCAGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000562609.2
ENST00000569653.1
CDS TCA 72 bp TCAGGTGGCCATCCACGACACGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGTCCCTGCAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SGGHPRHATAGR*SRHSHSPCRER
Trigger: CCTCTCCCTGCAGGGACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGCGTGTCGTGGATGGCCACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp GTTCAGGCAAAGGCCCTGGTGGGAGAGGCAGCTGCCTaGGCAGCACGTGTACAGCGCTGGCTGGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: VQAKALVGEAAA*AARVQRWLEPP
Trigger: TGGTGGCTCCAGCCAGCGCTGTACACGTGCTGCTCAGGCAGCTGCCTCTCCCACCAGGGCCTTTGCCTGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp GCTTGTCCATGGCGCTCTCCTGCTCCTTCTGCAGGCTaGCCTCCTCGTCGCTGCCCTGGTCTGTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: ACPWRSPAPSAG*PPRRCPGLCCC
Trigger: ACAGCAGCACAGACCAGGGCAGCGACGAGGAGGGCAGCCTGCAGAAGGAGCAGGAGAGCGCCATGGACAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CACTGCCAGTGCTCAGCACGCCTGCTGCTCGCCCACTaGGCCCCTCCAAGTACCCCTGCCAAGAACCAAGGT +
Preference number: 6 (lower is better)
Translates to: HCQCSARLLLAH*APPSTPAKNQG
Trigger: ACCTTGGTTCTTGGCAGGGGTACTTGGAGGGGCGCAGTGGGCGAGCAGCAGGCGTGCTGAGCACTGGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp GAGAAGTCGGGCAGCTTCAGGTCGGGATCCCCCTCCTaGCCTATCAAGGCCCTGTACCGCATGGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: EKSGSFRSGSPS*PIKALYRMAWE
Trigger: CTCCCAGGCCATGCGGTACAGGGCCTTGATAGGCCAGGAGGGGGATCCCGACCTGAAGCTGCCCGACTTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GGCCTGAGCCGGGCGGGCACAGGGGTGCAGCGGAGCTaGAACTTCATCTGGCAGGAGTTGACCACAATGCTG +
Preference number: 6 (lower is better)
Translates to: GLSRAGTGVQRS*NFIWQELTTML
Trigger: CAGCATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGCCCGGCTCAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp TGGGGGCCAAATTTGAGTCCTGGAGCGCTGGCCTCTTaGCAGGGGTCATCTGGGTGCCCTCGGCGTCGGTCT +
Preference number: 6 (lower is better)
Translates to: WGPNLSPGALAS*QGSSGCPRRRS
Trigger: AGACCGACGCCGAGGGCACCCAGATGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGCCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 72 bp CCGGGGGCAGCTGGGCATTCAGGGCTTATCCCTCTGTaGACCCCTGGCTCATCTGCAGGAGTGGGTGAGGTG +
Preference number: 6 (lower is better)
Translates to: PGAAGHSGLIPL*TPGSSAGVGEV
Trigger: CACCTCACCCACTCCTGCAGATGAGCCAGGGGTCCACAGAGGGATAAGCCCTGAATGCCCAGCTGCCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp AAACCAGAGACTGAACAGCCACCCGGGGCCCACGAGTaGGGCGGACCCAGAAGAGCTGGACACCAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: KPETEQPPGAHE*GGPRRAGHQAL
Trigger: GAGAGCCTGGTGTCCAGCTCTTCTGGGTCCGCCCCACTCGTGGGCCCCGGGTGGCTGTTCAGTCTCTGGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp TCAGGTGGCCATCCACGACACGCCACGGCCGGCCGATaGAGCAGACACTCTCACAGTCCCTTTCCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: SGGHPRHATAGR*SRHSHSPFPVL
Trigger: CAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTTCATCGGCCGGCCGTGGCGTGTCGTGGATGGCCACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000569653.1
CDS TCA 72 bp CACAGGGGTCCTAGAGGTGGATCCACTTGTTCCAGTTaGCCTCGTGGGGGAACACACGGCCCAGCCGGAGGG +
Preference number: 6 (lower is better)
Translates to: HRGPRGGSTCSS*PRGGTHGPAGG
Trigger: CCCTCCGGCTGGGCCGTGTGTTCCCCCACGAGGTCAACTGGAACAAGTGGATCCACCTCTAGGACCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS TCA 72 bp CAGGAAAGGAAAGGGCGTGCTGCCACCCGAGGAAGTTaGGACCCCCATGCCATCACTGCCCCACAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: QERKGRAATRGS*DPHAITAPQQP
Trigger: CGGCTGCTGTGGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS TCA 72 bp GCAGCACGTGTACAGCGCTGGCTGGAGCCACCACGCTaGATCTCATTTGTGGAGGAGAGGCCTGCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: AARVQRWLEPPR*ISFVEERPAAR
Trigger: CCGCGCTGCAGGCCTCTCCTCCACAAATGAGATTCAGCGTGGTGGCTCCAGCCAGCGCTGTACACGTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp CCCCTTGCCACCTGGACCGGCCTAGCCGTTCCAGGATaGAGTAGGAGAAGTCGGGCAGCTTCAGGTCGGGAT +
Preference number: 6 (lower is better)
Translates to: PLATWTGLAVPG*SRRSRAASGRD
Trigger: ATCCCGACCTGAAGCTGCCCGACTTCTCCTACTGCATCCTGGAACGGCTAGGCCGGTCCAGGTGGCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CCAGGAGGGCCTGGATGCAATCTGCGAATGTCCTGGTaGGCCCACCACCTGCCTTCTCCAAGGCCGAGAACC +
Preference number: 6 (lower is better)
Translates to: PGGPGCNLRMSW*AHHLPSPRPRT
Trigger: GGTTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATTGCATCCAGGCCCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 72 bp AGACAGGCCTTGGCTTTCTCAGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGCCCTGGAGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: RQALAFSASASG*SRGTPGPGATP
Trigger: TGGAGTTGCTCCAGGGCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGCTGAGAAAGCCAAGGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000569653.1
CDS GCA 72 bp CCCGACACCCTCTTGGTCTTCCTGTGCTGCTCCCGCTaGAGCGGTGTCTTCAAGAGCTGGGGGTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: PDTLLVFLCCSR*SGVFKSWGWRW
Trigger: CCATCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS GCA 72 bp AGACAGGCCTTGGCTTTCTCAGCCAGCGCTTCCGGATaGAGCCGAGGGACTCCAGGCCCTGGAGACACCAGA +
Preference number: 6 (lower is better)
Translates to: RQALAFSASASG*SRGTPGPGDTR
Trigger: TCTGGTGTCTCCAGGGCCTGGAGTCCCTCGGCTGCATCCGGAAGCGCTGGCTGAGAAAGCCAAGGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp GCTCCAGGAGGGCCTGGATGCAATCTGCGAATGTCCTaGTGCGCCCACCACCTGCCTTCTCCAAGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: APGGPGCNLRMS*CAHHLPSPRPR
Trigger: TCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATTGCATCCAGGCCCTCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 72 bp GGAACACACGGCCCAGCCGGAGGGTACAGTCCAAGGTaGGCTCATAGAAAGCCATGGGGCTCTCGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GTHGPAGGYSPR*AHRKPWGSRPG
Trigger: GCCTGGACGAGAGCCCCATGGCTTTCTATGAGCCCACCTTGGACTGTACCCTCCGGCTGGGCCGTGTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 72 bp AAAGCCAGGACACAGGGCACTTGGGCCCTGCCAATCTaGGGTCAGCACACACACTCATGGGAGGCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: KARTQGTWALPI*GQHTHSWEAPP
Trigger: TGGGGGCGCCTCCCATGAGTGTGTGTGCTGACCCCAGATTGGCAGGGCCCAAGTGCCCTGTGTCCTGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp CATCTTCAGCTCCGGGCCCAAGGCTGGGGGCCAAATTaGAGTCCTGGAGCGCTGGCCTCTTGGCAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: HLQLRAQGWGPN*SPGALASWQGS
Trigger: TGACCCCTGCCAAGAGGCCAGCGCTCCAGGACTCAAATTTGGCCCCCAGCCTTGGGCCCGGAGCTGAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 90 bp CGGCTTCCAGTGGTGTACTCCAGCATGGCGCACTTGCGCTCCAGGTaGTGCTTGTCCATGGCGCTCTCCTGCTCCTTCTGCAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RLPVVYSSMAHLRSR*CLSMALSCSFCRLP
Trigger: GGGCAGCCTGCAGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp GACAGACGTGCAGGAAAGGAAAGGGCGTGCTGCCACCCGAGGAAGTaGAGACCCCCATGCCATCACTGCCCCACAGCAGCCGCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: DRRAGKERACCHPRK*RPPCHHCPTAAAAV
Trigger: CACTGCAGCGGCTGCTGTGGGGCAGTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CAA 90 bp GCGGGCACAGGGGTGCAGCGGAGCTGGAACTTCATCTGGCAGGAGTaGACCACAATGCTGTCGTTGGGGTTGAGGTTGCGGGTGCTGACG +
Preference number: 6 (lower is better)
Translates to: AGTGVQRSWNFIWQE*TTMLSLGLRLRVLT
Trigger: CGTCAGCACCCGCAACCTCAACCCCAACGACAGCATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp CTCTCATCGCTATGGCTGGGCCTTGGAGGGGGCACACCTGAGCTCTaGAAAGCCAGGACACAGGGCACTTGGGCCCTGCCAATCTGGGGT +
Preference number: 6 (lower is better)
Translates to: LSSLWLGLGGGTPEL*KARTQGTWALPIWG
Trigger: ACCCCAGATTGGCAGGGCCCAAGTGCCCTGTGTCCTGGCTTTCAAGAGCTCAGGTGTGCCCCCTCCAAGGCCCAGCCATAGCGATGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp GGCCCACCCACATTGGCAGGAGAGGGACAAGGGTTGTaGCTCCTGGACTTGCCAGCTCTACTGGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: GPPTLAGEGQGL*LLDLPALLAAQ
Trigger: CTGGGCTGCCAGTAGAGCTGGCAAGTCCAGGAGTCACAACCCTTGTCCCTCTCCTGCCAATGTGGGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp GGGCAGCTGCTTGACCCGTGGGGCCCGGCGGACTCATaGGTTAGTGACCCCTGGCACAGAGAAAGCATCAGA +
Preference number: 6 (lower is better)
Translates to: GQLLDPWGPADS*VSDPWHRESIR
Trigger: TCTGATGCTTTCTCTGTGCCAGGGGTCACTAACTCATGAGTCCGCCGGGCCCCACGGGTCAAGCAGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp AGTTCAGGACATAGAGGCGCCTCTCGAAGGGCCGGCTaGTGCGGGCCAGGTTGTAATGTGGGTCGCAGATGG +
Preference number: 6 (lower is better)
Translates to: SSGHRGASRRAG*CGPGCNVGRRW
Trigger: CCATCTGCGACCCACATTACAACCTGGCCCGCAGCAGCCGGCCCTTCGAGAGGCGCCTCTATGTCCTGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp GCGCTTGAGGTGTCCGTAGAAGCTGGAATCGAGCCCTaGGGCACCCAGCCCATCTCCAGGGATCAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: ALEVSVEAGIEP*GTQPISRDQAF
Trigger: GAAGGCTTGATCCCTGGAGATGGGCTGGGTGCCGCAGGGCTCGATTCCAGCTTCTACGGACACCTCAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CTGGCAATGCGGCACAGCACAAGCAGCCCATCCTCCTaGATAGACCAGGTGACACGAAGCCGCGTCATCCGC +
Preference number: 6 (lower is better)
Translates to: LAMRHSTSSPSS*IDQVTRSRVIR
Trigger: GCGGATGACGCGGCTTCGTGTCACCTGGTCTATGCAGGAGGATGGGCTGCTTGTGCTGTGCCGCATTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
ENST00000568569.1
CDS GCA 72 bp GATGCAATCTGCGAATGTCCTGGTGCGCCCACCACCTaGCTTCTCCAAGGCCGAGAACCGTCTGCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: DAICECPGAPTT*LLQGREPSAQL
Trigger: GAGCTGCGCAGACGGTTCTCGGCCTTGGAGAAGGCAGGTGGTGGGCGCACCAGGACATTCGCAGATTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 72 bp ATGTCGGCGTCTTCTCTGTCTTTCAGCCGCACGGAGTaGAGGAGCCAAGGCCAGGCAGAGCCCATGGCTACC +
Preference number: 6 (lower is better)
Translates to: MSASSLSFSRTE*RSQGQAEPMAT
Trigger: GGTAGCCATGGGCTCTGCCTGGCCTTGGCTCCTGCACTCCGTGCGGCTGAAAGACAGAGAAGACGCCGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS GCA 72 bp ACCGACACCCTCTTGGTCTTCCTGTGCTGCTCCCGCTaGAGCGGTGTCTTCAAGAGCTGGGGGTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: TDTLLVFLCCSR*SGVFKSWGWRW
Trigger: CCATCTCCACCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS GCA 72 bp GGCCGAGGACTGAGGTTCGAGAACTGTAAAGTCCAGTaGTCTGACGGGGAGTCCCTGACCAGGGCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: GRGLRFENCKVQ*SDGESLTRAGL
Trigger: CAGGCCAGCCCTGGTCAGGGACTCCCCGTCAGAGCACTGGACTTTACAGTTCTCGAACCTCAGTCCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp CTCTGTGAACCCGACACCCTCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LCEPDTLLVFLC*SRCSGVFKSWG
Trigger: CCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTTCACAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS CCA 72 bp TGGTGTGAAGGTCTCGCTGGAGCTCCCCTTGCCACCTaGACCGGCCTAGCCGTTCCAGGATGCAGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: WCEGLAGAPLAT*TGLAVPGCSRR
Trigger: TCTCCTACTGCATCCTGGAACGGCTAGGCCGGTCCAGGTGGCAAGGGGAGCTCCAGCGAGACCTTCACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp AGCCCAGCCAAAGCCGAAGTCCCTGTGGACTGGGATTaGGGGGATGTAGCGCATCCACGAGGCATCGTCGAC +
Preference number: 6 (lower is better)
Translates to: SPAKAEVPVDWD*GDVAHPRGIVD
Trigger: GTCGACGATGCCTCGTGGATGCGCTACATCCCCCCAATCCCAGTCCACAGGGACTTCGGCTTTGGCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CCTGTAACTCTGTGGCATGGTTGTCCCGGGGGCAGCTaGGCATTCAGGGCTTATCCCTCTGTGGACCCCTGG +
Preference number: 6 (lower is better)
Translates to: PVTLWHGCPGGS*AFRAYPSVDPW
Trigger: CCAGGGGTCCACAGAGGGATAAGCCCTGAATGCCCAGCTGCCCCCGGGACAACCATGCCACAGAGTTACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp TCTCCTGTCTGGACAGAGGGGCCCTTGACCGCCAGCTaGGTGGAACCAGGACGTGGTGTCCGCTCTGATGTA +
Preference number: 6 (lower is better)
Translates to: SPVWTEGPLTAS*VEPGRGVRSDV
Trigger: TACATCAGAGCGGACACCACGTCCTGGTTCCACCCAGCTGGCGGTCAAGGGCCCCTCTGTCCAGACAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp GTAGCCCCTCATCAGCAGGTAGTTGGTGTGGGAGGCTaGCGCAGGTTTCACCTCCATGCTCCGGCGCTTGCC +
Preference number: 6 (lower is better)
Translates to: VAPHQQVVGVGG*RRFHLHAPALA
Trigger: GGCAAGCGCCGGAGCATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAACTACCTGCTGATGAGGGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000567843.1
CDS CAA 72 bp CTCTTGGCCTGGGGAACTGAACTCACCGACACCCTCTaGGTCTTCCTGTGCTGCTCCCGCTGCAGCGGTGTC +
Preference number: 6 (lower is better)
Translates to: LLAWGTELTDTL*VFLCCSRCSGV
Trigger: GACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS CAA 72 bp TGCGGCCCCCTTGCTTCCTGTAACTCTGTGGCATGGTaGTCCCGGGGGCAGCTGGGCATTCAGGGCTTATCC +
Preference number: 6 (lower is better)
Translates to: CGPLASCNSVAW*SRGQLGIQGLS
Trigger: GGATAAGCCCTGAATGCCCAGCTGCCCCCGGGACAACCATGCCACAGAGTTACAGGAAGCAAGGGGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 90 bp TCCACCACCTCACGGCTTCCAGTGGTGTACTCCAGCATGGCGCACTaGCGCTCCAGGTTGTGCTTGTCCATGGCGCTCTCCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: STTSRLPVVYSSMAH*RSRLCLSMALSCSF
Trigger: GAAGGAGCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCGTGAGGTGGTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp GCTCAGCTGCTCTTGGCCTGGGGAACTGAACTCACCGACACCCTCTaGGTCTTCCTGTGCTGCTCCCGCTGCAGCGGTGTCTTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: AQLLLAWGTELTDTL*VFLCCSRCSGVFKS
Trigger: GCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCCCCAGGCCAAGAGCAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS CAA 90 bp GCTTTCCAAACTCCCTGCTTCTCTCCTGTCTGGACAGAGGGGCCCTaGACCGCCAGCTGGGTGGAACCAGGACGTGGTGTCCGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: AFQTPCFSPVWTEGP*TASWVEPGRGVRSD
Trigger: ATCAGAGCGGACACCACGTCCTGGTTCCACCCAGCTGGCGGTCAAGGGCCCCTCTGTCCAGACAGGAGAGAAGCAGGGAGTTTGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp GCTTCTCCACGGTGTTGCTGGCAGGGTGCCCGTAGATaGGGTACCACAGAAACATGTGGACCACCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: ASPRCCWQGARR*GTTETCGPPAG
Trigger: GCCTGCGGGTGGTCCACATGTTTCTGTGGTACCTCATCTACGGGCACCCTGCCAGCAACACCGTGGAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp TGTACCAGGGAGCCACTTCCCAGAGCAGGGGGCACCTaGACTGGGCATGAGGCAGATGGGGATGTACCAGGA +
Preference number: 6 (lower is better)
Translates to: CTREPLPRAGGT*TGHEADGDVPG
Trigger: TCCTGGTACATCCCCATCTGCCTCATGCCCAGTTCAGGTGCCCCCTGCTCTGGGAAGTGGCTCCCTGGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp GGTGGAGTGATGAGGCTGGGTCTTGGGCCGGAGGTTTaGAGAGGCTCTTGTGTCTTTCTGGGACCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GGVMRLGLGPEV*RGSCVFLGPSA
Trigger: GGCAGAGGGTCCCAGAAAGACACAAGAGCCTCTGCAAACCTCCGGCCCAAGACCCAGCCTCATCACTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp GAGGAGGACGGCCGGACGCCTGCCCTGCCTGACTCCTaGTTTATCGTTCTCCGTTCACTGATGAAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: EEDGRTPALPDS*FIVLRSLMKLG
Trigger: GCCAAGCTTCATCAGTGAACGGAGAACGATAAAGCAGGAGTCAGGCAGGGCAGGCGTCCGGCCGTCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp GTGTACTCCAGCATGGCGCACTTGCGCTCCAGGTTGTaGTTGTCCATGGCGCTCTCCTGCTCCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VYSSMAHLRSRL*LSMALSCSFCR
Trigger: CCTGCAGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CACGGCTTCCAGTGGTGTACTCCAGCATGGCGCACTTaGGCTCCAGGTTGTGCTTGTCCATGGCGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: HGFQWCTPAWRT*APGCACPWRSP
Trigger: AGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp AGTTGGTGTGGGAGGCTTGCGCAGGTTTCACCTCCATaGTCCGGCGCTTGCCCCCTACACCTTCGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: SWCGRLAQVSPP*SGACPLHLRPS
Trigger: ACTTGGACGAAGGTGTAGGGGGCAAGCGCCGGAGCATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000567843.1
CDS GCA 72 bp ACTGAACTCACCGACACCCTCTTGGTCTTCCTGTGCTaGTCCCGCTGCAGCGGTGTCTTCAAGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TELTDTLLVFLC*SRCSGVFKSWG
Trigger: CCCCCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS GCA 72 bp TGCAAGCAGCGTCCCAGGCCCGGACAAGCCCCACATTaGAGGAAGCCAGCGAACACCTCATTTTCCACCCAG +
Preference number: 6 (lower is better)
Translates to: CKQRPRPGQAPH*RKPANTSFSTQ
Trigger: CTGGGTGGAAAATGAGGTGTTCGCTGGCTTCCTGCAATGTGGGGCTTGTCCGGGCCTGGGACGCTGCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp GGAGGTGCAGGCAAGCAGTATGGTGGTACTGCATGTTaGCTGGGGCCTGAACATCACAGCCGGGCCACTGAG +
Preference number: 6 (lower is better)
Translates to: GGAGKQYGGTAC*LGPEHHSRATE
Trigger: CTCAGTGGCCCGGCTGTGATGTTCAGGCCCCAGGCAACATGCAGTACCACCATACTGCTTGCCTGCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp CCCTCCTGGCCTATCAAGGCCCTGTACCGCATGGCCTaGGAGGCAACGATGATCAGTTTCTTCCCCCACCTG +
Preference number: 6 (lower is better)
Translates to: PSWPIKALYRMA*EATMISFFPHL
Trigger: CAGGTGGGGGAAGAAACTGATCATCGTTGCCTCCCAGGCCATGCGGTACAGGGCCTTGATAGGCCAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CCACCACCTCACGGCTTCCAGTGGTGTACTCCAGCATaGCGCACTTGCGCTCCAGGTTGTGCTTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: PPPHGFQWCTPA*RTCAPGCACPW
Trigger: CCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCGTGAGGTGGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp TGCCGGGGGAGTAGTAGCCCCTCATCAGCAGGTAGTTaGTGTGGGAGGCTTGCGCAGGTTTCACCTCCATGC +
Preference number: 6 (lower is better)
Translates to: CRGSSSPSSAGS*CGRLAQVSPPC
Trigger: GCATGGAGGTGAAACCTGCGCAAGCCTCCCACACCAACTACCTGCTGATGAGGGGCTACTACTCCCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GCGGGCACAGGGGTGCAGCGGAGCTGGAACTTCATCTaGCAGGAGTTGACCACAATGCTGTCGTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: AGTGVQRSWNFI*QELTTMLSLGL
Trigger: CAACCCCAACGACAGCATTGTGGTCAACTCCTGCCAGATGAAGTTCCAGCTCCGCTGCACCCCTGTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GCCTCCATCATACCCTTGCATACAGGAAGGTTCAGGTaGCCATCCACGACACGCCACGGCCGGCCGATGAAG +
Preference number: 6 (lower is better)
Translates to: ASIIPLHTGRFR*PSTTRHGRPMK
Trigger: CTTCATCGGCCGGCCGTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 72 bp TTCCACCACGGGTGTAGAGAAGAGCGAGACAGGCCTTaGCTTTCTCAGCCAGCGCTTCCGGATGCAGCCGAG +
Preference number: 6 (lower is better)
Translates to: FHHGCREERDRP*LSQPALPDAAE
Trigger: CTCGGCTGCATCCGGAAGCGCTGGCTGAGAAAGCCAAGGCCTGTCTCGCTCTTCTCTACACCCGTGGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 72 bp GGAGGGTACAGTCCAAGGTGGGCTCATAGAAAGCCATaGGGCTCTCGTCCAGGCTGGAGGGCACTTCCACCT +
Preference number: 6 (lower is better)
Translates to: GGYSPRWAHRKP*GSRPGWRALPP
Trigger: AGGTGGAAGTGCCCTCCAGCCTGGACGAGAGCCCCATGGCTTTCTATGAGCCCACCTTGGACTGTACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CCA 72 bp TTCTGCGGCCCCCTTGCTTCCTGTAACTCTGTGGCATaGTTGTCCCGGGGGCAGCTGGGCATTCAGGGCTTA +
Preference number: 6 (lower is better)
Translates to: FCGPLASCNSVA*LSRGQLGIQGL
Trigger: TAAGCCCTGAATGCCCAGCTGCCCCCGGGACAACCATGCCACAGAGTTACAGGAAGCAAGGGGGCCGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp AGCGCTGGCTGGAGCCACCACGCTGAATCTCATTTGTaGAGGAGAGGCCTGCAGCGCGGGATAAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: SAGWSHHAESHL*RRGLQRGINPS
Trigger: GCTGGGATTTATCCCGCGCTGCAGGCCTCTCCTCCACAAATGAGATTCAGCGTGGTGGCTCCAGCCAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp GTGGTGTACTCCAGCATGGCGCACTTGCGCTCCAGGTaGTGCTTGTCCATGGCGCTCTCCTGCTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VVYSSMAHLRSR*CLSMALSCSFC
Trigger: GCAGAAGGAGCAGGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp TCACGGCTTCCAGTGGTGTACTCCAGCATGGCGCACTaGCGCTCCAGGTTGTGCTTGTCCATGGCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SRLPVVYSSMAH*RSRLCLSMALS
Trigger: GGAGAGCGCCATGGACAAGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCACTGGAAGCCGTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp CAGGGCGTGGCTCCACCTCGGAGTACCCAAGGCTCCTaGCAGGTACTCACCTGTAGTAGGTCTGGGATAGCT +
Preference number: 6 (lower is better)
Translates to: QGVAPPRSTQGS*QVLTCSRSGIA
Trigger: AGCTATCCCAGACCTACTACAGGTGAGTACCTGTCAGGAGCCTTGGGTACTCCGAGGTGGAGCCACGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS GCA 72 bp GTCAAGAGCTCGCTGCGGGCCTTCTCTCTTTGGTACTaGCGGCTTAGGTCGCTCTCCTCTGCAAACACGCAG +
Preference number: 6 (lower is better)
Translates to: VKSSLRAFSLWY*RLRSLSSANTQ
Trigger: CTGCGTGTTTGCAGAGGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp GGAACTGAACTCACCGACACCCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGTGTCTTCAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GTELTDTLLVFL*CSRCSGVFKSW
Trigger: CCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGTGAGTTCAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000562609.2
CDS GCA 72 bp GCTGATGACAGACGTGCAGGAAAGGAAAGGGCGTGCTaGCACCCGAGGAAGTTGAGACCCCCATGCCATCAC +
Preference number: 6 (lower is better)
Translates to: ADDRRAGKERAC*HPRKLRPPCHH
Trigger: GTGATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGTCATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp GCTGCTGATGACAGACGTGCAGGAAAGGAAAGGGCGTaGTGCCACCCGAGGAAGTTGAGACCCCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: AADDRRAGKERA*CHPRKLRPPCH
Trigger: ATGGCATGGGGGTCTCAACTTCCTCGGGTGGCAGCACGCCCTTTCCTTTCCTGCACGTCTGTCATCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp ACTCTCTGTGAACCCGACACCCTCTTGGTCTTCCTGTaGTGCTCCCGCTGCAGCGGTGTCTTCAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TLCEPDTLLVFL*CSRCSGVFKSW
Trigger: CCAGCTCTTGAAGACACCGCTGCAGCGGGAGCAGCACAGGAAGACCAAGAGGGTGTCGGGTTCACAGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS GCA 72 bp CGGGAGCGTGACCCTGAAGCTCTGCTCCACGCCATGTaGAGAGTTCCAGGCACACTTTCCTCGAAACAGACG +
Preference number: 6 (lower is better)
Translates to: RERDPEALLHAM*RVPGTLSSKQT
Trigger: CGTCTGTTTCGAGGAAAGTGTGCCTGGAACTCTGCACATGGCGTGGAGCAGAGCTTCAGGGTCACGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp ACGGTGGTCAAGAGCTCGCTGCGGGCCTTCTCTCTTTaGTACTGCCGGCTTAGGTCGCTCTCCTCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: TVVKSSLRAFSL*YCRLRSLSSAN
Trigger: GTTTGCAGAGGAGAGCGACCTAAGCCGGCAGTACCAAAGAGAGAAGGCCCGCAGCGAGCTCTTGACCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp TTCTTCCCAGGGTCCTTCTTCAGCCGCTTCCGCTTCTaGCTTTTCCCACCCCTCACTCTCCGGTTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: FFPGSFFSRFRF*LFPPLTLRFRS
Trigger: GGACCGAAACCGGAGAGTGAGGGGTGGGAAAAGCCAGAAGCGGAAGCGGCTGAAGAAGGACCCTGGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 72 bp GGGCTGGCCTTTTCTTCTTGCCCTGCGAGGGCCACATaGAACCATCCCAGAAACGGCTTACCTGGCGAACAG +
Preference number: 6 (lower is better)
Translates to: GLAFSSCPARAT*NHPRNGLPGEQ
Trigger: CTGTTCGCCAGGTAAGCCGTTTCTGGGATGGTTCCATGTGGCCCTCGCAGGGCAAGAAGAAAAGGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS CCA 72 bp GTGCAGGCAAGCAGTATGGTGGTACTGCATGTTGCCTaGGGCCTGAACATCACAGCCGGGCCACTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: VQASSMVVLHVA*GLNITAGPLSA
Trigger: TGCACTCAGTGGCCCGGCTGTGATGTTCAGGCCCCAGGCAACATGCAGTACCACCATACTGCTTGCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp AGGCAGCTGCCTGAGCAGCACGTGTACAGCGCTGGCTaGAGCCACCACGCTGAATCTCATTTGTGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RQLPEQHVYSAG*SHHAESHLWRR
Trigger: TCTCCTCCACAAATGAGATTCAGCGTGGTGGCTCCAGCCAGCGCTGTACACGTGCTGCTCAGGCAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp ACCTGTGGCCTCCTTGGCGGAAAAGGTAGCCTCTCCTaGTCCACTGGCCTCACTTGGCACAAGTCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TCGLLGGKGSLS*STGLTWHKSCH
Trigger: GTGGCAGGACTTGTGCCAAGTGAGGCCAGTGGACAAGGAGAGGCTACCTTTTCCGCCAAGGAGGCCACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568569.1
CDS CAA 72 bp CTCACCTGTAGTAGGTCTGGGATAGCTGGTAGGACATaGGCACGAAGGGGAGGGCCCGGTTCTTCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: LTCSRSGIAGRT*ARRGGPGSSWG
Trigger: GCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTATCCCAGACCTACTACAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571886.1
CDS CAA 90 bp CCAGGCCTGGTCATGATGTGGTACAGCATGGCCTCCATCATACCCTaGCATACAGGAAGGTTCAGGTGGCCATCCACGACACGCCACGGC +
Preference number: 6 (lower is better)
Translates to: PGLVMMWYSMASIIP*HTGRFRWPSTTRHG
Trigger: GCCGTGGCGTGTCGTGGATGGCCACCTGAACCTTCCTGTATGCAAGGGTATGATGGAGGCCATGCTGTACCACATCATGACCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CAA 90 bp CTTCCCGGACCTGCTGATAAGGGAGACAGGGCTGGCCTTTTCTTCTaGCCCTGCGAGGGCCACATGGAACCATCCCAGAAACGGCTTACC +
Preference number: 6 (lower is better)
Translates to: LPGPADKGDRAGLFF*PCEGHMEPSQKRLT
Trigger: GGTAAGCCGTTTCTGGGATGGTTCCATGTGGCCCTCGCAGGGCAAGAAGAAAAGGCCAGCCCTGTCTCCCTTATCAGCAGGTCCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS CAA 90 bp GGCAGACGCACTGCAGGTCAAACCAGTAGTTTTCCACATCCTGCATaGAGTTCAGGACATAGAGGCGCCTCTCGAAGGGCCGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GRRTAGQTSSFPHPA*SSGHRGASRRAGCC
Trigger: GCAGCAGCCGGCCCTTCGAGAGGCGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAAACTACTGGTTTGACCTGCAGTGCGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp TGCAGCTTCCCAGCATCAACCTTGAAAGCAGTGGTGTaGAGGTCTCGCTGGAGCTCCCCTTGCCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: CSFPASTLKAVV*RSRWSSPCHLD
Trigger: GTCCAGGTGGCAAGGGGAGCTCCAGCGAGACCTTCACACCACTGCTTTCAAGGTTGATGCTGGGAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp ACTTCCAGAGGAGGACGGCCGGACGCCTGCCCTGCCTaGCTCCTGCTTTATCGTTCTCCGTTCACTGATGAA +
Preference number: 6 (lower is better)
Translates to: TSRGGRPDACPA*LLLYRSPFTDE
Trigger: TTCATCAGTGAACGGAGAACGATAAAGCAGGAGTCAGGCAGGGCAGGCGTCCGGCCGTCCTCCTCTGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp TTGTGTCTTTCTGGGACCCTCTGCCTCTCCGCTTGCTaGTGCTCCTCTCCTCCTCACTGTCCGACTCAGAGA +
Preference number: 6 (lower is better)
Translates to: LCLSGTLCLSAC*CSSPPHCPTQR
Trigger: TCTCTGAGTCGGACAGTGAGGAGGAGAGGAGCAGCAGCAAGCGGAGAGGCAGAGGGTCCCAGAAAGACACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp ACCTGCTCGATGGCACTTCTCACTAGAGGGTCGTTCTaGTCCATGGACGGGTGCACCACCAGATCCACCTTC +
Preference number: 6 (lower is better)
Translates to: TCSMALLTRGSF*SMDGCTTRSTF
Trigger: GAAGGTGGATCTGGTGGTGCACCCGTCCATGGACCAGAACGACCCTCTAGTGAGAAGTGCCATCGAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp AACGCCTCTTGTACAGAAGCTGCTGCCGAATGGGCCTaGGGAGAAAGCGGATCAGCGTGTGCTTCTTCAGCG +
Preference number: 6 (lower is better)
Translates to: NASCTEAAAEWA*GESGSACASSA
Trigger: CGCTGAAGAAGCACACGCTGATCCGCTTTCTCCCCAGGCCCATTCGGCAGCAGCTTCTGTACAAGAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GCACTGAGGGGCATTGGGCGCTTGGACAGAAATGTCTaGAGCCTCACTGTGAGTCCATTCTCTGCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: ALRGIGRLDRNV*SLTVSPFSAAV
Trigger: CACTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 72 bp AGGTTCCCATTGTTAGCTCTTCCAGAGGAGCGGCTGTaGGGACACAGAGGAAGATCAGAGGCAGCCCGACAG +
Preference number: 6 (lower is better)
Translates to: RFPLLALPEERL*GHRGRSEAARQ
Trigger: CTGTCGGGCTGCCTCTGATCTTCCTCTGTGTCCCCACAGCCGCTCCTCTGGAAGAGCTAACAATGGGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CAA 72 bp CTGCTGTTGCCTCTGGCACTGAGGGGCATTGGGCGCTaGGACAGAAATGTCTGGAGCCTCACTGTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: LLLPLALRGIGR*DRNVWSLTVSP
Trigger: TGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CAA 72 bp AACTTCATCTGGCAGGAGTTGACCACAATGCTGTCGTaGGGGTTGAGGTTGCGGGTGCTGACGATGCCGGGG +
Preference number: 6 (lower is better)
Translates to: NFIWQELTTMLS*GLRLRVLTMPG
Trigger: CCCCGGCATCGTCAGCACCCGCAACCTCAACCCCAACGACAGCATTGTGGTCAACTCCTGCCAGATGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp AAGCAGACACTCTCACAGTCCCTTTCCCGTGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCTGTGAACCCTCTGGGGTCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: KQTLSQSLSRAAWEM*AAPKLSVNPLGSSE
Trigger: CTCTGAAGACCCCAGAGGGTTCACAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000569653.1
CDS CAA 90 bp AAGCAGACACTCTCACAGTCCCTTTCCCGTGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCTGTGAACCCGACACCCTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: KQTLSQSLSRAAWEM*AAPKLSVNPTPSWS
Trigger: AGACCAAGAGGGTGTCGGGTTCACAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561623.5
CDS CAA 90 bp CTGGGCGGGGCTGCCGAGCTTAGGATCAGGGCCTTCCCTCTTCCTTaGGTTTCAATGGGAACAGCCATTCCAGGTTGTTCTGCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: LGGAAELRIRAFPLP*VSMGTAIPGCSAAK
Trigger: TTTGGCTGCAGAACAACCTGGAATGGCTGTTCCCATTGAAACCAAAGGAAGAGGGAAGGCCCTGATCCTAAGCTCGGCAGCCCCGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567806.1
CDS GCA 72 bp AGTGGGAGACAAAGGACACGTTGGGTTCTGAGACGCTaGTGGTATCTAAGAGGCTGTCCCTGCTGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: SGRQRTRWVLRR*WYLRGCPCWQG
Trigger: GCCTTGCCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp TCCGGACCTCCTCGATCACAGCTATGTCACCACTGTTaGTGTCCGCACAGTGGGAGACAAAGGACACGTTGG +
Preference number: 6 (lower is better)
Translates to: SGPPRSQLCHHC*CPHSGRQRTRW
Trigger: CCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACATAGCTGTGATCGAGGAGGTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CAGACAGGTTCCGCACCAAGCGGACAATGGACTTCTTaGAGCACTTGGTGGACACGCCTTCCTGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: QTGSAPSGQWTS*STWWTRLPASP
Trigger: AGGAGAAGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGCGGAACCTGTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CTGCTGATAAGGGAGACAGGGCTGGCCTTTTCTTCTTaGCCTGCGAGGGCCACATGGAACCATCCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: LLIRETGLAFSS*PARATWNHPRN
Trigger: GTTTCTGGGATGGTTCCATGTGGCCCTCGCAGGGCAAGAAGAAAAGGCCAGCCCTGTCTCCCTTATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS GCA 72 bp TGTGGCAAAACTCACGGGAGCGTGACCCTGAAGCTCTaGTCCACGCCATGTGCAGAGTTCCAGGCACACTTT +
Preference number: 6 (lower is better)
Translates to: CGKTHGSVTLKL*STPCAEFQAHF
Trigger: AAAGTGTGCCTGGAACTCTGCACATGGCGTGGAGCAGAGCTTCAGGGTCACGCTCCCGTGAGTTTTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp CATGGGGAATTTGACACTCAACTTCAAGCTCCTAGCTaGCAGAGGAGCTGGAGGCCCCAGGCACACATGGGA +
Preference number: 6 (lower is better)
Translates to: HGEFDTQLQAPS*QRSWRPQAHMG
Trigger: TCCCATGTGTGCCTGGGGCCTCCAGCTCCTCTGGCAGCTAGGAGCTTGAAGTTGAGTGTCAAATTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp GACACCACCTTGGCTAGCCCGGCGTTCAGCATATACTaGTACAGACGCTTAAACGTCCTTTCGCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: DTTLASPAFSIY*YRRLNVLSHSP
Trigger: GGGGCTGTGCGAAAGGACGTTTAAGCGTCTGTACCAGTATATGCTGAACGCCGGGCTAGCCAAGGTGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GGGAGACAAAGGACACGTTGGGTTCTGAGACGCTGCTaGTATCTAAGAGGCTGTCCCTGCTGGCAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GRQRTRWVLRRC*YLRGCPCWQGS
Trigger: AGAGCCTTGCCAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GACCTTCCTCAGACAGGTTCCGCACCAAGCGGACAATaGACTTCTTGCAGCACTTGGTGGACACGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: DLPQTGSAPSGQ*TSCSTWWTRLP
Trigger: AGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGCGGAACCTGTCTGAGGAAGGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp ACAGAAACATGTGGACCACCCGCAGGCGAGGCATTTTaGGCAGAAATCCTAGAGAACGCCCCAGTCCGGGAA +
Preference number: 6 (lower is better)
Translates to: TETCGPPAGEAF*AEILENAPVRE
Trigger: TTCCCGGACTGGGGCGTTCTCTAGGATTTCTGCCCAAAATGCCTCGCCTGCGGGTGGTCCACATGTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp AGGGAGCTCTCGGGGATGCCAGGCCTGGTCATGATGTaGTACAGCATGGCCTCCATCATACCCTTGCATACA +
Preference number: 6 (lower is better)
Translates to: RELSGMPGLVMM*YSMASIIPLHT
Trigger: TGTATGCAAGGGTATGATGGAGGCCATGCTGTACCACATCATGACCAGGCCTGGCATCCCCGAGAGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000564747.1
ENST00000569653.1
CDS CAA 72 bp TCAGACAGGTTCCGCACCAAGCGGACAATGGACTTCTaGCAGCACTTGGTGGACACGCCTTCCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SDRFRTKRTMDF*QHLVDTPSCFS
Trigger: GGAGAAGCAGGAAGGCGTGTCCACCAAGTGCTGCAAGAAGTCCATTGTCCGCTTGGTGCGGAACCTGTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp AAATCCTGTAGTAGGTCTGGGATAGCTGGTAGGACATaGGCACGAAGGGGAGGGCCCGGTTCTTCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: KSCSRSGIAGRT*ARRGGPGSSWG
Trigger: GCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTATCCCAGACCTACTACAGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000569394.5
CDS CAA 72 bp CCTGCTGATAAGGGAGACAGGGCTGGCCTTTTCTTCTaGCCCTGCGAGGGCCACATGGAACCATCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: PADKGDRAGLFF*PCEGHMEPSQK
Trigger: TTTCTGGGATGGTTCCATGTGGCCCTCGCAGGGCAAGAAGAAAAGGCCAGCCCTGTCTCCCTTATCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS CAA 90 bp ATGTCACCACTGTTGCTGTCCGCACAGTGGGAGACAAAGGACACGTaGGGTTCTGAGACGCTGCTGGTATCTAAGAGGCTGTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: MSPLLLSAQWETKDT*GSETLLVSKRLSLL
Trigger: CAGCAGGGACAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp GGGTTTTCCATCCGGACCTCCTCGATCACAGCTATGTCACCACTGTaGCTGTCCGCACAGTGGGAGACAAAGGACACGTTGGGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: GFSIRTSSITAMSPL*LSAQWETKDTLGSE
Trigger: CTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACATAGCTGTGATCGAGGAGGTCCGGATGGAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp CCACCTGCCTTCTCCAAGGCCGAGAACCGTCTGCGCAGCTCCTCCTaGTCAATCCCAAAACAACCCGTGGCTATAATGGCTTCCAAGATC +
Preference number: 6 (lower is better)
Translates to: PPAFSKAENRLRSSS*SIPKQPVAIMASKI
Trigger: GATCTTGGAAGCCATTATAGCCACGGGTTGTTTTGGGATTGACAAGGAGGAGCTGCGCAGACGGTTCTCGGCCTTGGAGAAGGCAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 90 bp AAGCAGACACTCTCACAGTCCCTTTCCCGTGCTGCCTGGGAGATGTaGGCAGCTCCGAAACTCTCTGTGAACCCTGAGGGAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: KQTLSQSLSRAAWEM*AAPKLSVNPEGRGR
Trigger: TCTTCCTCTTCCCTCAGGGTTCACAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CAA 90 bp TTGGCACAAACCTGTGGCCTCCTTGGCGGAAAAGGTAGCCTCTCCTaGTCCACTGGCCTCACTTGGCACAAGTCCTGCCACACACACTTT +
Preference number: 6 (lower is better)
Translates to: LAQTCGLLGGKGSLS*STGLTWHKSCHTHF
Trigger: AAAGTGTGTGTGGCAGGACTTGTGCCAAGTGAGGCCAGTGGACAAGGAGAGGCTACCTTTTCCGCCAAGGAGGCCACAGGTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568569.1
CDS TCA 72 bp AGGGTGCTAGGTCCCATTCTGTGTTCAAGTCACCCATaGGAGGAGAGACAGGAGGGCCACTGCAAGGCCAAA +
Preference number: 6 (lower is better)
Translates to: RVLGPILCSSHP*EERQEGHCKAK
Trigger: TTTGGCCTTGCAGTGGCCCTCCTGTCTCTCCTCTCATGGGTGACTTGAACACAGAATGGGACCTAGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS GCA 72 bp TTGGCTGTGCTTGAATTGGAGATCCGGAAGCGGACCTaGTCGATGGCACTTCTCACTAGAGGGTCGTTCTGG +
Preference number: 6 (lower is better)
Translates to: LAVLELEIRKRT*SMALLTRGSFW
Trigger: CCAGAACGACCCTCTAGTGAGAAGTGCCATCGAGCAGGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CCCAGCTCTTCCCTCAGCTTTCCCAGCGTCTCTATGTaGTTAGTCCGTGTGCTCAGCATGACCGAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: PSSSLSFPSVSM*LVRVLSMTESF
Trigger: GAAGCTTTCGGTCATGCTGAGCACACGGACTAACCACATAGAGACGCTGGGAAAGCTGAGGGAAGAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CAGGGTGGATCTCTTGCAAGCGAAGAGACACCACCTTaGCTAGCCCGGCGTTCAGCATATACTGGTACAGAC +
Preference number: 6 (lower is better)
Translates to: QGGSLASEETPP*LARRSAYTGTD
Trigger: GTCTGTACCAGTATATGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CTGTGTGAGCATATCCCGCTCGAACACAATGTCCACTaGAGGCACTGTCTTGGAGATGACCTCCTCGTCCTC +
Preference number: 6 (lower is better)
Translates to: LCEHIPLEHNVH*RHCLGDDLLVL
Trigger: GAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTCGAGCGGGATATGCTCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CTCCTGCTTTATCGTTCTCCGTTCACTGATGAAGCTTaGCTTCTCCACGGTGTTGCTGGCAGGGTGCCCGTA +
Preference number: 6 (lower is better)
Translates to: LLLYRSPFTDEA*LLHGVAGRVPV
Trigger: TACGGGCACCCTGCCAGCAACACCGTGGAGAAGCCAAGCTTCATCAGTGAACGGAGAACGATAAAGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp ATTCAACCTGCTGTTGCCTCTGGCACTGAGGGGCATTaGGCGCTTGGACAGAAATGTCTGGAGCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: IQPAVASGTEGH*ALGQKCLEPHC
Trigger: ACAGTGAGGCTCCAGACATTTCTGTCCAAGCGCCCAATGCCCCTCAGTGCCAGAGGCAACAGCAGGTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 72 bp GTCAGGTCTTCGGGACTATACCCAGACAGCTCCAGCTaGAGGACAAACTCCTCCAAGCTGCAGGTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: VRSSGLYPDSSS*RTNSSKLQVFS
Trigger: GGAAAACACCTGCAGCTTGGAGGAGTTTGTCCTCCAGCTGGAGCTGTCTGGGTATAGTCCCGAAGACCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CCA 72 bp AAGCAGACACTCTCACAGTCCCTTTCCCGTGCTGCCTaGGAGATGTTGGCAGCTCCGAAACTCTCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: KQTLSQSLSRAA*EMLAAPKLSVN
Trigger: GTTCACAGAGAGTTTCGGAGCTGCCAACATCTCCCAGGCAGCACGGGAAAGGGACTGTGAGAGTGTCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
ENST00000569653.1
CDS CCA 72 bp CTGATCCGTGACCCTAGGCCTCTGACTACAGCTGACTaGGACACAACAGCTGACTGGATTTCTCTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: LIRDPRPLTTAD*DTTADWISLGH
Trigger: GTGGCCAAGAGAAATCCAGTCAGCTGTTGTGTCCCAGTCAGCTGTAGTCAGAGGCCTAGGGTCACGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CCA 72 bp GAGGGCCACATGGAACCATCCCAGAAACGGCTTACCTaGCGAACAGCTCCTGGAGTGTGTCTGGGATTTCAA +
Preference number: 6 (lower is better)
Translates to: EGHMEPSQKRLT*RTAPGVCLGFQ
Trigger: TTGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAGGTAAGCCGTTTCTGGGATGGTTCCATGTGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS CAA 72 bp TCCCGCTCGAACACAATGTCCACTGGAGGCACTGTCTaGGAGATGACCTCCTCGTCCTCGTCATCATCATGG +
Preference number: 6 (lower is better)
Translates to: SRSNTMSTGGTV*EMTSSSSSSSW
Trigger: CCATGATGATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTCGAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp CTGTTGCTGTCCGCACAGTGGGAGACAAAGGACACGTaGGGTTCTGAGACGCTGCTGGTATCTAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLLSAQWETKDT*GSETLLVSKRL
Trigger: CAGCCTCTTAGATACCAGCAGCGTCTCAGAACCCAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp ATCCGGACCTCCTCGATCACAGCTATGTCACCACTGTaGCTGTCCGCACAGTGGGAGACAAAGGACACGTTG +
Preference number: 6 (lower is better)
Translates to: IRTSSITAMSPL*LSAQWETKDTL
Trigger: CAACGTGTCCTTTGTCTCCCACTGTGCGGACAGCAACAGTGGTGACATAGCTGTGATCGAGGAGGTCCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp TGCCGGCTTAGGTCGCTCTCCTCTGCAAACACGCAGGAAATGTACTaGGTGGTTCGCTGCCGACCTTCGTCTTCCATGAATCCCTTGACA +
Preference number: 6 (lower is better)
Translates to: CRLRSLSSANTQEMY*VVRCRPSSSMNPLT
Trigger: TGTCAAGGGATTCATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGTGTTTGCAGAGGAGAGCGACCTAAGCCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp ATGAGGTACCACAGAAACATGTGGACCACCCGCAGGCGAGGCATTTaGGGCAGAAATCCTAGAGAACGCCCCAGTCCGGGAACTACAATG +
Preference number: 6 (lower is better)
Translates to: MRYHRNMWTTRRRGI*GRNPRERPSPGTTM
Trigger: CATTGTAGTTCCCGGACTGGGGCGTTCTCTAGGATTTCTGCCCAAAATGCCTCGCCTGCGGGTGGTCCACATGTTTCTGTGGTACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp CTGCAGGTCAAACCAGTAGTTTTCCACATCCTGCATTaGGTTCAGGACATAGAGGCGCCTCTCGAAGGGCCG +
Preference number: 6 (lower is better)
Translates to: LQVKPVVFHILH*VQDIEAPLEGP
Trigger: CGGCCCTTCGAGAGGCGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAAACTACTGGTTTGACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp TTTGTCTTACAAGGTCCACATTCAGGGTGGATCTCTTaGAAGCGAAGAGACACCACCTTGGCTAGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: FVLQGPHSGWIS*KRRDTTLASPA
Trigger: CGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACCTTGTAAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CTTCTCACTAGAGGGTCGTTCTGGTCCATGGACGGGTaGACCACCAGATCCACCTTCTTCTTGATGCCATCT +
Preference number: 6 (lower is better)
Translates to: LLTRGSFWSMDG*TTRSTFFLMPS
Trigger: AGATGGCATCAAGAAGAAGGTGGATCTGGTGGTGCACCCGTCCATGGACCAGAACGACCCTCTAGTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp TCAGGGTGGATCTCTTGCAAGCGAAGAGACACCACCTaGGCTAGCCCGGCGTTCAGCATATACTGGTACAGA +
Preference number: 6 (lower is better)
Translates to: SGWISCKRRDTT*ASPAFSIYWYR
Trigger: TCTGTACCAGTATATGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp GGCTGGGAAGTTTTAACCCTGTTGGCTGTGCTTGAATaGGAGATCCGGAAGCGGACCTGCTCGATGGCACTT +
Preference number: 6 (lower is better)
Translates to: GWEVLTLLAVLE*EIRKRTCSMAL
Trigger: AAGTGCCATCGAGCAGGTCCGCTTCCGGATCTCCAATTCAAGCACAGCCAACAGGGTTAAAACTTCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp TTCTCCAAGGCCGAGAACCGTCTGCGCAGCTCCTCCTaGTCAATCCCAAAACAACCCGTGGCTATAATGGCT +
Preference number: 6 (lower is better)
Translates to: FSKAENRLRSSS*SIPKQPVAIMA
Trigger: AGCCATTATAGCCACGGGTTGTTTTGGGATTGACAAGGAGGAGCTGCGCAGACGGTTCTCGGCCTTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 90 bp GGTCCACATTCAGGGTGGATCTCTTGCAAGCGAAGAGACACCACCTaGGCTAGCCCGGCGTTCAGCATATACTGGTACAGACGCTTAAAC +
Preference number: 6 (lower is better)
Translates to: GPHSGWISCKRRDTT*ASPAFSIYWYRRLN
Trigger: GTTTAAGCGTCTGTACCAGTATATGCTGAACGCCGGGCTAGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp GTGAGCATATCCCGCTCGAACACAATGTCCACTGGAGGCACTGTCTaGGAGATGACCTCCTCGTCCTCGTCATCATCATGGTCATTCCGT +
Preference number: 6 (lower is better)
Translates to: VSISRSNTMSTGGTV*EMTSSSSSSSWSFR
Trigger: ACGGAATGACCATGATGATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTCGAGCGGGATATGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp CGAACACAATGTCCACTGGAGGCACTGTCTTGGAGATaGCCTCCTCGTCCTCGTCATCATCATGGTCATTCC +
Preference number: 6 (lower is better)
Translates to: RTQCPLEALSWR*PPRPRHHHGHS
Trigger: GGAATGACCATGATGATGACGAGGACGAGGAGGTCATCTCCAAGACAGTGCCTCCAGTGGACATTGTGTTCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp TTGGGCGCTTGGACAGAAATGTCTGGAGCCTCACTGTaGGTCCATTCTCTGCGGCAGTGTTCTCCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: LGAWTEMSGASL*VHSLRQCSPFW
Trigger: CCAAAAAGGAGAACACTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGACATTTCTGTCCAAGCGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS GCA 72 bp GCTCTCTCTTCAGCAGCTCCTGGGAAGGAGGGCGGCTaGTTTTTCAATGGGTGTAGGTTTACAACTTTCCAC +
Preference number: 6 (lower is better)
Translates to: ALSSAAPGKEGG*FFNGCRFTTFH
Trigger: GTGGAAAGTTGTAAACCTACACCCATTGAAAAAGCAGCCGCCCTCCTTCCCAGGAGCTGCTGAAGAGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp AATGTGAGAGACTCGGAAAGTCAGGGAAGCCATCTCTaGCCTCCAACCTTCAGCATGGTACCTAGCATGAGC +
Preference number: 6 (lower is better)
Translates to: NVRDSESQGSHL*PPTFSMVPSMS
Trigger: GCTCATGCTAGGTACCATGCTGAAGGTTGGAGGGCAGAGATGGCTTCCCTGACTTTCCGAGTCTCTCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp CCCTGGAGACACCAGACACACAGGTTACAGCGGCACTaGCCTCGCCTGCTTGTTGATTTATTCTTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: PWRHQTHRLQRH*PRLLVDLFFKH
Trigger: ATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCGCTGTAACCTGTGTGTCTGGTGTCTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CCA 72 bp ATCCCAGCTTCCTGTGAGCCAAGACTGGCTTCCAGGTaGGGTTTTGTTTGGCTCATGGGGAATTTGACACTC +
Preference number: 6 (lower is better)
Translates to: IPASCEPRLASR*GFVWLMGNLTL
Trigger: GAGTGTCAAATTCCCCATGAGCCAAACAAAACCCCACCTGGAAGCCAGTCTTGGCTCACAGGAAGCTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS CAA 72 bp TCCTGTCCACATGAAACCGGTTCAGTAGGAGGAGGATaGAGTGTTGCTGGGCTCCAGTGGGTAATCGGATCA +
Preference number: 6 (lower is better)
Translates to: SCPHETGSVGGG*SVAGLQWVIGS
Trigger: TGATCCGATTACCCACTGGAGCCCAGCAACACTCAATCCTCCTCCTACTGAACCGGTTTCATGTGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp AGGTCGCTCTCCTCTGCAAACACGCAGGAAATGTACTaGGTGGTTCGCTGCCGACCTTCGTCTTCCATGAAT +
Preference number: 6 (lower is better)
Translates to: RSLSSANTQEMY*VVRCRPSSSMN
Trigger: ATTCATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGTGTTTGCAGAGGAGAGCGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp ACTGCAGGTCAAACCAGTAGTTTTCCACATCCTGCATaGAGTTCAGGACATAGAGGCGCCTCTCGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: TAGQTSSFPHPA*SSGHRGASRRA
Trigger: GGCCCTTCGAGAGGCGCCTCTATGTCCTGAACTCAATGCAGGATGTGGAAAACTACTGGTTTGACCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp TCCAAGCTGCAGGTGTTTTCCTGGGGGTTTATCAGCTaGGTGAACGTATCAGGGAGGCAGGAGGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: SKLQVFSWGFIS*VNVSGRQEVPI
Trigger: AATGGGAACCTCCTGCCTCCCTGATACGTTCACCAAGCTGATAAACCCCCAGGAAAACACCTGCAGCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 90 bp ATTTGCTCCTCCTGTCCACATGAAACCGGTTCAGTAGGAGGAGGATaGAGTGTTGCTGGGCTCCAGTGGGTAATCGGATCACATGGGACT +
Preference number: 6 (lower is better)
Translates to: ICSSCPHETGSVGGG*SVAGLQWVIGSHGT
Trigger: AGTCCCATGTGATCCGATTACCCACTGGAGCCCAGCAACACTCAATCCTCCTCCTACTGAACCGGTTTCATGTGGACAGGAGGAGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp ACAAACTCCTCCAAGCTGCAGGTGTTTTCCTGGGGGTTTATCAGCTaGGTGAACGTATCAGGGAGGCAGGAGGTTCCCATTGTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: TNSSKLQVFSWGFIS*VNVSGRQEVPIVSS
Trigger: AGAGCTAACAATGGGAACCTCCTGCCTCCCTGATACGTTCACCAAGCTGATAAACCCCCAGGAAAACACCTGCAGCTTGGAGGAGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS CAA 90 bp GACACCAGACACACAGGTTACAGCGGCACTGCCCTCGCCTGCTTGTaGATTTATTCTTCAAGCATTTATGGAATGCCCCCTCTGTACCAG +
Preference number: 6 (lower is better)
Translates to: DTRHTGYSGTALACL*IYSSSIYGMPPLYQ
Trigger: CTGGTACAGAGGGGGCATTCCATAAATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCGCTGTAACCTGTGTGTCTGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS TCA 72 bp CTTCCCCAAGCTTTTGATGACCTCATTCTCCACCATTaGGCTGTCTACCACGATGATCTGCTCCGGGATCCT +
Preference number: 6 (lower is better)
Translates to: LPQAFDDLILHH*AVYHDDLLRDP
Trigger: AGGATCCCGGAGCAGATCATCGTGGTAGACAGCTCAATGGTGGAGAATGAGGTCATCAAAAGCTTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000567843.1
CDS TCA 72 bp AGCTGCAGGTGTTTTCCTGGGGGTTTATCAGCTTGGTaGACGTATCAGGGAGGCAGGAGGTTCCCATTGTTA +
Preference number: 6 (lower is better)
Translates to: SCRCFPGGLSAW*TYQGGRRFPLL
Trigger: TAACAATGGGAACCTCCTGCCTCCCTGATACGTTCACCAAGCTGATAAACCCCCAGGAAAACACCTGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000562609.2
CDS TCA 72 bp TCAAGATGTAAAGTGAAGGGCACAGAGGCCGAGGACTaGGGTTCGAGAACTGTAAAGTCCAGTGCTCTGACG +
Preference number: 6 (lower is better)
Translates to: SRCKVKGTEAED*GSRTVKSSALT
Trigger: CGTCAGAGCACTGGACTTTACAGTTCTCGAACCTCAGTCCTCGGCCTCTGTGCCCTTCACTTTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp TTTGGTTTCAATGGGAACAGCCATTCCAGGTTGTTCTaGAGCCAAAGCAGGGAGTCCCCTAGGGGAATCACT +
Preference number: 6 (lower is better)
Translates to: FGFNGNSHSRLF*SQSRESPRGIT
Trigger: AGTGATTCCCCTAGGGGACTCCCTGCTTTGGCTGCAGAACAACCTGGAATGGCTGTTCCCATTGAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567806.1
CDS CCA 72 bp CCTCTGACTACAGCTGACTGGGACACAACAGCTGACTaGATTTCTCTTGGCCACTGTGATTCTCCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: PLTTADWDTTAD*ISLGHCDSPAQ
Trigger: TTGAGCAGGAGAATCACAGTGGCCAAGAGAAATCCAGTCAGCTGTTGTGTCCCAGTCAGCTGTAGTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS CAA 72 bp CCTGTTGCACAACTGCAGCTTTTACGAATGAAGGATTaGGGGTCAGCCAAGCCTGACCTCAGTCAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: PVAQLQLLRMKD*GSAKPDLSQVC
Trigger: ACAGACCTGACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGCTGCAGTTGTGCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp TCTGAACTTCCGTCCTTCATAGGTAACCGAGAACACTaGGTCCCAAACTGTCTCTCACAGGGGTTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: SELPSFIGNREH*VPNCLSQGFVQ
Trigger: CTGGACAAACCCCTGTGAGAGACAGTTTGGGACTCAGTGTTCTCGGTTACCTATGAAGGACGGAAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp ACACAGGTTACAGCGGCACTGCCCTCGCCTGCTTGTTaGTTTATTCTTCAAGCATTTATGGAATGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: TQVTAALPSPAC*FILQAFMECPL
Trigger: GAGGGGGCATTCCATAAATGCTTGAAGAATAAATCAACAAGCAGGCGAGGGCAGTGCCGCTGTAACCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564747.1
CDS GCA 72 bp TCTGCAAACACGCAGGAAATGTACTTGGTGGTTCGCTaGCGACCTTCGTCTTCCATGAATCCCTTGACAACT +
Preference number: 6 (lower is better)
Translates to: SANTQEMYLVVR*RPSSSMNPLTT
Trigger: AGTTGTCAAGGGATTCATGGAAGACGAAGGTCGGCAGCGAACCACCAAGTACATTTCCTGCGTGTTTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS GCA 72 bp CAGAAATGTCTGGAGCCTCACTGTGAGTCCATTCTCTaGGGCAGTGTTCTCCTTTTTGGCCTGGTTGATGAT +
Preference number: 6 (lower is better)
Translates to: QKCLEPHCESIL*GSVLLFGLVDD
Trigger: ATCATCAACCAGGCCAAAAAGGAGAACACTGCCGCAGAGAATGGACTCACAGTGAGGCTCCAGACATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000564664.5
CDS CCA 72 bp GTCCCTTTCTTTGTCTTACAAGGTCCACATTCAGGGTaGATCTCTTGCAAGCGAAGAGACACCACCTTGGCT +
Preference number: 6 (lower is better)
Translates to: VPFFVLQGPHSG*ISCKRRDTTLA
Trigger: AGCCAAGGTGGTGTCTCTTCGCTTGCAAGAGATCCACCCTGAATGTGGACCTTGTAAGACAAAGAAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CTCGGCCAGGCACACTTTATAGTTGAGATAGGCCTGTaGGTTTTTGACTATGTAGCGAGCTCTTCGTCCAAC +
Preference number: 6 (lower is better)
Translates to: LGQAHFIVEIGL*VFDYVASSSSN
Trigger: GTTGGACGAAGAGCTCGCTACATAGTCAAAAACCCACAGGCCTATCTCAACTATAAAGTGTGCCTGGCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000566779.1
ENST00000568569.1
CDS CCA 72 bp ACCATCCCAGAAACGGCTTACCTGGCGAACAGCTCCTaGAGTGTGTCTGGGATTTCAAGGTTAGAATTCCTT +
Preference number: 6 (lower is better)
Translates to: TIPETAYLANSS*SVSGISRLEFL
Trigger: AAGGAATTCTAACCTTGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAGGTAAGCCGTTTCTGGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS TCA 72 bp TGTCTCTCACAGGGGTTTGTCCAGGACCATATGGGCTaGCTTATAGTTGAGATAGGCCTGTGGGTTTTTGAC +
Preference number: 6 (lower is better)
Translates to: CLSQGFVQDHMG*LIVEIGLWVFD
Trigger: GTCAAAAACCCACAGGCCTATCTCAACTATAAGTCAGCCCATATGGTCCTGGACAAACCCCTGTGAGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp GCTTTTACGAATGAAGGATTTGGGGTCAGCCAAGCCTaGCCTCAGTCAGGTCTGTTCACACTTTACACCTTG +
Preference number: 6 (lower is better)
Translates to: AFTNEGFGVSQA*PQSGLFTLYTL
Trigger: CAAGGTGTAAAGTGTGAACAGACCTGACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp CTTATATGCCTGTTGCACAACTGCAGCTTTTACGAATaGAGGATTTGGGGTCAGCCAAGCCTGACCTCAGTC +
Preference number: 6 (lower is better)
Translates to: LICLLHNCSFYE*RIWGQPSLTSV
Trigger: GACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGCTGCAGTTGTGCAACAGGCATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CCA 72 bp GAGTGTTGCTGGGCTCCAGTGGGTAATCGGATCACATaGGACTGCATTGTAATCAGCCCGTTTTTGTTCAAA +
Preference number: 6 (lower is better)
Translates to: ECCWAPVGNRIT*DCIVISPFLFK
Trigger: TTTGAACAAAAACGGGCTGATTACAATGCAGTCCCATGTGATCCGATTACCCACTGGAGCCCAGCAACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp GTCTTGGAGATGACCTCCTCGTCCTCGTCATCATCATaGTCATTCCGTTTAAATTCCTTCAGCAGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: VLEMTSSSSSSS*SFRLNSFSSLR
Trigger: CCTCAAGCTGCTGAAGGAATTTAAACGGAATGACCATGATGATGACGAGGACGAGGAGGTCATCTCCAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp AGTTTTCCCACATTCATAGCCACTCGGATTTCAGCTTaGGAAATTCCTTTCGTGCCTCTGCGCTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: SFPTFIATRISA*EIPFVPLRSMR
Trigger: CCTCATTGAGCGCAGAGGCACGAAAGGAATTTCCCAAGCTGAAATCCGAGTGGCTATGAATGTGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CCA 72 bp CCAATTGCCAAAACTCGGTACCTGGCGAACAGCTCCTaGAGTGTGTCTGGGATTTCAAGGTTAGAATTCCTT +
Preference number: 6 (lower is better)
Translates to: PIAKTRYLANSS*SVSGISRLEFL
Trigger: AAGGAATTCTAACCTTGAAATCCCAGACACACTCCAGGAGCTGTTCGCCAGGTACCGAGTTTTGGCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp TCCTCGTCATCATCATGGTCATTCCGTTTAAATTCCTTCAGCAGCTaGAGGCACCGAACCATGACGTCGGTCCCTTTCTTTGTCTTACAA +
Preference number: 6 (lower is better)
Translates to: SSSSSWSFRLNSFSS*RHRTMTSVPFFVLQ
Trigger: TTGTAAGACAAAGAAAGGGACCGACGTCATGGTTCGGTGCCTCAAGCTGCTGAAGGAATTTAAACGGAATGACCATGATGATGACGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 90 bp ACTTATATGCCTGTTGCACAACTGCAGCTTTTACGAATGAAGGATTaGGGGTCAGCCAAGCCTGACCTCAGTCAGGTCTGTTCACACTTT +
Preference number: 6 (lower is better)
Translates to: TYMPVAQLQLLRMKD*GSAKPDLSQVCSHF
Trigger: AAAGTGTGAACAGACCTGACTGAGGTCAGGCTTGGCTGACCCCAAATCCTTCATTCGTAAAAGCTGCAGTTGTGCAACAGGCATATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CAA 90 bp AACCTTCAGAGAGCTCCATTCTCATGTTTCTGGCCTTGGCCGACCTaGAAGCATGAGTTACTTATATGCCTGTTGCACAACTGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: NLQRAPFSCFWPWPT*KHELLICLLHNCSF
Trigger: AAAGCTGCAGTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp GAGCTCCATTCTCATGTTTCTGGCCTTGGCCGACCTTaGAGCATGAGTTACTTATATGCCTGTTGCACAACT +
Preference number: 6 (lower is better)
Translates to: ELHSHVSGLGRP*SMSYLYACCTT
Trigger: AGTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CCA 72 bp AACCTTCAGAGAGCTCCATTCTCATGTTTCTGGCCTTaGCCGACCTTGAAGCATGAGTTACTTATATGCCTG +
Preference number: 6 (lower is better)
Translates to: NLQRAPFSCFWP*PTLKHELLICL
Trigger: CAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CAA 72 bp AAGGCTTCCACCATTGTACAGCGAGGCTGCAAGGACTaGGTTCTGATGTCATTGGTAATGTTTTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: KASTIVQRGCKD*VLMSLVMFFLS
Trigger: GGAGAGGAAAAACATTACCAATGACATCAGAACCAAGTCCTTGCAGCCTCGCTGTACAATGGTGGAAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp TCATCATGGTCATTCCGTTTAAATTCCTTCAGCAGCTaGAGGCACCGAACCATGACGTCGGTCCCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSWSFRLNSFSS*RHRTMTSVPFF
Trigger: AAAGAAAGGGACCGACGTCATGGTTCGGTGCCTCAAGCTGCTGAAGGAATTTAAACGGAATGACCATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS CAA 72 bp AGAGCTCCATTCTCATGTTTCTGGCCTTGGCCGACCTaGAAGCATGAGTTACTTATATGCCTGTTGCACAAC +
Preference number: 6 (lower is better)
Translates to: RAPFSCFWPWPT*KHELLICLLHN
Trigger: GTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS TCA 72 bp ATGTTCAAATCCTGGCCCTGGTACTTACAAGCACTGTaGCCTTGGGCACGTTACTTACATAGGAATTTCCTC +
Preference number: 6 (lower is better)
Translates to: MFKSWPWYLQAL*PWARYLHRNFL
Trigger: GAGGAAATTCCTATGTAAGTAACGTGCCCAAGGTCACAGTGCTTGTAAGTACCAGGGCCAGGATTTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566779.1
CDS TCA 72 bp ATTCTCATGTTTCTGGCCTTGGCCGACCTTGAAGCATaGGTTACTTATATGCCTGTTGCACAACTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: ILMFLALADLEA*VTYMPVAQLQL
Trigger: AAGCTGCAGTTGTGCAACAGGCATATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CCA 72 bp GTTCAGAACCTTCAGAGAGCTCCATTCTCATGTTTCTaGCCTTGGCCGACCTTGAAGCATGAGTTACTTATA +
Preference number: 6 (lower is better)
Translates to: VQNLQRAPFSCF*PWPTLKHELLI
Trigger: TATAAGTAACTCATGCTTCAAGGTCGGCCAAGGCCAGAAACATGAGAATGGAGCTCTCTGAAGGTTCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570129.1
CDS CAA 90 bp CAAGAGAGTCTACGGGCACCACTTTCACAACACCGTGTGCTCGATTaGTGTCTGTCACGCTTGGGAATTCTCAGAATATTTCAACTTTTT +
Preference number: 6 (lower is better)
Translates to: QESLRAPLSQHRVLD*CLSRLGILRIFQLF
Trigger: AAAAAGTTGAAATATTCTGAGAATTCCCAAGCGTGACAGACACAAATCGAGCACACGGTGTTGTGAAAGTGGTGCCCGTAGACTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562609.2
CDS GCA 72 bp TGCTGGGCTCCAGTGGGTAATCGGATCACATGGGACTaGATTGTAATCAGCCCGTTTTTGTTCAAAATTTTT +
Preference number: 6 (lower is better)
Translates to: CWAPVGNRITWD*IVISPFLFKIF
Trigger: AAAAATTTTGAACAAAAACGGGCTGATTACAATGCAGTCCCATGTGATCCGATTACCCACTGGAGCCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5
CDS TCA 72 bp CACACTTTGGGTCATCATAGTCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTTTATCCTGGTACACCT +
Preference number: 6 (lower is better)
Translates to: HTLGHHSHLFDS*NLQQVLYPGTP
Trigger: AGGTGTACCAGGATAAAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTGACTATGATGACCCAAAGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568569.1
CDS TCA 72 bp AAACCTTTGGGTCATCATAGTCACCTCTTCGATTCATaGAATCTCCAACAAGTGCTTTATCCTGGTACACCT +
Preference number: 6 (lower is better)
Translates to: KPLGHHSHLFDS*NLQQVLYPGTP
Trigger: AGGTGTACCAGGATAAAGCACTTGTTGGAGATTTCATGAATCGAAGAGGTGACTATGATGACCCAAAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356183.9
ENST00000561623.5
ENST00000566779.1
CDS TCA 72 bp TCGTCTTCCATGAATCCCTTGACAACTTTGAATCTTTaGAGAAGTCGGCACAGCATTCTTGCTTCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: SSSMNPLTTLNL*RSRHSILASSF
Trigger: AAAACTAGAAGCAAGAATGCTGTGCCGACTTCTTCAAAGATTCAAAGTTGTCAAGGGATTCATGGAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356183.9
ENST00000561623.5