Pregenerated sensors for GTF2IRD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000196275Ensembl transcript IDs: ENST00000451013.7, ENST00000484624.1, ENST00000619775.1, ENST00000651129.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTTCTGAGCAGCGTGATGAAGTGTCGTGCCGTCCCGCCTGGGACGTaGCTCATCCCTTTGTCCTGCAATCCACGCTGTCTACACTACTCT | + |
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Preference number: 5 (lower is better) Translates to: VLSSVMKCRAVPPGT*LIPLSCNPRCLHYS Trigger: AGAGTAGTGTAGACAGCGTGGATTGCAGGACAAAGGGATGAGTCACGTCCCAGGCGGGACGGCACGACACTTCATCACGCTGCTCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS CCA 90 bp | ACACGTTGTTCTGAGCAGCGTGATGAAGTGTCGTGCCGTCCCGCCTaGGACGTGACTCATCCCTTTGTCCTGCAATCCACGCTGTCTACA | + |
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Preference number: 5 (lower is better) Translates to: TRCSEQRDEVSCRPA*DVTHPFVLQSTLST Trigger: TGTAGACAGCGTGGATTGCAGGACAAAGGGATGAGTCACGTCCCAGGCGGGACGGCACGACACTTCATCACGCTGCTCAGAACAACGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS TCA 90 bp | GCCAATTTCAGGGTGGGAAAGTGGGCCAGATTATTCCTCGTCAAATaGGTCTCCCAGAGGCACAGTTTTGCTAGGAACGCCCGGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: ANFRVGKWARLFLVK*VSQRHSFARNARIR Trigger: CCTGATCCGGGCGTTCCTAGCAAAACTGTGCCTCTGGGAGACTCATTTGACGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS CCA 90 bp | CTGCAGAATGTGCAGGTTTGTTTCCTAGGCACATGTGTGCCACAATaGCTTGCTGCACCTATTGGCCCATCCTCTAAGTTCCCTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LQNVQVCFLGTCVPQ*LAAPIGPSSKFPPL Trigger: GAGGGGAGGGAACTTAGAGGATGGGCCAATAGGTGCAGCAAGCCATTGTGGCACACATGTGCCTAGGAAACAAACCTGCACATTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619775.1 |
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| CDS TCA 90 bp | TTGTCCTGCAATCCACGCTGTCTACACTACTCTCCCACTAGTCACTaGGTAGCTGGCTCTGTTATCAGACTGACAGTCCTGGGAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSCNPRCLHYSPTSH*VAGSVIRLTVLGRP Trigger: TGGCCTTCCCAGGACTGTCAGTCTGATAACAGAGCCAGCTACTCAGTGACTAGTGGGAGAGTAGTGTAGACAGCGTGGATTGCAGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS TCA 90 bp | CTAGAACAGTGCCTGCATGTTGTAAGCACTAAGTTAGAGCTGCTATaGCACGAGCTCCCCCTTGATCTGTGGTTTCGCGGTCCTCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LEQCLHVVSTKLELL*HELPLDLWFRGPRF Trigger: AAACCGAGGACCGCGAAACCACAGATCAAGGGGGAGCTCGTGTCATAGCAGCTCTAACTTAGTGCTTACAACATGCAGGCACTGTTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS GCA 90 bp | ACGGGGGATTTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTaGTCGGGACACTCGGTGTCTGATGAGCCTAAGAGATACTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TGDFWVGLGFANTCF*SGHSVSDEPKRYFL Trigger: CAGGAAGTATCTCTTAGGCTCATCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS CCA 90 bp | GTTCCGCGATTTTGGGAATGTAGTTCAGGCCATCGCTTTCATTTCTaGAAGCCAATTTCAGGGTGGGAAAGTGGGCCAGATTATTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: VPRFWECSSGHRFHF*KPISGWESGPDYSS Trigger: CGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGCTTCCAGAAATGAAAGCGATGGCCTGAACTACATTCCCAAAATCGCGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS GCA 90 bp | CGGCTTCTCTTTGGCCTATCCAAATTCCCAGCATCACTACTCTTGTaGTTTGGGGCCATTATGACGGAAAATAAGGGTGACTTGAACACA | + |
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Preference number: 5 (lower is better) Translates to: RLLFGLSKFPASLLL*FGAIMTENKGDLNT Trigger: TGTGTTCAAGTCACCCTTATTTTCCGTCATAATGGCCCCAAAGCACAAGAGTAGTGATGCTGGGAATTTGGATAGGCCAAAGAGAAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 90 bp | TGCAGAAGTCTTGGTATAGGCTCAAAGCTTTCTGGCGCAACATGTTaGTGTCAATGGGAACACGTTTTCTGTTCATCTCTTCCACCCACA | + |
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Preference number: 5 (lower is better) Translates to: CRSLGIGSKLSGATC*CQWEHVFCSSLPPT Trigger: TGTGGGTGGAAGAGATGAACAGAAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCCTATACCAAGACTTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 90 bp | CTGTCAATGGGAACACGTTTTCTGTTCATCTCTTCCACCCACAAATaGAGTGCCTGTTCCATCTTAACTAAGCACTTATCACGCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSMGTRFLFISSTHK*SACSILTKHLSRTV Trigger: CACAGTGCGTGATAAGTGCTTAGTTAAGATGGAACAGGCACTGCATTTGTGGGTGGAAGAGATGAACAGAAAACGTGTTCCCATTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 90 bp | ACGATTCACTGCCCAGGCTGCACAGCGCGAGATTTCATCACAGCGTaGAATTTAAAACTTACGAATTGTTTATTTCCGGAATTTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: TIHCPGCTARDFITA*NLKLTNCLFPEFSM Trigger: CATGGAAAATTCCGGAAATAAACAATTCGTAAGTTTTAAATTGCACGCTGTGATGAAATCTCGCGCTGTGCAGCCTGGGCAGTGAATCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS TCA 72 bp | GACTATGGGTGTGGAGCGTCCACAGCGTGGGGACGCTaGACAAAGGGGACGATTCACTGCCCAGGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: DYGCGASTAWGR*TKGTIHCPGCT Trigger: TGTGCAGCCTGGGCAGTGAATCGTCCCCTTTGTTCAGCGTCCCCACGCTGTGGACGCTCCACACCCATAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS CCA 72 bp | TCTGAGCAGCGTGATGAAGTGTCGTGCCGTCCCGCCTaGGACGTGACTCATCCCTTTGTCCTGCAATCCACG | + |
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Preference number: 6 (lower is better) Translates to: SEQRDEVSCRPA*DVTHPFVLQST Trigger: CGTGGATTGCAGGACAAAGGGATGAGTCACGTCCCAGGCGGGACGGCACGACACTTCATCACGCTGCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS CAA 90 bp | GGTCCTCTACAGGCTGCACGGGGGATTTCTGGGTTGGACTTGGGTTaGCAAACACTTGTTTTTGCTCGGGACACTCGGTGTCTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPLQAARGISGLDLG*QTLVFARDTRCLMS Trigger: GCTCATCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS CAA 72 bp | AGCTCCCCCTTGATCTGTGGTTTCGCGGTCCTCGGTTaGCTCCCCAAGGTCAACCAAAGTCTGCAAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSPLICGFAVLG*LPKVNQSLQRV Trigger: TACTCTTTGCAGACTTTGGTTGACCTTGGGGAGCAAACCGAGGACCGCGAAACCACAGATCAAGGGGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS CAA 90 bp | TATGACACGAGCTCCCCCTTGATCTGTGGTTTCGCGGTCCTCGGTTaGCTCCCCAAGGTCAACCAAAGTCTGCAAAGAGTAAACGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: YDTSSPLICGFAVLG*LPKVNQSLQRVNGK Trigger: TTTTCCGTTTACTCTTTGCAGACTTTGGTTGACCTTGGGGAGCAAACCGAGGACCGCGAAACCACAGATCAAGGGGGAGCTCGTGTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS TCA 72 bp | TGCCTGCATGTTGTAAGCACTAAGTTAGAGCTGCTATaGCACGAGCTCCCCCTTGATCTGTGGTTTCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: CLHVVSTKLELL*HELPLDLWFRG Trigger: ACCGCGAAACCACAGATCAAGGGGGAGCTCGTGTCATAGCAGCTCTAACTTAGTGCTTACAACATGCAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484624.1 |
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| CDS CCA 72 bp | GTGCAGGTTTGTTTCCTAGGCACATGTGTGCCACAATaGCTTGCTGCACCTATTGGCCCATCCTCTAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VQVCFLGTCVPQ*LAAPIGPSSKF Trigger: GAACTTAGAGGATGGGCCAATAGGTGCAGCAAGCCATTGTGGCACACATGTGCCTAGGAAACAAACCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619775.1 |
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| CDS GCA 72 bp | TTCTGGGTTGGACTTGGGTTTGCAAACACTTGTTTTTaGTCGGGACACTCGGTGTCTGATGAGCCTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FWVGLGFANTCF*SGHSVSDEPKR Trigger: TCTCTTAGGCTCATCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS CCA 72 bp | GGCCATCGCTTTCATTTCTGGAAGCCAATTTCAGGGTaGGAAAGTGGGCCAGATTATTCCTCGTCAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GHRFHFWKPISG*ESGPDYSSSNE Trigger: CTCATTTGACGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGCTTCCAGAAATGAAAGCGATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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| CDS TCA 72 bp | ATCACGCACTGTGGCCGTCACTTTAGCAGTTGGAGGTaGGACAGCAAAACTAGCACGAATTTCTTTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ITHCGRHFSSWR*DSKTSTNFFFL Trigger: AAGGAAAAAGAAATTCGTGCTAGTTTTGCTGTCTCACCTCCAACTGCTAAAGTGACGGCCACAGTGCGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 72 bp | TGCCCAGGCTGCACAGCGCGAGATTTCATCACAGCGTaGAATTTAAAACTTACGAATTGTTTATTTCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: CPGCTARDFITA*NLKLTNCLFPE Trigger: TTCCGGAAATAAACAATTCGTAAGTTTTAAATTGCACGCTGTGATGAAATCTCGCGCTGTGCAGCCTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 72 bp | GGAACACGTTTTCTGTTCATCTCTTCCACCCACAAATaGAGTGCCTGTTCCATCTTAACTAAGCACTTATCA | + |
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Preference number: 6 (lower is better) Translates to: GTRFLFISSTHK*SACSILTKHLS Trigger: TGATAAGTGCTTAGTTAAGATGGAACAGGCACTGCATTTGTGGGTGGAAGAGATGAACAGAAAACGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651129.1 |
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| CDS GCA 72 bp | CGTCACGCATTCTTTCCATATACTGGTCATAATGCTTaGTGTGATTGGTTTGATAGTGGCGTCTTAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: RHAFFPYTGHNA*CDWFDSGVLGY Trigger: ATAACCTAAGACGCCACTATCAAACCAATCACAGCAAGCATTATGACCAGTATATGGAAAGAATGCGTGACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451013.7 ENST00000651129.1 |
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