Pregenerated sensors for GTF2H2C_2 (Homo sapiens)
Ensembl gene IDs: ENSG00000274675Ensembl transcript IDs: ENST00000612324.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGCAGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTAGCACTTTGAGAGGCTaGGGCGGGCTGATCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SAGNRSVQTKYFISWPLCSTLRG*GGLITR Trigger: CCTTGTGATCAGCCCGCCTCAGCCTCTCAAAGTGCT...ACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTTCAAGCTACTCAGGAGGCTaGGGCAGGGAATCGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: AGNRSVQTKYFISWPLCSSYSGG*GRESLE Trigger: TTCAAGCGATTCCCTGCCTCAGCCTCCTGAGTAGCT...TGAACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTCACTGCACTCTAGCCTaGCGACAGAGCAAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: SAGNRSVQTKYFISWPLCHCTLA*RQSKTP Trigger: TGGAGTCTTGCTCTGTCGCCAGGCTAGAGTGCAGTG...ACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR-3UTR TCA 90 bp | CAAAATACTTCATTTCCTGGCCACTTTGTTCATGGATGGGCAGATCGTAACTCAACAAGGTCAAGAGATTaGGACCATACTGGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: QNTSFPGHFVHGWADRNSTRSRD*DHTGQH Trigger: ATGTTGGCCAGTATGGTCTCAATCTCTTGACCTTGT...TGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR TCA 72 bp | AGGGAATCGCTTGAACCCGTGAGGCGGACTTTGCAGTaGTCCGAAATTGTGCCACTGCACTCTAGCCTGGCG | + |
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Preference number: 3 (lower is better) Translates to: RESLEPVRRTLQ*SEIVPLHSSLA Trigger: CGCCAGGCTAGAGTGCAGTGGCACAATTTCGGATCACTGCAAAGTCCGCCTCACGGGTTCAAGCGATTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR TCA 72 bp | AACTCAGGCCAATCAGAGTTCTCCCTAGACGTGTGCTaGAGCTATAGGCTACGGGTACAATGTAGAACTGGG | + |
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Preference number: 3 (lower is better) Translates to: NSGQSEFSLDVC*SYRLRVQCRTG Trigger: CCCAGTTCTACATTGTACCCGTAGCCTATAGCTTCAGCACACGTCTAGGGAGAACTCTGATTGGCCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR CCA 72 bp | AGTTCATGTGGTGCTGACCCTACTTCTATCCTGCTCTaGGCATCAGCAGGCAATCGAAGCGTACAAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: SSCGADPTSILL*ASAGNRSVQTK Trigger: TTTTGTTTGTACGCTTCGATTGCCTGCTGATGCCCAGAGCAGGATAGAAGTAGGGTCAGCACCACATGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR-3UTR CAA 90 bp | TCATTTCCTGGCCACTTTGTTCATGGATGGGCAGATCGTAACTCAGGCCAATCACACAAGGTCAAGAGATaGAGACCATACTGGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: SFPGHFVHGWADRNSGQSHKVKR*RPYWPT Trigger: TGTTGGCCAGTATGGTCTCAATCTCTTGACCTTGTG...TGATTGGCCTGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| 3UTR CCA 72 bp | CAAAATACTTCATTTCCTGGCCACTTTGTTCATGGATaGGCAGATCGTAACTCAGGCCAATCAGAGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QNTSFPGHFVHG*ADRNSGQSEFS Trigger: GGAGAACTCTGATTGGCCTGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| CDS-3UTR CCA 90 bp | GCAGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTTCATCCATAGAAAACTGCTaGGGCCGGGCATGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGNRSVQTKYFISWPLCSSIENC*GRAWWL Trigger: CAGCCACCATGCCCGGCCCCAGCAGTTTTCTATGGA...TGAACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| CDS-3UTR CCA 90 bp | CAAAATACTTCATTTCCTGGCCACTTTGTTCATGGATGGGCAGATCGTAACTCACACTGCACTCTAGCCTaGCGACAGAGCAAGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: QNTSFPGHFVHGWADRNSHCTLA*RQSKTP Trigger: TGGAGTCTTGCTCTGTCGCCAGGCTAGAGTGCAGTG...TGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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| CDS-3UTR CCA 90 bp | TCAGCAGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTACTTCTATCCTGCTCTaGGCATCAGCAGGCAATCGA | + |
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Preference number: 4 (lower is better) Translates to: SAGNRSVQTKYFISWPLCTSILL*ASAGNR Trigger: TCGATTGCCTGCTGATGCCCAGAGCAGGATAGAAGT...ACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612324.1 |
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