Pregenerated sensors for GTF2F2 (Homo sapiens)
Ensembl gene IDs: ENSG00000188342Ensembl transcript IDs: ENST00000340473.8, ENST00000494087.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCAAGTATCAGCGCCTTTTaGATAGCATCGCTGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: FSCKHYGNLGICYFLIAASISAF*IASLLV Trigger: GACTAGCAGCGATGCTATGCAAAAGGCGCTGATACT...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCAGGGGCAAGCCAGTTTTaGGAAGCTTATAATCTGACT | + |
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Preference number: 2 (lower is better) Translates to: FSCKHYGNLGICYFLIAAGASQF*EAYNLT Trigger: AGTCAGATTATAAGCTTCTCAAAACTGGCTTGCCCC...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGATCACCTGTTTAAAAGACTATACAATTCTCCTTaGATCTGTATTACCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLTLSMNTKRDHLFKRLYNSP*ICITSA Trigger: AGCTGAGGTAATACAGATCCAAGGAGAATTGTATAG...TCTTTTAAACAGGTGATCACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCCAGTATCAGCGCCTTTaGCATAGCATCGCTGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: TDHDPAHFSSQHHYGKISQYQRL*HSIAAS Trigger: ACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR TCA 72 bp | TCTCGGCTGGACCCCTACGCCCATCTTTTGATTTGCTaGTATCATTTGCCATGTGATGGTCAATACATGTCT | + |
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Preference number: 3 (lower is better) Translates to: SRLDPYAHLLIC*YHLPCDGQYMS Trigger: AGACATGTATTGACCATCACATGGCAAATGATATCAGCAAATCAAAAGATGGGCGTAGGGGTCCAGCCGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR TCA 72 bp | CGCCCATCTTTTGATTTGCTGATATCATTTGCCATGTaGTGGTCAATACATGTCTGCTGGGTAAGCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: RPSFDLLISFAM*WSIHVCWVSSK Trigger: TTTACTGCTTACCCAGCAGACATGTATTGACCATCACATGGCAAATGATATCAGCAAATCAAAAGATGGGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGGCTATACAATTCTCCTaGGATCTGTATTACCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLAIQFS*DLYYLS Trigger: GCTGAGGTAATACAGATCCAAGGAGAATTGTATAGC...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | CAGTATCAGCGCCTTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATGCTGCAGGAGCCGCAGGGCTaGGGAGCGGGCGTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QYQRLLHSIAASRFTSMLQEPQG*GAGVRN Trigger: GTTCCGGACGCCCGCTCCTCAGCCCTGCGGCTCCTG...CAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | CAGTATCAGCGCCTTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATGCTGAAGGACAAGCCGCGCTaGGAGGCGAAGAGCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QYQRLLHSIAASRFTSMLKDKPR*EAKSRR Trigger: ACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTT...CAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCCAGCCGGTGGAGGCGTaGGGGATGCAGCAGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: TDHDPAHFSSQHHYGKISQPVEA*GMQQRP Trigger: GGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTG...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCAGCTCGGCCATGGGTCTaGAGCCGGTGGAGGCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: FSCKHYGNLGICYFLIAAARPWV*SRWRRA Trigger: CGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGC...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGCCCCGCGCTCGGCCATaGGTCTGCAGCCGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLPRARP*VCSRWR Trigger: CCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGG...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATATGGGTCTGCAGCCGGTaGAGGCGTGCGGGATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKIWVCSR*RRAGCS Trigger: GCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCA...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | GTCTCGGCTGGACCCCTACGCCCATCTTTTGATTTGCTGATATCATTTGCCATGACCTCAGTCCTTCCTTaGGTCTTGGCAATCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VSAGPLRPSFDLLISFAMTSVLP*VLAIRS Trigger: ACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGT...CATGGCAAATGATATCAGCAAATCAAAAGATGGGCGTAGGGGTCCAGCCGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | CAGTATCAGCGCCTTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATGCTGGGCAACTTGGGCATTTaGTACTTCTTGATTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QYQRLLHSIAASRFTSMLGNLGI*YFLIAA Trigger: TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCC...CAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | CAGTATCAGCGCCTTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATGCTGGAGAAGCTTATAATCTaGCTGGGGGAGACATATCTT | + |
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Preference number: 4 (lower is better) Translates to: QYQRLLHSIAASRFTSMLEKLII*LGETYL Trigger: AAGATATGTCTCCCCCAGTCAGATTATAAGCTTCTC...CAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATACTCCTGTGTTCTGTTTaGCGCCGGTCAAGTCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKILLCSV*RRSSRV Trigger: AACTCGACTTGACCGGCGCCAAACAGAACACAGGAG...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAGTTTTCTGTCTCGGCTaGACCCCTACGCCCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKIVFCLG*TPTPIF Trigger: AAAGATGGGCGTAGGGGTCCAGCCGAGACAGAAAAC...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | GTCTCGGCTGGACCCCTACGCCCATCTTTTGATTTGCTGATATCATTTGCCATGAACAACTTTTCCCTGTaGTTAGTTCACTTAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VSAGPLRPSFDLLISFAMNNFSL*LVHLSF Trigger: GAAGCTTAAGTGAACTAAGCACAGGGAAAAGTTGTT...CATGGCAAATGATATCAGCAAATCAAAAGATGGGCGTAGGGGTCCAGCCGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | GTCTCGGCTGGACCCCTACGCCCATCTTTTGATTTGCTGATATCATTTGCCATGTTTGCTGATATCATTTaGCATGTGATGGTCAATACA | + |
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Preference number: 4 (lower is better) Translates to: VSAGPLRPSFDLLISFAMFADII*HVMVNT Trigger: TGTATTGACCATCACATGGCAAATGATATCAGCAAA...CATGGCAAATGATATCAGCAAATCAAAAGATGGGCGTAGGGGTCCAGCCGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAGGGGCAAGCCAGTTTTaGGAAGCTTATAATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKIGASQF*EAYNLT Trigger: AGTCAGATTATAAGCTTCTCAAAACTGGCTTGCCCC...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCGCATTTGCTACTTCTTaGTTGCAGCATCTAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TDHDPAHFSSQHHYGKISAFATS*LQHLEA Trigger: TGCTTCTAGATGCTGCAATCAAGAAGTAGCAAATGC...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAGTCGTTTCACTAGCATaGTGGCTAGGAGTCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKIVVSLA*WLGVFL Trigger: TAAGAAGACTCCTAGCCAGCATGCTAGTGAAACGAC...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCATTCCTGCAAACACTATaGCAACTTGGGCATTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: FSCKHYGNLGICYFLIAAFLQTL*QLGHLL Trigger: TAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAA...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCAATAGCCTCACTGGTTTaGAAGACTCTTCTATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FSCKHYGNLGICYFLIAAIASLV*KTLLFA Trigger: TGCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTAT...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGGTTTCACTAGCATGCTaGCTAGGAGTCTTCTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLVSLAC*LGVFLV Trigger: GACTAAGAAGACTCCTAGCCAGCATGCTAGTGAAAC...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCATTTAGCCCATTGCTGTaGCAAATATTTAGGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: FSCKHYGNLGICYFLIAAFSPLL*QIFRNL Trigger: AAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAA...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGCCTACGCCCATCTTTTaGTTTGCTGATATCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLPTPIF*FADIIC Trigger: GCAAATGATATCAGCAAATCAAAAGATGGGCGTAGG...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAGCATCTAGAAGCAGATaGCAAAATGAACGAGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: STDHDPAHFSSQHHYGKIASRSR*QNERVK Trigger: TTTCACTCGTTCATTTTGTCATCTGCTTCTAGATGC...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | CATTTCACTACAAACTCTCTCCTTTTATTAACGTTGAGTATGAACACGAAACGTAGTATCAGCGCCTTTTaGATAGCATCGCTGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: HFTTNSLLLLTLSMNTKRSISAF*IASLLV Trigger: GACTAGCAGCGATGCTATGCAAAAGGCGCTGATACT...ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGATCACCTGTTTAAAAGATCCTTCCTTGAGTCTTaGCAATCCGCAGTTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LLLLTLSMNTKRDHLFKRSFLES*QSAVSQ Trigger: TTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGA...TCTTTTAAACAGGTGATCACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCACTATACAATTCTCCTTaGATCTGTATTACCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSCKHYGNLGICYFLIAALYNSP*ICITSA Trigger: AGCTGAGGTAATACAGATCCAAGGAGAATTGTATAG...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CCA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCTCAATACATGTCTGCTaGGTAAGCAGTAAAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: TDHDPAHFSSQHHYGKISSIHVC*VSSKIL Trigger: CAGAATTTTACTGCTTACCCAGCAGACATGTATTGA...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR TCA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGATATCATTTGCCATGTaGTGGTCAATACATGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLISFAM*WSIHVC Trigger: GCAGACATGTATTGACCATCACATGGCAAATGATAT...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGATCACCTGTTTAAAAGAGCCAATGATGAACACTaGCATTTCACTACAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: LLLLTLSMNTKRDHLFKRANDEH*HFTTNS Trigger: AGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC...TCTTTTAAACAGGTGATCACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGATCACCTGTTTAAAAGATGGTCAATACATGTCTaGTGGGTAAGCAGTAAAATT | + |
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Preference number: 4 (lower is better) Translates to: LLLLTLSMNTKRDHLFKRWSIHV*WVSSKI Trigger: AATTTTACTGCTTACCCAGCAGACATGTATTGACCA...TCTTTTAAACAGGTGATCACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| 3UTR CAA 72 bp | TGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTaGAGTATGAACACGAAACGTGATCACCTGTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: CHFTTNSLLLLT*SMNTKRDHLFK Trigger: TTTAAACAGGTGATCACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS GCA 90 bp | CCCCGCGCTCGGCCATGGGTCTGCAGCCGGTGGAGGCGTGCGGGATaGAGCAGCGACCCCAGGAGCCGCAGGGCTGAGGAGCGGGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: PRARPWVCSRWRRAG*SSDPRSRRAEERAS Trigger: GGACGCCCGCTCCTCAGCCCTGCGGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CCA 90 bp | CGGTCAAGTCGAGTTCCCCGCGCTCGGCCATGGGTCTGCAGCCGGTaGAGGCGTGCGGGATGCAGCAGCGACCCCAGGAGCCGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSSRVPRARPWVCSR*RRAGCSSDPRSRRA Trigger: AGCCCTGCGGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS GCA 90 bp | GTTTGGCGCCGGTCAAGTCGAGTTCCCCGCGCTCGGCCATGGGTCTaGAGCCGGTGGAGGCGTGCGGGATGCAGCAGCGACCCCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VWRRSSRVPRARPWV*SRWRRAGCSSDPRS Trigger: GCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CCA 90 bp | TGTTCTGTTTGGCGCCGGTCAAGTCGAGTTCCCCGCGCTCGGCCATaGGTCTGCAGCCGGTGGAGGCGTGCGGGATGCAGCAGCGACCCC | + |
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Preference number: 5 (lower is better) Translates to: CSVWRRSSRVPRARP*VCSRWRRAGCSSDP Trigger: GGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS TCA 90 bp | CGCAGGGCTGAGGAGCGGGCGTCCGGAACAAAGGACAAGCCGCGCTaGGAGGCGAAGAGCCGGCGTTCCTTACCTGCCAGAACACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RRAEERASGTKDKPR*EAKSRRSLPARTLG Trigger: TCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | CAGTATCAGCGCCTTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATGCTGCACCTCAGTCCTTCCTaGAGTCTTGGCAATCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: QYQRLLHSIAASRFTSMLHLSPS*SLGNPQ Trigger: CTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTG...CAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCACTCCTGTGTTCTGTTaGGCGCCGGTCAAGTCGAGT | + |
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Preference number: 5 (lower is better) Translates to: TDHDPAHFSSQHHYGKISTPVFC*APVKSS Trigger: ACTCGACTTGACCGGCGCCAAACAGAACACAGGAGT...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS GCA 90 bp | TGGCTTAGTAACAAACTGGGCTCCTGTCAGATTTGTTTATTAGGCTaGTGTGGCCCTTTGCCAGGAACAGCTTTTATACACTCTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: WLSNKLGSCQICLLG*CGPLPGTAFIHSAP Trigger: AGGAGCAGAGTGTATAAAAGCTGTTCCTGGCAAAGGGCCACAGCAGCCTAATAAACAAATCTGACAGGAGCCCAGTTTGTTACTAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494087.5 |
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| CDS-3UTR CAA 90 bp | TTTTCCTGCAAACACTATGGCAACTTGGGCATTTGCTACTTCTTGATTGCAGCACAGTATCAGCGCCTTTaGCATAGCATCGCTGCTAGT | + |
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Preference number: 5 (lower is better) Translates to: FSCKHYGNLGICYFLIAAQYQRL*HSIAAS Trigger: ACTAGCAGCGATGCTATGCAAAAGGCGCTGATACTG...TGCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTTGCAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCTGGCAACTTGGGCATTaGCTACTTCTTGATTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TDHDPAHFSSQHHYGKISWQLGH*LLLDCS Trigger: GCTGCAATCAAGAAGTAGCAAATGCCCAAGTTGCCA...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | TCAACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAAACACTATGGCAACTaGGGCATTTGCTACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: STDHDPAHFSSQHHYGKIKHYGN*GICYFL Trigger: CAAGAAGTAGCAAATGCCCAAGTTGCCATAGTGTTT...TATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | ACTGACCATGATCCTGCACATTTCTCATCTCAGCATCACTACGGTAAAATAAGCCTCCTTTTATTAACGTaGAGTATGAACACGAAACGT | + |
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Preference number: 5 (lower is better) Translates to: TDHDPAHFSSQHHYGKISLLLLT*SMNTKR Trigger: ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAG...GCTTATTTTACCGTAGTGATGCTGAGATGAGAAATGTGCAGGATCATGGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | CATTTCACTACAAACTCTCTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGATAGCCTCACTGGTTaGGAAGACTCTTCTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: HFTTNSLLLLTLSMNTKRDSLTG*EDSSIC Trigger: GCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTATC...ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | GCCAATGATGAACACTGCCATTTCACTACAAACTCTCTCCTTTTATTAACGTTGTTAATGCCCCAGGAATaGAAACTAACGTTTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: ANDEHCHFTTNSLLLLTLLMPQE*KLTFSV Trigger: GACAGAAAACGTTAGTTTCAATTCCTGGGGCATTAA...CAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATGGCAGTGTTCATCATTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | CATTTCACTACAAACTCTCTCCTTTTATTAACGTTGAGTATGAACACGAAACGTAAATATTTAGGAACCTaGACTAGCCACACTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HFTTNSLLLLTLSMNTKRKYLGT*TSHTPV Trigger: CACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTT...ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | CATTTCACTACAAACTCTCTCCTTTTATTAACGTTGAGTATGAACACGAAACGTGCTATACAATTCTCCTaGGATCTGTATTACCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: HFTTNSLLLLTLSMNTKRAIQFS*DLYYLS Trigger: GCTGAGGTAATACAGATCCAAGGAGAATTGTATAGC...ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS-3UTR CAA 90 bp | CATTTCACTACAAACTCTCTCCTTTTATTAACGTTGAGTATGAACACGAAACGTCGCCCATCTTTTGATTaGCTGATATCATTTGCCATG | + |
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Preference number: 5 (lower is better) Translates to: HFTTNSLLLLTLSMNTKRRPSFD*LISFAM Trigger: CATGGCAAATGATATCAGCAAATCAAAAGATGGGCG...ACGTTTCGTGTTCATACTCAACGTTAATAAAAGGAGAGAGTTTGTAGTGAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CCA 72 bp | TGGCGCCGGTCAAGTCGAGTTCCCCGCGCTCGGCCATaGGTCTGCAGCCGGTGGAGGCGTGCGGGATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WRRSSRVPRARP*VCSRWRRAGCS Trigger: GCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS GCA 72 bp | CGGTCAAGTCGAGTTCCCCGCGCTCGGCCATGGGTCTaGAGCCGGTGGAGGCGTGCGGGATGCAGCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: RSSRVPRARPWV*SRWRRAGCSSD Trigger: GTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS TCA 72 bp | GAGGAGCGGGCGTCCGGAACAAAGGACAAGCCGCGCTaGGAGGCGAAGAGCCGGCGTTCCTTACCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EERASGTKDKPR*EAKSRRSLPAR Trigger: TCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CAA 72 bp | TTAGGAACCTTGACTAGCCACACTCCTGTGTTCTGTTaGGCGCCGGTCAAGTCGAGTTCCCCGCGCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGTLTSHTPVFC*APVKSSSPRSA Trigger: GGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CCA 72 bp | CCAGAAAATACTGTGACACTGGGCAGGTCTACTGTCTaGGTTATATTGTGTACCAGTTCAGCCTGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PENTVTLGRSTV*VILCTSSACQL Trigger: CAGCTGGCAGGCTGAACTGGTACACAATATAACCCAGACAGTAGACCTGCCCAGTGTCACAGTATTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494087.5 |
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| CDS GCA 72 bp | ATCAGAAAAAGGAAACAAAGGCTAGCATCTATTGTGTaGCTACTGGCCACCAAGCATTGTGGTGTGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: IRKRKQRLASIV*LLATKHCGVVT Trigger: AGTGACCACACCACAATGCTTGGTGGCCAGTAGGCACACAATAGATGCTAGCCTTTGTTTCCTTTTTCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494087.5 |
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| CDS GCA 72 bp | TTTTGCATAGCATCGCTGCTAGTCGTTTCACTAGCATaGTGGCTAGGAGTCTTCTTAGTCACTCTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FCIASLLVVSLA*WLGVFLVTLFF Trigger: GAAGAAAAGAGTGACTAAGAAGACTCCTAGCCAGCATGCTAGTGAAACGACTAGCAGCGATGCTATGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340473.8 |
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| CDS CAA 72 bp | GTGCCTACTGGCCACCAAGCATTGTGGTGTGGTCACTaGACAGACCTTACCTTATTGTATAATACACATATA | + |
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Preference number: 6 (lower is better) Translates to: VPTGHQALWCGH*TDLTLLYNTHI Trigger: TATATGTGTATTATACAATAAGGTAAGGTCTGTCAAGTGACCACACCACAATGCTTGGTGGCCAGTAGGCAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494087.5 |
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| CDS CAA 90 bp | ATCTATTGTGTGCCTACTGGCCACCAAGCATTGTGGTGTGGTCACTaGACAGACCTTACCTTATTGTATAATACACATATAAATGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: IYCVPTGHQALWCGH*TDLTLLYNTHINVS Trigger: TGAGACATTTATATGTGTATTATACAATAAGGTAAGGTCTGTCAAGTGACCACACCACAATGCTTGGTGGCCAGTAGGCACACAATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494087.5 |
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