Pregenerated sensors for GTF2IRD2B (Homo sapiens)
Ensembl gene IDs: ENSG00000174428Ensembl transcript IDs: ENST00000418185.6, ENST00000611835.4, ENST00000619142.4, ENST00000651028.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAATTTCAGGGTGGGAAAGTGGGCCAGATTATTCCTCGTCAAATaGGTCTCCCAGAGGCACAGTTTTGCTAGGAACGCCCGGATCAGG | + |
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Preference number: 1 (lower is better) Translates to: TNFRVGKWARLFLVK*VSQRHSFARNARIR Trigger: CCTGATCCGGGCGTTCCTAGCAAAACTGTGCCTCTGGGAGACTCATTTGACGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 90 bp | CAGAGGCACAGTTTTGCTAGGAACGCCCGGATCAGGTCATACATCTaGGTGACGATTTGGGAGTGTCCTTGGAGAGAGATGTTCAAAGCG | + |
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Preference number: 1 (lower is better) Translates to: QRHSFARNARIRSYI*VTIWECPWREMFKA Trigger: CGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGCGTTCCTAGCAAAACTGTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 90 bp | TCAACCAAGAAGGCCAGGTCTCGGATCCAATCTATGGAGCTCAGTTaGGGCAGGGGTTTCCCTCTGGATGACATGAAGGAGTCGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: STKKARSRIQSMELS*GRGFPLDDMKESIS Trigger: AGAAATCGACTCCTTCATGTCATCCAGAGGGAAACCCCTGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 90 bp | GGCACAGTTTTGCTAGGAACGCCCGGATCAGGTCATACATCTGCGTaGCGATTTGGGAGTGTCCTTGGAGAGAGATGTTCAAAGCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: GTVLLGTPGSGHTSA*RFGSVLGERCSKRS Trigger: TGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGCGTTCCTAGCAAAACTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 90 bp | ACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTaGTCGGGACACTCGGTGTCTGACGAGCCTAAGAGATACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TGDFWVGLGFANTCF*SGHSVSDEPKRYFL Trigger: CAGGAAGTATCTCTTAGGCTCGTCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 90 bp | TCACGTAACTTCTCCCATAAGTTCCCAGCTAGGTCCTCTACAGGCTaGACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGT | + |
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Preference number: 1 (lower is better) Translates to: SRNFSHKFPARSSTG*TGDFWVGLGFANTC Trigger: ACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGAACTTATGGGAGAAGTTACGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 90 bp | GCCCGGATCAGGTCATACATCTGCGTGACGATTTGGGAGTGTCCTTaGAGAGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACC | + |
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Preference number: 1 (lower is better) Translates to: ARIRSYICVTIWECP*REMFKAFRCIVMST Trigger: GGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 90 bp | ACGATTTGGGAGTGTCCTTGGAGAGAGATGTTCAAAGCGTTCAGATaGATCGTCATGTCAACCAAGAAGGCCAGGTCTCGGATCCAATCT | + |
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Preference number: 1 (lower is better) Translates to: TIWECPWREMFKAFR*IVMSTKKARSRIQS Trigger: AGATTGGATCCGAGACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 90 bp | TACCACGTCCATGACGTGGTCCATCTTCAACTTCTGAGCACAGAGTaGTTCCGGATGAATTATACAACAGATGGACTTCAGTTCCGCACC | + |
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Preference number: 1 (lower is better) Translates to: YHVHDVVHLQLLSTE*FRMNYTTDGLQFRT Trigger: GGTGCGGAACTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACTCTGTGCTCAGAAGTTGAAGATGGACCACGTCATGGACGTGGTA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 90 bp | GTTCCGCGATTTTGGGAATGTAGTTCAGGCCATCGCTTTCATTTCTaGAAACCAATTTCAGGGTGGGAAAGTGGGCCAGATTATTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: VPRFWECSSGHRFHF*KPISGWESGPDYSS Trigger: CGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGTTTCCAGAAATGAAAGCGATGGCCTGAACTACATTCCCAAAATCGCGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 90 bp | AATCTATGGAGCTCAGTTGAGGCAGGGGTTTCCCTCTGGATGACATaGAGGAGTCGATTTCTTCCAAGGATTCGAAAAATCTCTTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: NLWSSVEAGVSLWMT*RSRFLPRIRKISLA Trigger: TGCTAAAGAGATTTTTCGAATCCTTGGAAGAAATCGACTCCTTCATGTCATCCAGAGGGAAACCCCTGCCTCAACTGAGCTCCATAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 90 bp | ATATTCTTTGGACACAGACATGCTTTGTTTGCATATGAGACATGTTaGAATATTCTGTACTTCCACGAAGAAATACGCTCTCTCCCACTT | + |
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Preference number: 1 (lower is better) Translates to: IFFGHRHALFAYETC*NILYFHEEIRSLPL Trigger: AAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 90 bp | GTCTTAGGTTATATTCTTTGGACACAGACATGCTTTGTTTGCATATaGGACATGTTGGAATATTCTGTACTTCCACGAAGAAATACGCTC | + |
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Preference number: 1 (lower is better) Translates to: VLGYILWTQTCFVCI*DMLEYSVLPRRNTL Trigger: GAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATATAACCTAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 90 bp | CAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATaGGCATCCACCATCGCTGGGGTGCCAGTGGAGGCCACGCTTACT | + |
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Preference number: 2 (lower is better) Translates to: QNVATLDFSFVTSPL*ASTIAGVPVEATLT Trigger: AGTAAGCGTGGCCTCCACTGGCACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 90 bp | GGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTTaGCAAACACTTGTTTTTGCTCGGGACACTCGGTGTCTGACGAGC | + |
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Preference number: 2 (lower is better) Translates to: GPLQAARGISGLDLG*QTLVFARDTRCLTS Trigger: GCTCGTCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 90 bp | CAGCTAGGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTaGGGTTTGCAAACACTTGTTTTTGCTCGGGACACTCGGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QLGPLQAARGISGLD*GLQTLVFARDTRCL Trigger: CAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 90 bp | AGTTCCCAGCTAGGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTaGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGGACACTCGG | + |
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Preference number: 2 (lower is better) Translates to: SSQLGPLQAARGISG*DLGLQTLVFARDTR Trigger: CCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCCTAATCTCGACCAGTTaGTACAGAACTTTTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FRTLAERRHPGLQFCDKPLISTS*YRTFSG Trigger: GCCTGAAAAAGTTCTGTATCAACTGGTCGAGATTAG...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCTAGGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTTTCCTTCTCATTATCTaGAACAGTCACTTGAACGAT | + |
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Preference number: 2 (lower is better) Translates to: SQLGPLQAARGISGLDLGFLLII*NSHLND Trigger: ATCGTTCAAGTGACTGTTCCAGATAATGAGAAGGAA...ACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCAATGCTTGCTGTGATTaGTTTGATAGTGGCGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FRTLAERRHPGLQFCDKPNACCD*FDSGVL Trigger: TAAGACGCCACTATCAAACCAATCACAGCAAGCATT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCAAAGGGACCAGCGGAGTaGAATCTTCCATTGGTAATT | + |
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Preference number: 2 (lower is better) Translates to: LQNVATLDFSFVTSPLLAKGPAE*NLPLVI Trigger: AATTACCAATGGAAGATTCCACTCCGCTGGTCCCTT...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCAGAAATCCACGCCAATTaGTTCACCAAATTTTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQNVATLDFSFVTSPLLAEIHAN*FTKFSA Trigger: AGCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTC...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACCAAGAAGGCCAGGTCGGTTGGACTTGGGTTTaGAAACACTTGTTTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RDVQSVQMHRHVNQEGQVGWTWV*KHLFLL Trigger: GAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACC...GACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACCAAGAAGGCCAGGTCACTGGTCATAATGCTTaGTGTGATTGGTTTGATAGT | + |
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Preference number: 2 (lower is better) Translates to: RDVQSVQMHRHVNQEGQVTGHNA*CDWFDS Trigger: ACTATCAAACCAATCACAGCAAGCATTATGACCAGT...GACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACCAAGAAGGCCAGGTCGATTGCGATAGAATATaGCACAAAAGACCTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: RDVQSVQMHRHVNQEGQVDCDRI*HKRPDF Trigger: AAAATCAGGTCTTTTGTGGCATATTCTATCGCAATC...GACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CCA 90 bp | TATTCTTTGGACACAGACATGCTTTGTTTGCATATGAGACATGTTGGAATATTCCTTGTGGAAGAAGGGTaGCTTCCTTGCATATTATAT | + |
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Preference number: 2 (lower is better) Translates to: YSLDTDMLCLHMRHVGIFLVEEG*LPCILY Trigger: ATATAATATGCAAGGAAGCCACCCTTCTTCCACAAG...GAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCTCTCTCCCACTTTTCTaGAAACACACGGCCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: FRTLAERRHPGLQFCDKPSLPLF*KHTALL Trigger: CAGGAGGGCCGTGTGTTTCAAGAAAAGTGGGAGAGA...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 72 bp | AAGGCCAGGTCTCGGATCCAATCTATGGAGCTCAGTTaGGGCAGGGGTTTCCCTCTGGATGACATGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: KARSRIQSMELS*GRGFPLDDMKE Trigger: CTCCTTCATGTCATCCAGAGGGAAACCCCTGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 72 bp | AGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTTTaGAAACACTTGTTTTTGCTCGGGACACTCGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RLHGGFLGWTWV*KHLFLLGTLGV Trigger: GACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | TGTCAACCAAGAAGGCCAGGTCTCGGATCCAATCTATaGAGCTCAGTTGAGGCAGGGGTTTCCCTCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: CQPRRPGLGSNL*SSVEAGVSLWM Trigger: CATCCAGAGGGAAACCCCTGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | CTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTaGGTTTGCAAACACTTGTTTTTGCTCGGGACACTC | + |
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Preference number: 3 (lower is better) Translates to: LYRLHGGFLGWT*VCKHLFLLGTL Trigger: GAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCACGGGGGATTTCTGGGTaGGACTTGGGTTTGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: LQNVATLDFSFVTSPLLARGISG*DLGLQT Trigger: TGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCG...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCATTTCTGGGTTGGACTaGGGTTTGCAAACACTTGTT | + |
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Preference number: 3 (lower is better) Translates to: FRTLAERRHPGLQFCDKPISGLD*GLQTLV Trigger: AACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAAT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 72 bp | TTGCTAGGAACGCCCGGATCAGGTCATACATCTGCGTaGCGATTTGGGAGTGTCCTTGGAGAGAGATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LLGTPGSGHTSA*RFGSVLGERCS Trigger: TGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGCGTTCCTAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 72 bp | AGTTTTGCTAGGAACGCCCGGATCAGGTCATACATCTaGGTGACGATTTGGGAGTGTCCTTGGAGAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: SFARNARIRSYI*VTIWECPWREM Trigger: CATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGCGTTCCTAGCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGGGAAATCCACGCCAATaGCTTCACCAAATTTTCGGC | + |
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Preference number: 3 (lower is better) Translates to: ARGISGLDLGLQTLVFARGNPRQ*LHQIFG Trigger: GCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTCC...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCACAGACATGCTTTGTTaGCATATGAGACATGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: FRTLAERRHPGLQFCDKPTDMLC*HMRHVG Trigger: TCCAACATGTCTCATATGCAAACAAAGCATGTCTGT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCACTAATCTCGACCAGTaGATACAGAACTTTTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: FRTLAERRHPGLQFCDKPTNLDQ*IQNFFR Trigger: CCTGAAAAAGTTCTGTATCAACTGGTCGAGATTAGT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 72 bp | TATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTaGTCCTCCTGCTTTAGCCTGCCAAGTAGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: YGSLLSQTPEFK*SSCFSLPSSWG Trigger: GCCCCAGCTACTTGGCAGGCTAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| 3UTR GCA 72 bp | TTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTaGTCGGGACACTCGGTGTCTGACGAGCCTAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: FWVGLGFANTCF*SGHSVSDEPKR Trigger: TCTCTTAGGCTCGTCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCAGAAGGGTGGCTTCCTaGCATATTATATTGATAGTA | + |
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Preference number: 3 (lower is better) Translates to: FRTLAERRHPGLQFCDKPRRVAS*HIILIV Trigger: TACTATCAATATAATATGCAAGGAAGCCACCCTTCT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | AGGTCATACATCTGCGTGACGATTTGGGAGTGTCCTTaGAGAGAGATGTTCAAAGCGTTCAGATGCATCGTC | + |
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Preference number: 3 (lower is better) Translates to: RSYICVTIWECP*REMFKAFRCIV Trigger: GACGATGCATCTGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCAGGACACAGACATGCTTaGTTTGCATATGAGACATGT | + |
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Preference number: 3 (lower is better) Translates to: LQNVATLDFSFVTSPLLAGHRHA*FAYETC Trigger: ACATGTCTCATATGCAAACAAAGCATGTCTGTGTCC...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | GGCCATCGCTTTCATTTCTGGAAACCAATTTCAGGGTaGGAAAGTGGGCCAGATTATTCCTCGTCAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: GHRFHFWKPISG*ESGPDYSSSNE Trigger: CTCATTTGACGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGTTTCCAGAAATGAAAGCGATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR-3UTR CAA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGCTTAGGTTATATTCTTaGGACACAGACATGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: ARGISGLDLGLQTLVFARLRLYS*DTDMLC Trigger: ACAAAGCATGTCTGTGTCCAAAGAATATAACCTAAG...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | TTTTGGGAATGTAGTTCAGGCCATCGCTTTCATTTCTaGAAACCAATTTCAGGGTGGGAAAGTGGGCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: FWECSSGHRFHF*KPISGWESGPD Trigger: ATCTGGCCCACTTTCCCACCCTGAAATTGGTTTCCAGAAATGAAAGCGATGGCCTGAACTACATTCCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | CTCCATCACGTTGCGATGTGGAGTACAGAATCCCACTaGGAATCCTTTAACTGGGAGCAGTATTTTGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LHHVAMWSTESH*ESFNWEQYFVL Trigger: CAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCAGTGGGATTCTGTACTCCACATCGCAACGTGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR TCA 72 bp | CATGACGTGGTCCATCTTCAACTTCTGAGCACAGAGTaGTTCCGGATGAATTATACAACAGATGGACTTCAG | + |
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Preference number: 3 (lower is better) Translates to: HDVVHLQLLSTE*FRMNYTTDGLQ Trigger: CTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACTCTGTGCTCAGAAGTTGAAGATGGACCACGTCATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR GCA 72 bp | CGTCACGCATTCTTTCCGTATACTGGTCATAATGCTTaGTGTGATTGGTTTGATAGTGGCGTCTTAGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RHAFFPYTGHNA*CDWFDSGVLGY Trigger: ATAACCTAAGACGCCACTATCAAACCAATCACAGCAAGCATTATGACCAGTATACGGAAAGAATGCGTGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| 3UTR CCA 72 bp | AAATTCTCATCGACACCACGGATGAATATGGCCAACTaGGTGGTATTATTTATATCCGTGATCTCATCGATT | + |
|
Preference number: 3 (lower is better) Translates to: KFSSTPRMNMAN*VVLFISVISSI Trigger: AATCGATGAGATCACGGATATAAATAATACCACCCAGTTGGCCATATTCATCCGTGGTGTCGATGAGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CCA 72 bp | ATGTGGAGTACAGAATCCCACTGGGAATCCTTTAACTaGGAGCAGTATTTTGTTTTGCTCAGTTTCATAATG | + |
|
Preference number: 3 (lower is better) Translates to: MWSTESHWESFN*EQYFVLLSFIM Trigger: CATTATGAAACTGAGCAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCAGTGGGATTCTGTACTCCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 72 bp | GCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATaGGCATCCACCATCGCTGGGGTGCCAGTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATLDFSFVTSPL*ASTIAGVPVEA Trigger: GGCCTCCACTGGCACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCTTCAGGGTGGGAAAGTaGGCCAGATTATTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRTLAERRHPGLQFCDKPFRVGK*ARLFLV Trigger: GACGAGGAATAATCTGGCCCACTTTCCCACCCTGAA...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 72 bp | CCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTaGGGTTTGCAAACACTTGTTTTTGCTCGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PLQAARGISGLD*GLQTLVFARDT Trigger: AGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGCTCGGATCCAATCTATaGAGCTCAGTTGAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGISGLDLGLQTLVFARLGSNL*SSVEAG Trigger: CCCTGCCTCAACTGAGCTCCATAGATTGGATCCGAG...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCATTTGGGAGTGTCCTTaGAGAGAGATGTTCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FRTLAERRHPGLQFCDKPIWECP*REMFKA Trigger: CGCTTTGAACATCTCTCTCCAAGGACACTCCCAAAT...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTAGGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTAAACCAATTTCAGGGTaGGAAAGTGGGCCAGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLQAARGISGLDLGKPISG*ESGPDY Trigger: ATAATCTGGCCCACTTTCCCACCCTGAAATTGGTTT...ACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTAGGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTCATCGCTTTCATTTCTaGAAACCAATTTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLQAARGISGLDLGHRFHF*KPISGW Trigger: CCACCCTGAAATTGGTTTCCAGAAATGAAAGCGATG...ACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | TTCCGCACCCTTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCTCAGACAGCCTTTTCTaGAATTCGGTCTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRTLAERRHPGLQFCDKPSDSLF*NSVLSS Trigger: GGAACTCAAGACCGAATTCCAGAAAAGGCTGTCTGA...GGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCAGGGGGATTTCTGGGTTaGACTTGGGTTTGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQNVATLDFSFVTSPLLAGGFLG*TWVCKH Trigger: GTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCC...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | ACATGTTGGAATATTCTGTACTTCCACGAAGAAATACGCTCTCTCCCACTTTTCGGCATCCACCATCGCTaGGGTGCCAGTGGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCWNILYFHEEIRSLPLFGIHHR*GASGGH Trigger: GTGGCCTCCACTGGCACCCCAGCGATGGTGGATGCC...GAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| 3UTR CAA 72 bp | ATTCCCACCTTGTCGTATTTCGTCTTCAGGACCGTGTaGCATTGCAGGTCGATAACCTCCATCTGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPTLSYFVFRTV*HCRSITSIWSS Trigger: GGAGCTCCAGATGGAGGTTATCGACCTGCAATGCAACACGGTCCTGAAGACGAAATACGACAAGGTGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGCCAGTTCTTTACACATaGATTCGAGGGCAGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: ARGISGLDLGLQTLVFARPVLYT*IRGQTR Trigger: TCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGG...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| 3UTR CAA 72 bp | GTGCCAGTGGAGGCCACGCTTACTAATCTCGACCAGTaGATACAGAACTTTTTCAGGCTCTTCTCAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVEATLTNLDQ*IQNFFRLFSTR Trigger: GCGTGTTGAGAAGAGCCTGAAAAAGTTCTGTATCAACTGGTCGAGATTAGTAAGCGTGGCCTCCACTGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR TCA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGCTAATCTCGACCAGTTaGTACAGAACTTTTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGISGLDLGLQTLVFARLISTS*YRTFSG Trigger: GCCTGAAAAAGTTCTGTATCAACTGGTCGAGATTAG...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | ATTATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTGATCCTCCTGCTTTACCTTGTTGCCCAGGCTaGTCTGAAACCCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IMVLCCLKLLSLSDPPALPCCPG*SETPGS Trigger: TGAGCCTGGGGTTTCAGACCAGCCTGGGCAACAAGG...TAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| CDS-3UTR CCA 90 bp | AGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACCAAGAAGGCCAGGTCAAGGGACCAGCGGAGTaGAATCTTCCATTGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RDVQSVQMHRHVNQEGQVKGPAE*NLPLVI Trigger: AATTACCAATGGAAGATTCCACTCCGCTGGTCCCTT...GACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
||
| CDS-3UTR CCA 90 bp | GCACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTGCTCGGTTCCTTCTCATTATCTaGAACAGTCACTTGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARGISGLDLGLQTLVFARFLLII*NSHLND Trigger: ATCGTTCAAGTGACTGTTCCAGATAATGAGAAGGAA...CCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | AGAGATGTTCAAAGCGTTCAGATGCATCGTCATGTCAACCAAGAAGGCCAGGTCCTTGTGGAAGAAGGGTaGCTTCCTTGCATATTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RDVQSVQMHRHVNQEGQVLVEEG*LPCILY Trigger: ATATAATATGCAAGGAAGCCACCCTTCTTCCACAAG...GACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCTTTGAACATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | TTGCAGAACGTCGCCACCCTGGACTTCAGTTTTGTGACAAGCCCGTTATTGGCAATGAATATGGCCAACTaGGTGGTATTATTTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LQNVATLDFSFVTSPLLAMNMAN*VVLFIS Trigger: GGATATAAATAATACCACCCAGTTGGCCATATTCAT...TGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | ATTATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTGATCCTCCTGCTTTACCAGTTCTTTACACATaGATTCGAGGGCAGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: IMVLCCLKLLSLSDPPALPVLYT*IRGQTR Trigger: TCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGG...TAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| CDS-3UTR CCA 90 bp | ACATGTTGGAATATTCTGTACTTCCACGAAGAAATACGCTCTCTCCCACTTTTCACTCATTTTGTCAGCTaGGCACAGTGGTTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCWNILYFHEEIRSLPLFTHFVS*AQWFMP Trigger: AGGCATGAACCACTGTGCCCAGCTGACAAAATGAGT...GAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| 3UTR CAA 72 bp | CACTGGGAATCCTTTAACTGGGAGCAGTATTTTGTTTaGCTCAGTTTCATAATGGAGAACAGCTGTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWESFNWEQYFV*LSFIMENSCSQ Trigger: CTGCGAACAGCTGTTCTCCATTATGAAACTGAGCAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | ATTATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTGATCCTCCTGCTTTAAAGGGACCAGCGGAGTaGAATCTTCCATTGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IMVLCCLKLLSLSDPPALKGPAE*NLPLVI Trigger: AATTACCAATGGAAGATTCCACTCCGCTGGTCCCTT...TAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| CDS-3UTR CCA 90 bp | ATTATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTGATCCTCCTGCTTTACTTGTGGAAGAAGGGTaGCTTCCTTGCATATTATAT | + |
|
Preference number: 4 (lower is better) Translates to: IMVLCCLKLLSLSDPPALLVEEG*LPCILY Trigger: ATATAATATGCAAGGAAGCCACCCTTCTTCCACAAG...TAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| CDS-3UTR TCA 90 bp | TATTCTTTGGACACAGACATGCTTTGTTTGCATATGAGACATGTTGGAATATTCAGCTTCTGCTTTCAGTaGAATGCCTTTCACTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLDTDMLCLHMRHVGIFSFCFQ*NAFHLV Trigger: CACCAAGTGAAAGGCATTTCACTGAAAGCAGAAGCT...GAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | ACATGTTGGAATATTCTGTACTTCCACGAAGAAATACGCTCTCTCCCACTTTTCTGGGAATCCTTTAACTaGGAGCAGTATTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCWNILYFHEEIRSLPLFWESFN*EQYFVL Trigger: CAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCA...GAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | TATTCTTTGGACACAGACATGCTTTGTTTGCATATGAGACATGTTGGAATATTCAGTACAGAATCCCACTaGGAATCCTTTAACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSLDTDMLCLHMRHVGIFSTESH*ESFNWE Trigger: CTCCCAGTTAAAGGATTCCCAGTGGGATTCTGTACT...GAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS-3UTR CCA 90 bp | ATTATGGTTCTCTGCTGTCTCAAACTCCTGAGTTTAAGTGATCCTCCTGCTTTAGTAGTATTGCAATTATaGTTCTCTGCTGTCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IMVLCCLKLLSLSDPPALVVLQL*FSAVSN Trigger: GTTTGAGACAGCAGAGAACCATAATTGCAATACTAC...TAAAGCAGGAGGATCACTTAAACTCAGGAGTTTGAGACAGCAGAGAACCATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619142.4 |
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| CDS-3UTR CCA 90 bp | TATTCTTTGGACACAGACATGCTTTGTTTGCATATGAGACATGTTGGAATATTCAATGCTTGCTGTGATTaGTTTGATAGTGGCGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSLDTDMLCLHMRHVGIFNACCD*FDSGVL Trigger: TAAGACGCCACTATCAAACCAATCACAGCAAGCATT...GAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS TCA 90 bp | AAAACACAAAGCTTGGCCCATCAATTCCAGTCCTTGGTATACACCTaGGGGCGCTGGGCCGCGCCGGGCCGGCCGCGGAGTCCGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTQSLAHQFQSLVYT*GRWAAPGRPRSPRP Trigger: AGGCCTCGGACTCCGCGGCCGGCCCGGCGCGGCCCAGCGCCCTCAGGTGTATACCAAGGACTGGAATTGATGGGCCAAGCTTTGTGTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651028.1 |
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| CDS CCA 90 bp | TCAGAGCATCCCTTGCAGAAGTCTTGGTATAGGCTCAAAGCTTTCTaGCGCAACATGTTGCTGTCAATGGGAACACGTTTTCTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SEHPLQKSWYRLKAF*RNMLLSMGTRFLFI Trigger: GATGAACAGAAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCCTATACCAAGACTTCTGCAAGGGATGCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651028.1 |
||
| CDS-3UTR CAA 90 bp | ACATGTTGGAATATTCTGTACTTCCACGAAGAAATACGCTCTCTCCCACTTTTCACTAATCTCGACCAGTaGATACAGAACTTTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCWNILYFHEEIRSLPLFTNLDQ*IQNFFR Trigger: CCTGAAAAAGTTCTGTATCAACTGGTCGAGATTAGT...GAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418185.6 |
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| CDS CAA 72 bp | TTTGTGTGGGCAGGATGGGGGTTACCGAGGAGTGTTTaGGGGCCAGAGCACGGTCGTGCGGCTGAGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FVWAGWGLPRSV*GPEHGRAAEPQ Trigger: CTGAGGCTCAGCCGCACGACCGTGCTCTGGCCCCAAAACACTCCTCGGTAACCCCCATCCTGCCCACACAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611835.4 |
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| CDS CCA 72 bp | GGCTCAAAGCTTTCTGGCGCAACATGTTGCTGTCAATaGGAACACGTTTTCTGTTCATCTCTTCCACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GSKLSGATCCCQ*EHVFCSSLPPT Trigger: TGTGGGTGGAAGAGATGAACAGAAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651028.1 |
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| CDS CAA 90 bp | TTGCAGAAGTCTTGGTATAGGCTCAAAGCTTTCTGGCGCAACATGTaGCTGTCAATGGGAACACGTTTTCTGTTCATCTCTTCCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQKSWYRLKAFWRNM*LSMGTRFLFISSTH Trigger: GTGGGTGGAAGAGATGAACAGAAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCCTATACCAAGACTTCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651028.1 |
||
| CDS CCA 72 bp | CCCTTGCAGAAGTCTTGGTATAGGCTCAAAGCTTTCTaGCGCAACATGTTGCTGTCAATGGGAACACGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLQKSWYRLKAF*RNMLLSMGTRF Trigger: AAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCCTATACCAAGACTTCTGCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651028.1 |
||
| CDS CAA 90 bp | TTACGGCTTCTCTTTGGCCTATCCAAATTCCCAGCATCACTACTCTaGTGCTTTGGGGCCATTATGACGGAAAATAAGGGTGACTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRLLFGLSKFPASLL*CFGAIMTENKGDLN Trigger: GTTCAAGTCACCCTTATTTTCCGTCATAATGGCCCCAAAGCACAAGAGTAGTGATGCTGGGAATTTGGATAGGCCAAAGAGAAGCCGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651028.1 |
||
| CDS CAA 72 bp | CTCTTTGGCCTATCCAAATTCCCAGCATCACTACTCTaGTGCTTTGGGGCCATTATGACGGAAAATAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LFGLSKFPASLL*CFGAIMTENKG Trigger: ACCCTTATTTTCCGTCATAATGGCCCCAAAGCACAAGAGTAGTGATGCTGGGAATTTGGATAGGCCAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651028.1 |
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