RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF2F1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125651

Ensembl transcript IDs: ENST00000394456.10, ENST00000593678.5, ENST00000594213.5, ENST00000594965.1, ENST00000595047.5, ENST00000598607.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTaGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGG +
Preference number: 1 (lower is better)
Translates to: ERLREVEGRTVEVTQ*AAQALGQCEGGRAR
Trigger: CCTGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR CCA 90 bp GGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGCCCTaGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCC +
Preference number: 1 (lower is better)
Translates to: GGDGLTFPELLTTGP*ESGSKQDVEGSLRA
Trigger: GGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR TCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCGGCCCTTGGTCAGTGTaGGGGAGGCCGAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: SSESRASAYGTAGTTGSRGPWSV*GRPSQE
Trigger: CTCCTGGCTCGGCCTCCCTCACACTGACCAAGGGCC...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
3UTR-3UTR CCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGCCTCACTCTAGGATaGCGAAGGGGCAGTGAGAGC +
Preference number: 2 (lower is better)
Translates to: EVTQWAAQALGQCEGGRASLTLG*RRGSES
Trigger: GCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR CCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAAGCCTCACTCTAGGATaGCGAAGGGGCAGTGAGAGC +
Preference number: 2 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPSLTLG*RRGSES
Trigger: GCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCT...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR CCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGGCCAGAGGAGGAGATaGCTTAACTTTTCCAGAATT +
Preference number: 2 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPGQRRR*LNFSRI
Trigger: AATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGGCCTAACAGGCATCTaGAGATTCCAGAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCGLTGI*RFQKEG
Trigger: CCCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR CCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGCCAGAGGAGGAGATaGCTTAACTTTTCCAGAATT +
Preference number: 2 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEGQRRR*LNFSRI
Trigger: AATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCC...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR TCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGATGTCGAAGGGTCACTaGGAGCCTGAAGTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: AEERLREVEGRTVEVTQWMSKGH*EPEVLE
Trigger: CTCCAGAACTTCAGGCTCTCAGTGACCCTTCGACAT...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR-3UTR CAA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGGGGCAGCACAGGCCCTaGGTCAGTGTGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: TIIVHCSLELGLASQVAGGQHRP*VSVREA
Trigger: GGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCC...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000394456.10
3UTR CCA 72 bp AGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTaGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGC +
Preference number: 3 (lower is better)
Translates to: REVEGRTVEVTQ*AAQALGQCEGG
Trigger: GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
3UTR CCA 72 bp GGCTTAACTTTTCCAGAATTGCTAACTACGGGGCCCTaGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCA +
Preference number: 3 (lower is better)
Translates to: GLTFPELLTTGP*ESGSKQDVEGS
Trigger: TGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAATTCTGGAAAAGTTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGGGTGGAGGAGGTGCTaGCACCCTCTGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPGWRRC*HPLRWA
Trigger: CGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATGCCTGGGCGGCTGTTaGCCCTTGAGCTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPCLGGC*PLSSLP
Trigger: CGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTGCCACCCTCTGCGCTaGGCGTGCCTGGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKCHPLR*ACLGGC
Trigger: ACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCTTCCCAGACAGGCTCTaGGGTCCCGTGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAFPDRL*GPVSSR
Trigger: GCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAA...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATGGCCTTGGGGACTCTaGCCCCCTCCTCACCACTGG +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPWPWGL*PPPHHW
Trigger: CCAGTGGTGAGGAGGGGGGCAGAGTCCCCAAGGCCA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATCCCTTGCTCGAGTTTaGTGGCAGCCGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPSLARV*WQPPAG
Trigger: CCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGGAGCAGCCAGGGCTaGTCCTCGGGCCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGRSSQG*SSGRNS
Trigger: GGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCG...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGCGGCGCCTTCTTCTTaGCCTTGGGGACTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPAAPSS*PWGLCP
Trigger: GGGGCAGAGTCCCCAAGGCCAAGAAGAAGGCGCCGC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCTGCCACCCTCTGCGCTaGGCGTGCCTGGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGCHPLR*ACLGGC
Trigger: ACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCA...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCAGCCGCCCGCAGGGTaGAGGAGGTGCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGQPPAG*RRCCHP
Trigger: AGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTG...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCGGGTGTTGTCTTGCCTaGTGGTGGCTGGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAGCCLA*WWLGCR
Trigger: TCGACACCCCAGCCACCATCAGGCAAGACAACACCC...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCTCGTCTCCTCTGGCGTaGGCGTCCCTCGATCCCGGG +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGSSPLA*ASLDPG
Trigger: CCCGGGATCGAGGGACGCGCACGCCAGAGGAGACGA...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTGCCTGGGCGGCTGTTaGCCCTTGAGCTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVCLGGC*PLSSLP
Trigger: CGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCTCACCCGCTTCCCTTaGTCGAGTTTGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRALTRFP*SSLLAA
Trigger: GGCTGCCAGCAAACTCGAGCAAGGGAAGCGGGTGAG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGCGGAGCAGCCAGGGCTaGTCCTCGGGCCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWRSSQG*SSGRNS
Trigger: GGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCG...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAATGTCGCTCTCCTCTaGGCTGTCCGACTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRANVALL*AVRLLA
Trigger: AGCGAGGAGTCGGACAGCTCAGAGGAGAGCGACATT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCTCTTCTTCTTTTTCCTaGCGCCCTTGGCCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRASSSFS*RPWPAA
Trigger: CGCCGCTGGCCAAGGGCGGCAGGAAAAAGAAGAAGA...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGTTGGGCCCCTCCTCCTaGTGCGGCGCCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWLGPSS*CGALAL
Trigger: CAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAA...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCCAAGTAGCTGGGACTaGAGGCGCTCACCATCATGC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAPSSWD*RRSPSC
Trigger: GCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTGG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCGCGGCGCCTTCTTCTTaGCCTTGGGGACTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGAAPSS*PWGLCP
Trigger: GGGGCAGAGTCCCCAAGGCCAAGAAGAAGGCGCCGC...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGCCTGCTGCGGCGCCTTaGCCTTGCTCTCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKPAAAP*PCSQAL
Trigger: AAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGG...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTCAGCCGCCCGCAGGGTaGAGGAGGTGCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCQPPAG*RRCCHP
Trigger: AGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTG...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTCCCGAAGCTTGCGGTTaGACTCACTGCCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCPEACG*THCPRP
Trigger: CGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGG...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTGCCTGATTTGCCGTTaGCCCGGAGCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVCLICR*PGAARA
Trigger: AGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCTCTTCTTCTTCGCCATaGAGAGGGCTGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRASSSSP*RGLRRP
Trigger: AGGCCTCCTCAGCCCTCTTCATGGCGAAGAAGAAGA...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGCGGCTGTTGCCCCTTaGGCTCCCTCCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGAAVAP*APSRRL
Trigger: AAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGC...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGGCCCTTGGTCAGTGTaGGGGAGGCCGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCGPWSV*GRPSQE
Trigger: CTCCTGGCTCGGCCTCCCTCACACTGACCAAGGGCC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCGCAGTGAGCGTGCGATaGCGGGCCAGCGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRAVSVR*RASGVK
Trigger: TTTCACACCGCTGGCCCGGCATCGCACGCTCACTGC...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGGCTCGCTCGCCTTCCTaGGGCCACGTTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKARSPS*GHVSPS
Trigger: AGAAGGAGAAACGTGGCCGCAGGAAGGCGAGCGAGC...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTTGGGCCCCTCCTCCTaGTGCGGCGCCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCLGPSS*CGALAL
Trigger: CAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCTCACTACTGTCGCTCTaGTCATCGACACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRASLLSL*SSTPLG
Trigger: GCCCAAGGGTGTCGATGAGCAGAGCGACAGTAGTGA...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAAACCCTAGGCGCCTCTaGCGCTGGGAAAAGGTAACC +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPNPRRL*RWEKVT
Trigger: GGTTACCTTTTCCCAGCGCCAGAGGCGCCTAGGGTT...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTCCTTTCGTCTCCTCTaGCGTGCGCGTCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKSFRLL*RARPSI
Trigger: GATCGAGGGACGCGCACGCCAGAGGAGACGAAAGGA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCACCACTGGCATCACTaGCATCGGACGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAHHWHH*HRTTSP
Trigger: TGGAGATGTCGTCCGATGCCAGTGATGCCAGTGGTG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCCGCTCTCTCTTGGGTaGCGTCTTCTTCTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAPLSLG*RLLLRH
Trigger: ATGGCGAAGAAGAAGACGCCACCCAAGAGAGAGCGG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGCTTGCTCGAGTTTGCTaGCAGCCGCCCGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWLARVC*QPPAGW
Trigger: CCACCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAG...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCCCAGCCGCAACCGCTTaGCTGCAGGCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVPAATA*LQASRS
Trigger: TGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGG...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGTTCCCAGACAGGCTCTaGGGTCCCGTGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEFPDRL*GPVSSR
Trigger: GCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAA...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGGGCCGGAACTCCTTaGGGACGATGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGRAGTP*GRCRTS
Trigger: AGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCG...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCACTTGAACTTCCTGCCTaGTTTGCCGTTGACCCGGAG +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPLELPA*FAVDPE
Trigger: CTCCGGGTCAACGGCAAATCAGGCAGGAAGTTCAAG...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGCCATGAAGAGGGCTaGGGAGGCCTCGCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGRHEEG*GGLAVN
Trigger: ATTGACAGCGAGGCCTCCTCAGCCCTCTTCATGGCG...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGGCGGCTGTTGCCCCTTaGGCTCCCTCCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKAAVAP*APSRRL
Trigger: AAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGC...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATGTCGAAGGGTCACTaGGAGCCTGAAGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAMSKGH*EPEVLE
Trigger: CTCCAGAACTTCAGGCTCTCAGTGACCCTTCGACAT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCGCTCGCTCGCCTTCCTaGGGCCACGTTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVARSPS*GHVSPS
Trigger: AGAAGGAGAAACGTGGCCGCAGGAAGGCGAGCGAGC...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATCACTACTGTCGCTCTaGTCATCGACACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPSLLSL*SSTPLG
Trigger: GCCCAAGGGTGTCGATGAGCAGAGCGACAGTAGTGA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGGCGCTCACCATCATaGCCAGCCAAAACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRARRSPS*PAKTED
Trigger: GTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTCGTCCTCCAGGTCGTaGATGCGCAGCTCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCSSSRS*MRSSLA
Trigger: GGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCTTTTCCTGCCGCCCTTaGCCAGCGGCGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRFSCRP*PAAPSS
Trigger: AGAAGAAGGCGCCGCTGGCCAAGGGCGGCAGGAAAA...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACTTGCTCGAGTTTGCTaGCAGCCGCCCGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLARVC*QPPAGW
Trigger: CCACCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGTCGCTTGAGGATCTaGGCCAACACGTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: EVTQWAAQALGQCEGGRASRLRI*ANTFTV
Trigger: GACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGCGGCCTCCTCGGCAGTaGGCGTGCGATGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRRPPRQ*ACDAGP
Trigger: TGGCCCGGCATCGCACGCTCACTGCCGAGGAGGCCG...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGCGCCATGAAGAGGGCTaGGGAGGCCTCGCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCERHEEG*GGLAVN
Trigger: ATTGACAGCGAGGCCTCCTCAGCCCTCTTCATGGCG...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTTGAGCCGCCGCTGCTaGATGATGCTGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKLSRRC*MMLKWF
Trigger: GAACCACTTCAGCATCATGCAGCAGCGGCGGCTCAA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCTCCTTGAGCCGCCGCTaGTGCATGATGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRSLSRR*CMMLKW
Trigger: CCACTTCAGCATCATGCAGCAGCGGCGGCTCAAGGA...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCTCCTTGAGCCGCCGCTaGTGCATGATGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGSLSRR*CMMLKW
Trigger: CCACTTCAGCATCATGCAGCAGCGGCGGCTCAAGGA...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGCCTCCAGGTCGTGGATaGGCAGCTCGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKPPGRG*AARSPS
Trigger: GGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGG...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGTGGCCTTGGGGACTCTaGCCCCCTCCTCACCACTGG +
Preference number: 4 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKWPWGL*PPPHHW
Trigger: CCAGTGGTGAGGAGGGGGGCAGAGTCCCCAAGGCCA...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGGGCCCCTCCTCCTGCTaGGGCGCCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWGPSSC*GALALL
Trigger: GAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCC...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGTCCCTTGCTCGAGTTTaGTGGCAGCCGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGSLARV*WQPPAG
Trigger: CCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGA...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGCATCCTCAGTCACCTaGACGTCGCCGCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEASSVT*TSPLLG
Trigger: ACCCAACAGCGGCGACGTGCAGGTGACTGAGGATGC...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGGCCTAGGGCCGCCATaGGCAATGGTCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCGLGPP*AMVSGS
Trigger: GGAACCACTGACCATTGCCCATGGCGGCCCTAGGCC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTCCCCCTCCTCACCACTaGCATCACTGGCATCGGACG +
Preference number: 4 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTPPPHH*HHWHRT
Trigger: CGTCCGATGCCAGTGATGCCAGTGGTGAGGAGGGGG...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGCTCTCAGGCTCTTCTTaGGAGCTACTGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKLSGSS*ELLEPS
Trigger: AGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAG...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTCCTGCTGCGGCGCCTTaGCCTTGCTCTCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTPAAAP*PCSQAL
Trigger: AAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGG...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTTGCCTGATGGTGGCTaGGGTGTCGACTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVLPDGG*GVDFPD
Trigger: GTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCAGCCTCACTCTAGGATaGCGAAGGGGCAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGSLTLG*RRGSES
Trigger: GCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCT...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTGGAGTGCAGTGGCGTaGTGTCAGCTCACAGCAACC +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVWSAVA*CQLTAT
Trigger: GGTTGCTGTGAGCTGACACCACGCCACTGCACTCCA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGTCGGGTCTCTGTGCCTaGGCGAGGACCCCAACCCTA +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGSGLCA*ARTPTL
Trigger: TAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGA...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCCCGAAGCTTGCGGTTaGACTCACTGCCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGPEACG*THCPRP
Trigger: CGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACGGGCCGGAACTCCTTaGGGACGATGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGRAGTP*GRCRTS
Trigger: AGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGCCGGGCCAGCGGTGTaGAATTGTACCAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEAGPAV*NCTSCA
Trigger: TGCACAACTGGTACAATTTCACACCGCTGGCCCGGC...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCGCTACTGGAGCCGTCTaGCATGTAGTCCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRATGAV*HVVHLL
Trigger: CAAGAGGTGGACTACATGTCAGACGGCTCCAGTAGC...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGGGTGTTGTCTTGCCTaGTGGTGGCTGGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCGCCLA*WWLGCR
Trigger: TCGACACCCCAGCCACCATCAGGCAAGACAACACCC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCTTGAGCCGCCGCTGCTaGATGATGCTGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRLSRRC*MMLKWF
Trigger: GAACCACTTCAGCATCATGCAGCAGCGGCGGCTCAA...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGGGCCCCTCCTCCTGCTaGGGCGCCTTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRGPSSC*GALALL
Trigger: GAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCC...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGCTCCTGCGGGGTGGGTaGCTTCTTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKLLRGG*LLLLLL
Trigger: GAGGAGGAGGAGAAGAAGGCACCCACCCCGCAGGAG...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACTGCGCTTCTTCTCCTaGGGGGTGGGTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLRFFS*GVGAFF
Trigger: GAAGAAGGCACCCACCCCGCAGGAGAAGAAGCGCAG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTCGCTGCTGTCTTTCCTaGGCTTCTTCTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTRCCLS*ASSPAG
Trigger: CCCCGCAGGAGAAGAAGCGCAGGAAAGACAGCAGCG...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTCGCTGCTGTCTTTCCTaGGCTTCTTCTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCRCCLS*ASSPAG
Trigger: CCCCGCAGGAGAAGAAGCGCAGGAAAGACAGCAGCG...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTCTCACCCGCTTCCCTTaGTCGAGTTTGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCLTRFP*SSLLAA
Trigger: GGCTGCCAGCAAACTCGAGCAAGGGAAGCGGGTGAG...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCAACACGTTCACTGTCTaGTCGCTGCTCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGNTFTV*SLLSPV
Trigger: GACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTT...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTCAGTGGTTCCGATCTaGTCCGACCCGGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: IANYGALGVREQAGCRRVSVVPI*SDPGSF
Trigger: AAAGGAACCCGGGTCGGACCAGATCGGAACCACTGA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGCCATGGGCAATaGTCAGTGGTTCCGATCTGG +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGGRHGQ*SVVPIW
Trigger: CCAGATCGGAACCACTGACCATTGCCCATGGCGGCC...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTTTTCCTGCCGCCCTTaGCCAGCGGCGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCFSCRP*PAAPSS
Trigger: AGAAGAAGGCGCCGCTGGCCAAGGGCGGCAGGAAAA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCACTTCTTGGGAGCTACTaGAGCCGTCTGACATGTAGT +
Preference number: 4 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPLLGSY*SRLTCS
Trigger: ACTACATGTCAGACGGCTCCAGTAGCTCCCAAGAAG...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGCCAGCCGCAACCGCTTaGCTGCAGGCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGPAATA*LQASRS
Trigger: TGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGG...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGGCACGTCGCCGCTGTTaGGTGTTGTCTTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWARRRC*VLSCLM
Trigger: CATCAGGCAAGACAACACCCAACAGCGGCGACGTGC...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTAATGTCGCTCTCCTCTaGGCTGTCCGACTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCNVALL*AVRLLA
Trigger: AGCGAGGAGTCGGACAGCTCAGAGGAGAGCGACATT...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGAGTGCATTTTGTCGTTaGTCATCTTGCGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKSAFCR*SSCARG
Trigger: ACCCCGAGCGCAAGATGATCAACGACAAAATGCACT...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCGGCCTAACAGGCATCTaGAGATTCCAGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGGLTGI*RFQKEG
Trigger: CCCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCC...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGCCTCCAGGTCGTGGATaGGCAGCTCGCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWPPGRG*AARSPS
Trigger: GGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGG...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCTATTCAGTGACATTCTaGCTGCTAGGGCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRYSVTF*LLGPRA
Trigger: GGCCCTAGGCCCTAGCAGCCAGAATGTCACTGAATA...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGCACCACTGGCATCACTaGCATCGGACGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWHHWHH*HRTTSP
Trigger: TGGAGATGTCGTCCGATGCCAGTGATGCCAGTGGTG...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGCACGTCGCCGCTGTTaGGTGTTGTCTTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGARRRC*VLSCLM
Trigger: CATCAGGCAAGACAACACCCAACAGCGGCGACGTGC...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCAGTCGCTTGAGGATCTaGGCCAACACGTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRSRLRI*ANTFTV
Trigger: GACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACT...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGCAGGCTGGAGTGCAGTaGCGTGGTGTCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKQAGVQ*RGVSSQ
Trigger: CTGTGAGCTGACACCACGCCACTGCACTCCAGCCTG...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCGAAGGCCTCGTCGTCTaGACCCTTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGEGLVV*TLLLLL
Trigger: AAGAAGAAGAAGAAGGGTTCAGACGACGAGGCCTTC...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGATCTTCTTCTTCGCCATaGAGAGGGCTGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGSSSSP*RGLRRP
Trigger: AGGCCTCCTCAGCCCTCTTCATGGCGAAGAAGAAGA...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGGTGTCGGGTCTCTGTaGCTGAGCGAGGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGGVGSL*LSEDPN
Trigger: GTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACC...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCAAATTGTACCAGTTGTaGACGGGGAAGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRKLYQL*TGKASK
Trigger: CTTCGAGGCCTTCCCCGTGCACAACTGGTACAATTT...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCTCCTGCGGGGTGGGTaGCTTCTTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGLLRGG*LLLLLL
Trigger: GAGGAGGAGGAGAAGAAGGCACCCACCCCGCAGGAG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACGGGTGGAGGAGGTGCTaGCACCCTCTGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDGWRRC*HPLRWA
Trigger: CGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCC...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGCCGCAACCGCTTGGCTaGAGGCATCTCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRPQPLG*RHLAHP
Trigger: CGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGG...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTCACTGTCTGCTCGCTaGTCAGCCCTGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCSLSAR*SALSSW
Trigger: CCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTCGTCCTCCAGGTCGTaGATGCGCAGCTCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRSSSRS*MRSSLA
Trigger: GGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACTCTCAGGCTCTTCTTaGGAGCTACTGGAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLSGSS*ELLEPS
Trigger: AGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGCCAAGCCTCACTCCTTaGGGGAGAAGTGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEPSLTP*GRSAFC
Trigger: ACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGG...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACGGCCCTTGGTCAGTGTaGGGGAGGCCGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDGPWSV*GRPSQE
Trigger: CTCCTGGCTCGGCCTCCCTCACACTGACCAAGGGCC...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGCATCCTCAGTCACCTaGACGTCGCCGCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGASSVT*TSPLLG
Trigger: ACCCAACAGCGGCGACGTGCAGGTGACTGAGGATGC...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGTCACTGTCTGCTCGCTaGTCAGCCCTGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGSLSAR*SALSSW
Trigger: CCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGA...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGTCACCCAGGCTGGAGTaGAGTGGCGTGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWSPRLE*SGVVSA
Trigger: AGCTGACACCACGCCACTGCACTCCAGCCTGGGTGA...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCTGCATGATGCTGAAGTaGTTCAGCACCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGCMMLK*FSTLFL
Trigger: GAGGAACAAGGTGCTGAACCACTTCAGCATCATGCA...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGCCCCCTCCTCACCACTaGCATCACTGGCATCGGACG +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRPPPHH*HHWHRT
Trigger: CGTCCGATGCCAGTGATGCCAGTGGTGAGGAGGGGG...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGGCTTCCGCTCTCTCTTaGGTGGCGTCTTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGASALS*VASSSS
Trigger: CGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGC...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCCCTGTCTTCTTGGTCTaGAACTTTTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSESRASAYGTAGTTGSRPVFLV*NFFSRS
Trigger: GGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGG...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGGGCCAGAGGAGGAGATaGCTTAACTTTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: ALGVREQAGCRRVTESLKGQRRR*LNFSRI
Trigger: AATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCC...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCGTCGGGGCACTGGGTaGAGATGTAGTAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGRRGTG*RCSRTC
Trigger: ACACGTCCTACTACATCTTCACCCAGTGCCCCGACG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTAGTGCATTTTGTCGTTaGTCATCTTGCGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCSAFCR*SSCARG
Trigger: ACCCCGAGCGCAAGATGATCAACGACAAAATGCACT...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGTCTTCTTCTTTTTCCTaGCGCCCTTGGCCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWSSSFS*RPWPAA
Trigger: CGCCGCTGGCCAAGGGCGGCAGGAAAAAGAAGAAGA...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGCTGCGCTTCTTCTCCTaGGGGGTGGGTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRLRFFS*GVGAFF
Trigger: GAAGAAGGCACCCACCCCGCAGGAGAAGAAGCGCAG...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGTCTTCTCCTGCGGGGTaGGTGCCTTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGSSPAG*VPSSPP
Trigger: AGGAGGAGAAGAAGGCACCCACCCCGCAGGAGAAGA...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGCCTGTCTTCTTGGTCTaGAACTTTTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEPVFLV*NFFSRS
Trigger: GGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGG...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGAGCCTCACTCTAGGATaGCGAAGGGGCAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWSLTLG*RRGSES
Trigger: GCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCT...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCGGCCAGAGGAGGAGATaGCTTAACTTTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGGQRRR*LNFSRI
Trigger: AATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCC...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACTGCCTGATTTGCCGTTaGCCCGGAGCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDCLICR*PGAARA
Trigger: AGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCA...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGGAAGGCCTCGTCGTCTaGACCCTTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TIIVHCSLELGLASQVAGEGLVV*TLLLLL
Trigger: AAGAAGAAGAAGAAGGGTTCAGACGACGAGGCCTTC...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGCTACTGGAGCCGTCTaGCATGTAGTCCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGATGAV*HVVHLL
Trigger: CAAGAGGTGGACTACATGTCAGACGGCTCCAGTAGC...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCCTCCCAGGTTCAAGTaGATCTCGTGCCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGPPRFK*ISCLSL
Trigger: TAGGCTGAGGCACGAGATTCACTTGAACCTGGGAGG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR TCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGGTTCCTCTTCCTGCCTaGTTTGCCGTTGACCCGGAG +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRVPLPA*FAVDPE
Trigger: CTCCGGGTCAACGGCAAATCAGGCAGGAAGAGGAAC...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS-3UTR CCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGATGGGCAATGGTCAGTaGTTCCGATCTGGTCCGACC +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWMGNGQ*FRSGPT
Trigger: GGTCGGACCAGATCGGAACCACTGACCATTGCCCAT...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTCTTCTCCTGCGGGGTaGGTGCCTTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRSSPAG*VPSSPP
Trigger: AGGAGGAGAAGAAGGCACCCACCCCGCAGGAGAAGA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCCGCTCTCTCTTGGGTaGCGTCTTCTTCTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGPLSLG*RLLLRH
Trigger: ATGGCGAAGAAGAAGACGCCACCCAAGAGAGAGCGG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTTGCCTGATGGTGGCTaGGGTGTCGACTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRLPDGG*GVDFPD
Trigger: GTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGTCAGCCCTGTCTTCTTaGTCTGGAACTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRTVEVTQWAAQALGQCESALSS*SGTFSA
Trigger: TGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGA...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR TCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGGGCCTAACAGGCATCTaGAGATTCCAGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWGLTGI*RFQKEG
Trigger: CCCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCC...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGATCAGCCCTGTCTTCTTaGTCTGGAACTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGSALSS*SGTFSA
Trigger: TGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGA...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCTTCTTGGGAGCTACTaGAGCCGTCTGACATGTAGT +
Preference number: 4 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGLLGSY*SRLTCS
Trigger: ACTACATGTCAGACGGCTCCAGTAGCTCCCAAGAAG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGTTGACTTTGTCGGCTaGATTAAAAGCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCVDFVG*IKSHDV
Trigger: AACATCATGGCTTTTAATGCAGCCGACAAAGTCAAC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR GCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACAACACGTTCACTGTCTaGTCGCTGCTCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDNTFTV*SLLSPV
Trigger: GACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTT...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGTGCATGATGCTGAAGTaGTTCAGCACCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AEERLREVEGRTVEVTQWCMMLK*FSTLFL
Trigger: GAGGAACAAGGTGCTGAACCACTTCAGCATCATGCA...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACGCTTCCGCTCTCTCTTaGGTGGCGTCTTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDASALS*VASSSS
Trigger: CGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGC...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAAAACTGAAGACTTACTaGGCTATGTGGTGGATAAGT +
Preference number: 4 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGKLKTY*AMWWIS
Trigger: ACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTT...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTCCTTGAGGGAGAAGTaGATTTTGTCGTTGATCATC +
Preference number: 4 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRSLREK*ILSLII
Trigger: GATGATCAACGACAAAATGCACTTCTCCCTCAAGGA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR GCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACTCCTTGAGGGAGAAGTaGATTTTGTCGTTGATCATC +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDSLREK*ILSLII
Trigger: GATGATCAACGACAAAATGCACTTCTCCCTCAAGGA...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CCA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACAAACTGAAGACTTACTaGGCTATGTGGTGGATAAGT +
Preference number: 4 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDKLKTY*AMWWIS
Trigger: ACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTT...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS CCA 90 bp TGGCAGCCGCCCGCAGGGTGGAGGAGGTGCTGCCACCCTCTGCGCTaGGCGTGCCTGGGCGGCTGTTGCCCCTTGAGCTCCCTCCCGACG +
Preference number: 5 (lower is better)
Translates to: WQPPAGWRRCCHPLR*ACLGGCCPLSSLPT
Trigger: CGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS TCA 90 bp CCTCGATCCCGGGGAAGCCGCCGCTCGGTGTCGGGTCTCTGTGCCTaGGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCCCGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRSRGSRRSVSGLCA*ARTPTLGASGARSR
Trigger: CCTGGAACGGGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACCGAGCGGCGGCTTCCCCGGGATCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598607.1
CDS GCA 90 bp TCCCTTGCTCGAGTTTGCTGGCAGCCGCCCGCAGGGTGGAGGAGGTaGTGCCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCC +
Preference number: 5 (lower is better)
Translates to: SLARVCWQPPAGWRR*CHPLRWACLGGCCP
Trigger: GGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS GCA 90 bp CGTCCCTCGATCCCGGGGAAGCCGCCGCTCGGTGTCGGGTCTCTGTaGCTGAGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: RPSIPGKPPLGVGSL*LSEDPNPRRLWRPF
Trigger: GAACGGGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACCGAGCGGCGGCTTCCCCGGGATCGAGGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598607.1
CDS GCA 90 bp CGTCCCTCGATCCCGGGGAAGCCGCCGCTCGGTGTCGGGTCTCTGTaGCTGAGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: RPSIPGKPPLGVGSL*LSEDPNPRRLWRWE
Trigger: TTCCCAGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACCGAGCGGCGGCTTCCCCGGGATCGAGGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS GCA 90 bp CTTGCTCGAGTTTGCTGGCAGCCGCCCGCAGGGTGGAGGAGGTGCTaGCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LARVCWQPPAGWRRC*HPLRWACLGGCCPL
Trigger: CAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS TCA 90 bp GCTGCCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCCTTaGGCTCCCTCCCGACGGCTTCCGCTCTCTCTTGGGTGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: AATLCAGRAWAAVAP*APSRRLPLSLGWRL
Trigger: AAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS GCA 90 bp GGTTCCGATCTGGTCCGACCCGGGTTCCTTTCGTCTCCTCTGGCGTaGGCGTCCCTCGATCCCGGGGAAGCCGCCGCTCGGTGTCGGGTC +
Preference number: 5 (lower is better)
Translates to: GSDLVRPGFLSSPLA*ASLDPGEAAARCRV
Trigger: GACCCGACACCGAGCGGCGGCTTCCCCGGGATCGAGGGACGCGCACGCCAGAGGAGACGAAAGGAACCCGGGTCGGACCAGATCGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS TCA 90 bp CAGACGCCCAGGCCTCCCCCGCCACCGGGCTGGGCCTTACCGCCATaGAGAGGGCTGAGGAGGCCTCGCTGTCAATGTCGCTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: QTPRPPPPPGWALPP*RGLRRPRCQCRSPL
Trigger: CAGAGGAGAGCGACATTGACAGCGAGGCCTCCTCAGCCCTCTTCATGGCGGTAAGGCCCAGCCCGGTGGCGGGGGAGGCCTGGGCGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CCA 90 bp TCAGTGGTTCCGATCTGGTCCGACCCGGGTTCCTTTCGTCTCCTCTaGCGTGCGCGTCCCTCGATCCCGGGGAAGCCGCCGCTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: SVVPIWSDPGSFRLL*RARPSIPGKPPLGV
Trigger: GACACCGAGCGGCGGCTTCCCCGGGATCGAGGGACGCGCACGCCAGAGGAGACGAAAGGAACCCGGGTCGGACCAGATCGGAACCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS GCA 90 bp CCCAGACAGGCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTTGGCTaGAGGCATCTCGCTCACCCGCTTCCCTTGCTCGAGTTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: PRQALGSRVQPQPLG*RHLAHPLPLLEFAG
Trigger: GCCAGCAAACTCGAGCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGGCGGCTGTTGCCCCTaGAGCTCCCTCCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPGGCCP*SSLPTA
Trigger: AGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS CCA 90 bp GTCTTGCCTGATGGTGGCTGGGGTGTCGACTTCCCAGACAGGCTCTaGGGTCCCGTGTCCAGCCGCAACCGCTTGGCTGCAGGCATCTCG +
Preference number: 5 (lower is better)
Translates to: VLPDGGWGVDFPDRL*GPVSSRNRLAAGIS
Trigger: CGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS GCA 90 bp CTCCTCTCCCACTCCTCCTCGGCCTCCTCGGCAGTGAGCGTGCGATaGCGGGCCAGCGGTGTGAAATTGTACCAGTTGTGCACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LLSHSSSASSAVSVR*RASGVKLYQLCTGK
Trigger: CTTCCCCGTGCACAACTGGTACAATTTCACACCGCTGGCCCGGCATCGCACGCTCACTGCCGAGGAGGCCGAGGAGGAGTGGGAGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS CCA 90 bp ACTTCCCAGACAGGCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTTaGCTGCAGGCATCTCGCTCACCCGCTTCCCTTGCTCGAGTTTGC +
Preference number: 5 (lower is better)
Translates to: TSQTGSGVPCPAATA*LQASRSPASLARVC
Trigger: GCAAACTCGAGCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 90 bp ACCTGCACGTCGCCGCTGTTGGGTGTTGTCTTGCCTGATGGTGGCTaGGGTGTCGACTTCCCAGACAGGCTCTGGGGTCCCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TCTSPLLGVVLPDGG*GVDFPDRLWGPVSS
Trigger: GCTGGACACGGGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGACAACACCCAACAGCGGCGACGTGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594965.1
CDS CCA 90 bp GTCGGGTCTCTGTGCCTGAGCGAGGACCCCAACCCTAGGCGCCTCTaGCGCTGGGAAAAGGTAACCGGAAGAGGCGCTCAAGCTACTCGG +
Preference number: 5 (lower is better)
Translates to: VGSLCLSEDPNPRRL*RWEKVTGRGAQATR
Trigger: CCGAGTAGCTTGAGCGCCTCTTCCGGTTACCTTTTCCCAGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATCCCGAAGCTTGCGGTaGAACTCACTGCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPSRSLR*NSLPAP
Trigger: GGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCGTGCCTGGGCGGCTGTaGCCCCTTGAGCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVVPGRL*PLELPP
Trigger: GGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCAC...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS GCA 90 bp CACTGGCATCGGACGACATCTCCAGGTCGTCCTCCAGGTCGTGGATaGGCAGCTCGCTCGCCTTCCTGCGGCCACGTTTCTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HWHRTTSPGRPPGRG*AARSPSCGHVSPSP
Trigger: AGGAGAAGGAGAAACGTGGCCGCAGGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGACCTGGAGATGTCGTCCGATGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
CDS GCA 90 bp CATCGACACCCTTGGGCCCCTCCTCCTGCTGCGGCGCCTTGGCCTTaGTCTCAGGCTCTTCTTGGGAGCTACTGGAGCCGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: HRHPWAPPPAAAPWP*SQALLGSYWSRLTC
Trigger: ACATGTCAGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAAGGGTGTCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000595047.5
CDS GCA 90 bp ATCGCCTACCCTTGGGCCCCTCCTCCTGCTGCGGCGCCTTGGCCTTaGTCTCAGGCTCTTCTTGGGAGCTACTGGAGCCGTCTGACATGT +
Preference number: 5 (lower is better)
Translates to: IAYPWAPPPAAAPWP*SQALLGSYWSRLTC
Trigger: ACATGTCAGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAAGGGTAGGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594965.1
CDS CCA 90 bp GCATCACTGGCATCGGACGACATCTCCAGGTCGTCCTCCAGGTCGTaGATGCGCAGCTCGCTCGCCTTCCTGCGGCCACGTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ASLASDDISRSSSRS*MRSSLAFLRPRFSF
Trigger: GAAGGAGAAACGTGGCCGCAGGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGACCTGGAGATGTCGTCCGATGCCAGTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
CDS CCA 90 bp CCGACTCCTCGCTGCTGTCTTTCCTGCGCTTCTTCTCCTGCGGGGTaGGTGCCTTCTTCTCCTCCTCCTCCTCCTTGTCCTCCTCAGGCG +
Preference number: 5 (lower is better)
Translates to: PTPRCCLSCASSPAG*VPSSPPPPPCPPQA
Trigger: CGCCTGAGGAGGACAAGGAGGAGGAGGAGGAGAAGAAGGCACCCACCCCGCAGGAGAAGAAGCGCAGGAAAGACAGCAGCGAGGAGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 90 bp CGCTCTCTCTTGGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGTTaGGAGGTGGGTGAGTCTGCAAACAGACGCCCAGGCCTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RSLLGGVFFFCRGQG*EVGESANRRPGLPR
Trigger: GCGGGGGAGGCCTGGGCGTCTGTTTGCAGACTCACCCACCTCCCAACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CCA 90 bp GGCTGTTGCCCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTTaGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGTTGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GCCPLSSLPTASALS*VASSSSAEVRVGRW
Trigger: CCACCTCCCAACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGCCTCCTCCCGAAGCTaGCGGTTGAACTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPASSRS*RLNSLP
Trigger: GGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGAGCGGCGCCTTCTTCTaGGCCTTGGGGACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKSGAFF*ALGTLP
Trigger: GGGCAGAGTCCCCAAGGCCAAGAAGAAGGCGCCGCT...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTGCTCATCGACACCCTaGGGCCCCTCCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKCSSTP*GPSSCC
Trigger: GCAGCAGGAGGAGGGGCCCAAGGGTGTCGATGAGCA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTTCCCTTGCTCGAGTTaGCTGGCAGCCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKFPCSS*LAAARR
Trigger: CCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGAA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAGCTCACCCGCTTCCCTaGCTCGAGTTTGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPAHPLP*LEFAGS
Trigger: GCTGCCAGCAAACTCGAGCAAGGGAAGCGGGTGAGC...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCGCCGCTGTTGGGTGTaGTCTTGCCTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EVTQWAAQALGQCEGGRARRCWV*SCLMVA
Trigger: AGCCACCATCAGGCAAGACAACACCCAACAGCGGCG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCGGGCAGCACAGGCCCTaGGTCAGTGTGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVGQHRP*VSVREA
Trigger: GGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCC...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS TCA 90 bp CGATGCCGTACTTCTTCCTCCGAGCCTCCTCCCGAAGCTTGCGGTTaGACTCACTGCCCGCGCCCGATTCGGGCATCTCCTCCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: RCRTSSSEPPPEACG*THCPRPIRASPPLG
Trigger: ACCAAGAGGAGGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGTACGGCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS TCA 90 bp ATCCTCAGTCACCTGCACGTCGCCGCTGTTGGGTGTTGTCTTGCCTaGTGGTGGCTGGGGTGTCGACTTCCCAGACAGGCTCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ILSHLHVAAVGCCLA*WWLGCRLPRQALGS
Trigger: GGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGACAACACCCAACAGCGGCGACGTGCAGGTGACTGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594965.1
CDS CCA 90 bp ACATTCTGGCTGCTAGGGCCTAGGGCCGCCATGGGCAATGGTCAGTaGTTCCGATCTGGTCCGACCCGGGTTCCTTTCGTCTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TFWLLGPRAAMGNGQ*FRSGPTRVPFVSSG
Trigger: GCCAGAGGAGACGAAAGGAACCCGGGTCGGACCAGATCGGAACCACTGACCATTGCCCATGGCGGCCCTAGGCCCTAGCAGCCAGAATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CCA 90 bp TCTCTGTGCCTGAGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCTaGGAAAAGGTAACCGGAAGAGGCGCTCAAGCTACTCGGTCTACG +
Preference number: 5 (lower is better)
Translates to: SLCLSEDPNPRRLWR*EKVTGRGAQATRST
Trigger: CGTAGACCGAGTAGCTTGAGCGCCTCTTCCGGTTACCTTTTCCCAGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS CCA 90 bp CTCCTCCTCACTCTCCTCACTACTGTCGCTCTGCTCATCGACACCTaGGAGGGGCAGGGTATGAGCAAGAGCAGGGAAGCACCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LLLTLLTTVALLIDT*EGQGMSKSREAPPP
Trigger: TGGGGGCGGTGCTTCCCTGCTCTTGCTCATACCCTGCCCCTCCCAGGTGTCGATGAGCAGAGCGACAGTAGTGAGGAGAGTGAGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594965.1
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGTTTTTCCTGCCGCCCTaGGCCAGCGGCGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKFFLPP*ASGAFF
Trigger: GAAGAAGGCGCCGCTGGCCAAGGGCGGCAGGAAAAA...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCATGTAGTCCACCTCTaGGCCCTCGAAGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAHVVHL*ALEVPI
Trigger: GATGGGGACTTCGAGGGCCAAGAGGTGGACTACATG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCGGCTTCCGCTCTCTCTaGGGTGGCGTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EVTQWAAQALGQCEGGRAGFRSL*GGVFFF
Trigger: GAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCC...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTGGCGGCTGTTGCCCCTaGAGCTCCCTCCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTGGCCP*SSLPTA
Trigger: AGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCC...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGTGCCTGGGCGGCTGTaGCCCCTTGAGCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCVPGRL*PLELPP
Trigger: GGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCAC...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTTCCCTTGCTCGAGTTaGCTGGCAGCCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVFPCSS*LAAARR
Trigger: CCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGAA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCCTGTTGGGTGTTGTCTaGCCTGATGGTGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: EVTQWAAQALGQCEGGRALLGVV*PDGGWG
Trigger: ACCCCAGCCACCATCAGGCAAGACAACACCCAACAG...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATCGGGGTTGAGTCGCTaGAGGATCTGGGCCAACACG +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPSGLSR*RIWANT
Trigger: CGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS GCA 90 bp CCTCCCGACGGCTTCCGCTCTCTCTTGGGTGGCGTCTTCTTCTTCTaGAGAGGTCAGGGTTGGGAGGTGGGTGAGTCTGCAAACAGACGC +
Preference number: 5 (lower is better)
Translates to: PPDGFRSLLGGVFFF*RGQGWEVGESANRR
Trigger: GCGTCTGTTTGCAGACTCACCCACCTCCCAACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CCA 90 bp TTCCTCTTCCTGCCTGATTTGCCGTTGACCCGGAGCAGCCAGGGCTaGTCCTCGGGCCGGAACTCCTTGAGGACGATGCCGTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: FLFLPDLPLTRSSQG*SSGRNSLRTMPYFF
Trigger: GAAGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCACATGTAGTCCACCTCTaGGCCCTCGAAGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPHVVHL*ALEVPI
Trigger: GATGGGGACTTCGAGGGCCAAGAGGTGGACTACATG...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCATGCACGTCGCCGCTGTaGGGTGTTGTCTTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPCTSPL*GVVLPD
Trigger: ATCAGGCAAGACAACACCCAACAGCGGCGACGTGCA...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS TCA 90 bp GCCCTCGAAGTCCCCATCATCGCTGTCCTCGAAGGCCTCGTCGTCTaGACCCTTCTTCTTCTTCTTTTTCCTGCCGCCCTTGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: ALEVPIIAVLEGLVV*TLLLLLFPAALGQR
Trigger: CCGCTGGCCAAGGGCGGCAGGAAAAAGAAGAAGAAGAAGGGTTCAGACGACGAGGCCTTCGAGGACAGCGATGATGGGGACTTCGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000595047.5
CDS CCA 90 bp TTGAACTTCCTGCCTGATTTGCCGTTGACCCGGAGCAGCCAGGGCTaGTCCTCGGGCCGGAACTCCTTGAGGACGATGCCGTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: LNFLPDLPLTRSSQG*SSGRNSLRTMPYFF
Trigger: GAAGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS-3UTR CAA 90 bp TCAAGTGAATCTCGTGCCTCAGCCTACGGAACAGCTGGGACAACAGGCTCCCGCTCGGGCCGGAACTCCTaGAGGACGATGCCGTACTTC +
Preference number: 5 (lower is better)
Translates to: SSESRASAYGTAGTTGSRSGRNS*RTMPYF
Trigger: GAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGA...GCGGGAGCCTGTTGTCCCAGCTGTTCCGTAGGCTGAGGCACGAGATTCACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACTGCCTGATTTGCCGTaGACCCGGAGCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLPDLP*TRSSQG
Trigger: GCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTCCAGCCGCAACCGCTaGGCTGCAGGCATCTCGCTC +
Preference number: 5 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCSSRNR*AAGISL
Trigger: GAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCTCTTCCTGCCTGATTaGCCGTTGACCCGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGLFLPD*PLTRSS
Trigger: GCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGAG...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS-3UTR CAA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTGCCTCCTCCCGAAGCTaGCGGTTGAACTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTASSRS*RLNSLP
Trigger: GGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGC...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGCTGCCTGATTTGCCGTaGACCCGGAGCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKLPDLP*TRSSQG
Trigger: GCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAG...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGAAGTGGTTCAGCACCTaGTTCCTCCTCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKKWFST*FLLSHS
Trigger: GGAGTGGGAGAGGAGGAACAAGGTGCTGAACCACTT...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp CAAGTAGCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTGCGGCGCCTTGGCCTaGCTCTCAGGCTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QVAGTAGAHHHAQPKLKTCGALA*LSGSSW
Trigger: CCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCA...AGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGTCCAGCCGCAACCGCTaGGCTGCAGGCATCTCGCTC +
Preference number: 5 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKSSRNR*AAGISL
Trigger: GAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGA...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCTGGGACTGCAGGCGCTCACCATCATGCCCAGCCAAAACTGAAGACTTACTGGTCGGGGTTGAGTCGCTaGAGGATCTGGGCCAACACG +
Preference number: 5 (lower is better)
Translates to: AGTAGAHHHAQPKLKTYWSGLSR*RIWANT
Trigger: CGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGA...CCAGTAAGTCTTCAGTTTTGGCTGGGCATGATGGTGAGCGCCTGCAGTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp GAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCACCAAGCCTCACTCCTaGAGGGAGAAGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: EVTQWAAQALGQCEGGRATKPHS*REKCIL
Trigger: CAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGGT...GGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTTCGGGCCGGAACTCCTaGAGGACGATGCCGTACTTC +
Preference number: 5 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCSGRNS*RTMPYF
Trigger: GAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGA...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCCGAGCCAACCAAGCCTCACTCCTaGAGGGAGAAGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: KLPSGQHRPLVSVREAEPTKPHS*REKCIL
Trigger: CAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGGT...TGGCTCGGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGGGCAGCACAGGCCCTaGGTCAGTGTGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGGQHRP*VSVREA
Trigger: GGCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCC...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS CCA 90 bp TTGTCGTTGATCATCTTGCGCTCGGGGTTGAGTCGCTTGAGGATCTaGGCCAACACGTTCACTGTCTGCTCGCTGCTCAGCCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSLIILRSGLSRLRI*ANTFTVCSLLSPVF
Trigger: GAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS-3UTR CAA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAAACTTCCTGCCTGATTaGCCGTTGACCCGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGNFLPD*PLTRSS
Trigger: GCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGTT...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGTGAAATTGTACCAGTaGTGCACGGGGAAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEVKLYQ*CTGKAS
Trigger: CGAGGCCTTCCCCGTGCACAACTGGTACAATTTCAC...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGACTGTTGGGTGTTGTCTaGCCTGATGGTGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLLGVV*PDGGWG
Trigger: ACCCCAGCCACCATCAGGCAAGACAACACCCAACAG...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCACTGAGAGCCTGAAGCTCAGCCCTGTCTTCTaGGTCTGGAACTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: ALGVREQAGCRRVTESLKLSPVF*VWNFFS
Trigger: GCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAG...CTTCAGGCTCTCAGTGACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS GCA 90 bp TCGGGGTTGAGTCGCTTGAGGATCTGGGCCAACACGTTCACTGTCTaGTCGCTGCTCAGCCCTGTCTTCTTGGTCTGGAACTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SGLSRLRIWANTFTV*SLLSPVFLVWNFFS
Trigger: GCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS-3UTR CAA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTCCCGAAGCTTGCGGTaGAACTCACTGCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRSRSLR*NSLPAP
Trigger: GGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGGCCAGCGGTGTGAAATaGTACCAGTTGTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKASGVK*YQLCTG
Trigger: CCCCGTGCACAACTGGTACAATTTCACACCGCTGGC...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGTTTTTCCTGCCGCCCTaGGCCAGCGGCGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AEERLREVEGRTVEVTQWFFLPP*ASGAFF
Trigger: GAAGAAGGCGCCGCTGGCCAAGGGCGGCAGGAAAAA...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGTGCGGCGCCTTGGCCTaGCTCTCAGGCTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGCGALA*LSGSSW
Trigger: CCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCA...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAGGAGGACAATAAGAAGGCCTAACAGGCATCTGAAGATTCCAGAAGGAAGGTGCTCATCGACACCCTaGGGCCCCTCCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RRRTIRRPNRHLKIPEGRCSSTP*GPSSCC
Trigger: GCAGCAGGAGGAGGGGCCCAAGGGTGTCGATGAGCA...CCTTCCTTCTGGAATCTTCAGATGCCTGTTAGGCCTTCTTATTGTCCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCCTCAGCCCTGTCTTCTaGGTCTGGAACTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVLSPVF*VWNFFS
Trigger: GCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAG...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGATTGTCGTTGATCATCTaGCGCTCGGGGTTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGLSLII*RSGLSR
Trigger: GCGACTCAACCCCGAGCGCAAGATGATCAACGACAA...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCAAGTGGTTCAGCACCTaGTTCCTCTTCCTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVKWFST*FLFLPD
Trigger: ATCAGGCAGGAAGAGGAACAAGGTGCTGAACCACTT...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGCGCCGCTGTTGGGTGTaGTCTTGCCTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGRRCWV*SCLMVA
Trigger: AGCCACCATCAGGCAAGACAACACCCAACAGCGGCG...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp TGTATTGGACAGAGCCTCACTCTAGGATGGCGAAGGGGCAGTGAGAGCCTTAAGTTGTCGTTGATCATCTaGCGCTCGGGGTTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: CIGQSLTLGWRRGSESLKLSLII*RSGLSR
Trigger: GCGACTCAACCCCGAGCGCAAGATGATCAACGACAA...CTTAAGGCTCTCACTGCCCCTTCGCCATCCTAGAGTGAGGCTCTGTCCAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS TCA 90 bp TGGAGGGACGAAGATTTGGGGGAACCCAAGATGTGGAGATTATTGTaGACTCAGCCTTGGGGAGGAGGGAGGACAGGCAGGGAGTATTTC +
Preference number: 5 (lower is better)
Translates to: WRDEDLGEPKMWRLL*TQPWGGGRTGREYF
Trigger: GAAATACTCCCTGCCTGTCCTCCCTCCTCCCCAAGGCTGAGTTCACAATAATCTCCACATCTTGGGTTCCCCCAAATCTTCGTCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS CCA 90 bp AACACGTTCACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTGGTCTaGAACTTTTTCAGCAGGTCCTTAGTGGTCATGGGCTTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: NTFTVCSLLSPVFLV*NFFSRSLVVMGFRV
Trigger: GACACGGAAGCCCATGACCACTAAGGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CCA 90 bp CTCCTGACCCCAGGCAGAAGAAGAGCAGATGGAGGGACGAAGATTTaGGGGAACCCAAGATGTGGAGATTATTGTGAACTCAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLTPGRRRADGGTKI*GNPRCGDYCELSLG
Trigger: CCCAAGGCTGAGTTCACAATAATCTCCACATCTTGGGTTCCCCCAAATCTTCGTCCCTCCATCTGCTCTTCTTCTGCCTGGGGTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS-3UTR CAA 90 bp ACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAGGCGTAGCAAAGTTGACTTaGTCGGCTGCATTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: TVEVTQWAAQALGQCEGGVAKLT*SAALKA
Trigger: GGCTTTTAATGCAGCCGACAAAGTCAACTTTGCTAC...GCCTCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp ATTGCTAACTACGGGGCCCTGGGAGTCAGGGAGCAAGCAGGATGTCGAAGGGTCTTCCACGTAGCAAAGTaGACTTTGTCGGCTGCATTA +
Preference number: 5 (lower is better)
Translates to: IANYGALGVREQAGCRRVFHVAK*TLSAAL
Trigger: TAATGCAGCCGACAAAGTCAACTTTGCTACGTGGAA...GACCCTTCGACATCCTGCTTGCTCCCTGACTCCCAGGGCCCCGTAGTTAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGGCATCTCCTCCTCTaGGTAGATTTTCTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEGHLLL*VDFLVA
Trigger: AGCAACAAGAAAATCTACCAAGAGGAGGAGATGCCC...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACAGCGGCGCCTTCTTCTaGGCCTTGGGGACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDSGAFF*ALGTLP
Trigger: GGGCAGAGTCCCCAAGGCCAAGAAGAAGGCGCCGCT...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGGGCTTCCGCTCTCTCTaGGGTGGCGTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AEERLREVEGRTVEVTQWGFRSL*GGVFFF
Trigger: GAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCC...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GAAGGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTAAGTGCATTTTGTCGTaGATCATCTTGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: EGRTVEVTQWAAQALGQCKCILS*IILRSG
Trigger: CCCCGAGCGCAAGATGATCAACGACAAAATGCACTT...ACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGGGAAAGTGCATTTTGTCGTaGATCATCTTGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RTVEVTQWAAQALGQCEGKCILS*IILRSG
Trigger: CCCCGAGCGCAAGATGATCAACGACAAAATGCACTT...TCCCTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GGGAGAACTGTAGAAGTTACCCAGTGGGCAGCACAGGCCCTTGGTCAGTGTGAGAGGGAGAAGTGCATTTaGTCGTTGATCATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GRTVEVTQWAAQALGQCEREKCI*SLIILR
Trigger: GCGCAAGATGATCAACGACAAAATGCACTTCTCCCT...CTCACACTGACCAAGGGCCTGTGCTGCCCACTGGGTAACTTCTACAGTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACGCTCACCCGCTTCCCTaGCTCGAGTTTGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDAHPLP*LEFAGS
Trigger: GCTGCCAGCAAACTCGAGCAAGGGAAGCGGGTGAGC...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp GCTGAAGAGAGACTTAGGGAAGTGGAAGGGAGAACTGTAGAAGTTACCCAGTGGGTTACGCCTCCCTTCTaGATGCCCTTGAACTTCCTG +
Preference number: 5 (lower is better)
Translates to: AEERLREVEGRTVEVTQWVTPPF*MPLNFL
Trigger: CAGGAAGTTCAAGGGCATCAAGAAGGGAGGCGTAAC...CCACTGGGTAACTTCTACAGTTCTCCCTTCCACTTCCCTAAGTCTCTCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS-3UTR CAA 90 bp ACCATCATAGTTCACTGCAGCCTTGAACTGGGCTTAGCCTCCCAAGTAGCTGGGAGGGAGAAGTGCATTTaGTCGTTGATCATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: TIIVHCSLELGLASQVAGREKCI*SLIILR
Trigger: GCGCAAGATGATCAACGACAAAATGCACTTCTCCCT...CCCAGCTACTTGGGAGGCTAAGCCCAGTTCAAGGCTGCAGTGAACTATGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394456.10
CDS CCA 90 bp TGGTTGTATTCCCAGCTTCATTCAGCCTGTTTTGCCTGGCAACACTaGATACGGAAGACTCCAAGGATTCCCAGTCTGCCAGAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: WLYSQLHSACFAWQH*IRKTPRIPSLPEKL
Trigger: TAGCTTCTCTGGCAGACTGGGAATCCTTGGAGTCTTCCGTATCCAGTGTTGCCAGGCAAAACAGGCTGAATGAAGCTGGGAATACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS-3UTR CAA 90 bp AAAACTGAAGACTTACTGGGCTATGTGGTGGATAAGTCACAGCTGAAGAGAGACTGCACGTCGCCGCTGTaGGGTGTTGTCTTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: KTEDLLGYVVDKSQLKRDCTSPL*GVVLPD
Trigger: ATCAGGCAAGACAACACCCAACAGCGGCGACGTGCA...GTCTCTCTTCAGCTGTGACTTATCCACCACATAGCCCAGTAAGTCTTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGGTAGCAAAGTTGACTTaGTCGGCTGCATTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGVAKLT*SAALKA
Trigger: GGCTTTTAATGCAGCCGACAAAGTCAACTTTGCTAC...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS-3UTR CAA 90 bp AGGAAGGGCCAGAGGAGGAGATGGCTTAACTTTTCCAGAATTGCTAACTACGGGTTCCACGTAGCAAAGTaGACTTTGTCGGCTGCATTA +
Preference number: 5 (lower is better)
Translates to: RKGQRRRWLNFSRIANYGFHVAK*TLSAAL
Trigger: TAATGCAGCCGACAAAGTCAACTTTGCTACGTGGAA...CCCGTAGTTAGCAATTCTGGAAAAGTTAAGCCATCTCCTCCTCTGGCCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000593678.5
CDS TCA 72 bp CGGGGAAGCCGCCGCTCGGTGTCGGGTCTCTGTGCCTaGGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: RGSRRSVSGLCA*ARTPTLGASGA
Trigger: GGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACCGAGCGGCGGCTTCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598607.1
CDS GCA 72 bp GTTTGCTGGCAGCCGCCCGCAGGGTGGAGGAGGTGCTaGCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGT +
Preference number: 6 (lower is better)
Translates to: VCWQPPAGWRRC*HPLRWACLGGC
Trigger: ACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGCACCTCCTCCACCCTGCGGGCGGCTGCCAGCAAAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS TCA 72 bp CGGGGAAGCCGCCGCTCGGTGTCGGGTCTCTGTGCCTaGGCGAGGACCCCAACCCTAGGCGCCTCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: RGSRRSVSGLCA*ARTPTLGASGA
Trigger: AGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAGAGACCCGACACCGAGCGGCGGCTTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS GCA 72 bp CTGGTCCGACCCGGGTTCCTTTCGTCTCCTCTGGCGTaGGCGTCCCTCGATCCCGGGGAAGCCGCCGCTCGG +
Preference number: 6 (lower is better)
Translates to: LVRPGFLSSPLA*ASLDPGEAAAR
Trigger: CCGAGCGGCGGCTTCCCCGGGATCGAGGGACGCGCACGCCAGAGGAGACGAAAGGAACCCGGGTCGGACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS GCA 72 bp TGCCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTaGCCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: CHPLRWACLGGC*PLSSLPTASAL
Trigger: GAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS TCA 72 bp CTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCCTTaGGCTCCCTCCCGACGGCTTCCGCTCTCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: LCAGRAWAAVAP*APSRRLPLSLG
Trigger: CCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 72 bp CCGATCTGGTCCGACCCGGGTTCCTTTCGTCTCCTCTaGCGTGCGCGTCCCTCGATCCCGGGGAAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PIWSDPGSFRLL*RARPSIPGKPP
Trigger: CGGCGGCTTCCCCGGGATCGAGGGACGCGCACGCCAGAGGAGACGAAAGGAACCCGGGTCGGACCAGATCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp CCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCCTaGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: PLRWACLGGCCP*SSLPTASALSW
Trigger: CCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 90 bp TGCTGCCACCCTCTGCGCTGGGCGTGCCTGGGCGGCTGTTGCCCCTaGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTTGGGTGGCGTCT +
Preference number: 6 (lower is better)
Translates to: CCHPLRWACLGGCCP*SSLPTASALSWVAS
Trigger: AGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCGCCCAGGCACGCCCAGCGCAGAGGGTGGCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS TCA 72 bp AGGCCTCCCCCGCCACCGGGCTGGGCCTTACCGCCATaGAGAGGGCTGAGGAGGCCTCGCTGTCAATGTCGC +
Preference number: 6 (lower is better)
Translates to: RPPPPPGWALPP*RGLRRPRCQCR
Trigger: GCGACATTGACAGCGAGGCCTCCTCAGCCCTCTTCATGGCGGTAAGGCCCAGCCCGGTGGCGGGGGAGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CAA 90 bp GCCTCCTCGGCAGTGAGCGTGCGATGCCGGGCCAGCGGTGTGAAATaGTACCAGTTGTGCACGGGGAAGGCCTCGAAGGCCCCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: ASSAVSVRCRASGVK*YQLCTGKASKAPSG
Trigger: CCCCGACGGGGCCTTCGAGGCCTTCCCCGTGCACAACTGGTACAATTTCACACCGCTGGCCCGGCATCGCACGCTCACTGCCGAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS GCA 72 bp GCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTTGGCTaGAGGCATCTCGCTCACCCGCTTCCCTTGCTCGAG +
Preference number: 6 (lower is better)
Translates to: ALGSRVQPQPLG*RHLAHPLPLLE
Trigger: CTCGAGCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 72 bp GCATCTCGCTCACCCGCTTCCCTTGCTCGAGTTTGCTaGCAGCCGCCCGCAGGGTGGAGGAGGTGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: ASRSPASLARVC*QPPAGWRRCCH
Trigger: GTGGCAGCACCTCCTCCACCCTGCGGGCGGCTGCCAGCAAACTCGAGCAAGGGAAGCGGGTGAGCGAGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 72 bp GACAGGCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTaGGCTGCAGGCATCTCGCTCACCCGCTTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: DRLWGPVSSRNR*AAGISLTRFPC
Trigger: GCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 90 bp CCGTTGACCCGGAGCAGCCAGGGCTGGTCCTCGGGCCGGAACTCCTaGAGGACGATGCCGTACTTCTTCCTCCGAGCCTCCTCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: PLTRSSQGWSSGRNS*RTMPYFFLRASSRS
Trigger: GCTTCGGGAGGAGGCTCGGAGGAAGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CCA 72 bp CTGCCTGATTTGCCGTTGACCCGGAGCAGCCAGGGCTaGTCCTCGGGCCGGAACTCCTTGAGGACGATGCCG +
Preference number: 6 (lower is better)
Translates to: LPDLPLTRSSQG*SSGRNSLRTMP
Trigger: CGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CCA 72 bp GCATCGGACGACATCTCCAGGTCGTCCTCCAGGTCGTaGATGCGCAGCTCGCTCGCCTTCCTGCGGCCACGT +
Preference number: 6 (lower is better)
Translates to: ASDDISRSSSRS*MRSSLAFLRPR
Trigger: ACGTGGCCGCAGGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGACCTGGAGATGTCGTCCGATGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
CDS CCA 72 bp ACAGGCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTTaGCTGCAGGCATCTCGCTCACCCGCTTCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: TGSGVPCPAATA*LQASRSPASLA
Trigger: AGCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 72 bp GATGGTGGCTGGGGTGTCGACTTCCCAGACAGGCTCTaGGGTCCCGTGTCCAGCCGCAACCGCTTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: DGGWGVDFPDRL*GPVSSRNRLAA
Trigger: TGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 72 bp CGGAGCAGCCAGGGCTGGTCCTCGGGCCGGAACTCCTaGAGGACGATGCCGTACTTCTTCCTCCGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: RSSQGWSSGRNS*RTMPYFFLRAS
Trigger: GGAGGCTCGGAGGAAGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp GTGCGATGCCGGGCCAGCGGTGTGAAATTGTACCAGTaGTGCACGGGGAAGGCCTCGAAGGCCCCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: VRCRASGVKLYQ*CTGKASKAPSG
Trigger: CCCCGACGGGGCCTTCGAGGCCTTCCCCGTGCACAACTGGTACAATTTCACACCGCTGGCCCGGCATCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS TCA 72 bp GGAGCAGCCAGGGCTGGTCCTCGGGCCGGAACTCCTTaGGGACGATGCCGTACTTCTTCCTCCGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GAARAGPRAGTP*GRCRTSSSEPP
Trigger: AGGAGGCTCGGAGGAAGAAGTACGGCATCGTCCTCAAGGAGTTCCGGCCCGAGGACCAGCCCTGGCTGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS GCA 72 bp CGGACGACATCTCCAGGTCGTCCTCCAGGTCGTGGATaGGCAGCTCGCTCGCCTTCCTGCGGCCACGTTTCT +
Preference number: 6 (lower is better)
Translates to: RTTSPGRPPGRG*AARSPSCGHVS
Trigger: AGAAACGTGGCCGCAGGAAGGCGAGCGAGCTGCGCATCCACGACCTGGAGGACGACCTGGAGATGTCGTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
CDS CAA 90 bp GACTTCCCAGACAGGCTCTGGGGTCCCGTGTCCAGCCGCAACCGCTaGGCTGCAGGCATCTCGCTCACCCGCTTCCCTTGCTCGAGTTTG +
Preference number: 6 (lower is better)
Translates to: DFPDRLWGPVSSRNR*AAGISLTRFPCSSL
Trigger: CAAACTCGAGCAAGGGAAGCGGGTGAGCGAGATGCCTGCAGCCAAGCGGTTGCGGCTGGACACGGGACCCCAGAGCCTGTCTGGGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 90 bp CATCGCCTACCCTTGGGCCCCTCCTCCTGCTGCGGCGCCTTGGCCTaGCTCTCAGGCTCTTCTTGGGAGCTACTGGAGCCGTCTGACATG +
Preference number: 6 (lower is better)
Translates to: HRLPLGPSSCCGALA*LSGSSWELLEPSDM
Trigger: CATGTCAGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAAGGGTAGGCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594965.1
CDS TCA 72 bp TCAGCACCTTGTTCCTCTTCCTGCCTGATTTGCCGTTaGCCCGGAGCAGCCAGGGCTGGTCCTCGGGCCGGA +
Preference number: 6 (lower is better)
Translates to: SAPCSSSCLICR*PGAARAGPRAG
Trigger: TCCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGAGGAACAAGGTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS GCA 72 bp CACTCCTCCTCGGCCTCCTCGGCAGTGAGCGTGCGATaGCGGGCCAGCGGTGTGAAATTGTACCAGTTGTGC +
Preference number: 6 (lower is better)
Translates to: HSSSASSAVSVR*RASGVKLYQLC
Trigger: GCACAACTGGTACAATTTCACACCGCTGGCCCGGCATCGCACGCTCACTGCCGAGGAGGCCGAGGAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS CCA 72 bp CTGCTAGGGCCTAGGGCCGCCATGGGCAATGGTCAGTaGTTCCGATCTGGTCCGACCCGGGTTCCTTTCGTC +
Preference number: 6 (lower is better)
Translates to: LLGPRAAMGNGQ*FRSGPTRVPFV
Trigger: GACGAAAGGAACCCGGGTCGGACCAGATCGGAACCACTGACCATTGCCCATGGCGGCCCTAGGCCCTAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CCA 72 bp TCGCCGCTGTTGGGTGTTGTCTTGCCTGATGGTGGCTaGGGTGTCGACTTCCCAGACAGGCTCTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SPLLGVVLPDGG*GVDFPDRLWGP
Trigger: GGGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGACAACACCCAACAGCGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594965.1
CDS CCA 72 bp CTGTGCCTGAGCGAGGACCCCAACCCTAGGCGCCTCTaGCGCTGGGAAAAGGTAACCGGAAGAGGCGCTCAA +
Preference number: 6 (lower is better)
Translates to: LCLSEDPNPRRL*RWEKVTGRGAQ
Trigger: TTGAGCGCCTCTTCCGGTTACCTTTTCCCAGCGCCAGAGGCGCCTAGGGTTGGGGTCCTCGCTCAGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS CCA 72 bp CACCCGCTGTTGGGTGTTGTCTTGCCTGATGGTGGCTaGGGTGTCGACTTCCCAGACAGGCTCTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: HPLLGVVLPDGG*GVDFPDRLWGP
Trigger: GGGACCCCAGAGCCTGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGACAACACCCAACAGCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CAA 72 bp ATGCCGTACTTCTTCCTCCGAGCCTCCTCCCGAAGCTaGCGGTTGAACTCACTGCCCGCGCCCGATTCGGGC +
Preference number: 6 (lower is better)
Translates to: MPYFFLRASSRS*RLNSLPAPDSG
Trigger: GCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGTACGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp GCAGTGAGCGTGCGATGCCGGGCCAGCGGTGTGAAATaGTACCAGTTGTGCACGGGGAAGGCCTCGAAGGCC +
Preference number: 6 (lower is better)
Translates to: AVSVRCRASGVK*YQLCTGKASKA
Trigger: GGCCTTCGAGGCCTTCCCCGTGCACAACTGGTACAATTTCACACCGCTGGCCCGGCATCGCACGCTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394456.10
ENST00000595047.5
CDS CAA 72 bp TGCGGGGTGGGTGCCTTCTTCTCCTCCTCCTCCTCCTaGTCCTCCTCAGGCGGCTTCTCCTCCTCACTCTCC +
Preference number: 6 (lower is better)
Translates to: CGVGAFFSSSSS*SSSGGFSSSLS
Trigger: GGAGAGTGAGGAGGAGAAGCCGCCTGAGGAGGACAAGGAGGAGGAGGAGGAGAAGAAGGCACCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CAA 72 bp TTCAGCACCTTGTTCCTCTTCCTGCCTGATTTGCCGTaGACCCGGAGCAGCCAGGGCTGGTCCTCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: FSTLFLFLPDLP*TRSSQGWSSGR
Trigger: CCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGAGGAACAAGGTGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593678.5
CDS CAA 90 bp TCATCGACACCCTTGGGCCCCTCCTCCTGCTGCGGCGCCTTGGCCTaGCTCTCAGGCTCTTCTTGGGAGCTACTGGAGCCGTCTGACATG +
Preference number: 6 (lower is better)
Translates to: SSTPLGPSSCCGALA*LSGSSWELLEPSDM
Trigger: CATGTCAGACGGCTCCAGTAGCTCCCAAGAAGAGCCTGAGAGCAAGGCCAAGGCGCCGCAGCAGGAGGAGGGGCCCAAGGGTGTCGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000595047.5
CDS CAA 90 bp CGGCTGTTGCCCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTaGGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGTTGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RLLPLELPPDGFRSL*GGVFFFCRGQGWEV
Trigger: CACCTCCCAACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGGCAACAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CAA 90 bp ACGATGCCGTACTTCTTCCTCCGAGCCTCCTCCCGAAGCTTGCGGTaGAACTCACTGCCCGCGCCCGATTCGGGCATCTCCTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: TMPYFFLRASSRSLR*NSLPAPDSGISSSW
Trigger: CCAAGAGGAGGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGTACGGCATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 90 bp TTGAGGACGATGCCGTACTTCTTCCTCCGAGCCTCCTCCCGAAGCTaGCGGTTGAACTCACTGCCCGCGCCCGATTCGGGCATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LRTMPYFFLRASSRS*RLNSLPAPDSGISS
Trigger: GGAGGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGTACGGCATCGTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS TCA 72 bp ACTTCTTCCTCCGAGCCTCCTCCCGAAGCTTGCGGTTaGACTCACTGCCCGCGCCCGATTCGGGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: TSSSEPPPEACG*THCPRPIRASP
Trigger: AGGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp TACTTCTTCCTCCGAGCCTCCTCCCGAAGCTTGCGGTaGAACTCACTGCCCGCGCCCGATTCGGGCATCTCC +
Preference number: 6 (lower is better)
Translates to: YFFLRASSRSLR*NSLPAPDSGIS
Trigger: GGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGCAAGCTTCGGGAGGAGGCTCGGAGGAAGAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp TTCTTGATGCCCTTGAACTTCCTGCCTGATTTGCCGTaGACCCGGAGCAGCCAGGGCTGGTCCTCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: FLMPLNFLPDLP*TRSSQGWSSGR
Trigger: CCGGCCCGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGTTCAAGGGCATCAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CAA 72 bp CCCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTaGGGTGGCGTCTTCTTCTTCGCCATGAAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: PLELPPDGFRSL*GGVFFFAMKRA
Trigger: AGCCCTCTTCATGGCGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594965.1
CDS CAA 72 bp CCCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTaGGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: PLELPPDGFRSL*GGVFFFCRGQG
Trigger: ACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS GCA 72 bp CAGTCACCTGCACGTCGCCGCTGTTGGGTGTTGTCTTaGCTGATGGTGGCTGGGGTGTCGACTTCCCAGACA +
Preference number: 6 (lower is better)
Translates to: QSPARRRCWVLS*LMVAGVSTSQT
Trigger: TGTCTGGGAAGTCGACACCCCAGCCACCATCAGGCAAGACAACACCCAACAGCGGCGACGTGCAGGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594965.1
CDS CCA 72 bp CCCTTGAGCTCCCTCCCGACGGCTTCCGCTCTCTCTTaGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGTT +
Preference number: 6 (lower is better)
Translates to: PLSSLPTASALS*VASSSSAEVRV
Trigger: AACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAAGAGAGAGCGGAAGCCGTCGGGAGGGAGCTCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CAA 72 bp CCTCCCTTCTTGATGCCCTTGAACTTCCTGCCTGATTaGCCGTTGACCCGGAGCAGCCAGGGCTGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PPFLMPLNFLPD*PLTRSSQGWSS
Trigger: CGAGGACCAGCCCTGGCTGCTCCGGGTCAACGGCAAATCAGGCAGGAAGTTCAAGGGCATCAAGAAGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CAA 90 bp GCGGTTGAACTCACTGCCCGCGCCCGATTCGGGCATCTCCTCCTCTaGGTAGATTTTCTTGTTGCTCAAGTCCCGCTCCAGCCGAGCCTG +
Preference number: 6 (lower is better)
Translates to: AVELTARARFGHLLL*VDFLVAQVPLQPSL
Trigger: CAGGCTCGGCTGGAGCGGGACTTGAGCAACAAGAAAATCTACCAAGAGGAGGAGATGCCCGAATCGGGCGCGGGCAGTGAGTTCAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000595047.5
ENST00000598607.1
CDS CAA 90 bp TTCTTCTCCTGCGGGGTGGGTGCCTTCTTCTCCTCCTCCTCCTCCTaGTCCTCCTCAGGCGGCTTCTCCTCCTCACTCTCCTCACTACTG +
Preference number: 6 (lower is better)
Translates to: FFSCGVGAFFSSSSS*SSSGGFSSSLSSLL
Trigger: CAGTAGTGAGGAGAGTGAGGAGGAGAAGCCGCCTGAGGAGGACAAGGAGGAGGAGGAGGAGAAGAAGGCACCCACCCCGCAGGAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
ENST00000594965.1
CDS CCA 72 bp TTGGGTGGCGTCTTCTTCTTCTGCAGAGGTCAGGGTTaGGAGGTGGGTGAGTCTGCAAACAGACGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LGGVFFFCRGQG*EVGESANRRPG
Trigger: GCCTGGGCGTCTGTTTGCAGACTCACCCACCTCCCAACCCTGACCTCTGCAGAAGAAGAAGACGCCACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594213.5
CDS CCA 72 bp ATCATCTTGCGCTCGGGGTTGAGTCGCTTGAGGATCTaGGCCAACACGTTCACTGTCTGCTCGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: IILRSGLSRLRI*ANTFTVCSLLS
Trigger: GCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CCA 72 bp ACTCTCCTCACTACTGTCGCTCTGCTCATCGACACCTaGGAGGGGCAGGGTATGAGCAAGAGCAGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: TLLTTVALLIDT*EGQGMSKSREA
Trigger: TGCTTCCCTGCTCTTGCTCATACCCTGCCCCTCCCAGGTGTCGATGAGCAGAGCGACAGTAGTGAGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594965.1
CDS GCA 72 bp AGTCGCTTGAGGATCTGGGCCAACACGTTCACTGTCTaGTCGCTGCTCAGCCCTGTCTTCTTGGTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SRLRIWANTFTV*SLLSPVFLVWN
Trigger: GTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 72 bp TTGTCGTTGATCATCTTGCGCTCGGGGTTGAGTCGCTaGAGGATCTGGGCCAACACGTTCACTGTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: LSLIILRSGLSR*RIWANTFTVCS
Trigger: CGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 90 bp TGGGCCAACACGTTCACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTaGGTCTGGAACTTTTTCAGCAGGTCCTTAGTGGTCATGGGCTTC +
Preference number: 6 (lower is better)
Translates to: WANTFTVCSLLSPVF*VWNFFSRSLVVMGF
Trigger: GAAGCCCATGACCACTAAGGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 90 bp AAGTGCATTTTGTCGTTGATCATCTTGCGCTCGGGGTTGAGTCGCTaGAGGATCTGGGCCAACACGTTCACTGTCTGCTCGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: KCILSLIILRSGLSR*RIWANTFTVCSLLS
Trigger: GCTGAGCAGCGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CCA 72 bp TTCTTAGGAACTCGAACGACGTATTCAGTGACATTCTaGCTGCTAGGGCCTAGGGCCGCCATGGGCAATGGT +
Preference number: 6 (lower is better)
Translates to: FLGTRTTYSVTF*LLGPRAAMGNG
Trigger: ACCATTGCCCATGGCGGCCCTAGGCCCTAGCAGCCAGAATGTCACTGAATACGTCGTTCGAGTTCCTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000595047.5
ENST00000598607.1
CDS CCA 72 bp ACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTTGGTCTaGAACTTTTTCAGCAGGTCCTTAGTGGTCATGGGC +
Preference number: 6 (lower is better)
Translates to: TVCSLLSPVFLV*NFFSRSLVVMG
Trigger: GCCCATGACCACTAAGGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 72 bp TCCTTGAGGGAGAAGTGCATTTTGTCGTTGATCATCTaGCGCTCGGGGTTGAGTCGCTTGAGGATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SLREKCILSLII*RSGLSRLRIWA
Trigger: GGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 72 bp TGGACCAAGCCTCACTCCTTGAGGGAGAAGTGCATTTaGTCGTTGATCATCTTGCGCTCGGGGTTGAGTCGC +
Preference number: 6 (lower is better)
Translates to: WTKPHSLREKCI*SLIILRSGLSR
Trigger: GCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 90 bp TTGAGGGAGAAGTGCATTTTGTCGTTGATCATCTTGCGCTCGGGGTaGAGTCGCTTGAGGATCTGGGCCAACACGTTCACTGTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: LREKCILSLIILRSG*SRLRIWANTFTVCS
Trigger: CGAGCAGACAGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 90 bp AAGCCTCACTCCTTGAGGGAGAAGTGCATTTTGTCGTTGATCATCTaGCGCTCGGGGTTGAGTCGCTTGAGGATCTGGGCCAACACGTTC +
Preference number: 6 (lower is better)
Translates to: KPHSLREKCILSLII*RSGLSRLRIWANTF
Trigger: GAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 90 bp TATTGGACCAAGCCTCACTCCTTGAGGGAGAAGTGCATTTTGTCGTaGATCATCTTGCGCTCGGGGTTGAGTCGCTTGAGGATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: YWTKPHSLREKCILS*IILRSGLSRLRIWA
Trigger: GGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGGTCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CCA 72 bp TCCCAGCTTCATTCAGCCTGTTTTGCCTGGCAACACTaGATACGGAAGACTCCAAGGATTCCCAGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: SQLHSACFAWQH*IRKTPRIPSLP
Trigger: TGGCAGACTGGGAATCCTTGGAGTCTTCCGTATCCAGTGTTGCCAGGCAAAACAGGCTGAATGAAGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS CAA 72 bp ACGTTCACTGTCTGCTCGCTGCTCAGCCCTGTCTTCTaGGTCTGGAACTTTTTCAGCAGGTCCTTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: TFTVCSLLSPVF*VWNFFSRSLVV
Trigger: GACCACTAAGGACCTGCTGAAAAAGTTCCAGACCAAGAAGACAGGGCTGAGCAGCGAGCAGACAGTGAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 72 bp AAGCCTCACTCCTTGAGGGAGAAGTGCATTTTGTCGTaGATCATCTTGCGCTCGGGGTTGAGTCGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: KPHSLREKCILS*IILRSGLSRLR
Trigger: CCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CAA 72 bp AAGTGCATTTTGTCGTTGATCATCTTGCGCTCGGGGTaGAGTCGCTTGAGGATCTGGGCCAACACGTTCACT +
Preference number: 6 (lower is better)
Translates to: KCILSLIILRSG*SRLRIWANTFT
Trigger: AGTGAACGTGTTGGCCCAGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS GCA 72 bp ATGTATTGGACCAAGCCTCACTCCTTGAGGGAGAAGTaGATTTTGTCGTTGATCATCTTGCGCTCGGGGTTG +
Preference number: 6 (lower is better)
Translates to: MYWTKPHSLREK*ILSLIILRSGL
Trigger: CAACCCCGAGCGCAAGATGATCAACGACAAAATGCACTTCTCCCTCAAGGAGTGAGGCTTGGTCCAATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394456.10
ENST00000593678.5
ENST00000594213.5
CDS CCA 72 bp TGGTTGTATTCCCAGCTTCATTCAGCCTGTTTTGCCTaGCAACACTGGATACGGAAGACTCCAAGGATTCCC +
Preference number: 6 (lower is better)
Translates to: WLYSQLHSACFA*QHWIRKTPRIP
Trigger: GGGAATCCTTGGAGTCTTCCGTATCCAGTGTTGCCAGGCAAAACAGGCTGAATGAAGCTGGGAATACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595047.5
CDS GCA 72 bp TTTTTGGTTGTATTCCCAGCTTCATTCAGCCTGTTTTaGCTGGCAACACTGGATACGGAAGACTCCAAGGAT +
Preference number: 6 (lower is better)
Translates to: FLVVFPASFSLF*LATLDTEDSKD
Trigger: ATCCTTGGAGTCTTCCGTATCCAGTGTTGCCAGGCAAAACAGGCTGAATGAAGCTGGGAATACAACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595047.5