Pregenerated sensors for GTF2H1 (Homo sapiens)
Ensembl gene IDs: ENSG00000110768Ensembl transcript IDs: ENST00000453096.6, ENST00000524753.4, ENST00000525831.5, ENST00000532227.1, ENST00000534213.5, ENST00000607664.1, ENST00000672072.1, ENST00000672200.1, ENST00000672827.1, ENST00000673398.1, ENST00000673424.1, ENST00000673545.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTAACAGGCTAGAGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTaGGGAAATACTCTTTGTAATGCTATACACTTTAAGCCAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: ANRLESMESWLASQS*GNTLCNAIHFKPNA Trigger: AGCATTTGGCTTAAAGTGTATAGCATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACTCTAGCCTGTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| 3UTR CCA 72 bp | ATAAAAATGGCTAACAGGCTAGAGTCAATGGAAAGTTaGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: IKMANRLESMES*LASQSWGNTLC Trigger: ACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACTCTAGCCTGTTAGCCATTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGTTGCCCATACCCTTTTaGCTGCTGGCTGAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMLPIPF*LLAESS Trigger: ACTGCTTTCAGCCAGCAGTCAAAAGGGTATGGGCAA...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGCAATGGAAAGTTGGCTaGCAAGCCAAAGCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMQWKVG*QAKAGE Trigger: TTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTG...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGGAGTCAATGGAAAGTTaGCTGGCAAGCCAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMESMES*LASQSW Trigger: CCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACTC...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGCTGGCAAGCCAAAGCTaGGGAAATACTCTTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMLASQS*GNTLCN Trigger: ATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAG...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGAGGTACAAAATAGCGTaGCAAAGTTGCAGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMRYKIA*QSCRRR Trigger: TCTTCTCCTGCAACTTTGCCACGCTATTTTGTACCT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGGTATTTGGAGAAACTTaGGCCCCAAATGGTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMVFGET*APNGSY Trigger: ATATGAACCATTTGGGGCTCAAGTTTCTCCAAATAC...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGATGCTAGGTTTAACATaGGGGCCAATTCACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMMLGLT*GPIHFL Trigger: AAGAAAGTGAATTGGCCCTCATGTTAAACCTAGCAT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGTTAATACACATTGCCTaGCTGCTCTCTAAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMLIHIA*LLSKKA Trigger: AGCTTTCTTAGAGAGCAGTCAGGCAATGTGTATTAA...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGATTGCCTCTGTTGAATaGAGATTTTATTCCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMIASVE*RFYSQR Trigger: TCTCTGGGAATAAAATCTTCATTCAACAGAGGCAAT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR GCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGTACACATTGCCTGACTaGTCTCTAAGAAAGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMYTLPD*SLRKLY Trigger: ATAAAGCTTTCTTAGAGAGCAGTCAGGCAATGTGTA...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR GCA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGAGCGTATACAGTACTTaGAGTCACATAAAGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: SQWKVGWQAKAGEILFVMSVYST*SHIKYL Trigger: CAAATACTTTATGTGACTGCAAGTACTGTATACGCT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS CCA 90 bp | TCTCGAGCGGCGAAGGGTCCTGGGATCCTGGCTGGCCCAACCATTTaGCCTAGAGCTCCTCCGGTTCCAGTCGGCGCCGTGTCTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SRAAKGPGILAGPTI*PRAPPVPVGAVSPA Trigger: GGCTGGAGACACGGCGCCGACTGGAACCGGAGGAGCTCTAGGCCAAATGGTTGGGCCAGCCAGGATCCCAGGACCCTTCGCCGCTCGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453096.6 ENST00000672827.1 |
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| CDS CCA 90 bp | TCGTTTCCTCTCTCCGGTCTCGAGCGGCGAAGGGTCCTGGGATCCTaGCTGGCCCAACCATTTGGCCTAGAGCTCCTCCGGTTCCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: SFPLSGLERRRVLGS*LAQPFGLELLRFQS Trigger: CGACTGGAACCGGAGGAGCTCTAGGCCAAATGGTTGGGCCAGCCAGGATCCCAGGACCCTTCGCCGCTCGAGACCGGAGAGAGGAAACGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453096.6 ENST00000672827.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGAGAGTCAATGGAAAGTaGGCTGGCAAGCCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMRVNGK*AGKPKL Trigger: CAGCTTTGGCTTGCCAGCCAACTTTCCATTGACTCT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS TCA 90 bp | GTGAATGCCTTCTGTGATTTCCAGGTTTTTCTTGAGTGTATTCCTTaGGTGGCAAACACTTCTTCCCAGGAGAACTCAGGTGGAAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: VNAFCDFQVFLECIP*VANTSSQENSGGSY Trigger: GTAGCTTCCACCTGAGTTCTCCTGGGAAGAAGTGTTTGCCACTCAAGGAATACACTCAAGAAAAACCTGGAAATCACAGAAGGCATTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000525831.5 ENST00000672072.1 |
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| CDS CCA 90 bp | ATGCCTTCTGTGATTTCCAGGTTTTTCTTGAGTGTATTCCTTGAGTaGCAAACACTTCTTCCCAGGAGAACTCAGGTGGAAGCTACAACT | + |
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Preference number: 5 (lower is better) Translates to: MPSVISRFFLSVFLE*QTLLPRRTQVEATT Trigger: AGTTGTAGCTTCCACCTGAGTTCTCCTGGGAAGAAGTGTTTGCCACTCAAGGAATACACTCAAGAAAAACCTGGAAATCACAGAAGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000525831.5 ENST00000672072.1 ENST00000672827.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGGCTGGGCTCACTAGTTaGTTCATTTTGTGCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMAGLTS*FILCFL Trigger: CAAGAAGCACAAAATGAACAAACTAGTGAGCCCAGC...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS CCA 90 bp | ATGCCTTCTGTGATTTCCAGGTTTTTCTTGAGTGTATTCCTTGAGTaGCAAACACTTCTTCCCAGGAGAACTCAATCTGTTGCACTGCTA | + |
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Preference number: 5 (lower is better) Translates to: MPSVISRFFLSVFLE*QTLLPRRTQSVALL Trigger: TAGCAGTGCAACAGATTGAGTTCTCCTGGGAAGAAGTGTTTGCCACTCAAGGAATACACTCAAGAAAAACCTGGAAATCACAGAAGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000534213.5 ENST00000672200.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGTTCATTTTGTGCTTCTaGTTTTCTGAGTCCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMFILCF*FSESSC Trigger: GCAGCTGGACTCAGAAAACAAGAAGCACAAAATGAA...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGAGTATTTGGAGAAACTaGAGCCCCAAATGGTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMSIWRN*SPKWFI Trigger: TATGAACCATTTGGGGCTCAAGTTTCTCCAAATACT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGAATAGCGTGGCAAAGTaGCAGGAGAAGAATAAATAC | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMNSVAK*QEKNKY Trigger: GTATTTATTCTTCTCCTGCAACTTTGCCACGCTATT...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGGGTTTTTCTGTCATATaGCCTCTGTTGAATGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMGFSVI*PLLNED Trigger: ATCTTCATTCAACAGAGGCAATATGACAGAAAAACC...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS-3UTR CAA 90 bp | AGTCAATGGAAAGTTGGCTGGCAAGCCAAAGCTGGGGAAATACTCTTTGTAATGCCCATACTCTCTTTATaGAAAGATAACCGTTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: SQWKVGWQAKAGEILFVMPILSL*KDNRLA Trigger: TGCTAAACGGTTATCTTTCAATAAAGAGAGTATGGG...CATTACAAAGAGTATTTCCCCAGCTTTGGCTTGCCAGCCAACTTTCCATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS CCA 90 bp | CAAATGGTCAATTGTCTCACAGCTAATTTGCCTGGTAAATTTTCCTaGTCATCTGTAGCACCTCTTAATTGTTCAAGGACCAATTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QMVNCLTANLPGKFS*SSVAPLNCSRTNFR Trigger: CCTGAAATTGGTCCTTGAACAATTAAGAGGTGCTACAGATGACCAGGAAAATTTACCAGGCAAATTAGCTGTGAGACAATTGACCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000534213.5 ENST00000672200.1 ENST00000672827.1 |
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| CDS GCA 90 bp | TTAGTTAGAAGAACTGAGTCACAGGAAATAAGCGTATACAGTACTTaGAGTCACATAAAGTATTTGGAGAAACTTGAGCCCCAAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: LVRRTESQEISVYST*SHIKYLEKLEPQMV Trigger: AACCATTTGGGGCTCAAGTTTCTCCAAATACTTTATGTGACTGCAAGTACTGTATACGCTTATTTCCTGTGACTCAGTTCTTCTAACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS TCA 72 bp | GGGCCCTGGGCACGTGACTCAAGAGCGCGGCCGCCATaGCACCTTCCGCTAGTTCCCTCCCTCCCCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: GPWARDSRARPP*HLPLVPSLPHG Trigger: CCCGTGGGGGAGGGAGGGAACTAGCGGAAGGTGTCATGGCGGCCGCGCTCTTGAGTCACGTGCCCAGGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000453096.6 ENST00000672827.1 |
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| CDS CCA 72 bp | CTCTCCGGTCTCGAGCGGCGAAGGGTCCTGGGATCCTaGCTGGCCCAACCATTTGGCCTAGAGCTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSGLERRRVLGS*LAQPFGLELLR Trigger: CCGGAGGAGCTCTAGGCCAAATGGTTGGGCCAGCCAGGATCCCAGGACCCTTCGCCGCTCGAGACCGGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453096.6 ENST00000672827.1 |
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| CDS CCA 72 bp | CCATGGTGGCTAGAAGGTGCGAACATTGGGCACAAATaGTCAATTGTCTCACAGCTAATTTGCCTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: PWWLEGANIGHK*SIVSQLICLVN Trigger: ATTTACCAGGCAAATTAGCTGTGAGACAATTGACCATTTGTGCCCAATGTTCGCACCTTCTAGCCACCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000534213.5 ENST00000672200.1 ENST00000672827.1 |
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| CDS CAA 72 bp | CATTGGGCACAAATGGTCAATTGTCTCACAGCTAATTaGCCTGGTAAATTTTCCTGGTCATCTGTAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: HWAQMVNCLTAN*PGKFSWSSVAP Trigger: AGGTGCTACAGATGACCAGGAAAATTTACCAGGCAAATTAGCTGTGAGACAATTGACCATTTGTGCCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000534213.5 ENST00000672200.1 ENST00000672827.1 |
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| CDS CAA 90 bp | AGGTGCGAACATTGGGCACAAATGGTCAATTGTCTCACAGCTAATTaGCCTGGTAAATTTTCCTGGTCATCTGTAGCACCTCTTAATTGT | + |
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Preference number: 6 (lower is better) Translates to: RCEHWAQMVNCLTAN*PGKFSWSSVAPLNC Trigger: ACAATTAAGAGGTGCTACAGATGACCAGGAAAATTTACCAGGCAAATTAGCTGTGAGACAATTGACCATTTGTGCCCAATGTTCGCACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000534213.5 ENST00000672200.1 ENST00000672827.1 |
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| CDS GCA 72 bp | AGAACTGAGTCACAGGAAATAAGCGTATACAGTACTTaGAGTCACATAAAGTATTTGGAGAAACTTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RTESQEISVYST*SHIKYLEKLEP Trigger: GGGCTCAAGTTTCTCCAAATACTTTATGTGACTGCAAGTACTGTATACGCTTATTTCCTGTGACTCAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524753.4 ENST00000673424.1 |
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| CDS CCA 72 bp | AATTGTCTCACAGCTAATTTGCCTGGTAAATTTTCCTaGTCATCTGTAGCACCTCTTAATTGTTCAAGGACC | + |
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Preference number: 6 (lower is better) Translates to: NCLTANLPGKFS*SSVAPLNCSRT Trigger: GGTCCTTGAACAATTAAGAGGTGCTACAGATGACCAGGAAAATTTACCAGGCAAATTAGCTGTGAGACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000453096.6 ENST00000534213.5 ENST00000672200.1 ENST00000672827.1 |
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| CDS TCA 72 bp | CCTAAGTGTCCAACCACAGAGGGCTGGTTAAATACATaGTTGTATATTCATTTAGTGGAGTATTATGCAACT | + |
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Preference number: 6 (lower is better) Translates to: PKCPTTEGWLNT*LYIHLVEYYAT Trigger: AGTTGCATAATACTCCACTAAATGAATATACAATCATGTATTTAACCAGCCCTCTGTGGTTGGACACTTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532227.1 ENST00000673398.1 |
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| CDS CCA 72 bp | CTGTCTCAGAAATTAACACTTATAATGTCTAGAGGGTaGCAAGTTAAATACCAGTGTCTATCAGAGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSQKLTLIMSRG*QVKYQCLSEIN Trigger: GTTTATCTCTGATAGACACTGGTATTTAACTTGCCACCCTCTAGACATTATAAGTGTTAATTTCTGAGACAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607664.1 ENST00000673545.1 |
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