RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF2IRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006704

Ensembl transcript IDs: ENST00000265755.7, ENST00000424337.7, ENST00000455841.6, ENST00000470715.1, ENST00000476977.5, ENST00000486086.1, ENST00000489094.1

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTACATTTCCTTTAGTCTTTCTGAGTGAGGTCCTGATTCAGTACTaGGGTCTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCC +
Preference number: 1 (lower is better)
Translates to: ITFPLVFLSEVLIQY*GLVIKRSRELHVQA
Trigger: GGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAGACCTCAGTACTGAATCAGGACCTCACTCAGAAAGACTAAAGGAAATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR CAA 90 bp TGCCTGAGTGCCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTaGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGGAAG +
Preference number: 2 (lower is better)
Translates to: CLSACEYPTRRMGYL*GETGGCIYNPRGRK
Trigger: CTTCCGGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGGCACTCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAAGCCTCCCGAGTAGCTaGGATTATAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTATAATCCCAGCTACTCGGGAGGCT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR CAA 90 bp GTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATaGGCCATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTC +
Preference number: 2 (lower is better)
Translates to: VPGAARSGRHSPPCT*AIARERDKGTGLGL
Trigger: GAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR TCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATCTGCCTGAGTGCCTGTaGGTACCCCACGAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHLPECL*VPHEKD
Trigger: ATCCTTCTCGTGGGGTACTCACAGGCACTCAGGCAG...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCCACCCGACTTGACCTaGCAAAGTGCTGGGATTACA +
Preference number: 2 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHPPDLT*QSAGIT
Trigger: TGTAATCCCAGCACTTTGGCAGGTCAAGTCGGGTGG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR TCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGGGCTACCTCTTGGGTaGGACAGGTGGATGCATCTA +
Preference number: 2 (lower is better)
Translates to: RHSPPCTLAIARERDKGTGLPLG*DRWMHL
Trigger: TAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGAGGGACAAAGGGACTaGATTAGGACTCCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHEGQRD*IRTPGD
Trigger: ATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR TCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACTTTAGTCTTTCTGAGTaGGGTCCTGATTCAGTACTG +
Preference number: 2 (lower is better)
Translates to: IARERDKGTGLGLQVMRNFSLSE*GPDSVL
Trigger: CAGTACTGAATCAGGACCTCACTCAGAAAGACTAAA...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR GCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGGAACAAACCCAAAATaGTTAGTTCTGCTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: RHSPPCTLAIARERDKGTGTNPK*LVLLLE
Trigger: TTCCAAAAGCAGAACTAAGCATTTTGGGTTTGTTCC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACTATTTAAAAAGGCCTTaGTGGCAGGAATATAGTGTA +
Preference number: 2 (lower is better)
Translates to: IARERDKGTGLGLQVMRNYLKRP*WQEYSV
Trigger: TACACTATATTCCTGCCACCAAGGCCTTTTTAAATA...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR TCA 72 bp GCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCCTGTaGGTACCCCACGAGAAGGATGGGCTACCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: AQRGCEFLPECL*VPHEKDGLPLG
Trigger: CCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGGCACTCAGGCAGGAATTCACATCCTCGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR CAA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAAGGATGGGCTACCTCTaGGGTGAGACAGGTGGATGC +
Preference number: 3 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLRMGYL*GETGGC
Trigger: GCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR-3UTR CAA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGGTGATCCACCCGACTaGACCTGCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHGDPPD*TCQSAG
Trigger: CCCAGCACTTTGGCAGGTCAAGTCGGGTGGATCACC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR CCA 72 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTaGGTGAGACAGGTGGATGCATCTATAACCCCCGAG +
Preference number: 3 (lower is better)
Translates to: PVSTPREGWATS*VRQVDASITPE
Trigger: CTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR TCA 72 bp CCTTTAGTCTTTCTGAGTGAGGTCCTGATTCAGTACTaGGGTCTAGTAATTAAGAGGTCCCGGGAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: PLVFLSEVLIQY*GLVIKRSRELH
Trigger: GTGCAGCTCCCGGGACCTCTTAATTACTAGACCTCAGTACTGAATCAGGACCTCACTCAGAAAGACTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTGCTCCCGAGGCCAATaGCACCCCCGCCGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECCSRGQ*HPRRGL
Trigger: AAGGCCTCGGCGGGGGTGGCATTGGCCTCGGGAGCA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGGGCACCGGTGGCCTTaGGCTCTGGCATGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDGHRWP*ALAWAD
Trigger: GTCGGCCCATGCCAGAGCCCAAGGCCACCGGTGCCC...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCAGTCTTGGGCACCGGTaGCCTTGGGCTCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECSLGHR*PWALAW
Trigger: CCATGCCAGAGCCCAAGGCCACCGGTGCCCAAGACT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGGCACGGGGACCATGTaGTCCAGGCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAGTGTM*SRPRAS
Trigger: GGAAGCCCTGGGCCTGGACCACATGGTCCCCGTGCC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTCTCGTCTTTGCGGGTaGACGCGGAGTTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECSRLCG*TRSSSG
Trigger: ACCGCTGGAACTCCGCGTTCACCCGCAAAGACGAGA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCATCAGGCAGACCCGTaGCCTCCACGGCGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDHQADP*PPRRLG
Trigger: GCCCAGACGCCGTGGAGGTCACGGGTCTGCCTGATG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGCCTGGGGTGTCTTCTaGCGCCATGGGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLAWGVF*RHGCPC
Trigger: GCAGGGGCACCCATGGCGGCAGAAGACACCCCAGGC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCGGGTCCGCAGCCGTTaGTGGGGACGTCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDRVRSR*WGRHSA
Trigger: AGCGCTGTGACGTCCCCACCAACGGCTGCGGACCCG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCAGTGGCACCACACTaGCCCTTCCCAGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDAVAPH*PFPGPR
Trigger: GCGAGGCCCTGGGAAGGGCCAGTGTGGTGCCACTGC...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGGCACCTTGGGGGCCTaGCCATGCAGGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLGTLGA*PCRPQS
Trigger: GGACTGTGGCCTGCATGGCCAGGCCCCCAAGGTGCC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCAGCTCTCGGATGGCGTaGTTGGGGAGCGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEASSRMA*LGSAVL
Trigger: CAGCACGGCGCTCCCCAACCACGCCATCCGAGAGCT...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCGGTGGCCTTGGGCTCTaGCATGGGCCGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGGGLGL*HGPTQA
Trigger: GGCCTGAGTCGGCCCATGCCAGAGCCCAAGGCCACC...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCAAAGGGCACCAGGCCTaGGGTGTCTTCTGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECKGHQA*GVFCRH
Trigger: ATGGCGGCAGAAGACACCCCAGGCCTGGTGCCCTTT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTACCCAGCAAGGCCATaGTCGCCTGGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECYPARP*SPGLLS
Trigger: GGACAGGAGACCAGGCGACCATGGCCTTGCTGGGTA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCAGGCCACAGTCCCGTaGCCCCTTGGGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAQATVP*PLGNQG
Trigger: TCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCAAGGTGCTTCCTGCTTaGGCTCTCGGATGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECKVLPA*ALGWRG
Trigger: ACCACGCCATCCGAGAGCTCAAGCAGGAAGCACCTT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCGTTGGCCGATGCCACTaGATCCGGGTTAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECVGRCH*IRVRGR
Trigger: TCGTCCTCTAACCCGGATTCAGTGGCATCGGCCAAC...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTGGCCAGGCTGGTCTTaGACTCCTGAGCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECWPGWS*TPEPQV
Trigger: CACTTGAGGCTCAGGAGTTCAAGACCAGCCTGGCCA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTATTGGGGGCCTGGCCATaGAGGCCACAGTCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLLGAWP*RPQSRD
Trigger: GTCACGGGACTGTGGCCTGCATGGCCAGGCCCCCAA...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGGTTGGGGAGCGCCGTaGTGTACAGGAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAGWGAP*CTGSWP
Trigger: TGGCCAGCTTCCTGTACAGCACGGCGCTCCCCAACC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCTTGCCCAGGCTGCAGTaGAATGGCGCGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEALPRLQ*NGATSA
Trigger: AGCCGAGGTCGCGCCATTGCACTGCAGCCTGGGCAA...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTGGGTCCCCATGGCATaGCACAGGCTTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECWVPMA*HRLPGY
Trigger: ATACCCAGGAAGCCTGTGCCATGCCATGGGGACCCA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTACAGGGCCCCCAGTTGTaGGTCCCCATGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLQGPQL*VPMAWH
Trigger: GTGCCATGCCATGGGGACCCACAACTGGGGGCCCTG...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGCAGCCCTGGCTCCCTaGGCAGCCTCTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHAALAP*AASHRA
Trigger: TGCCCTATGAGAGGCTGCTCAGGGAGCCAGGGCTGC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCATGGACGTTCTGGATaGGAGGCCCACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDHGRSG*EAHQAQ
Trigger: CTGGGCCTGGTGGGCCTCTCATCCAGAACGTCCATG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCCTGGTCTTGAACTCCTaGGCCTCAAGTGATCCGCCT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECLVLNS*ASSDPP
Trigger: AGGCGGATCACTTGAGGCTCAGGAGTTCAAGACCAG...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAAAGGCGCTCTCATCGTaGACGGCGACACAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLKALSS*TATQAT
Trigger: GGTGGCCTGTGTCGCCGTGCACGATGAGAGCGCCTT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTTCTCCCCTTCTCTGTaGCCACCACAAAGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECFSPSL*PPQRRS
Trigger: AGAGCGCCTTTGTGGTGGGCACAGAGAAGGGGAGAA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGGCAGAAACCAGGTCTaGCTGCCACTGTTGCACCCC +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAGRNQV*LPLLHP
Trigger: GGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTGGGCTCAGTCCCGGTaGTCTCTGTGTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHWAQSR*SLCGPC
Trigger: GCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCATTGTCCAACCTGCTTaGCCACCTCCTGTACCCCCA +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECIVQPA*PPPVPP
Trigger: TGGGGGTACAGGAGGTGGGCAAGCAGGTTGGACAAT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCCACTCAAAGCCCAGTaGCTCCCCGTCCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPPLKAQ*LPVPWA
Trigger: GGCCCAGGGGACGGGGAGGCACTGGGCTTTGAGTGG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGTCCTCTGGCGGGCTaGCTGGCTCCAGCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHCPLAG*LAPASW
Trigger: CCACGAAGCTGGAGCCAGCCAGCCCGCCAGAGGACA...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATCGGATCACGTCACCGTaGCTGTCCTCCACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHRITSP*LSSTGL
Trigger: GAGGCCCGTGGAGGACAGCCACGGTGACGTGATCCG...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAAGGCCCAAGGCGTGTaGTCCCAGCCACAGACAGGC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDKAQGV*SQPQTG
Trigger: GCCTGTCTGTGGCTGGGACCACACGCCTTGGGCCTT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCACCCCACGAGAAGGATaGGCTACCTCTTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECTPREG*ATSWVR
Trigger: TCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAAGGGTGTGGGCAGGTaGACCTCAGCCGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDKGVGR*TSAGPS
Trigger: AGATGGGCCGGCTGAGGTCCACCTGCCCACACCCTT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCAGGCTTCCTGGGTATaGCAGTGTCCAGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDQASWV*QCPAGH
Trigger: GTGCCCAGCTGGACACTGTCATACCCAGGAAGCCTG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCTTCTTGGGGTGCTCTaGCTCCGGATCCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDLLGVL*LRILPR
Trigger: CCGTGGAAGGATCCGGAGGCAGAGCACCCCAAGAAG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCCTGTTAAACAGGATCTaGACACACTCCCGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECLLNRI*THSRSV
Trigger: CACGCTCCGGGAGTGTGTGCAGATCCTGTTTAACAG...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCCTGGGGGACAGAGCTaGATCCTCCCCCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHPGGQS*ILPLKS
Trigger: GGACTTGAGGGGGAGGATGCAGCTCTGTCCCCCAGG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCAGCAGGGCCGAGGCTaGTTTGTCTCAGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHQQGRG*FVSGQG
Trigger: CCCCTGACCTGAGACAAAGCAGCCTCGGCCCTGCTG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAACAGGCGTGAGCCACTaGACCCGCCAGCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLTGVSH*TRQPCL
Trigger: AAGACATGGCTGGCGGGTGCAGTGGCTCACGCCTGT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCGCTCATTGCAACCTCTaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECAHCNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCAGAGGTTGCAATGAGC...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCCTCGGCGTTCAGTTTaGACAGCGCTGAGCACATGG +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAPRRSV*TALSTW
Trigger: CCATGTGCTCAGCGCTGTCCAAACTGAACGCCGAGG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCGGGGTCATACTCGGCTaGCCTTCGGAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPGVILG*PSEGQA
Trigger: GGCCTGGCCTTCCGAAGGCCAGCCGAGTATGACCCC...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCTCGGATGGCGTGGTTaGGGAGCGCCGTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHLGWRG*GAPCCT
Trigger: TGTACAGCACGGCGCTCCCCAACCACGCCATCCGAG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCAGTCGGAGAAGTCTTaGGCACCGGTGGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHQSEKS*APVALG
Trigger: GCCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCTCTGGCGGGCTGGCTaGCTCCAGCTTCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPLWRAG*LQLRGV
Trigger: GACACCACGAAGCTGGAGCCAGCCAGCCCGCCAGAG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCTGCAGAGGTGTCCTCTaGCGGGCTGGCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPCRGVL*RAGWLQ
Trigger: CTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCA...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCTCCCCGGAGGTTCCTaGCCCACAGTCTTCAGACAT +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEALPGGS*PTVFRH
Trigger: ATGTCTGAAGACTGTGGGCCAGGAACCTCCGGGGAG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCTGTGTGGCCCCTGCTaGGTGTTGATGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGLCGPC*VLMAES
Trigger: GCTCTCTGCCATCAACACCCAGCAGGGGCCACACAG...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCGCCTCCTTTGGCTCCTaGTTCTACCCTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGASFGS*FYPAPL
Trigger: GAGAGGGGCAGGGTAGAACCAGGAGCCAAAGGAGGC...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAGCCTCCCGGGTAGCTaGGATTACAGGTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDSLPGS*DYRCHH
Trigger: GTGGTGGCACCTGTAATCCCAGCTACCCGGGAGGCT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATAAGTGCAGGGGCGCTTaGAGGGGATCTTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHKCRGA*RGSCPG
Trigger: TCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCCCCTTGGGCTCAAATaGTCCTCCTGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPPLGLK*SSCPSL
Trigger: GAGGCTGGGGCAGGAGGATCATTTGAGCCCAAGGGG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATTCTCTGTGTGGCCCCTaGTGGGTGTTGATGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDSLCGP*WVLMAE
Trigger: CTCTGCCATCAACACCCAGCAGGGGCCACACAGAGA...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTGGGCACCCATGAGATaGAAAGATCAGCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECWAPMR*KDQPPL
Trigger: CAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGCGACCTCGGCTCATTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHATSAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAATGAGCCGAGGTCGC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTATTGAAGCGGATGCGGTaGCTGTGTTCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLLKRMR*LCSRMA
Trigger: GGCCATCCTGGAACACAGCCACCGCATCCGCTTCAA...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCCTTGGGCTCTGGCATaGGCCGACTCAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNPWALA*ADSGPG
Trigger: ACCTGGGCCTGAGTCGGCCCATGCCAGAGCCCAAGG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGAGGCATGGACGTTCTaGATGAGAGGCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHEAWTF*MRGPPG
Trigger: GCCTGGTGGGCCTCTCATCCAGAACGTCCATGCCTC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCGGTTGGCGAGGGGTCTaGGACGGTGACCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGGWRGV*DGDLND
Trigger: ATCATTCAGGTCACCGTCCCAGACCCCTCGCCAACC...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTCGGAACGGGATTCCTaGGGGCAGCCCCTCGATGAT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHSERDS*GQPLDD
Trigger: ATCATCGAGGGGCTGCCCCCAGGAATCCCGTTCCGA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTTTGGGATGAGTCCTTaGAAAGGCCTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECFGMSP*KGLVTV
Trigger: CACAGTCACCAGGCCTTTCCAAGGACTCATCCCAAA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCCGGTGCTCTCTGTGTaGCCCCTGCTGGGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHPVLSV*PLLGVD
Trigger: ATCAACACCCAGCAGGGGCCACACAGAGAGCACCGG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAGTTGTGGGTCCCCATaGCATGGCACAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDSCGSP*HGTGFL
Trigger: CAGGAAGCCTGTGCCATGCCATGGGGACCCACAACT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGCCCTCGGCAGAACCTaGGGAAGTCTGACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHALGRT*GSLTVA
Trigger: AGCTACAGTCAGACTTCCTCAGGTTCTGCCGAGGGC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCACTCCCGGAGCGTGTTaGTGTCCTCGGTTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEATPGAC*CPRFPL
Trigger: TAAAGGAAACCGAGGACATCAACACGCTCCGGGAGT...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCCTTCCGCATGCCTCTaGGCTCTGCCGTCACATTTC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHPSACL*ALPSHF
Trigger: GAAATGTGACGGCAGAGCTCAGAGGCATGCGGAAGG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGGGCTACCTCTTGGGTaGGACAGGTGGATGCATCTA +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLGLPLG*DRWMHL
Trigger: TAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATAAGGGGGCAGGAAGGTaGTTCCTGCTTGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHKGAGR*FLLELS
Trigger: CGAGAGCTCAAGCAGGAAGCACCTTCCTGCCCCCTT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGGCCCTAGAGACCTCTaGAGAGGTGTCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTGPRDL*RGVLWR
Trigger: CCGCCAGAGGACACCTCTGCAGAGGTCTCTAGGGCC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGAAACCAGGTCTGCCTaGCACTGTTGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHETRSA*HCCTPG
Trigger: TCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAAGGACTGTGTCCTGTTaGAATGGGGTTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLRTVSC*NGVPGG
Trigger: TCCCCCAGGAACCCCATTGCAACAGGACACAGTCCT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATCTGCATCAAGCCACATaGTCCCGAGGCCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHLHQAT*SRGQCH
Trigger: GTGGCATTGGCCTCGGGAGCATGTGGCTTGATGCAG...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTACACCCTTCCTGGTCCTaGCATCATCTGCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLHPSWS*HHLLVV
Trigger: GACAACCAGCAGATGATGGCAGGACCAGGAAGGGTG...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCTGCTTCCCTAGTCTGTaGAGGTTCAGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGCFPSL*RFSSRC
Trigger: GCAGCGGGAACTGAACCTGCACAGACTAGGGAAGCA...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGGCCACAGAGATGAGTaGCGGAGTCCAAATCGGTGC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHGHRDE*RSPNRC
Trigger: GCACCGATTTGGACTCCGGCACTCATCTCTGTGGCC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGTCCGCAGCCGTTGGTaGGGACGTCACAGCGCTTAC +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTVRSRW*GRHSAY
Trigger: GTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGAC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCCCGCTGCACCTTCTTaGGGTGCTCTGCCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNPAAPS*GALPPD
Trigger: ATCCGGAGGCAGAGCACCCCAAGAAGGTGCAGCGGG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCCTCTCATAGGGCAGTaGCACCACACTGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPPLIGQ*HHTGPS
Trigger: GGAAGGGCCAGTGTGGTGCCACTGCCCTATGAGAGG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATAGTCCCGTGACCCCTTaGGAATCAGGGAGACACCGT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHSPVTP*ESGRHR
Trigger: ACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGGATCCGCTTCAGCTTaGGGACTCCATAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLGSASA*GLHKCR
Trigger: CCTGCACTTATGGAGTCCCCAAGCTGAAGCGGATCC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGCTCCGAGATGCCAATaGCCTTGGCGTATCGTGTGT +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLAPRCQ*PWRIVC
Trigger: ACACACGATACGCCAAGGCCATTGGCATCTCGGAGC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACGGAGGACCATGGGGCTaGCACCACAAAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNGGPWG*HHKGHQ
Trigger: CTGGTGCCCTTTGTGGTGCCAGCCCCATGGTCCTCC...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCAAGATCAGCCTCCTTTaGCTCCTGGTTCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAKISLL*LLVLPC
Trigger: GCAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTT...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCCTAGCCAGGAGACTTaGCATCAGGGGTATGGAAAG +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAPSQET*HQGYGK
Trigger: CTTTCCATACCCCTGATGCCAAGTCTCCTGGCTAGG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGCAATGGGACGATCTTaGCTCACTGCAGCCTCAATC +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAAMGRS*LTAASI
Trigger: GATTGAGGCTGCAGTGAGCCAAGATCGTCCCATTGC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
3UTR CAA 72 bp GCCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTaGGGTGAGACAGGTGGATGCATCTATAACCCCCGA +
Preference number: 4 (lower is better)
Translates to: ACEYPTRRMGYL*GETGGCIYNPR
Trigger: TCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCAGAAGGTACACATCTaGGCCATGTTCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGQKVHI*AMFQGG
Trigger: TCCTCCCTGGAACATGGCTCAGATGTGTACCTTCTG...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCAGGAAGGTGCTTCCTaGTTGAGCTCTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPQEGAS*LSSRMA
Trigger: CGCCATCCGAGAGCTCAAGCAGGAAGCACCTTCCTG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGATGGAGAAGAGAATaGGCTTGGAGGCATGGACGT +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGRWRRE*AWRHGR
Trigger: ACGTCCATGCCTCCAAGCGCATTCTCTTCTCCATCG...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCGGATCTTGTCCGGGATaGCCACGATCTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPGSCPG*PRSPQP
Trigger: AGGCTGTGGAGATCGTGGGCATCCCGGACAAGATCC...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCAAAAGGTCCTGGACCTaGTCCCTTAGTGTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGKRSWT*SLSVLA
Trigger: CGCCAACACACTAAGGGAGCAGGTCCAGGACCTTTT...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTATCTTGCGCTTGGGAATaGTGCTGTCTTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLSCAWE*CCLWLA
Trigger: TGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGA...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCTTGACCTGCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDLDLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGCAGGTCAAG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCGCGACCACAGGCACGTaGCACCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPATTGT*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCACGTGCCTGTGGTCGC...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTTGCCCAGGCTGGAGTaGAATGGGACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHLPRLE*NGTILA
Trigger: AGCCAAGATCGTCCCATTGCACTCCAGCCTGGGCAA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACGCCCACCAGGCCCAGTaGGCTTCTGTCCACAACAGT +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNAHQAQ*ASVHNS
Trigger: ACTGTTGTGGACAGAAGCCCACTGGGCCTGGTGGGC...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATATGCGCTTGGAGGCATaGACGTTCTGGATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHMRLEA*TFWMRG
Trigger: GCCTCTCATCCAGAACGTCCATGCCTCCAAGCGCAT...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCGAGTGAGATCTGGTTaGCCGATGCCACTGAATCCG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHRVRSG*PMPLNP
Trigger: CGGATTCAGTGGCATCGGCCAACCAGATCTCACTCG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTCTCGGTTCCCCTCTATaGGCTCAGTCCCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTLGSPL*AQSRCS
Trigger: AGAGCACCGGGACTGAGCCCATAGAGGGGAACCGAG...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCATGACAGTGTCCAGCTaGGCACCCATGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAMTVSS*APMRCK
Trigger: TTTGCATCTCATGGGTGCCCAGCTGGACACTGTCAT...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTTGCAATGGGGTTCCTaGGGGACAGAGCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHLQWGS*GTELHP
Trigger: AGGATGCAGCTCTGTCCCCCAGGAACCCCATTGCAA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGCAACCTCCCCTTCCTaGGTTCGAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHATSPS*VRVILL
Trigger: CAGGAGAATCACTCGAACCCAGGAAGGGGAGGTTGC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAACCACGAGTGAGATCTaGTTGGCCGATGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLTTSEI*LADATE
Trigger: TTCAGTGGCATCGGCCAACCAGATCTCACTCGTGGT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTACAGCCTCAATCCCCTTaGGCTCAAATGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLQPQSP*AQMILL
Trigger: CAGGAGGATCATTTGAGCCCAAGGGGATTGAGGCTG...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCCAGCTGGGCACCCATaGGATGCAAAGATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNPAGHP*DAKISL
Trigger: GAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTGG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTCTGCCTGAGTGCCTGTaGGTACCCCACGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTLPECL*VPHEKD
Trigger: ATCCTTCTCGTGGGGTACTCACAGGCACTCAGGCAG...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTTGCACCTTCTTGGGGTaGTCTGCCTCCGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTCTFLG*SASGSF
Trigger: GAAGGATCCGGAGGCAGAGCACCCCAAGAAGGTGCA...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATAGACCCGCTTTCTCTTaGGCTTGGGAATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHRPAFS*AWECCC
Trigger: ACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCTGCCGTCACATTTCTaGATCAAGCCACATGCTCCC +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHLPSHF*IKPHAP
Trigger: GGGAGCATGTGGCTTGATGCAGAAATGTGACGGCAG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCGGTGAGACAGGTGGATaGATCTATAACCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPGETGG*IYNPRG
Trigger: GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACC...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATCCACCCGACTTGACCTaGCAAAGTGCTGGGATTACA +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHPPDLT*QSAGIT
Trigger: TGTAATCCCAGCACTTTGGCAGGTCAAGTCGGGTGG...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGCTCCCTTAGTGTGTTaGCGATGTCGATCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHAPLVC*RCRSVR
Trigger: TCTCACGGATCGACATCGCCAACACACTAAGGGAGC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGAATGCTGCTGTCTTTaGCTGGCACCTTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDECCCL*LAPWHH
Trigger: ATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTC...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGCTTTCTCTTGCGCTTaGGAATGCTGCTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLAFSCA*ECCCLW
Trigger: CCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTATGGCCGGTGGGCGTTTaGCCAAAATGTATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLWPVGV*PKCMLS
Trigger: ACTCAACATACATTTTGGCCAAACGCCCACCGGCCA...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATCTCTGGCCTCAGTTCTaGCTCTCCTCTGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHLWPQF*LSSAFW
Trigger: CCAAAAAGCAGAGGAGAGCCAGAACTGAGGCCAGAG...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACAGTTTCTGCACCCAATaGGGTAGGGAAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNSFCTQ*GREGPG
Trigger: GCCTGGGCCTTCCCTACCCCATTGGGTGCAGAAACT...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCTGTGTCCTGTTGCAATaGGGTTCCTGGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPCVLLQ*GSWGTE
Trigger: CTCTGTCCCCCAGGAACCCCATTGCAACAGGACACA...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTTGGCATCAGGGGTATaGAAAGATACAGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHLASGV*KDTAGP
Trigger: CGGCCCTGCTGTATCTTTCCATACCCCTGATGCCAA...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCGTCCACCATGTACATTaGCCATTGCTAGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGVHHVH*PLLERG
Trigger: CCCTCTCTCTAGCAATGGCCAATGTACATGGTGGAC...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTTGCGCTTGGGAATGCTaGTGTCTTTGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTCAWEC*CLWLAP
Trigger: AGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCA...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCAGACAGGGAGTTTCTaGACCCAATGGGGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPQTGSF*TQWGRE
Trigger: TTCCCTACCCCATTGGGTGCAGAAACTCCCTGTCTG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCGGAGTCCAAATCGGTaGAACTTTACCACGAGTGAG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHRSPNR*NFTTSE
Trigger: CTCACTCGTGGTAAAGTTGCACCGATTTGGACTCCG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCACAGCGCTGAGCACATaGAGTCTAAGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPTALST*SLRQTR
Trigger: TCGTGTCTGCCTTAGACTCCATGTGCTCAGCGCTGT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCATGAAGTGGATACTATaGCGCTCCTCCAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPMKWIL*RSSRIR
Trigger: GCGGATCCTGGAGGAGCGCCATAGTATCCACTTCAT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGCAAAGGGTTGGAGCTaGTTAATGATGACCATGCGG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHAKGWS*LMMTMR
Trigger: CCGCATGGTCATCATTAACCAGCTCCAACCCTTTGC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGGATGGGCTACCTCTTaGGTGAGACAGGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTGWATS*VRQVDA
Trigger: TGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGAGGGACAAAGGGACTaGATTAGGACTCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHEGQRD*IRTPGD
Trigger: ATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCCTCGGTTTCCTTTATaGAGGCGTCCCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNPRFPL*RRPTSL
Trigger: CAGAGAAGTGGGACGCCTTCATAAAGGAAACCGAGG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCTTCCAGCAGGTCATaGTATATGATCATTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGPSSRS*YMIIGQ
Trigger: TTGGCCAATGATCATATATCATGACCTGCTGGAAGG...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTCAACTTTACCACGAGTaGGATCTGGTTGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTQLYHE*DLVGRC
Trigger: GCATCGGCCAACCAGATCTCACTCGTGGTAAAGTTG...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAGTTCTGGCTCTCCTCTaGTTTTTGGCTGTGGATAAA +
Preference number: 4 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLVLALL*FLAVDK
Trigger: TTTATCCACAGCCAAAAAGCAGAGGAGAGCCAGAAC...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCCTCTGTCTCCTACCTaGAGACAGGGAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNPLSPT*RQGVSA
Trigger: TGCAGAAACTCCCTGTCTGCAGGTAGGAGACAGAGG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCAAGGCAGCTGTCCCTaGACCAATCCAAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPQGSCP*TNPSKE
Trigger: TTCTTTGCTTGGATTGGTGCAGGGACAGCTGCCTTG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATCTCTTAATGATGAAGTaGATACTATGGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVSTPREGWATSWVRQVDLLMMK*ILWRSS
Trigger: GGAGGAGCGCCATAGTATCCACTTCATCATTAAGAG...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACGCTGCTGTCTTTGGCTaGCACCTTGGCATCATTGCA +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNAAVFG*HLGIIA
Trigger: TGCAATGATGCCAAGGTGCCAGCCAAAGACAGCAGC...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCACAGAACAGGAGATGTaGCAGTGCATCACACTTCAC +
Preference number: 4 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPTEQEM*QCITLH
Trigger: GTGAAGTGTGATGCACTGTCACATCTCCTGTTCTGT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCATCATTGCAGATTTCTaGAAAGGGTTGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGIIADF*KGLELV
Trigger: AACCAGCTCCAACCCTTTGCAGAAATCTGCAATGAT...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCATGCCTCTGAGCTCTaGCGTCACATTTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNHASEL*RHISAS
Trigger: TGATGCAGAAATGTGACGGCAGAGCTCAGAGGCATG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTAGAAGAGAATGCGCTTaGAGGCATGGACGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTRRECA*RHGRSG
Trigger: TCCAGAACGTCCATGCCTCCAAGCGCATTCTCTTCT...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR GCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGGAACAAACCCAAAATaGTTAGTTCTGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEAGTNPK*LVLLLE
Trigger: TTCCAAAAGCAGAACTAAGCATTTTGGGTTTGTTCC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACACTTGTCATGGACGATaGAGAAGAGAATGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNTCHGR*RRECAW
Trigger: CCAAGCGCATTCTCTTCTCCATCGTCCATGACAAGT...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATATTTCTGCAAAGGGTTaGAGCTGGTTAATGATGACC +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHISAKG*SWLMMT
Trigger: GGTCATCATTAACCAGCTCCAACCCTTTGCAGAAAT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACATTGATTTAAACAACTaGCCGGTGGGCGTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNIDLNN*PVGVWP
Trigger: TGGCCAAACGCCCACCGGCCAGTTGTTTAAATCAAT...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCTCTCCTCTGCTTTTTaGCTGTGGATAAATATTGAT +
Preference number: 4 (lower is better)
Translates to: GWATSWVRQVDASITPEALSSAF*LWINID
Trigger: ATCAATATTTATCCACAGCCAAAAAGCAGAGGAGAG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTCCTGCCATCATCTGCTaGTTGTCCTTGAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTPAIIC*LSLKLF
Trigger: AAAAAGCTTCAAGGACAACCAGCAGATGATGGCAGG...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR TCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACGTCCTGATTCAGTACTaGGGTCTAGTAATTAAGAGG +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNVLIQY*GLVIKR
Trigger: CCTCTTAATTACTAGACCTCAGTACTGAATCAGGAC...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACTTCTCTGACTTGTCATaGACGATGGAGAAGAGAATG +
Preference number: 4 (lower is better)
Translates to: IARERDKGTGLGLQVMRNFSDLS*TMEKRM
Trigger: CATTCTCTTCTCCATCGTCCATGACAAGTCAGAGAA...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATATGATATATGATCATTaGCCAATGACACAGAACAGG +
Preference number: 4 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHMIYDH*PMTQNR
Trigger: CCTGTTCTGTGTCATTGGCCAATGATCATATATCAT...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTATTTAAAAAGGCCTTaGTGGCAGGAATATAGTGTA +
Preference number: 4 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHYLKRP*WQEYSV
Trigger: TACACTATATTCCTGCCACCAAGGCCTTTTTAAATA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CCA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTTTAAAAAGGCCTTGGTaGCAGGAATATAGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: RHSPPCTLAIARERDKGTLKRPW*QEYSVK
Trigger: TTTTACACTATATTCCTGCCACCAAGGCCTTTTTAA...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GCTGTGTTCCAGGATGGCCATGAGGGCCTTGGGGTCATACTCGGCTaGCCTTCGGAAGGCCAGGCCTTCGGGCAGCCCCTGCACGGCCAG +
Preference number: 5 (lower is better)
Translates to: AVFQDGHEGLGVILG*PSEGQAFGQPLHGQ
Trigger: CTGGCCGTGCAGGGGCTGCCCGAAGGCCTGGCCTTCCGAAGGCCAGCCGAGTATGACCCCAAGGCCCTCATGGCCATCCTGGAACACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS-3UTR CAA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCTCGGGTCCGCAGCCGTaGGTGGGGACGTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECSGPQP*VGTSQR
Trigger: GCGCTGTGACGTCCCCACCAACGGCTGCGGACCCGA...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GCACCTTGGGGGCCTGGCCATGCAGGCCACAGTCCCGTGACCCCTTaGGAATCAGGGAGACACCGTTCAGCTCCACCAGGGCCTTCGAGT +
Preference number: 5 (lower is better)
Translates to: APWGPGHAGHSPVTP*ESGRHRSAPPGPSS
Trigger: ACTCGAAGGCCCTGGTGGAGCTGAACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATGGCCAGGCCCCCAAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 90 bp GCTTCTGTCCACAACAGTCGGAGAAGTCTTGGGCACCGGTGGCCTTaGGCTCTGGCATGGGCCGACTCAGGCCCAGGTCGCTGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: ASVHNSRRSLGHRWP*ALAWADSGPGRWGQ
Trigger: TTGCCCCCAGCGACCTGGGCCTGAGTCGGCCCATGCCAGAGCCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTGTTGTGGACAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 90 bp CCGAGCATTCCCAGCAAGGTCAAGGACGGTGGCCCTAGAGACCTCTaGAGAGGTGTCCTCTGGCGGGCTGGCTGGCTCCAGCTTCGTGGT +
Preference number: 5 (lower is better)
Translates to: PSIPSKVKDGGPRDL*RGVLWRAGWLQLRG
Trigger: ACCACGAAGCTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCAGAGGTCTCTAGGGCCACCGTCCTTGACCTTGCTGGGAATGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 90 bp CTGCCTGCCACTGTTGCACCCCAGGATCCCGACCAGTGCCCAGTGTaGATAAGGCCCAAGGCGTGTGGTCCCAGCCACAGACAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPATVAPQDPDQCPV*IRPKACGPSHRQAF
Trigger: GAAGGCCTGTCTGTGGCTGGGACCACACGCCTTGGGCCTTATGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GCAAGGGGGCAGGAAGGTGCTTCCTGCTTGAGCTCTCGGATGGCGTaGTTGGGGAGCGCCGTGCTGTACAGGAAGCTGGCCATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ARGQEGASCLSSRMA*LGSAVLYRKLAMEE
Trigger: CTCCTCCATGGCCAGCTTCCTGTACAGCACGGCGCTCCCCAACCACGCCATCCGAGAGCTCAAGCAGGAAGCACCTTCCTGCCCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 90 bp TCCCCTCTATGGGCTCAGTCCCGGTGCTCTCTGTGTGGCCCCTGCTaGGTGTTGATGGCAGAGAGCAGGGCTGCAGTTCCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SPLWAQSRCSLCGPC*VLMAESRAAVPKGA
Trigger: GGCTCCCTTGGGAACTGCAGCCCTGCTCTCTGCCATCAACACCCAGCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCATAGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GCCTCTCGGTTCCCCTCTATGGGCTCAGTCCCGGTGCTCTCTGTGTaGCCCCTGCTGGGTGTTGATGGCAGAGAGCAGGGCTGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: ASRFPSMGSVPVLSV*PLLGVDGREQGCSS
Trigger: GGAACTGCAGCCCTGCTCTCTGCCATCAACACCCAGCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCATAGAGGGGAACCGAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp CGCAGCCGTTGGTGGGGACGTCACAGCGCTTACCCAGCAAGGCCATaGTCGCCTGGTCTCCTGTCCCTCACTCCAGTTCCCCCTCACACT +
Preference number: 5 (lower is better)
Translates to: RSRWWGRHSAYPARP*SPGLLSLTPVPPHT
Trigger: AGTGTGAGGGGGAACTGGAGTGAGGGACAGGAGACCAGGCGACCATGGCCTTGCTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp GGTTCCCCTCTATGGGCTCAGTCCCGGTGCTCTCTGTGTGGCCCCTaGTGGGTGTTGATGGCAGAGAGCAGGGCTGCAGTTCCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: GSPLWAQSRCSLCGP*WVLMAESRAAVPKG
Trigger: TCCCTTGGGAACTGCAGCCCTGCTCTCTGCCATCAACACCCAGCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCATAGAGGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp CGCATGCCTCTGAGCTCTGCCGTCACATTTCTGCATCAAGCCACATaGTCCCGAGGCCAATGCCACCCCCGCCGAGGCCTTCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RMPLSSAVTFLHQAT*SRGQCHPRRGLPAS
Trigger: TGAGGCTGGAAGGCCTCGGCGGGGGTGGCATTGGCCTCGGGAGCATGTGGCTTGATGCAGAAATGTGACGGCAGAGCTCAGAGGCATGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCATGGCCATGAGGGCCTaGGGGTCATACTCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECMAMRA*GSYSAG
Trigger: GCCAGCCGAGTATGACCCCAAGGCCCTCATGGCCAT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp AAACCAGGTCTGCCTGCCACTGTTGCACCCCAGGATCCCGACCAGTaGCCAGTGTGCATAAGGCCCAAGGCGTGTGGTCCCAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: KPGLPATVAPQDPDQ*PVCIRPKACGPSHR
Trigger: TCTGTGGCTGGGACCACACGCCTTGGGCCTTATGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp CGCCCGCCATCCTCAAGTGGCCTCTTGAGCTTGAAGCGGATGCGGTaGCTGTGTTCCAGGATGGCCATGAGGGCCTTGGGGTCATACTCG +
Preference number: 5 (lower is better)
Translates to: RPPSSSGLLSLKRMR*LCSRMAMRALGSYS
Trigger: CGAGTATGACCCCAAGGCCCTCATGGCCATCCTGGAACACAGCCACCGCATCCGCTTCAAGCTCAAGAGGCCACTTGAGGATGGCGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 90 bp TTGGTGGGGACGTCACAGCGCTTACCCAGCAAGGCCATGGTCGCCTaGTCTCCTGTCCCTCACTCCAGTTCCCCCTCACACTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: LVGTSQRLPSKAMVA*SPVPHSSSPSHSML
Trigger: GAGCATGGAGTGTGAGGGGGAACTGGAGTGAGGGACAGGAGACCAGGCGACCATGGCCTTGCTGGGTAAGCGCTGTGACGTCCCCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCCCGCTGCACCTTCTaGGGGTGCTCTGCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGPRCTF*GCSASG
Trigger: TCCGGAGGCAGAGCACCCCAAGAAGGTGCAGCGGGG...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATTCCTGGGGTGGCACCTaGGGGGCCTGGCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHSWGGT*GAWPCR
Trigger: CCTGCATGGCCAGGCCCCCAAGGTGCCACCCCAGGA...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp CAGCTGGGCACCCATGAGATGCAAAGATCAGCCTCCTTTGGCTCCTaGTTCTACCCTGCCCCTCTCCTTCTTGACCCAGGGGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: QLGTHEMQRSASFGS*FYPAPLLLDPGGTH
Trigger: GTGGGTGCCCCCTGGGTCAAGAAGGAGAGGGGCAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCAGGAGGAGGTGGCGGTaGGGGGCAGGTCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPRRRWR*GAGPGV
Trigger: CACCCCAGGACCTGCCCCCAACCGCCACCTCCTCCT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGTCTGCCTGCCACTGTaGCACCCCAGGATCCCGACC +
Preference number: 5 (lower is better)
Translates to: PVSTPREGWATSWVRQVDVCLPL*HPRIPT
Trigger: GGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGAC...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp AACATTCTCCCCTTCTCTGTGCCCACCACAAAGGCGCTCTCATCGTaGACGGCGACACAGGCCACCTCGGCGTTCAGTTTGGACAGCGCT +
Preference number: 5 (lower is better)
Translates to: NILPFSVPTTKALSS*TATQATSAFSLDSA
Trigger: AGCGCTGTCCAAACTGAACGCCGAGGTGGCCTGTGTCGCCGTGCACGATGAGAGCGCCTTTGTGGTGGGCACAGAGAAGGGGAGAATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS-3UTR CAA 90 bp TGGACCTCAGCCGGCCCATCTGCCCAGCGAGGATGTGAATTCCTGCCTGAGTGCAGCAGCTCGGGCCTCTaGATGACAAACTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: WTSAGPSAQRGCEFLPECSSSGL*MTNWML
Trigger: CAGCATCCAGTTTGTCATCAAGAGGCCCGAGCTGCT...GCACTCAGGCAGGAATTCACATCCTCGCTGGGCAGATGGGCCGGCTGAGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGGCCCCTGCTGGGTGTaGATGGCAGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHGPCWV*MAESRA
Trigger: AGCCCTGCTCTCTGCCATCAACACCCAGCAGGGGCC...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCCAGGACTGTGTCCTGTaGCAATGGGGTTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GWATSWVRQVDASITPEAQDCVL*QWGSWG
Trigger: CCCCCAGGAACCCCATTGCAACAGGACACAGTCCTG...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp ACTGTAGCTCCTTCCGGGCATTCAGGAACATTCTCCCCTTCTCTGTaGCCACCACAAAGGCGCTCTCATCGTGCACGGCGACACAGGCCA +
Preference number: 5 (lower is better)
Translates to: TVAPSGHSGTFSPSL*PPQRRSHRARRHRP
Trigger: TGGCCTGTGTCGCCGTGCACGATGAGAGCGCCTTTGTGGTGGGCACAGAGAAGGGGAGAATGTTCCTGAATGCCCGGAAGGAGCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 90 bp AAGGTCAAGGACGGTGGCCCTAGAGACCTCTGCAGAGGTGTCCTCTaGCGGGCTGGCTGGCTCCAGCTTCGTGGTGTCTTTGGTAAACTT +
Preference number: 5 (lower is better)
Translates to: KVKDGGPRDLCRGVL*RAGWLQLRGVFGKL
Trigger: AAGTTTACCAAAGACACCACGAAGCTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCAGAGGTCTCTAGGGCCACCGTCCTTGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCTCTCGGATGGCGTGGTaGGGGAGCGCCGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPSRMAW*GSAVLY
Trigger: GTACAGCACGGCGCTCCCCAACCACGCCATCCGAGA...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CTAGTAATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATACAGTCGGAGAAGTCTaGGGCACCGGTGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LVIKRSRELHVQAGIVHHTVGEV*GTGGLG
Trigger: CCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTGT...ATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAATTACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTACGCTTGAAGGGGATCTaGTCCGGGATGCCCACGATC +
Preference number: 5 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLRLKGI*SGMPTI
Trigger: GATCGTGGGCATCCCGGACAAGATCCCCTTCAAGCG...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGTCCAGGGCCCCCAGTaGTGGGTCCCCATGGCATGG +
Preference number: 5 (lower is better)
Translates to: RHSPPCTLAIARERDKGTVQGPQ*WVPMAW
Trigger: CCATGCCATGGGGACCCACAACTGGGGGCCCTGGAC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp TCTGTAAGCTCTTTGAGGGCAGAAACCAGGTCTGCCTGCCACTGTTaGACCCCAGGATCCCGACCAGTGCCCAGTGTGCATAAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SVSSLRAETRSACHC*TPGSRPVPSVHKAQ
Trigger: TTGGGCCTTATGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCCCTCAAAGAGCTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp ACAGGCTTCCTGGGTATGACAGTGTCCAGCTGGGCACCCATGAGATaGAAAGATCAGCCTCCTTTGGCTCCTGGTTCTACCCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TGFLGMTVSSWAPMR*KDQPPLAPGSTLPL
Trigger: GAGGGGCAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTGGACACTGTCATACCCAGGAAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp TCATGGACGATGGAGAAGAGAATGCGCTTGGAGGCATGGACGTTCTaGATGAGAGGCCCACCAGGCCCAGTGGGCTTCTGTCCACAACAG +
Preference number: 5 (lower is better)
Translates to: SWTMEKRMRLEAWTF*MRGPPGPVGFCPQQ
Trigger: CTGTTGTGGACAGAAGCCCACTGGGCCTGGTGGGCCTCTCATCCAGAACGTCCATGCCTCCAAGCGCATTCTCTTCTCCATCGTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 90 bp TCCCCATGGCATGGCACAGGCTTCCTGGGTATGACAGTGTCCAGCTaGGCACCCATGAGATGCAAAGATCAGCCTCCTTTGGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SPWHGTGFLGMTVSS*APMRCKDQPPLAPG
Trigger: ACCAGGAGCCAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTGGACACTGTCATACCCAGGAAGCCTGTGCCATGCCATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp GGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCCGTGATGATCTCGTCTTaGCGGGTGAACGCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GWATSWVRQVDASITPEAVMISS*RVNAEF
Trigger: GAACTCCGCGTTCACCCGCAAAGACGAGATCATCAC...GGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAACCTCGGCGTTCAGTTaGGACAGCGCTGAGCACATG +
Preference number: 5 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLTSAFS*DSAEHM
Trigger: CATGTGCTCAGCGCTGTCCAAACTGAACGCCGAGGT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTAGGGCCGAGGCTGCTTaGTCTCAGGTCAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RHSPPCTLAIARERDKGTRAEAA*SQVRGS
Trigger: GGAGCCCCTGACCTGAGACAAAGCAGCCTCGGCCCT...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAGGATGGGCTACCTCTaGGGTGAGACAGGTGGATGC +
Preference number: 5 (lower is better)
Translates to: PVSTPREGWATSWVRQVDRMGYL*GETGGC
Trigger: GCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS TCA 90 bp AACATCAAACACCTCCTCTACCATCTTCCGCAGAAGGTACACATCTaGGCCATGTTCCAGGGAGGACCGAGGGAGGCTACGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: NIKHLLYHLPQKVHI*AMFQGGPREATAST
Trigger: GGTGGAGGCCGTAGCCTCCCTCGGTCCTCCCTGGAACATGGCTCAGATGTGTACCTTCTGCGGAAGATGGTAGAGGAGGTGTTTGATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCAGTGGCCTCTTGAGCTaGAAGCGGATGCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPSGLLS*KRMRWL
Trigger: CAGCCACCGCATCCGCTTCAAGCTCAAGAGGCCACT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTATCAGACATGCTGCCCTaGTCTGACCGAGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLSDMLP*SDRAFP
Trigger: TGGGAATGCTCGGTCAGACAAGGGCAGCATGTCTGA...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGAGACCCGCTTTCTCTaGCGCTTGGGAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHETRFL*RLGMLL
Trigger: CAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp AGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCGAGGCACGAGTGAGATCTGGTaGGCCGATGCCACTGAATCC +
Preference number: 5 (lower is better)
Translates to: RMGYLLGETGGCIYNPRGTSEIW*ADATES
Trigger: GGATTCAGTGGCATCGGCCAACCAGATCTCACTCGT...GCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS TCA 90 bp GATGTTCATGCTTCCCTAGTCTGTGCAGGTTCAGTTCCCGCTGCCTaGAGCACCCTTCCTGGTCCTGCCATCATCTGCTGGTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: DVHASLVCAGSVPAA*STLPGPAIICWLSL
Trigger: CAAGGACAACCAGCAGATGATGGCAGGACCAGGAAGGGTGCTTCAGGCAGCGGGAACTGAACCTGCACAGACTAGGGAAGCATGAACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp GAGGTGTCCAACCACAGGGACAGAAACATCCCGAGAAATGAGAGATaGATCAGAGCTCGGCTCTGGCCTCAGTTCTGGCTCTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: EVSNHRDRNIPRNER*IRARLWPQFWLSSA
Trigger: AGCAGAGGAGAGCCAGAACTGAGGCCAGAGCCGAGCTCTGATGCATCTCTCATTTCTCGGGATGTTTCTGTCCCTGTGGTTGGACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp ATAAGCCACTCACCCAGCCTCATCGAAGCTTTTAATTGTCCAACCTaGTTGCCCACCTCCTGTACCCCCAACCTGAAGCCCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ISHSPSLIEAFNCPT*LPTSCTPNLKPSWV
Trigger: GACCCAGCTGGGCTTCAGGTTGGGGGTACAGGAGGTGGGCAAGCAGGTTGGACAATTAAAAGCTTCGATGAGGCTGGGTGAGTGGCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GAGTGCCGGAGTCCAAATCGGTGCAACTTTACCACGAGTGAGATCTaGTTGGCCGATGCCACTGAATCCGGGTTAGAGGACGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ECRSPNRCNFTTSEI*LADATESGLEDEEE
Trigger: CTCTTCCTCGTCCTCTAACCCGGATTCAGTGGCATCGGCCAACCAGATCTCACTCGTGGTAAAGTTGCACCGATTTGGACTCCGGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATGGAATGCTGCTGTCTTaGGCTGGCACCTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHGMLLS*AGTLAS
Trigger: TGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCC...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCCCGGAATCCCTCTCTaGACTATCCATGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHPGIPL*TIHDGL
Trigger: GAGCCCATCATGGATAGTCAAGAGAGGGATTCCGGG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCATTGCTAAAAGATCAGCCTCCTTaGGCTCCTGGTTCTACCCTG +
Preference number: 5 (lower is better)
Translates to: RELHVQAGIVHHVHWPLLKDQPP*APGSTL
Trigger: CAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTTT...TAGCAATGGCCAATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 90 bp TGGTCCAGGCCCAGGGCTTCCGCATATCTGCTGTTAAACAGGATCTaGACACACTCCCGGAGCGTGTTGATGTCCTCGGTTTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: WSRPRASAYLLLNRI*THSRSVLMSSVSFM
Trigger: CATAAAGGAAACCGAGGACATCAACACGCTCCGGGAGTGTGTGCAGATCCTGTTTAACAGCAGATATGCGGAAGCCCTGGGCCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 90 bp AGGAGGAAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTaGGCTTGGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCATCAT +
Preference number: 5 (lower is better)
Translates to: RRKRRRNFLPRPAFS*AWECCCLWLAPWHH
Trigger: ATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS GCA 90 bp AGGAGGAAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTaGGCTTGGGAATGCTGCTGTCTTTGGCTGGAAGGAGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: RRKRRRNFLPRPAFS*AWECCCLWLEGGEK
Trigger: CTTTTCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS-3UTR CAA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACTCCTCAAGTGGCCTCTaGAGCTTGAAGCGGATGCGG +
Preference number: 5 (lower is better)
Translates to: IARERDKGTGLGLQVMRNSSSGL*SLKRMR
Trigger: CCGCATCCGCTTCAAGCTCAAGAGGCCACTTGAGGA...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCCACTCCCGGAGCGTGTaGATGTCCTCGGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPHSRSV*MSSVSF
Trigger: AAAGGAAACCGAGGACATCAACACGCTCCGGGAGTG...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp AAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTTaGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCATCATTGCAGA +
Preference number: 5 (lower is better)
Translates to: KRRRNFLPRPAFSCA*ECCCLWLAPWHHCR
Trigger: TCTGCAATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS CCA 90 bp AAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTTaGGAATGCTGCTGTCTTTGGCTGGAAGGAGGGGAAAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: KRRRNFLPRPAFSCA*ECCCLWLEGGEKAV
Trigger: AACAGCCTTTTCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS-3UTR CAA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGAGAAGAGAATGCGCTaGGAGGCATGGACGTTCTGG +
Preference number: 5 (lower is better)
Translates to: RHSPPCTLAIARERDKGTEKRMR*EAWTFW
Trigger: CCAGAACGTCCATGCCTCCAAGCGCATTCTCTTCTC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATAGCTTCGTGGTGTCTTaGGTAAACTTGTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PVSTPREGWATSWVRQVDSFVVS*VNLFPV
Trigger: CACAGGGAACAAGTTTACCAAAGACACCACGAAGCT...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCTGGCCGGTGGGCGTTaGGCCAAAATGTATGTTGAG +
Preference number: 5 (lower is better)
Translates to: IARERDKGTGLGLQVMRNLAGGR*AKMYVE
Trigger: CTCAACATACATTTTGGCCAAACGCCCACCGGCCAG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CCTGTGAGTACCCCACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGATTTCTGCAAAGGGTaGGAGCTGGTTAATGATGAC +
Preference number: 5 (lower is better)
Translates to: PVSTPREGWATSWVRQVDDFCKG*ELVNDD
Trigger: GTCATCATTAACCAGCTCCAACCCTTTGCAGAAATC...ATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGTGGGGTACTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACCGCTTTCTCTTGCGCTaGGGAATGCTGCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: IARERDKGTGLGLQVMRNRFLLR*GMLLSL
Trigger: CAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCG...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCAGTCCACCATGTACATaGGCCATTGCTAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPSPPCT*AIARER
Trigger: CCTCTCTCTAGCAATGGCCAATGTACATGGTGGACT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTGCTAGAGAGAGGGACAAAGGGACTGGATTAGGACTCCAGGTGATGCGGAACTCCCACTTCTCTGACTaGTCATGGACGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IARERDKGTGLGLQVMRNSHFSD*SWTMEK
Trigger: CTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGA...GTTCCGCATCACCTGGAGTCCTAATCCAGTCCCTTTGTCCCTCTCTCTAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATCGCGTCATAATTTTCTaGAAAGCCCTGTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHRVIIF*KALSLQ
Trigger: CTGAAGAGACAGGGCTTTCAAGAAAATTATGACGCG...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp GACAGAAACATCCCGAGAAATGAGAGATGCATCAGAGCTCGGCTCTaGCCTCAGTTCTGGCTCTCCTCTGCTTTTTGGCTGTGGATAAAT +
Preference number: 5 (lower is better)
Translates to: DRNIPRNERCIRARL*PQFWLSSAFWLWIN
Trigger: ATTTATCCACAGCCAAAAAGCAGAGGAGAGCCAGAACTGAGGCCAGAGCCGAGCTCTGATGCATCTCTCATTTCTCGGGATGTTTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ACGAGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATGCATCTATAACCCCACTGTGAACTTGATCTaGTCAGCCACAGCAAGAATC +
Preference number: 5 (lower is better)
Translates to: TRRMGYLLGETGGCIYNPTVNLI*SATARI
Trigger: GATTCTTGCTGTGGCTGACAAGATCAAGTTCACAGT...GGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp CGGCATAGTCCACCATGTACATTGGCCATTGCTAGAGAGAGGGACAAAGGGACTGTGTCTTTGGTAAACTaGTTCCCTGTGAAAATTCGC +
Preference number: 5 (lower is better)
Translates to: RHSPPCTLAIARERDKGTVSLVN*FPVKIR
Trigger: GCGAATTTTCACAGGGAACAAGTTTACCAAAGACAC...AGTCCCTTTGTCCCTCTCTCTAGCAATGGCCAATGTACATGGTGGACTATGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS-3UTR CAA 90 bp ATTAAGAGGTCCCGGGAGCTGCACGTTCAGGCCGGCATAGTCCACCATGTACATTGGCCAAAATGTATGTaGAGTTTGCTGCTAAATGTT +
Preference number: 5 (lower is better)
Translates to: IKRSRELHVQAGIVHHVHWPKCM*SLLLNV
Trigger: AACATTTAGCAGCAAACTCAACATACATTTTGGCCA...ATGTACATGGTGGACTATGCCGGCCTGAACGTGCAGCTCCCGGGACCTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 90 bp CCGAGAAATGAGAGATGCATCAGAGCTCGGCTCTGGCCTCAGTTCTaGCTCTCCTCTGCTTTTTGGCTGTGGATAAATATTGATTTAAAC +
Preference number: 5 (lower is better)
Translates to: PRNERCIRARLWPQF*LSSAFWLWINIDLN
Trigger: GTTTAAATCAATATTTATCCACAGCCAAAAAGCAGAGGAGAGCCAGAACTGAGGCCAGAGCCGAGCTCTGATGCATCTCTCATTTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp GACCGAGGGAGGCTACGGCCTCCACCCTCGCCCCGCTaGACCTTCTTGGGGTGCTCTGCCTCCGGATCCTTC +
Preference number: 6 (lower is better)
Translates to: DRGRLRPPPSPR*TFLGCSASGSF
Trigger: GAAGGATCCGGAGGCAGAGCACCCCAAGAAGGTGCAGCGGGGCGAGGGTGGAGGCCGTAGCCTCCCTCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp ACGCGGAGTTCCAGCGGTCGGGTCCGCAGCCGTTGGTaGGGACGTCACAGCGCTTACCCAGCAAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: TRSSSGRVRSRW*GRHSAYPARPW
Trigger: CCATGGCCTTGCTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACCCGACCGCTGGAACTCCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp CAGGATGGCCATGAGGGCCTTGGGGTCATACTCGGCTaGCCTTCGGAAGGCCAGGCCTTCGGGCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: QDGHEGLGVILG*PSEGQAFGQPL
Trigger: CAGGGGCTGCCCGAAGGCCTGGCCTTCCGAAGGCCAGCCGAGTATGACCCCAAGGCCCTCATGGCCATCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp GGACCATGGGGCTGGCACCACAAAGGGCACCAGGCCTaGGGTGTCTTCTGCCGCCATGGGTGCCCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: GPWGWHHKGHQA*GVFCRHGCPCH
Trigger: ATGGCAGGGGCACCCATGGCGGCAGAAGACACCCCAGGCCTGGTGCCCTTTGTGGTGCCAGCCCCATGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 72 bp GTGAACGCGGAGTTCCAGCGGTCGGGTCCGCAGCCGTaGGTGGGGACGTCACAGCGCTTACCCAGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: VNAEFQRSGPQP*VGTSQRLPSKA
Trigger: GGCCTTGCTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACCCGACCGCTGGAACTCCGCGTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 90 bp TCTTTGCGGGTGAACGCGGAGTTCCAGCGGTCGGGTCCGCAGCCGTaGGTGGGGACGTCACAGCGCTTACCCAGCAAGGCCATGGTCGCC +
Preference number: 6 (lower is better)
Translates to: SLRVNAEFQRSGPQP*VGTSQRLPSKAMVA
Trigger: GGCGACCATGGCCTTGCTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACCCGACCGCTGGAACTCCGCGTTCACCCGCAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS CAA 90 bp GGCACCTTGGGGGCCTGGCCATGCAGGCCACAGTCCCGTGACCCCTaGGGAATCAGGGAGACACCGTTCAGCTCCACCAGGGCCTTCGAG +
Preference number: 6 (lower is better)
Translates to: GTLGAWPCRPQSRDP*GIRETPFSSTRAFE
Trigger: CTCGAAGGCCCTGGTGGAGCTGAACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATGGCCAGGCCCCCAAGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 90 bp GGCTTCTGTCCACAACAGTCGGAGAAGTCTTGGGCACCGGTGGCCTaGGGCTCTGGCATGGGCCGACTCAGGCCCAGGTCGCTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: GFCPQQSEKSWAPVA*GSGMGRLRPRSLGA
Trigger: TGCCCCCAGCGACCTGGGCCTGAGTCGGCCCATGCCAGAGCCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTGTTGTGGACAGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp CCCAGCAAGGTCAAGGACGGTGGCCCTAGAGACCTCTaGAGAGGTGTCCTCTGGCGGGCTGGCTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PSKVKDGGPRDL*RGVLWRAGWLQ
Trigger: CTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCAGAGGTCTCTAGGGCCACCGTCCTTGACCTTGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp GGGCCTGGCCATGCAGGCCACAGTCCCGTGACCCCTTaGGAATCAGGGAGACACCGTTCAGCTCCACCAGGG +
Preference number: 6 (lower is better)
Translates to: GPGHAGHSPVTP*ESGRHRSAPPG
Trigger: CCCTGGTGGAGCTGAACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATGGCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp CACAACAGTCGGAGAAGTCTTGGGCACCGGTGGCCTTaGGCTCTGGCATGGGCCGACTCAGGCCCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: HNSRRSLGHRWP*ALAWADSGPGR
Trigger: GCGACCTGGGCCTGAGTCGGCCCATGCCAGAGCCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTGTTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 72 bp GGGGCCTGGCCATGCAGGCCACAGTCCCGTGACCCCTaGGGAATCAGGGAGACACCGTTCAGCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: GAWPCRPQSRDP*GIRETPFSSTR
Trigger: CCTGGTGGAGCTGAACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATGGCCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 72 bp CCACAACAGTCGGAGAAGTCTTGGGCACCGGTGGCCTaGGGCTCTGGCATGGGCCGACTCAGGCCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: PQQSEKSWAPVA*GSGMGRLRPRS
Trigger: CGACCTGGGCCTGAGTCGGCCCATGCCAGAGCCCAAGGCCACCGGTGCCCAAGACTTCTCCGACTGTTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS TCA 72 bp CACCTTGGGGGCCTGGCCATGCAGGCCACAGTCCCGTaGCCCCTTGGGAATCAGGGAGACACCGTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: HLGGLAMQATVP*PLGNQGDTVQL
Trigger: GAGCTGAACGGTGTCTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATGGCCAGGCCCCCAAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp GGGCCTCTCGGTTCCCCTCTATGGGCTCAGTCCCGGTaGTCTCTGTGTGGCCCCTGCTGGGTGTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: GPLGSPLWAQSR*SLCGPCWVLMA
Trigger: TGCCATCAACACCCAGCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCATAGAGGGGAACCGAGAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp AGGGGGCAGGAAGGTGCTTCCTGCTTGAGCTCTCGGATGGCGTGGTaGGGGAGCGCCGTGCTGTACAGGAAGCTGGCCATGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RGQEGASCLSSRMAW*GSAVLYRKLAMEEE
Trigger: CTCCTCCTCCATGGCCAGCTTCCTGTACAGCACGGCGCTCCCCAACCACGCCATCCGAGAGCTCAAGCAGGAAGCACCTTCCTGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp GACGGTGGCCCTAGAGACCTCTGCAGAGGTGTCCTCTaGCGGGCTGGCTGGCTCCAGCTTCGTGGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: DGGPRDLCRGVL*RAGWLQLRGVF
Trigger: AAAGACACCACGAAGCTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCAGAGGTCTCTAGGGCCACCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp TTCCCCTCTATGGGCTCAGTCCCGGTGCTCTCTGTGTaGCCCCTGCTGGGTGTTGATGGCAGAGAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: FPSMGSVPVLSV*PLLGVDGREQG
Trigger: GCCCTGCTCTCTGCCATCAACACCCAGCAGGGGCCACACAGAGAGCACCGGGACTGAGCCCATAGAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS TCA 72 bp TGGGGTTCCGGAAGGGGATGTCATCAGGCAGACCCGTaGCCTCCACGGCGTCTGGGCTGTCCCGGATTAGTT +
Preference number: 6 (lower is better)
Translates to: WGSGRGCHQADP*PPRRLGCPGLV
Trigger: AACTAATCCGGGACAGCCCAGACGCCGTGGAGGTCACGGGTCTGCCTGATGACATCCCCTTCCGGAACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS GCA 72 bp CCCTTCTCTGTGCCCACCACAAAGGCGCTCTCATCGTaGACGGCGACACAGGCCACCTCGGCGTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: PFSVPTTKALSS*TATQATSAFSL
Trigger: CAAACTGAACGCCGAGGTGGCCTGTGTCGCCGTGCACGATGAGAGCGCCTTTGTGGTGGGCACAGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp ACTGTTGCACCCCAGGATCCCGACCAGTGCCCAGTGTaGATAAGGCCCAAGGCGTGTGGTCCCAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: TVAPQDPDQCPV*IRPKACGPSHR
Trigger: TCTGTGGCTGGGACCACACGCCTTGGGCCTTATGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp CTGAGCTCTGCCGTCACATTTCTGCATCAAGCCACATaGTCCCGAGGCCAATGCCACCCCCGCCGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LSSAVTFLHQAT*SRGQCHPRRGL
Trigger: AAGGCCTCGGCGGGGGTGGCATTGGCCTCGGGAGCATGTGGCTTGATGCAGAAATGTGACGGCAGAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp GTCTCCTACCTGCAGACAGGGAGTTTCTGCACCCAATaGGGTAGGGAAGGCCCAGGCAGGAGGACCATGGGG +
Preference number: 6 (lower is better)
Translates to: VSYLQTGSFCTQ*GREGPGRRTMG
Trigger: CCCCATGGTCCTCCTGCCTGGGCCTTCCCTACCCCATTGGGTGCAGAAACTCCCTGTCTGCAGGTAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp ACGTCACAGCGCTTACCCAGCAAGGCCATGGTCGCCTaGTCTCCTGTCCCTCACTCCAGTTCCCCCTCACAC +
Preference number: 6 (lower is better)
Translates to: TSQRLPSKAMVA*SPVPHSSSPSH
Trigger: GTGTGAGGGGGAACTGGAGTGAGGGACAGGAGACCAGGCGACCATGGCCTTGCTGGGTAAGCGCTGTGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp CACATGGAGTCTAAGGCAGACACGAGGCTGGTGATGATCTCGTCTTaGCGGGTGAACGCGGAGTTCCAGCGGTCGGGTCCGCAGCCGTTG +
Preference number: 6 (lower is better)
Translates to: HMESKADTRLVMISS*RVNAEFQRSGPQPL
Trigger: CAACGGCTGCGGACCCGACCGCTGGAACTCCGCGTTCACCCGCAAAGACGAGATCATCACCAGCCTCGTGTCTGCCTTAGACTCCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 90 bp GGGTGTCTTCTGCCGCCATGGGTGCCCCTGCCATCTGTAAGCTCTTaGAGGGCAGAAACCAGGTCTGCCTGCCACTGTTGCACCCCAGGA +
Preference number: 6 (lower is better)
Translates to: GCLLPPWVPLPSVSS*RAETRSACHCCTPG
Trigger: TCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCCCTCAAAGAGCTTACAGATGGCAGGGGCACCCATGGCGGCAGAAGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp ACATTTCTGCATCAAGCCACATGCTCCCGAGGCCAATaGCACCCCCGCCGAGGCCTTCCAGCCTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: TFLHQATCSRGQ*HPRRGLPASVS
Trigger: GGAAACTGAGGCTGGAAGGCCTCGGCGGGGGTGGCATTGGCCTCGGGAGCATGTGGCTTGATGCAGAAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp CTCCTGTCCCTCACTCCAGTTCCCCCTCACACTCCATaGTCCAGGCCCTCTAAGCTGTGCCACTCCCAGATG +
Preference number: 6 (lower is better)
Translates to: LLSLTPVPPHTP*SRPSKLCHSQM
Trigger: CATCTGGGAGTGGCACAGCTTAGAGGGCCTGGAGCATGGAGTGTGAGGGGGAACTGGAGTGAGGGACAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp TCCTCAAGTGGCCTCTTGAGCTTGAAGCGGATGCGGTaGCTGTGTTCCAGGATGGCCATGAGGGCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: SSSGLLSLKRMR*LCSRMAMRALG
Trigger: CCCCAAGGCCCTCATGGCCATCCTGGAACACAGCCACCGCATCCGCTTCAAGCTCAAGAGGCCACTTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 72 bp CGCGGGGAGGCTCTTTGTTCTGTAATCCCAGTAAGATaGCCAGCCATTCGCCCCGGCCCTAATCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: RGEALCSVIPVR*PAIRPGPNPSP
Trigger: GGGGCTGGGATTAGGGCCGGGGCGAATGGCTGGCAATCTTACTGGGATTACAGAACAAAGAGCCTCCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265755.7
CDS CAA 72 bp TCTAAGGCAGACACGAGGCTGGTGATGATCTCGTCTTaGCGGGTGAACGCGGAGTTCCAGCGGTCGGGTCCG +
Preference number: 6 (lower is better)
Translates to: SKADTRLVMISS*RVNAEFQRSGP
Trigger: CGGACCCGACCGCTGGAACTCCGCGTTCACCCGCAAAGACGAGATCATCACCAGCCTCGTGTCTGCCTTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 72 bp CTCTTTGAGGGCAGAAACCAGGTCTGCCTGCCACTGTaGCACCCCAGGATCCCGACCAGTGCCCAGTGTGCA +
Preference number: 6 (lower is better)
Translates to: LFEGRNQVCLPL*HPRIPTSAQCA
Trigger: TGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCCCTCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp CCTTCCGGGCATTCAGGAACATTCTCCCCTTCTCTGTaGCCACCACAAAGGCGCTCTCATCGTGCACGGCGA +
Preference number: 6 (lower is better)
Translates to: PSGHSGTFSPSL*PPQRRSHRARR
Trigger: TCGCCGTGCACGATGAGAGCGCCTTTGTGGTGGGCACAGAGAAGGGGAGAATGTTCCTGAATGCCCGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp TCTTTGAGGGCAGAAACCAGGTCTGCCTGCCACTGTTaGACCCCAGGATCCCGACCAGTGCCCAGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: SLRAETRSACHC*TPGSRPVPSVH
Trigger: ATGCACACTGGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCCCTCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp TCTGTAAGCTCTTTGAGGGCAGAAACCAGGTCTGCCTaGCACTGTTGCACCCCAGGATCCCGACCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SVSSLRAETRSA*HCCTPGSRPVP
Trigger: GGGCACTGGTCGGGATCCTGGGGTGCAACAGTGGCAGGCAGACCTGGTTTCTGCCCTCAAAGAGCTTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp GATGTCCTCCCCTCCCTTCCGCATGCCTCTGAGCTCTaGCGTCACATTTCTGCATCAAGCCACATGCTCCCG +
Preference number: 6 (lower is better)
Translates to: DVLPSLPHASEL*RHISASSHMLP
Trigger: CGGGAGCATGTGGCTTGATGCAGAAATGTGACGGCAGAGCTCAGAGGCATGCGGAAGGGAGGGGAGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp ACAGTGTCCAGCTGGGCACCCATGAGATGCAAAGATCAGCCTCCTTaGGCTCCTGGTTCTACCCTGCCCCTCTCCTTCTTGACCCAGGGG +
Preference number: 6 (lower is better)
Translates to: TVSSWAPMRCKDQPP*APGSTLPLSFLTQG
Trigger: CCCCTGGGTCAAGAAGGAGAGGGGCAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTGGACACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp AGCCACTCACCCAGCCTCATCGAAGCTTTTAATTGTCCAACCTGCTaGCCCACCTCCTGTACCCCCAACCTGAAGCCCAGCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SHSPSLIEAFNCPTC*PTSCTPNLKPSWVR
Trigger: CCTGACCCAGCTGGGCTTCAGGTTGGGGGTACAGGAGGTGGGCAAGCAGGTTGGACAATTAAAAGCTTCGATGAGGCTGGGTGAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS TCA 72 bp CACCTCCTCTACCATCTTCCGCAGAAGGTACACATCTaGGCCATGTTCCAGGGAGGACCGAGGGAGGCTACG +
Preference number: 6 (lower is better)
Translates to: HLLYHLPQKVHI*AMFQGGPREAT
Trigger: CGTAGCCTCCCTCGGTCCTCCCTGGAACATGGCTCAGATGTGTACCTTCTGCGGAAGATGGTAGAGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp CCCCCTCACACTCCATGCTCCAGGCCCTCTAAGCTGTaGCACTCCCAGATGTACCGATGTTCATGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: PPHTPCSRPSKL*HSQMYRCSCFP
Trigger: AGGGAAGCATGAACATCGGTACATCTGGGAGTGGCACAGCTTAGAGGGCCTGGAGCATGGAGTGTGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp AGAAGGATGGGCTACCTCTTGGGTGAGACAGGTGGATaGATCTATAACCCCCGAGGCCGGAAGGTCCCCACT +
Preference number: 6 (lower is better)
Translates to: RRMGYLLGETGG*IYNPRGRKVPT
Trigger: AGTGGGGACCTTCCGGCCTCGGGGGTTATAGATGCATCCACCTGTCTCACCCAAGAGGTAGCCCATCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp ATGGAGAAGAGAATGCGCTTGGAGGCATGGACGTTCTaGATGAGAGGCCCACCAGGCCCAGTGGGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: MEKRMRLEAWTF*MRGPPGPVGFC
Trigger: ACAGAAGCCCACTGGGCCTGGTGGGCCTCTCATCCAGAACGTCCATGCCTCCAAGCGCATTCTCTTCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 90 bp TCCCACTTCTCTGACTTGTCATGGACGATGGAGAAGAGAATGCGCTaGGAGGCATGGACGTTCTGGATGAGAGGCCCACCAGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: SHFSDLSWTMEKRMR*EAWTFWMRGPPGPV
Trigger: CACTGGGCCTGGTGGGCCTCTCATCCAGAACGTCCATGCCTCCAAGCGCATTCTCTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp AGAGACCTCTGCAGAGGTGTCCTCTGGCGGGCTGGCTaGCTCCAGCTTCGTGGTGTCTTTGGTAAACTTGTT +
Preference number: 6 (lower is better)
Translates to: RDLCRGVLWRAG*LQLRGVFGKLV
Trigger: AACAAGTTTACCAAAGACACCACGAAGCTGGAGCCAGCCAGCCCGCCAGAGGACACCTCTGCAGAGGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp ACCCATGAGATGCAAAGATCAGCCTCCTTTGGCTCCTaGTTCTACCCTGCCCCTCTCCTTCTTGACCCAGGG +
Preference number: 6 (lower is better)
Translates to: THEMQRSASFGS*FYPAPLLLDPG
Trigger: CCCTGGGTCAAGAAGGAGAGGGGCAGGGTAGAACCAGGAGCCAAAGGAGGCTGATCTTTGCATCTCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp CCTTCCAGCCTCAGTTTCCCTCCTAGCCAGGAGACTTaGCATCAGGGGTATGGAAAGATACAGCAGGGCCGA +
Preference number: 6 (lower is better)
Translates to: PSSLSFPPSQET*HQGYGKIQQGR
Trigger: TCGGCCCTGCTGTATCTTTCCATACCCCTGATGCCAAGTCTCCTGGCTAGGAGGGAAACTGAGGCTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 72 bp GAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTaGCGCTTGGGAATGCTGCTGTCTTTGGCTGGCACC +
Preference number: 6 (lower is better)
Translates to: EETEFPSETRFL*RLGMLLSLAGT
Trigger: GGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS CAA 72 bp CCCAGCCTCATCGAAGCTTTTAATTGTCCAACCTGCTaGCCCACCTCCTGTACCCCCAACCTGAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PSLIEAFNCPTC*PTSCTPNLKPS
Trigger: GCTGGGCTTCAGGTTGGGGGTACAGGAGGTGGGCAAGCAGGTTGGACAATTAAAAGCTTCGATGAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp GAGGAGGAAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTaGCGCTTGGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: EEEEETEFPSETRFL*RLGMLLSLAGTLAS
Trigger: TGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS GCA 72 bp CCCAGGGCTTCCGCATATCTGCTGTTAAACAGGATCTaGACACACTCCCGGAGCGTGTTGATGTCCTCGGTT +
Preference number: 6 (lower is better)
Translates to: PRASAYLLLNRI*THSRSVLMSSV
Trigger: AACCGAGGACATCAACACGCTCCGGGAGTGTGTGCAGATCCTGTTTAACAGCAGATATGCGGAAGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS GCA 72 bp CTTCCGAGACCCGCTTTCTCTTGCGCTTGGGAATGCTaGTGTCTTTGGCTGGCACCTTGGCATCATTGCAGA +
Preference number: 6 (lower is better)
Translates to: LPRPAFSCAWEC*CLWLAPWHHCR
Trigger: TCTGCAATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS GCA 72 bp TTCCTTCCGAGACCCGCTTTCTCTTGCGCTTGGGAATaGTGCTGTCTTTGGCTGGCACCTTGGCATCATTGC +
Preference number: 6 (lower is better)
Translates to: FLPRPAFSCAWE*CCLWLAPWHHC
Trigger: GCAATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS GCA 72 bp AGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTaGGCTTGGGAATGCTGCTGTCTTTGGCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: RRRNFLPRPAFS*AWECCCLWLAP
Trigger: AGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS GCA 72 bp TCACCCAGCCTCATCGAAGCTTTTAATTGTCCAACCTaGTTGCCCACCTCCTGTACCCCCAACCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SPSLIEAFNCPT*LPTSCTPNLKP
Trigger: GGGCTTCAGGTTGGGGGTACAGGAGGTGGGCAAGCAGGTTGGACAATTAAAAGCTTCGATGAGGCTGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp TCCCAGATGTACCGATGTTCATGCTTCCCTAGTCTGTaGAGGTTCAGTTCCCGCTGCCTGAAGCACCCTTCC +
Preference number: 6 (lower is better)
Translates to: SQMYRCSCFPSL*RFSSRCLKHPS
Trigger: GGAAGGGTGCTTCAGGCAGCGGGAACTGAACCTGCACAGACTAGGGAAGCATGAACATCGGTACATCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp GAGGGCCACAGAGATGAGTGCCGGAGTCCAAATCGGTaGAACTTTACCACGAGTGAGATCTGGTTGGCCGAT +
Preference number: 6 (lower is better)
Translates to: EGHRDECRSPNR*NFTTSEIWLAD
Trigger: ATCGGCCAACCAGATCTCACTCGTGGTAAAGTTGCACCGATTTGGACTCCGGCACTCATCTCTGTGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp TTCCTTCCGAGACCCGCTTTCTCTTGCGCTTGGGAATaGTGCTGTCTTTGGCTGGAAGGAGGGGAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: FLPRPAFSCAWE*CCLWLEGGEKA
Trigger: AGCCTTTTCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS CCA 72 bp CGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTTaGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: RNFLPRPAFSCA*ECCCLWLAPWH
Trigger: ATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS CCA 72 bp CATGGCACAGGCTTCCTGGGTATGACAGTGTCCAGCTaGGCACCCATGAGATGCAAAGATCAGCCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: HGTGFLGMTVSS*APMRCKDQPPL
Trigger: CAAAGGAGGCTGATCTTTGCATCTCATGGGTGCCCAGCTGGACACTGTCATACCCAGGAAGCCTGTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp CGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTTaGGAATGCTGCTGTCTTTGGCTGGAAGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: RNFLPRPAFSCA*ECCCLWLEGGE
Trigger: TTCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS CAA 72 bp ACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTaGGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCA +
Preference number: 6 (lower is better)
Translates to: TEFPSETRFLLR*GMLLSLAGTLA
Trigger: TGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000470715.1
ENST00000476977.5
CDS CAA 72 bp ACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTaGGGAATGCTGCTGTCTTTGGCTGGAAGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: TEFPSETRFLLR*GMLLSLAGRRG
Trigger: TCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS CAA 90 bp GAAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTaGGGAATGCTGCTGTCTTTGGCTGGCACCTTGGCATCATTGCAG +
Preference number: 6 (lower is better)
Translates to: EEETEFPSETRFLLR*GMLLSLAGTLASLQ
Trigger: CTGCAATGATGCCAAGGTGCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
CDS CAA 90 bp TGCCGGAGTCCAAATCGGTGCAACTTTACCACGAGTGAGATCTGGTaGGCCGATGCCACTGAATCCGGGTTAGAGGACGAGGAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: CRSPNRCNFTTSEIW*ADATESGLEDEEEE
Trigger: TTCCTCTTCCTCGTCCTCTAACCCGGATTCAGTGGCATCGGCCAACCAGATCTCACTCGTGGTAAAGTTGCACCGATTTGGACTCCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 90 bp GAAGAGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTGCGCTaGGGAATGCTGCTGTCTTTGGCTGGAAGGAGGGGAAAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: EEETEFPSETRFLLR*GMLLSLAGRRGKGC
Trigger: ACAGCCTTTTCCCCTCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS GCA 72 bp AACCACAGGGACAGAAACATCCCGAGAAATGAGAGATaGATCAGAGCTCGGCTCTGGCCTCAGTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: NHRDRNIPRNER*IRARLWPQFWL
Trigger: GAGCCAGAACTGAGGCCAGAGCCGAGCTCTGATGCATCTCTCATTTCTCGGGATGTTTCTGTCCCTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp TCTAAGCTGTGCCACTCCCAGATGTACCGATGTTCATaGTTCCCTAGTCTGTGCAGGTTCAGTTCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SKLCHSQMYRCS*FPSLCRFSSRC
Trigger: GCAGCGGGAACTGAACCTGCACAGACTAGGGAAGCATGAACATCGGTACATCTGGGAGTGGCACAGCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS GCA 72 bp AGGAGACGGAATTTCCTTCCGAGACCCGCTTTCTCTTaGGCTTGGGAATGCTGCTGTCTTTGGCTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: RRRNFLPRPAFS*AWECCCLWLEG
Trigger: TCCTTCCAGCCAAAGACAGCAGCATTCCCAAGCGCAAGAGAAAGCGGGTCTCGGAAGGAAATTCCGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486086.1
CDS CAA 72 bp CCAAATCGGTGCAACTTTACCACGAGTGAGATCTGGTaGGCCGATGCCACTGAATCCGGGTTAGAGGACGAG +
Preference number: 6 (lower is better)
Translates to: PNRCNFTTSEIW*ADATESGLEDE
Trigger: CTCGTCCTCTAACCCGGATTCAGTGGCATCGGCCAACCAGATCTCACTCGTGGTAAAGTTGCACCGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp AGTCCAAATCGGTGCAACTTTACCACGAGTGAGATCTaGTTGGCCGATGCCACTGAATCCGGGTTAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SPNRCNFTTSEI*LADATESGLED
Trigger: GTCCTCTAACCCGGATTCAGTGGCATCGGCCAACCAGATCTCACTCGTGGTAAAGTTGCACCGATTTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CAA 72 bp TCTGGCGGGCTGGCTGGCTCCAGCTTCGTGGTGTCTTaGGTAAACTTGTTCCCTGTGAAAATTCGCTCATCA +
Preference number: 6 (lower is better)
Translates to: SGGLAGSSFVVS*VNLFPVKIRSS
Trigger: TGATGAGCGAATTTTCACAGGGAACAAGTTTACCAAAGACACCACGAAGCTGGAGCCAGCCAGCCCGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CAA 90 bp GCATATCTGCTGTTAAACAGGATCTGCACACACTCCCGGAGCGTGTaGATGTCCTCGGTTTCCTTTATGAAGGCGTCCCACTTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: AYLLLNRICTHSRSV*MSSVSFMKASHFSD
Trigger: GTCAGAGAAGTGGGACGCCTTCATAAAGGAAACCGAGGACATCAACACGCTCCGGGAGTGTGTGCAGATCCTGTTTAACAGCAGATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS CCA 72 bp GAGAGATGCATCAGAGCTCGGCTCTGGCCTCAGTTCTaGCTCTCCTCTGCTTTTTGGCTGTGGATAAATATT +
Preference number: 6 (lower is better)
Translates to: ERCIRARLWPQF*LSSAFWLWINI
Trigger: AATATTTATCCACAGCCAAAAAGCAGAGGAGAGCCAGAACTGAGGCCAGAGCCGAGCTCTGATGCATCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp TCATCAAACATCCTCTTAATGATGAAGTGGATACTATaGCGCTCCTCCAGGATCCGCTTCAGCTTGGGGACT +
Preference number: 6 (lower is better)
Translates to: SSNILLMMKWIL*RSSRIRFSLGT
Trigger: AGTCCCCAAGCTGAAGCGGATCCTGGAGGAGCGCCATAGTATCCACTTCATCATTAAGAGGATGTTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1
CDS TCA 72 bp CTGGCTCTCCTCTGCTTTTTGGCTGTGGATAAATATTaGTTTAAACAACTGGCCGGTGGGCGTTTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: LALLCFLAVDKY*FKQLAGGRLAK
Trigger: TTTGGCCAAACGCCCACCGGCCAGTTGTTTAAATCAATATTTATCCACAGCCAAAAAGCAGAGGAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476977.5
CDS CCA 72 bp AAAATTCGCTCATCAAACATCCTCTTAATGATGAAGTaGATACTATGGCGCTCCTCCAGGATCCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: KIRSSNILLMMK*ILWRSSRIRFS
Trigger: GCTGAAGCGGATCCTGGAGGAGCGCCATAGTATCCACTTCATCATTAAGAGGATGTTTGATGAGCGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265755.7
ENST00000424337.7
ENST00000455841.6
ENST00000476977.5
ENST00000489094.1