Pregenerated sensors for GTF2H3 (Homo sapiens)
Ensembl gene IDs: ENSG00000111358Ensembl transcript IDs: ENST00000228955.11, ENST00000536375.5, ENST00000537368.5, ENST00000537695.5, ENST00000538533.5, ENST00000538845.5, ENST00000539429.1, ENST00000539994.5, ENST00000542279.5, ENST00000543005.5, ENST00000543154.1, ENST00000543341.7, ENST00000543415.5, ENST00000618160.4
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTGTTTCTGTGCTGCAAAGATGACATTCATGAAGTTCATATACTaGAACGCACTGTCTTCTGCAGCCTTAATCACCAATATCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: FCFCAAKMTFMKFIY*NALSSAALITNILD Trigger: ATCAAGGATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTGCAGTATATGAACTTCATGAATGTCATCTTTGCAGCACAGAAACAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTGATGTCACAAGCCTGTTGCAACGCACTGTCTTCTaGAGCCTTAATCACCAATAT | + |
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Preference number: 2 (lower is better) Translates to: RHLRHLQVQSSRDVTSLLQRTVF*SLNHQY Trigger: ATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTG...CAACAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTATCAATGAGATTTCGATaGCAGAAGCAAGCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FLAFSTGGREILKAVSHVSMRFR*QKQAAL Trigger: CAGGGCTGCTTGCTTCTGTCATCGAAATCTCATTGA...TACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| 3UTR-3UTR GCA 90 bp | TCACAAGCCTGTTGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCATGAAGTTCATATACTaGAACGCACTGTCTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SQACWRSPESESKTQASIMKFIY*NALSSA Trigger: TGCAGAAGACAGTGCGTTGCAGTATATGAACTTCAT...GATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCAACAGGCTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTGTTTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: GGALSRSLKHRHQSKYSVFGQGS*QQSFCM Trigger: CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA...AACAGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACACATAACCAATTTCAATaGGATTTCGATGACAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GFQHWRQRNFKGCLARSTHNQFQ*DFDDRS Trigger: GCTTCTGTCATCGAAATCTCATTGAAATTGGTTATG...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| 3UTR-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCCAGAAGCACAGGATaGAAAGGATGTTTGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: PQIVPFSKATFKFRMACISRSTG*KGCLGN Trigger: ATTTCCCAAACATCCTTTTCATCCTGTGCTTCTGGA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGAAATTGCAGAATATTaGCAAACACACAGAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: FQHWRQRNFKGCLARSTNEIAEY*QTHRTD Trigger: GTCTGTTCTGTGTGTTTGTCAATATTCTGCAATTTC...ATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| 3UTR-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATCCAGAAGCACAGGATaGAAAGGATGTTTGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: IVPFSKATFKFRMACISQSRSTG*KGCLGN Trigger: ATTTCCCAAACATCCTTTTCATCCTGTGCTTCTGGA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| 3UTR TCA 72 bp | AAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTaGTGTCACAAGCCTGTTGGAGGAGCCCTGAGTCGG | + |
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Preference number: 3 (lower is better) Translates to: KASEAPSGTVLP*CHKPVGGALSR Trigger: CCGACTCAGGGCTCCTCCAACAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR GCA 72 bp | GCCTCAGCCTCCCGAGTAGCTGGAACTACAGGCACCTaGTACTTCGCATGGCTAATTTTTCTATTTTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ASASRVAGTTGT*YFAWLIFLFLV Trigger: TACTAAAAATAGAAAAATTAGCCATGCGAAGTAGCAGGTGCCTGTAGTTCCAGCTACTCGGGAGGCTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| 3UTR GCA 72 bp | TGTGCTGCAAAGATGACATTCATGAAGTTCATATACTaGAACGCACTGTCTTCTGCAGCCTTAATCACCAAT | + |
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Preference number: 3 (lower is better) Translates to: CAAKMTFMKFIY*NALSSAALITN Trigger: ATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTGCAGTATATGAACTTCATGAATGTCATCTTTGCAGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| 3UTR-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCATGACAAGCTGACTTaGACTAATAGTCATCCCATT | + |
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Preference number: 3 (lower is better) Translates to: PQIVPFSKATFKFRMACIHDKLT*TNSHPI Trigger: AATGGGATGACTATTAGTCAAAGTCAGCTTGTCATG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACATGACAAGCTGACTTaGACTAATAGTCATCCCATT | + |
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Preference number: 3 (lower is better) Translates to: IVPFSKATFKFRMACISQHDKLT*TNSHPI Trigger: AATGGGATGACTATTAGTCAAAGTCAGCTTGTCATG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CCA 90 bp | CTGAGGCACCTTCAGGTACAGTCCTCCCGTGATGTCACAAGCCTGTTGGAGGAGATGTCACAAGCCTGTTaGAGGAGCCCTGAGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRHLQVQSSRDVTSLLEEMSQAC*RSPESE Trigger: CTCCGACTCAGGGCTCCTCCAACAGGCTTGTGACAT...CTCCTCCAACAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR CCA 90 bp | CAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGATGCCTTGGGCCTGTTaGAGGAGCCCTGAGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QHWRQRNFKGCLARSTNGMPWAC*RSPESE Trigger: CTCCGACTCAGGGCTCCTCCAACAGGCCCAAGGCAT...CCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | AGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTGATGTCACAAGCCTGTTGTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RHLRHLQVQSSRDVTSLLFGQGS*QQSFCM Trigger: CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA...CAACAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCCGGCGCCGCCAAGTaGCGCACGAGGTGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACISGAAK*RTRCCD Trigger: GTCACAGCACCTCGTGCGTCACTTGGCGGCGCCGGA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAGGAATGAGGTTCTCATaGGCAATGCCTTGGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GFQHWRQRNFKGCLARSTGMRFS*AMPWAC Trigger: ACAGGCCCAAGGCATTGCTCATGAGAACCTCATTCC...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTGTGGTACAGTCCTCCCGTaGTGTCACAAGCCTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: WRSPESESKTQASIKIFCGTVLP*CHKPVG Trigger: TCCAACAGGCTTGTGACATCACGGGAGGACTGTACC...ACAGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGAGCGTCTCAAATCCTaGGCAGCCCAACGTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIERLKS*AAQRPA Trigger: CGCCGGACGTTGGGCTGCGCAGGATTTGAGACGCTC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS-3UTR CCA 90 bp | GCAAATACTGCAGAAGAGAAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGCTTTCCCCACCAAATTaGGTTGGCATCAACTACAAT | + |
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Preference number: 4 (lower is better) Translates to: ANTAEEKASEAPSGTVLPLSPPN*VGINYN Trigger: ATTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAG...CGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTTCTGCAGTATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR TCA 90 bp | CAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGTCAATGAGATTTCGATaGCAGAAGCAAGCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QHWRQRNFKGCLARSTNGSMRFR*QKQAAL Trigger: CAGGGCTGCTTGCTTCTGTCATCGAAATCTCATTGA...CCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACATTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATG | + |
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Preference number: 4 (lower is better) Translates to: GFQHWRQRNFKGCLARSTFGQGS*QQSFCM Trigger: CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCTCGGCCTCCCAAAGTaGTGGGATTGCAGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACILGLPK*WDCRGE Trigger: CTCACCCCTGCAATCCCAGCACTTTGGGAGGCCGAG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATCACTCCTGACCTCGTaGTCCACCCACCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQSLLTS*STHLGL Trigger: GAGGCCAAGGTGGGTGGATCACGAGGTCAGGAGTGA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCCAGGAGACAGAGCTTaGAGAGAGCCGAGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIPGDRA*REPSLH Trigger: GTGCAAGCTCGGCTCTCTGCAAGCTCTGTCTCCTGG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATCAGCGCAGAGCAAGTaGTGGTCAGGGGAGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQSAQSK*WSGERL Trigger: GAGACGCTCCCCTGACCACCACTTGCTCTGCGCTGA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| 3UTR CAA 72 bp | TTAGTAGAGACAGGGTTTCACCATGTTTTCACCACGTaGGGCAGGATGGTCTCAAATTTCTGCCTCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVETGFHHVFTT*GRMVSNFCLMG Trigger: ACCCATGAGGCAGAAATTTGAGACCATCCTGCCCAACGTGGTGAAAACATGGTGAAACCCTGTCTCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGGTACAGTCCTCCCGTaGTGTCACAAGCCTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIGTVLP*CHKPVG Trigger: TCCAACAGGCTTGTGACATCACGGGAGGACTGTACC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACCAGGAGACAGAGCTTaGAGAGAGCCGAGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQPGDRA*REPSLH Trigger: GTGCAAGCTCGGCTCTCTGCAAGCTCTGTCTCCTGG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCGCCCAGGCTGGAGTaGAATGGCGCAATCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACISPRLE*NGAILI Trigger: GATCAAGATTGCGCCATTGCACTCCAGCCTGGGCGA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTATGTCACAAGCCTGTTaGAGGAGCCCTGAGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIMSQAC*RSPESE Trigger: CTCCGACTCAGGGCTCCTCCAACAGGCTTGTGACAT...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGCGCAGAGCAAGTGGTaGTCAGGGGAGCGTCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQAQSKW*SGERLK Trigger: TTTGAGACGCTCCCCTGACCACCACTTGCTCTGCGC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGGTACAGTCCTCCCGTaGTGTCACAAGCCTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQGTVLP*CHKPVG Trigger: TCCAACAGGCTTGTGACATCACGGGAGGACTGTACC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGCATGCATTTCACAATaGGGACCCGGATTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIACISQ*GPGFRE Trigger: CTCCCTGAATCCGGGTCCTCATTGTGAAATGCATGC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | GAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGCTGAAATTGCAGAATGGGTTTCCAGAGGAATaGGGTTCTCATGAGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: EILKAVSHVVQMGLKLQNGFPEE*GSHEQC Trigger: GCATTGCTCATGAGAACCTCATTCCTCTGGAAACCC...ATTCTGCAATTTCAGCCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR TCA 90 bp | TTCATATACTGCAACGCACTGTCTTCTGCAGCCTTAATCACCAATATCCTTGATCAATTCATCTTCGTCTaGAACCATGGCTGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIYCNALSSAALITNILDQFIFV*NHGCPS Trigger: GCTGGGACAGCCATGGTTTCAGACGAAGATGAATTG...ATCAAGGATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTGCAGTATATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCTGATCTTGAACTCCTaGCCTTGTGATCTGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACILILNS*PCDLPA Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAAGATCAG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGCAATGGCGCAATCTTaGTCTTGGCTCACTGCAACC | + |
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Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIAMAQS*SWLTAT Trigger: GGTTGCAGTGAGCCAAGATCAAGATTGCGCCATTGC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR GCA 90 bp | ATGAATGTAGCAAAGGGCTTTGGCCAGGGATCCTGCCAGCAAAGTTTCTGTATGCGATTCATGAATAAATaGGAATTTCCCAGCACCATC | + |
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Preference number: 4 (lower is better) Translates to: MNVAKGFGQGSCQQSFCMRFMNK*EFPSTI Trigger: GATGGTGCTGGGAAATTCGCATTTATTCATGAATCG...CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTACATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR GCA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACACGATTCATGAATAAATaGGAATTTCCCAGCACCATC | + |
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Preference number: 4 (lower is better) Translates to: GFQHWRQRNFKGCLARSTRFMNK*EFPSTI Trigger: GATGGTGCTGGGAAATTCGCATTTATTCATGAATCG...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | TTCTTGGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTACAACGCACTGTCTTCTaGAGCCTTAATCACCAATAT | + |
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Preference number: 4 (lower is better) Translates to: FLAFSTGGREILKAVSHVQRTVF*SLNHQY Trigger: ATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTG...TACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | TTCTTGGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGATTCCTTTAATGCTTaGTTTCCCCACCAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: FLAFSTGGREILKAVSHVDSFNA*FPHQIG Trigger: CCCAATTTGGTGGGGAAAGCAAGCATTAAAGGAATC...TACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACILILAH*NLHLLG Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAATGTCACAAGCCTGTTaGAGGAGCCCTGAGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQMSQAC*RSPESE Trigger: CTCCGACTCAGGGCTCCTCCAACAGGCTTGTGACAT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTACTTTCCCCACCAAATTaGGTTGGCATCAACTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLAFSTGGREILKAVSHVLSPPN*VGINYN Trigger: ATTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAG...TACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAAGCCTCCCGAGTAGCTaGAACTACAGGCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQSLPSS*NYRHLL Trigger: TAGCAGGTGCCTGTAGTTCCAGCTACTCGGGAGGCT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCAGGCTGGAGTGCAATaGCGCAATCTTGATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIQAGVQ*RNLDLG Trigger: GCCAAGATCAAGATTGCGCCATTGCACTCCAGCCTG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGATAAAGTGAACGTCTaGAACCATGGCTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIDKVNV*NHGCPS Trigger: GCTGGGACAGCCATGGTTTCAGACGTTCACTTTATC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228955.11 |
||
| CDS-3UTR TCA 90 bp | CAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGTGTTGGAACGATTCATaGATAAATGCGAATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHWRQRNFKGCLARSTNGCWNDS*INANFP Trigger: TGGGAAATTCGCATTTATTCATGAATCGTTCCAACA...CCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR TCA 90 bp | AGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGCATAACCAATTTCAATaGGATTTCGATGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STGGREILKAVSHVVQMGHNQFQ*DFDDRS Trigger: GCTTCTGTCATCGAAATCTCATTGAAATTGGTTATG...CCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGCATGCATTTCACAATaGGGACCCGGATTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQACISQ*GPGFRE Trigger: CTCCCTGAATCCGGGTCCTCATTGTGAAATGCATGC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCAATTCATCTTCGTCTaGAACCATGGCTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIQFIFV*NHGCPS Trigger: GCTGGGACAGCCATGGTTTCAGACGAAGATGAATTG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACTGATCTTGAACTCCTaGCCTTGTGATCTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQLILNS*PCDLPA Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAAGATCAG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGCAATGGCGCAATCTTaGTCTTGGCTCACTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQAMAQS*SWLTAT Trigger: GGTTGCAGTGAGCCAAGATCAAGATTGCGCCATTGC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTGTTCAACGCACTGTCTTCTaGAGCCTTAATCACCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GGALSRSLKHRHQSKYSVQRTVF*SLNHQY Trigger: ATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTG...AACAGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR GCA 90 bp | GTTGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTGATTCCTTTAATGCTTaGTTTCCCCACCAAATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGALSRSLKHRHQSKYSDSFNA*FPHQIG Trigger: CCCAATTTGGTGGGGAAAGCAAGCATTAAAGGAATC...AGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATTGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQLILAH*NLHLLG Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCAA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACAGGCTGGAGTGCAATaGCGCAATCTTGATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQQAGVQ*RNLDLG Trigger: GCCAAGATCAAGATTGCGCCATTGCACTCCAGCCTG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCAATGAGATTTCGATaGCAGAAGCAAGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACISMRFR*QKQAAL Trigger: CAGGGCTGCTTGCTTCTGTCATCGAAATCTCATTGA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGAAATTGCAGAATATTaGCAAACACACAGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLAFSTGGREILKAVSHVEIAEY*QTHRTD Trigger: GTCTGTTCTGTGTGTTTGTCAATATTCTGCAATTTC...TACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACAATTCATCTTCGTCTaGAACCATGGCTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQQFIFV*NHGCPS Trigger: GCTGGGACAGCCATGGTTTCAGACGAAGATGAATTG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIFGQGS*QQSFCM Trigger: CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | GTTGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTTGTTGGAACGATTCATaGATAAATGCGAATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGGALSRSLKHRHQSKYSCWNDS*INANFP Trigger: TGGGAAATTCGCATTTATTCATGAATCGTTCCAACA...AGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATCAATGAGATTTCGATaGCAGAAGCAAGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQSMRFR*QKQAAL Trigger: CAGGGCTGCTTGCTTCTGTCATCGAAATCTCATTGA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTGTAAAGTTTCTGTATGTTaGCCCTTTATGTCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRSPESESKTQASIKIFCKVSVC*PFMSPF Trigger: GAAAGGTGACATAAAGGGTCAACATACAGAAACTTT...ACAGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATAGAAGTCTCCAAGTCTaGCATTCTTTCCAGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: FQHWRQRNFKGCLARSTNRSLQV*HSFQDI Trigger: TATATCCTGGAAAGAATGGCAGACTTGGAGACTTCT...ATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQFGQGS*QQSFCM Trigger: CATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCAACGCACTGTCTTCTaGAGCCTTAATCACCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIQRTVF*SLNHQY Trigger: ATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | TACTGCAACGCACTGTCTTCTGCAGCCTTAATCACCAATATCCTTGATTTCATTATGAAGTTCATATACTaGAACGCACTGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCNALSSAALITNILDFIMKFIY*NALSSA Trigger: TGCAGAAGACAGTGCGTTGCAGTATATGAACTTCAT...AATGAAATCAAGGATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTGCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR GCA 90 bp | GAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGCTGAAATTGCAGAATATGAAGTTCATATACTaGAACGCACTGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EILKAVSHVVQMGLKLQNMKFIY*NALSSA Trigger: TGCAGAAGACAGTGCGTTGCAGTATATGAACTTCAT...ATTCTGCAATTTCAGCCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTATGGTCTCAAATTTCTaGCTCATGGGTTCAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIMVSNF*LMGSVE Trigger: CTCTACTGAACCCATGAGGCAGAAATTTGAGACCAT...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCTTTCCCCACCAAATTaGGTTGGCATCAACTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACILSPPN*VGINYN Trigger: ATTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCGATTCATGAATAAATaGGAATTTCCCAGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIRFMNK*EFPSTI Trigger: GATGGTGCTGGGAAATTCGCATTTATTCATGAATCG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTAGAAGTCTCCAAGTCTaGCATTCTTTCCAGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIRSLQV*HSFQDI Trigger: TATATCCTGGAAAGAATGGCAGACTTGGAGACTTCT...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228955.11 ENST00000543341.7 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTATGAAGTTCATATACTaGAACGCACTGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIMKFIY*NALSSA Trigger: TGCAGAAGACAGTGCGTTGCAGTATATGAACTTCAT...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGATTCCTTTAATGCTTaGTTTCCCCACCAAATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQDSFNA*FPHQIG Trigger: CCCAATTTGGTGGGGAAAGCAAGCATTAAAGGAATC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAATGGTCTCAAATTTCTaGCTCATGGGTTCAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQMVSNF*LMGSVE Trigger: CTCTACTGAACCCATGAGGCAGAAATTTGAGACCAT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTGTTGGAACGATTCATaGATAAATGCGAATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACICWNDS*INANFP Trigger: TGGGAAATTCGCATTTATTCATGAATCGTTCCAACA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCATAACCAATTTCAATaGGATTTCGATGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIHNQFQ*DFDDRS Trigger: GCTTCTGTCATCGAAATCTCATTGAAATTGGTTATG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGAAATTGCAGAATATTaGCAAACACACAGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIEIAEY*QTHRTD Trigger: GTCTGTTCTGTGTGTTTGTCAATATTCTGCAATTTC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACGATTCATGAATAAATaGGAATTTCCCAGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQRFMNK*EFPSTI Trigger: GATGGTGCTGGGAAATTCGCATTTATTCATGAATCG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAAGAAGTCTCCAAGTCTaGCATTCTTTCCAGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQRSLQV*HSFQDI Trigger: TATATCCTGGAAAGAATGGCAGACTTGGAGACTTCT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228955.11 ENST00000543341.7 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAATGAAGTTCATATACTaGAACGCACTGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQMKFIY*NALSSA Trigger: TGCAGAAGACAGTGCGTTGCAGTATATGAACTTCAT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCGTTCAAATTTCGTATaGCATGCATTTCACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIRSNFV*HAFHNE Trigger: CTCATTGTGAAATGCATGCCATACGAAATTTGAACG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATGTTGGAACGATTCATaGATAAATGCGAATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQCWNDS*INANFP Trigger: TGGGAAATTCGCATTTATTCATGAATCGTTCCAACA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACATAACCAATTTCAATaGGATTTCGATGACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQHNQFQ*DFDDRS Trigger: GCTTCTGTCATCGAAATCTCATTGAAATTGGTTATG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGAAATTGCAGAATATTaGCAAACACACAGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQEIAEY*QTHRTD Trigger: GTCTGTTCTGTGTGTTTGTCAATATTCTGCAATTTC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAATATCTGCAAATATCTaGGGCTGTCTCAATTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQISANI*GCLNLD Trigger: GTCTAAATTGAGACAGCCTCAGATATTTGCAGATAT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAAAAGTTTCTGTATGTTaGCCCTTTATGTCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQKVSVC*PFMSPF Trigger: GAAAGGTGACATAAAGGGTCAACATACAGAAACTTT...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000618160.4 |
||
| CDS-3UTR GCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTCTTGAATGTGACTTaGTATCACAGCAAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACIFLNVT*YHSKFV Trigger: AACAAACTTGCTGTGATAGCAAGTCACATTCAAGAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACGTTCAAATTTCGTATaGCATGCATTTCACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPFSKATFKFRMACISQRSNFV*HAFHNE Trigger: CTCATTGTGAAATGCATGCCATACGAAATTTGAACG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CCA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTACTTATAAACACTTTTaGGATTCAGTCCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQIVPFSKATFKFRMACITYKHF*DSVQSF Trigger: GAAGCTTTGGACTGAATCCCAAAAGTGTTTATAAGT...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS GCA 90 bp | ACCTCAGCGCAGAGCAAGTGGTGGTCAGGGGAGCGTCTCAAATCCTaGGCAGCCCAACGTCCGGCGCCGCCAAGTGACGCACGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSAQSKWWSGERLKS*AAQRPAPPSDARGA Trigger: AGCACCTCGTGCGTCACTTGGCGGCGCCGGACGTTGGGCTGCGCAGGATTTGAGACGCTCCCCTGACCACCACTTGCTCTGCGCTGAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618160.4 |
||
| CDS TCA 90 bp | GCAGAAGAGAAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTaGTGTCACAAGCCTGCAAGACACAGGCGGCTTGCTGCCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: AEEKASEAPSGTVLP*CHKPARHRRLAAKL Trigger: GAGTTTGGCAGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
||
| CDS-3UTR CAA 90 bp | CTGAGGCACCTTCAGGTACAGTCCTCCCGTGATGTCACAAGCCTGTTGGAGGAGCCCCACCAAATTGGGTaGGCATCAACTACAATAACC | + |
|
Preference number: 5 (lower is better) Translates to: LRHLQVQSSRDVTSLLEEPHQIG*ASTTIT Trigger: GGTTATTGTAGTTGATGCCAACCCAATTTGGTGGGG...CTCCTCCAACAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS TCA 90 bp | GCGGCTTGCTGCCAAACTCGCACTTACCTAGGGTTTCCAGAGGAATaGGGTTCTCATGAGCAATGCCTTGGGCCTACAAAATCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AACCQTRTYLGFPEE*GSHEQCLGPTKSEE Trigger: CTCCTCTGATTTTGTAGGCCCAAGGCATTGCTCATGAGAACCTCATTCCTCTGGAAACCCTAGGTAAGTGCGAGTTTGGCAGCAAGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539429.1 |
||
| CDS-3UTR CAA 90 bp | GAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGCTGAAATTGCAGAATCTCATGAGCAATGCCTaGGGCCTGTTGGAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EILKAVSHVVQMGLKLQNLMSNA*GLLEEP Trigger: GGGCTCCTCCAACAGGCCCAAGGCATTGCTCATGAG...ATTCTGCAATTTCAGCCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATGCAGAGAGCCGAGCTaGCACCACTGCACCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQCREPS*HHCTPA Trigger: GGCTGGGGTGCAGTGGTGCAAGCTCGGCTCTCTGCA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS TCA 90 bp | CCAAACTCGCACTTACCTAGGGTTTCCAGAGGAATGAGGTTCTCATaGGCAATGCCTTGGGCCTACAAAATCAGAGGAGGATATGACACT | + |
|
Preference number: 5 (lower is better) Translates to: PNSHLPRVSRGMRFS*AMPWAYKIRGGYDT Trigger: AGTGTCATATCCTCCTCTGATTTTGTAGGCCCAAGGCATTGCTCATGAGAACCTCATTCCTCTGGAAACCCTAGGTAAGTGCGAGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539429.1 |
||
| CDS-3UTR CAA 90 bp | AGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGCTGAGATCTCTGATCTaGATCGGGAAGAAACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: STGGREILKAVSHVVQMGLRSLI*IGKKHP Trigger: TGGGTGTTTCTTCCCGATCAAGATCAGAGATCTCAG...CCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACACCCCACCAAATTGGGTaGGCATCAACTACAATAACC | + |
|
Preference number: 5 (lower is better) Translates to: GFQHWRQRNFKGCLARSTPHQIG*ASTTIT Trigger: GGTTATTGTAGTTGATGCCAACCCAATTTGGTGGGG...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | GGCTTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAGCTTTCCCCACCAAATaGGGTTGGCATCAACTACAA | + |
|
Preference number: 5 (lower is better) Translates to: GFQHWRQRNFKGCLARSTAFPTK*GWHQLQ Trigger: TTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAGC...TGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCCCAGGAGACAGAGCTaGCAGAGAGCCGAGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIPRRQS*QRAELA Trigger: TGCAAGCTCGGCTCTCTGCAAGCTCTGTCTCCTGGG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS GCA 90 bp | GATTCAGACACCAAGGATACAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTCACTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSDTKDTAKGFGQGS*QQSFCMLTLYVTFG Trigger: ACCAAAAGTGACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTGTATCCTTGGTGTCTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537368.5 |
||
| CDS GCA 90 bp | AGGGCATTCGTAGAAGCCAAAAGTCGTGTTTCCAGAAGTAAAGGCTaGTCAGCAGCGTCAAATGCTGTAGAGGCTAGGCAAATAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RAFVEAKSRVSRSKG*SAASNAVEARQIMN Trigger: GTTCATTATTTGCCTAGCCTCTACAGCATTTGACGCTGCTGAGCAGCCTTTACTTCTGGAAACACGACTTTTGGCTTCTACGAATGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543005.5 |
||
| CDS-3UTR CAA 90 bp | CAAATACTGCAGAAGAGAAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTGCTATCACAGCAAGTTaGTTGGAACGATTCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QILQKRRHLRHLQVQSSRAITAS*LERFMN Trigger: ATTCATGAATCGTTCCAACAAACTTGCTGTGATAGC...ACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTTCTGCAGTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR CAA 90 bp | CAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGTTCAGTTTCTTTTTCTaGGCTTTCAGCACTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHWRQRNFKGCLARSTNGFSFFF*AFSTGG Trigger: GCCTCCAGTGCTGAAAGCCAAGAAAAAGAAACTGAA...CCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | TCATTCTATGAATGTAGCAAAGGGCTTTGGCCAGGGATCCTGCCAGCAAAGTTTGCTTTCCCCACCAAATaGGGTTGGCATCAACTACAA | + |
|
Preference number: 5 (lower is better) Translates to: SFYECSKGLWPGILPAKFAFPTK*GWHQLQ Trigger: TTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAGC...AAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTACATTCATAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542279.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACCCAGGAGACAGAGCTaGCAGAGAGCCGAGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQPRRQS*QRAELA Trigger: TGCAAGCTCGGCTCTCTGCAAGCTCTGTCTCCTGGG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CAA 90 bp | TTTCAGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATTTAAATTCAGGAGGGTaGCCAGGGTCTCCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FQHWRQRNFKGCLARSTNLNSGG*PGSPKK Trigger: CTTCTTCGGAGACCCTGGCAACCCTCCTGAATTTAA...ATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS-3UTR CAA 90 bp | CAAATACTGCAGAAGAGAAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTCAAAGTTTCTGTATGTaGACCCTTTATGTCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QILQKRRHLRHLQVQSSRQSFCM*TLYVTF Trigger: AAAGGTGACATAAAGGGTCAACATACAGAAACTTTG...ACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTTCTCTTCTGCAGTATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS-3UTR CAA 90 bp | AGCACTGGAGGCAGAGAAATTTTAAAGGCTGTCTCGCACGTAGTACAAATGGGGGCTATCACAGCAAGTTaGTTGGAACGATTCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: STGGREILKAVSHVVQMGAITAS*LERFMN Trigger: ATTCATGAATCGTTCCAACAAACTTGCTGTGATAGC...CCCCATTTGTACTACGTGCGAGACAGCCTTTAAAATTTCTCTGCCTCCAGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543415.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGGCGCAATCTTGATCTaGGCTCACTGCAACCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQGAILI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCAAGATTGCGCC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
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| CDS GCA 90 bp | CTTGTTCATTCTATGAATGTAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTCACTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVHSMNVAKGFGQGS*QQSFCMLTLYVTFG Trigger: ACCAAAAGTGACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTACATTCATAGAATGAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000228955.11 ENST00000536375.5 ENST00000538533.5 ENST00000538845.5 ENST00000539994.5 ENST00000543154.1 ENST00000543341.7 ENST00000543415.5 |
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| CDS GCA 90 bp | CTTGTTCATTCTATGAATGTAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTCACCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVHSMNVAKGFGQGS*QQSFCMLTLYVTFL Trigger: AAGAAAGGTGACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTACATTCATAGAATGAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542279.5 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTAAATTCAGGAGGGTaGCCAGGGTCTCCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACILNSGG*PGSPKK Trigger: CTTCTTCGGAGACCCTGGCAACCCTCCTGAATTTAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000228955.11 ENST00000543341.7 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTGCAATGGCGCAATCTaGATCTTGGCTCACTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACICNGAI*ILAHCN Trigger: GTTGCAGTGAGCCAAGATCAAGATTGCGCCATTGCA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS GCA 90 bp | GCCTGTTTCTGTGCTGCAAAGATGACATTCATGAAGTTCATATACTaGAACGCACTGTCTTCTGCAGCCTTAATCACCAATATCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ACFCAAKMTFMKFIY*NALSSAALITNILD Trigger: ATCAAGGATATTGGTGATTAAGGCTGCAGAAGACAGTGCGTTGCAGTATATGAACTTCATGAATGTCATCTTTGCAGCACAGAAACAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543154.1 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATTAAATTCAGGAGGGTaGCCAGGGTCTCCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQLNSGG*PGSPKK Trigger: CTTCTTCGGAGACCCTGGCAACCCTCCTGAATTTAA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000228955.11 ENST00000543341.7 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCTGAGATCTCTGATCTaGATCGGGAAGAAACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACILRSLI*IGKKHP Trigger: TGGGTGTTTCTTCCCGATCAAGATCAGAGATCTCAG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCCCCACCAAATTGGGTaGGCATCAACTACAATAACC | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIPHQIG*ASTTIT Trigger: GGTTATTGTAGTTGATGCCAACCCAATTTGGTGGGG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATGCAATGGCGCAATCTaGATCTTGGCTCACTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQCNGAI*ILAHCN Trigger: GTTGCAGTGAGCCAAGATCAAGATTGCGCCATTGCA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS TCA 90 bp | CTTGAATGTGACTTGCTATCACAGCAAGTTTGTTGGAACGATTCATaGATAAATGCGAATTTCCCAGCACCATCACGGCATCTATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LECDLLSQQVCWNDS*INANFPAPSRHLCI Trigger: AATGCATAGATGCCGTGATGGTGCTGGGAAATTCGCATTTATTCATGAATCGTTCCAACAAACTTGCTGTGATAGCAAGTCACATTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000228955.11 ENST00000536375.5 ENST00000537368.5 ENST00000537695.5 ENST00000538533.5 ENST00000538845.5 ENST00000539994.5 ENST00000542279.5 ENST00000543005.5 ENST00000543341.7 ENST00000543415.5 ENST00000618160.4 |
||
| CDS GCA 90 bp | TTCTATGAATGTCTTAATTTAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTCACTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FYECLNLAKGFGQGS*QQSFCMLTLYVTFG Trigger: ACCAAAAGTGACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTAAATTAAGACATTCATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537695.5 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACTGAGATCTCTGATCTaGATCGGGAAGAAACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQLRSLI*IGKKHP Trigger: TGGGTGTTTCTTCCCGATCAAGATCAGAGATCTCAG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTCAGTTTCTTTTTCTaGGCTTTCAGCACTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIFSFFF*AFSTGG Trigger: GCCTCCAGTGCTGAAAGCCAAGAAAAAGAAACTGAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAACCCCACCAAATTGGGTaGGCATCAACTACAATAACC | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQPHQIG*ASTTIT Trigger: GGTTATTGTAGTTGATGCCAACCCAATTTGGTGGGG...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGCTTTCCCCACCAAATaGGGTTGGCATCAACTACAA | + |
|
Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQAFPTK*GWHQLQ Trigger: TTGTAGTTGATGCCAACCCAATTTGGTGGGGAAAGC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543341.7 ENST00000618160.4 |
||
| CDS-3UTR CAA 90 bp | GTTGGAGGAGCCCTGAGTCGGAGTCTAAAACACAGGCATCAATCAAAATATTCTTTTATGTCACCTTTCTaGAATGTGACTTGCTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGGALSRSLKHRHQSKYSFMSPF*NVTCYH Trigger: GTGATAGCAAGTCACATTCAAGAAAGGTGACATAAA...AGAATATTTTGATTGATGCCTGTGTTTTAGACTCCGACTCAGGGCTCCTCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000542279.5 |
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| CDS TCA 90 bp | ATGTCACAAGTTAAGATATGTTTATTACAGAAGACACCTTCTAAATaGTTCAGACACCAAGGATACAGCAAAGGGCTTTGGCCAGGGATC | + |
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Preference number: 5 (lower is better) Translates to: MSQVKICLLQKTPSK*FRHQGYSKGLWPGI Trigger: GATCCCTGGCCAAAGCCCTTTGCTGTATCCTTGGTGTCTGAATCATTTAGAAGGTGTCTTCTGTAATAAACATATCTTAACTTGTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537368.5 |
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| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTGCTATCACAGCAAGTTaGTTGGAACGATTCATGAAT | + |
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Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIAITAS*LERFMN Trigger: ATTCATGAATCGTTCCAACAAACTTGCTGTGATAGC...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAAGCTATCACAGCAAGTTaGTTGGAACGATTCATGAAT | + |
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Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQAITAS*LERFMN Trigger: ATTCATGAATCGTTCCAACAAACTTGCTGTGATAGC...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTTTCTTGAATGTGACTaGCTATCACAGCAAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIFLECD*LSQQVC Trigger: ACAAACTTGCTGTGATAGCAAGTCACATTCAAGAAA...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000228955.11 ENST00000543341.7 ENST00000618160.4 |
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| CDS-3UTR CAA 90 bp | CCACAAATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTCAAAGTTTCTGTATGTaGACCCTTTATGTCACCTTT | + |
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Preference number: 5 (lower is better) Translates to: PQIVPFSKATFKFRMACIQSFCM*TLYVTF Trigger: AAAGGTGACATAAAGGGTCAACATACAGAAACTTTG...AATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTATTTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS-3UTR CAA 90 bp | ATAGTCCCTTTTTCCAAAGCTACGTTCAAATTTCGTATGGCATGCATTTCACAATTTATGTCACCTTTCTaGAATGTGACTTGCTATCAC | + |
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Preference number: 5 (lower is better) Translates to: IVPFSKATFKFRMACISQFMSPF*NVTCYH Trigger: GTGATAGCAAGTCACATTCAAGAAAGGTGACATAAA...TTGTGAAATGCATGCCATACGAAATTTGAACGTAGCTTTGGAAAAAGGGACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS GCA 72 bp | CAGAGCAAGTGGTGGTCAGGGGAGCGTCTCAAATCCTaGGCAGCCCAACGTCCGGCGCCGCCAAGTGACGCA | + |
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Preference number: 6 (lower is better) Translates to: QSKWWSGERLKS*AAQRPAPPSDA Trigger: TGCGTCACTTGGCGGCGCCGGACGTTGGGCTGCGCAGGATTTGAGACGCTCCCCTGACCACCACTTGCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618160.4 |
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| CDS TCA 72 bp | AAGGCATCTGAGGCACCTTCAGGTACAGTCCTCCCGTaGTGTCACAAGCCTGCAAGACACAGGCGGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: KASEAPSGTVLP*CHKPARHRRLA Trigger: AGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS GCA 72 bp | CCCGTGATGTCACAAGCCTGCAAGACACAGGCGGCTTaGTGCCAAACTCGCACTTACCTAGGGTTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PVMSQACKTQAA*CQTRTYLGFPE Trigger: CTCTGGAAACCCTAGGTAAGTGCGAGTTTGGCAGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS GCA 72 bp | ACCTTCAGGTACAGTCCTCCCGTGATGTCACAAGCCTaGAAGACACAGGCGGCTTGCTGCCAAACTCGCACT | + |
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Preference number: 6 (lower is better) Translates to: TFRYSPPVMSQA*KTQAACCQTRT Trigger: AGTGCGAGTTTGGCAGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS CAA 90 bp | GTACAGTCCTCCCGTGATGTCACAAGCCTGCAAGACACAGGCGGCTaGCTGCCAAACTCGCACTTACCTAGGGTTTCCAGAGGAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VQSSRDVTSLQDTGG*LPNSHLPRVSRGMR Trigger: CCTCATTCCTCTGGAAACCCTAGGTAAGTGCGAGTTTGGCAGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGGAGGACTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS CAA 72 bp | TCCCGTGATGTCACAAGCCTGCAAGACACAGGCGGCTaGCTGCCAAACTCGCACTTACCTAGGGTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRDVTSLQDTGG*LPNSHLPRVSR Trigger: TCTGGAAACCCTAGGTAAGTGCGAGTTTGGCAGCAAGCCGCCTGTGTCTTGCAGGCTTGTGACATCACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS TCA 72 bp | ATCGGGAAGAAACACCCACTAGGGTTTCCAGAGGAATaGGGTTCTCATGAGCAATGCCTTGGGCCTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: IGKKHPLGFPEE*GSHEQCLGPVG Trigger: TCCAACAGGCCCAAGGCATTGCTCATGAGAACCTCATTCCTCTGGAAACCCTAGTGGGTGTTTCTTCCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543415.5 |
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| CDS TCA 72 bp | ATCGGGAAGAAACACCCACTAGGGTTTCCAGAGGAATaGGGTTCTCATGAGCAATGCCTTGGGCCAATATCC | + |
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Preference number: 6 (lower is better) Translates to: IGKKHPLGFPEE*GSHEQCLGPIS Trigger: GGATATTGGCCCAAGGCATTGCTCATGAGAACCTCATTCCTCTGGAAACCCTAGTGGGTGTTTCTTCCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538533.5 |
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| CDS TCA 72 bp | TGCCAAACTCGCACTTACCTAGGGTTTCCAGAGGAATaGGGTTCTCATGAGCAATGCCTTGGGCCTACAAAA | + |
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Preference number: 6 (lower is better) Translates to: CQTRTYLGFPEE*GSHEQCLGPTK Trigger: TTTTGTAGGCCCAAGGCATTGCTCATGAGAACCTCATTCCTCTGGAAACCCTAGGTAAGTGCGAGTTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539429.1 |
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| CDS GCA 72 bp | ACCAAGGATACAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: TKDTAKGFGQGS*QQSFCMLTLYV Trigger: GACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTGTATCCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537368.5 |
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| CDS GCA 72 bp | GTAGAAGCCAAAAGTCGTGTTTCCAGAAGTAAAGGCTaGTCAGCAGCGTCAAATGCTGTAGAGGCTAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: VEAKSRVSRSKG*SAASNAVEARQ Trigger: TTGCCTAGCCTCTACAGCATTTGACGCTGCTGAGCAGCCTTTACTTCTGGAAACACGACTTTTGGCTTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543005.5 |
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| CDS CAA 72 bp | TGCGAATTTCCCAGCACCATCACGGCATCTATGCATTaGGATAAAGTGAACTGTAGTCCCAAGTACTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: CEFPSTITASMH*DKVNCSPKYSG Trigger: TCCCGAGTACTTGGGACTACAGTTCACTTTATCCAAATGCATAGATGCCGTGATGGTGCTGGGAAATTCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538845.5 |
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| CDS GCA 72 bp | TCTATGAATGTAGCAAAGGGCTTTGGCCAGGGATCCTaGCAGCAAAGTTTCTGTATGTTGACCCTTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: SMNVAKGFGQGS*QQSFCMLTLYV Trigger: GACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAAGCCCTTTGCTACATTCATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000228955.11 ENST00000536375.5 ENST00000538533.5 ENST00000538845.5 ENST00000539994.5 ENST00000542279.5 ENST00000543154.1 ENST00000543341.7 ENST00000543415.5 ENST00000618160.4 |
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| CDS CAA 72 bp | TTTGGCCAGGGATCCTGCCAGCAAAGTTTCTGTATGTaGACCCTTTATGTCACCTTTCTTGAATGTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: FGQGSCQQSFCM*TLYVTFLECDL Trigger: CAAGTCACATTCAAGAAAGGTGACATAAAGGGTCAACATACAGAAACTTTGCTGGCAGGATCCCTGGCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542279.5 ENST00000618160.4 |
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| CDS TCA 72 bp | GACTTGCTATCACAGCAAGTTTGTTGGAACGATTCATaGATAAATGCGAATTTCCCAGCACCATCACGGCAT | + |
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Preference number: 6 (lower is better) Translates to: DLLSQQVCWNDS*INANFPAPSRH Trigger: ATGCCGTGATGGTGCTGGGAAATTCGCATTTATTCATGAATCGTTCCAACAAACTTGCTGTGATAGCAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000228955.11 ENST00000536375.5 ENST00000537368.5 ENST00000537695.5 ENST00000538533.5 ENST00000538845.5 ENST00000539994.5 ENST00000542279.5 ENST00000543005.5 ENST00000543341.7 ENST00000543415.5 ENST00000618160.4 |
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| CDS GCA 72 bp | ATCACAGCAAGTTTGTTGGAACGATTCATGAATAAATaGGAATTTCCCAGCACCATCACGGCATCTATGCAT | + |
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Preference number: 6 (lower is better) Translates to: ITASLLERFMNK*EFPSTITASMH Trigger: ATGCATAGATGCCGTGATGGTGCTGGGAAATTCGCATTTATTCATGAATCGTTCCAACAAACTTGCTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000228955.11 ENST00000536375.5 ENST00000537368.5 ENST00000537695.5 ENST00000538533.5 ENST00000538845.5 ENST00000539994.5 ENST00000542279.5 ENST00000543005.5 ENST00000543341.7 ENST00000543415.5 ENST00000618160.4 |
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| CDS TCA 72 bp | GTTAAGATATGTTTATTACAGAAGACACCTTCTAAATaGTTCAGACACCAAGGATACAGCAAAGGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VKICLLQKTPSK*FRHQGYSKGLW Trigger: CCAAAGCCCTTTGCTGTATCCTTGGTGTCTGAATCATTTAGAAGGTGTCTTCTGTAATAAACATATCTTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537368.5 |
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