RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GTF2E1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153767

Ensembl transcript IDs: ENST00000283875.6, ENST00000469772.5, ENST00000484715.1, ENST00000492959.1, ENST00000497393.1

Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTaGTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAA +
Preference number: 1 (lower is better)
Translates to: TVVTARKGRILSTLP*WESFWHKSQTLYHQ
Trigger: TTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTaGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCT +
Preference number: 1 (lower is better)
Translates to: VVTARKGRILSTLPC*ESFWHKSQTLYHQS
Trigger: AGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR GCA 90 bp GGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTaGACAAGGATGGACAGTTGCTTACATCAAGAGGGGCAGAAAGCC +
Preference number: 1 (lower is better)
Translates to: GKVSGIKVKLSTINL*TRMDSCLHQEGQKA
Trigger: GGCTTTCTGCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CCA 90 bp AGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTTTCTaGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCACAAGGAT +
Preference number: 1 (lower is better)
Translates to: RKGRILSTLPCWESF*HKSQTLYHQSLHKD
Trigger: ATCCTTGTGCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR GCA 90 bp TTCCAAATCAGACTAACTGACACAGTTCTAAGGCACTGTTACCAATaGTTGTCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGT +
Preference number: 1 (lower is better)
Translates to: FQIRLTDTVLRHCYQ*LSLFNPSQRLLVLR
Trigger: ACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAGTCTGATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR TCA 90 bp GGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTaGCACAGTTCTAAGGCACTGTTACCAATGCTTGTCACTCTTCAA +
Preference number: 1 (lower is better)
Translates to: GPVSALHKGFPNQTN*HSSKALLPMLVTLQ
Trigger: TTGAAGAGTGACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR GCA 90 bp TGGCAAGCTGCTTTGGTGGGCAGCAGTATAAGAAATTGTTTGGAATaGCTGGCTAGAACAGATAAAATGGATGTGATCAGTGAATTATTG +
Preference number: 1 (lower is better)
Translates to: WQAALVGSSIRNCLE*LARTDKMDVISELL
Trigger: CAATAATTCACTGATCACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCTGCCCACCAAAGCAGCTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 90 bp TGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTaGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: WESFWHKSQTLYHQS*HKDGQLLTSRGAES
Trigger: GCTTTCTGCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 90 bp GACTGTTGGCAAGCTGCTTTGGTGGGCAGCAGTATAAGAAATTGTTaGGAATGCCTGGCTAGAACAGATAAAATGGATGTGATCAGTGAA +
Preference number: 2 (lower is better)
Translates to: DCWQAALVGSSIRNC*ECLARTDKMDVISE
Trigger: TTCACTGATCACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCTGCCCACCAAAGCAGCTTGCCAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 90 bp CAAATCAGACTAACTGACACAGTTCTAAGGCACTGTTACCAATGCTaGTCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCA +
Preference number: 2 (lower is better)
Translates to: QIRLTDTVLRHCYQC*SLFNPSQRLLVLRP
Trigger: TGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAGTCTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR TCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCCATTCCTTTTTGAACTaGGCATTAGAGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGHSFLN*ALEKGE
Trigger: TTCTCCTTTCTCTAATGCTCAGTTCAAAAAGGAATG...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR GCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGACAAGGATGGACAGTTaGTTACATCAAGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSIRNCLECLARTDKMDVTRMDS*LHQEGQ
Trigger: CTGCCCCTCTTGATGTAAGCAACTGTCCATCCTTGT...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTCTACCATCAATCTTTaGACAAGGATGGACAGTTGC +
Preference number: 2 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTSTINL*TRMDSC
Trigger: GCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR CCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGTGCTGGGAAAGTTTCTaGCATAAAAGTCAAACTCTC +
Preference number: 2 (lower is better)
Translates to: SSIRNCLECLARTDKMDVCWESF*HKSQTL
Trigger: GAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCA...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR CAA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCAGAAAATACAGCACTTaGGGAGGCCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTRKYST*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAAAGTGCTGTATTTTCT...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR GCA 72 bp ACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTaGTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTC +
Preference number: 3 (lower is better)
Translates to: TARKGRILSTLP*WESFWHKSQTL
Trigger: GAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CCA 72 bp GCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTaGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTAC +
Preference number: 3 (lower is better)
Translates to: ARKGRILSTLPC*ESFWHKSQTLY
Trigger: GTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTCTCAGCACCCTACCTaGCTGGGAAAGTTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTSQHPT*LGKFLA
Trigger: TGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR GCA 72 bp AGACTAACTGACACAGTTCTAAGGCACTGTTACCAATaGTTGTCACTCTTCAACCCTTCACAGAGACTTCTT +
Preference number: 3 (lower is better)
Translates to: RLTDTVLRHCYQ*LSLFNPSQRLL
Trigger: AAGAAGTCTCTGTGAAGGGTTGAAGAGTGACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CCA 72 bp AGGATTCTCAGCACCCTACCTTGCTGGGAAAGTTTCTaGCATAAAAGTCAAACTCTCTACCATCAATCTTTG +
Preference number: 3 (lower is better)
Translates to: RILSTLPCWESF*HKSQTLYHQSL
Trigger: CAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCTCTACCATCAATCTTaGCACAAGGATGGACAGTTG +
Preference number: 3 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTLYHQS*HKDGQL
Trigger: CAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR TCA 72 bp TCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTaGCACAGTTCTAAGGCACTGTTACCAATGCTTGTC +
Preference number: 3 (lower is better)
Translates to: SALHKGFPNQTN*HSSKALLPMLV
Trigger: GACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CCA 72 bp AACTGTTTCCTGAGGTTACAATGCTCAATGGTATACTaGATGCACCCTAAAATACTGTGTCTGACAAAAATT +
Preference number: 3 (lower is better)
Translates to: NCFLRLQCSMVY*MHPKILCLTKI
Trigger: AATTTTTGTCAGACACAGTATTTTAGGGTGCATCCAGTATACCATTGAGCATTGTAACCTCAGGAAACAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTACCTTTGGTGGCCCATaGTTCCCGGTGGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: VVTARKGRILSTLPCWESTFGGP*FPVVPT
Trigger: GGTGGGCACCACCGGGAAGCATGGGCCACCAAAGGT...ACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTTCTTCTGGTGTCATCTaGGCCACTAGCTCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: VVTARKGRILSTLPCWESSSGVI*ATSSGR
Trigger: ACGGCCAGAGCTAGTGGCCCAGATGACACCAGAAGA...ACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTCCGCTTCAATGCTGCTaGAACTTCAGTGAGGACATC +
Preference number: 4 (lower is better)
Translates to: VVTARKGRILSTLPCWESPLQCC*NFSEDI
Trigger: GATGTCCTCACTGAAGTTCCAGCAGCATTGAAGCGG...ACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCCGCTTTCTGAGTCACTaGCATTGGCAGCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGRFLSH*HWQRSL
Trigger: CAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCG...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCGCCCATGCTTCCCGGTaGTGCCCACCTGCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCAHASR*CPPARL
Trigger: TAGCCTAGCAGGTGGGCACCACCGGGAAGCATGGGC...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCATGCACAGCCACAGCTaGCGGACGGGGTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCMHSHS*RTGWRI
Trigger: GATTCTCCACCCCGTCCGGCAGCTGTGGCTGTGCAT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGACGGCCAGCCACCATaGCAATGGGGTCATCTGCTA +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEDGQPP*QWGHLL
Trigger: TAGCAGATGACCCCATTGTCATGGTGGCTGGCCGTC...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCATGCTTCCCGGTGGTaGCCACCTGCTAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTHASRW*PPARLA
Trigger: TGCTAGCCTAGCAGGTGGGCACCACCGGGAAGCATG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCCTCGTGAATGAGCAGTaGTCGCATGACCTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGLVNEQ*SHDLFV
Trigger: AACGAAGAGGTCATGCGAGCACTGCTCATTCACGAG...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCCCGAGATCACGCCATTaGACTCCAGCCTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCPRSRH*TPAWGT
Trigger: TGTACCCCAGGCTGGAGTGCAATGGCGTGATCTCGG...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCAGTAGTTATGGCGAGTaGTTTTCCCGTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGSSYGE*FSRLQQ
Trigger: CTGCTGCAGACGGGAAAACCACTCGCCATAACTACT...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCAGGAAGGACCTTTGGTaGCCCATGCTTCCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCRKDLW*PMLPGG
Trigger: ACCACCGGGAAGCATGGGCCACCAAAGGTCCTTCCT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCAGATTTCCCTTCCAGTaGGGCTCGATGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGRFPFQ*GSMKIF
Trigger: GAAGATCTTCATCGAGCCTCACTGGAAGGGAAATCT...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCACTGGTCTCGCTTTCTaGGTCACTGCCATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCTGLAF*VTAIGS
Trigger: GCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCCCAAGGCATGCTCAATaGCATAAAATCCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGPRHAQ*HKIPGS
Trigger: TGATCCGGGGATTTTATGGCATTGAGCATGCCTTGG...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTTTGTTCATTAAACCTTaGCAAAAGTGTGCGTGCATC +
Preference number: 4 (lower is better)
Translates to: VVTARKGRILSTLPCWESLFIKP*QKCACI
Trigger: GATGCACGCACACTTTTGGCAAGGTTTAATGAACAA...ACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCTGCTGGAACTTCAGTaGGGACATCTGGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTLLELQ*GHLGLP
Trigger: TGGCAGACCCAGATGTCCTCACTGAAGTTCCAGCAG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCCCCCAATCAGTGATTTaGCTGTTGGCAAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTPQSVI*LLASCF
Trigger: AAAGCAGCTTGCCAACAGTCAAATCACTGATTGGGG...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCTCCAGCAGTAGTTGCTaGATGGTCCTTGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTSSSSC*MVLALF
Trigger: AAACAGAGCAAGGACCATGCAGCAACTACTGCTGGA...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGCTCACGCTCCTGAAATaGGTCCATATCTATGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQELTLLK*VHIYAP
Trigger: GGGGGCATAGATATGGACGCATTTCAGGAGCGTGAG...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCATACAAGGCGAATCCTaGAACACTCCCACTACAGCT +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTIQGES*NTPTTA
Trigger: AGCTGTAGTGGGAGTGTTCCAGGATTCGCCTTGTAT...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCATAGGAAGGACCTTTaGTGGCCCATGCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTHRKDL*WPMLPG
Trigger: ACCGGGAAGCATGGGCCACCAAAGGTCCTTCCTATG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGCTGAGTCACTGCCATTaGCAGCGGTCACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSIRNCLECLARTDKMDVLSHCH*QRSLEQ
Trigger: CTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAG...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCCATCATCTGACTCACTaGTCTCGCTTTCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTHHLTH*SRFLSH
Trigger: GTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATG...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCTCACACAGGAGTTCCTaGTCAAGATGTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCSHRSS*SRCPRP
Trigger: TGGCCTTGGACATCTTGATCAGGAACTCCTGTGTGA...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATTTGCTGCATGGTCCTTaGTCTGTTTCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNLLHGP*SVSGLG
Trigger: TCCCAGCCCTGAAACAGAGCAAGGACCATGCAGCAA...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATAGCTCCAGCAGTAGTTaGTGCATGGTCCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNSSSSS*CMVLAL
Trigger: CAGAGCAAGGACCATGCAGCAACTACTGCTGGAGCT...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTCCTCTTCTCGTTTATaGACAGCCACAGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTSSSRL*TATAAG
Trigger: TCCGGCAGCTGTGGCTGTGCATAAACGAGAAGAGGA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGCTCAGCACCCTACCTTaGTGGGAAAGTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQELSTLP*WESFWH
Trigger: ATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAG...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp GTAGTGACAGCAAGGAAGGGTAGGATTCTCAGCACCCTACCTTGCTGGGAAAGTTATTCTGTTGATTTCTaGTGGAATGGCCTCATTAAA +
Preference number: 4 (lower is better)
Translates to: VVTARKGRILSTLPCWESYSVDF*WNGLIK
Trigger: TTTAATGAGGCCATTCCAGCAGAAATCAACAGAATA...ACTTTCCCAGCAAGGTAGGGTGCTGAGAATCCTACCCTTCCTTGCTGTCACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGCCCGGATCACATACTTaGCTAACCGCTTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEPGSHT*LTASML
Trigger: CAGCATTGAAGCGGTTAGCCAAGTATGTGATCCGGG...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCGCAGTAGTTGCTGCATaGTCCTTGCTCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCAVVAA*SLLCFR
Trigger: CCTGAAACAGAGCAAGGACCATGCAGCAACTACTGC...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 72 bp CTAACTGACACAGTTCTAAGGCACTGTTACCAATGCTaGTCACTCTTCAACCCTTCACAGAGACTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LTDTVLRHCYQC*SLFNPSQRLLV
Trigger: GACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGACAAGCATTGGTAACAGTGCCTTAGAACTGTGTCAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTGCTTCCGATCAAACTTaGGCAGCTCCAGCATATCCT +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTASDQT*AAPAYP
Trigger: AGGATATGCTGGAGCTGCTCAAGTTTGATCGGAAGC...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCCCTCCCCTTACATATTaGTCCATCTCAATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTPPLTY*SISILR
Trigger: CCTCAAAATTGAGATGGATCAATATGTAAGGGGAGG...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGACAAGGATGGACAGTTaGTTACATCAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQETRMDS*LHQEGQ
Trigger: CTGCCCCTCTTGATGTAAGCAACTGTCCATCCTTGT...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCTCTACCATCAATCTTTaGACAAGGATGGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTSTINL*TRMDSC
Trigger: GCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGA...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCTTCCTGAGGTTACAATaGTCAATGGTATACTGGATG +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGFLRLQ*SMVYWM
Trigger: CATCCAGTATACCATTGAGCATTGTAACCTCAGGAA...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCGAACCATATGCCCCTTaGACAGTGCTTTCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCEPYAP*TVLSLN
Trigger: GTTGAGAGAAAGCACTGTCCAAGGGGCATATGGTTC...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 72 bp CAAGCTGCTTTGGTGGGCAGCAGTATAAGAAATTGTTaGGAATGCCTGGCTAGAACAGATAAAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: QAALVGSSIRNC*ECLARTDKMDV
Trigger: CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCTGCCCACCAAAGCAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGCCTTCCTCACGCTCCTaGAATGCGTCCATATCTATG +
Preference number: 4 (lower is better)
Translates to: SSIRNCLECLARTDKMDVPSSRS*NASISM
Trigger: CATAGATATGGACGCATTTCAGGAGCGTGAGGAAGG...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATGAAGTCTTTTTCTCGTaGATGAGCAGTGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNEVFFS*MSSARM
Trigger: CATGCGAGCACTGCTCATTCACGAGAAAAAGACTTC...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCATCTTCAGAACCATATaGCCCTTGGACAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCIFRTI*PLDSAF
Trigger: GAAAGCACTGTCCAAGGGGCATATGGTTCTGAAGAT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGACAATGGGGTCATCTaGTACTTCTTCAAACTCGTC +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEDNGVI*YFFKLV
Trigger: GACGAGTTTGAAGAAGTAGCAGATGACCCCATTGTC...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCAGGCACTGTTACCAATaGTTGTCACTCTTCAACCCT +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCRHCYQ*LSLFNP
Trigger: AGGGTTGAAGAGTGACAAGCATTGGTAACAGTGCCT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATGGGCTGGGATTTCTGTaGGTTCTGGCTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNGLGFL*VLAQVF
Trigger: AAATACTTGAGCCAGAACCCACAGAAATCCCAGCCC...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCCACTGAACCAGCCATaGCAGAGGAAGTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTPLNQP*QRKSFS
Trigger: AGAAAAAGACTTCCTCTGCCATGGCTGGTTCAGTGG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp TCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGGCATTGTTTGGAATGCCTaGCTAGAACAGATAAAATGG +
Preference number: 4 (lower is better)
Translates to: SLPSIFAQGWTVAYIKRGIVWNA*LEQIKW
Trigger: CCATTTTATCTGTTCTAGCCAGGCATTCCAAACAAT...GCCCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCTGCTCAATGGTATACTaGATGCACCCTAAAATACTG +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTCSMVY*MHPKIL
Trigger: CAGTATTTTAGGGTGCATCCAGTATACCATTGAGCA...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
3UTR CAA 72 bp TTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTaGCACAAGGATGGACAGTTGCTTACATCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FWHKSQTLYHQS*HKDGQLLTSRG
Trigger: CCCTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATTTTTCCCCCAATCAGTaGTTTGACTGTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNFSPNQ*FDCWQA
Trigger: AGCTTGCCAACAGTCAAATCACTGATTGGGGGAAAA...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCAGAGACAGCCTTCAATaGTGTTTAGAAAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCRDSLQ*CLERGR
Trigger: TCTCCCTCTTTCTAAACATCATTGAAGGCTGTCTCT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGATTTCTGTGGGTTCTaGCTCAAGTATTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEDFCGF*LKYFIG
Trigger: GCCTATGAAATACTTGAGCCAGAACCCACAGAAATC...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGGGTTACAATGCTCAATaGTATACTGGATGCACCCTA +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEGYNAQ*YTGCTL
Trigger: TAGGGTGCATCCAGTATACCATTGAGCATTGTAACC...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATTGTCTCCCGAAGCAATaGATAAATGGGCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNCLPKQ*INGLNL
Trigger: CAAATTGAGCCCATTTATGCATTGCTTCGGGAGACA...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGCATGCGTTGTCCCATTaGTATATATGCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQEHALSH*YICFLF
Trigger: GAAAAGGAAGCATATATAGCAATGGGACAACGCATG...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTAGAGGTCCTCAAACATaGGTTGTCCCATTGCTATAT +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTRGPQT*VVPLLY
Trigger: ATATAGCAATGGGACAACGCATGTTTGAGGACCTCT...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AAACTCTCTACCATCAATCTTTGCACAAGGATGGACAGTTGCTTACATCAAGAGTCTTCTACCTCTGTATaGCAAAAAGTACAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KLSTINLCTRMDSCLHQESSTSV*QKVQRK
Trigger: TTTCCGCTGTACTTTTTGCCATACAGAGGTAGAAGA...CTCTTGATGTAAGCAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGAGCACCCTACCTTGCTaGGAAAGTTTCTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: SSIRNCLECLARTDKMDVSTLPC*ESFWHK
Trigger: TTTATGCCAGAAACTTTCCCAGCAAGGTAGGGTGCT...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCATTGTAGTAAACAGATaGATGGGAAGGATTTACCTT +
Preference number: 4 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTIVVNR*MGRIYL
Trigger: AAGGTAAATCCTTCCCATCCATCTGTTTACTACAAT...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATAAAACTGATCGAAGTTaGTTCCGATCAAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNKTDRS*FRSNLS
Trigger: GCTCAAGTTTGATCGGAAGCAACTTCGATCAGTTTT...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCAATGGTATACTGGATaGACCCTAAAATACTGTGTC +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTQWYTG*TLKYCV
Trigger: GACACAGTATTTTAGGGTGCATCCAGTATACCATTG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTGCTGGGAAAGTTTCTaGCATAAAAGTCAAACTCTC +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTCWESF*HKSQTL
Trigger: GAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCATTCCTTTTTGAACTaGGCATTAGAGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTHSFLN*ALEKGE
Trigger: TTCTCCTTTCTCTAATGCTCAGTTCAAAAAGGAATG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR TCA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGGAAGGATTTACCTTATaGACTTCCCTCACTCATTTC +
Preference number: 4 (lower is better)
Translates to: SSIRNCLECLARTDKMDVEGFTL*TSLTHF
Trigger: GAAATGAGTGAGGGAAGTTCATAAGGTAAATCCTTC...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTCCCATTGCTATATATaGTTCCTTTTCTTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTSHCYI*FLFFWC
Trigger: ACACCAGAAGAAAAGGAAGCATATATAGCAATGGGA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCAGAAATTGTTTGGAATaGCTGGCTAGAACAGATAAA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCRNCLE*LARTDK
Trigger: TTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR GCA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCTTAGGGAAAATACCATaGTACATATCAGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCLGKIP*YISEPK
Trigger: TTTGGGTTCTGATATGTAGCATGGTATTTTCCCTAA...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CCA 90 bp CAGCCACAGCTGCCGGACGGGGTGGAGAATCATCATCTGACTCACTaGTCTCGCTTTCTGAGTCACTGCCATTGGCAGCGGTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: QPQLPDGVENHHLTH*SRFLSHCHWQRSLE
Trigger: CTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATGATTCTCCACCCCGTCCGGCAGCTGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS GCA 90 bp GTGGAGAATCATCATCTGACTCACTGGTCTCGCTTTCTGAGTCACTaGCATTGGCAGCGGTCACTGGAGCAGCTGCCCCCACTGAACCAG +
Preference number: 5 (lower is better)
Translates to: VENHHLTHWSRFLSH*HWQRSLEQLPPLNQ
Trigger: CTGGTTCAGTGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATGATTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CCA 90 bp AATCATCATCTGACTCACTGGTCTCGCTTTCTGAGTCACTGCCATTaGCAGCGGTCACTGGAGCAGCTGCCCCCACTGAACCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: NHHLTHWSRFLSHCH*QRSLEQLPPLNQPW
Trigger: CCATGGCTGGTTCAGTGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS TCA 90 bp GCTGCCCCCACTGAACCAGCCATGGCAGAGGAAGTCTTTTTCTCGTaGATGAGCAGTGCTCGCATGACCTCTTCGTTGTCATCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: AAPTEPAMAEEVFFS*MSSARMTSSLSSGP
Trigger: TGGGCCTGATGACAACGAAGAGGTCATGCGAGCACTGCTCATTCACGAGAAAAAGACTTCCTCTGCCATGGCTGGTTCAGTGGGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS TCA 90 bp GCCGTTGGCTCACTTCACTGTAGGAGAACGGACGGCCAGCCACCATaGCAATGGGGTCATCTGCTACTTCTTCAAACTCGTCATCTTCCT +
Preference number: 5 (lower is better)
Translates to: AVGSLHCRRTDGQPP*QWGHLLLLQTRHLP
Trigger: AGGAAGATGACGAGTTTGAAGAAGTAGCAGATGACCCCATTGTCATGGTGGCTGGCCGTCCGTTCTCCTACAGTGAAGTGAGCCAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS TCA 90 bp GGATCACATACTTGGCTAACCGCTTCAATGCTGCTGGAACTTCAGTaGGGACATCTGGGTCTGCCATCTTTAGCAACGAACTCCAACTTT +
Preference number: 5 (lower is better)
Translates to: GSHTWLTASMLLELQ*GHLGLPSLATNSNF
Trigger: AAAGTTGGAGTTCGTTGCTAAAGATGGCAGACCCAGATGTCCTCACTGAAGTTCCAGCAGCATTGAAGCGGTTAGCCAAGTATGTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283875.6
ENST00000484715.1
ENST00000492959.1
ENST00000497393.1
CDS-3UTR CAA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCAGAAAATACAGCACTTaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCRKYST*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAAAGTGCTGTATTTTCT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTCTGAGTCACTGCCATaGGCAGCGGTCACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTSESLP*AAVTGA
Trigger: TGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCTGTTGGCAAGCTGCTTaGGTGGGCAGCAGTATAAGA +
Preference number: 5 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTCWQAA*VGSSIR
Trigger: TCTTATACTGCTGCCCACCAAAGCAGCTTGCCAACA...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGCGCATGACCTCTTCGTaGTCATCAGGCCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: SSIRNCLECLARTDKMDVRMTSS*SSGPAW
Trigger: CCATGCTGGGCCTGATGACAACGAAGAGGTCATGCG...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTTTGAAGGAAGCCCGGTaGGTCGAATCTCTCTCATCG +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTLKEAR*VESLSS
Trigger: CGATGAGAGAGATTCGACCAACCGGGCTTCCTTCAA...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATCTACAGACAGGACATTaGAAGGAAGCCCGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNLQTGH*KEARLV
Trigger: GACCAACCGGGCTTCCTTCAAATGTCCTGTCTGTAG...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp ACAATTTATAGCACTGACAAGAGGTCTGTACCCAAAGGGAACAAAACCAGGACCCTCTACCATCAATCTTaGCACAAGGATGGACAGTTG +
Preference number: 5 (lower is better)
Translates to: TIYSTDKRSVPKGNKTRTLYHQS*HKDGQL
Trigger: CAACTGTCCATCCTTGTGCAAAGATTGATGGTAGAG...GGTCCTGGTTTTGTTCCCTTTGGGTACAGACCTCTTGTCAGTGCTATAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS GCA 90 bp ACGATAATTGATGAAGTAGTAGTTATGGCGAGTGGTTTTCCCGTCTaGAGCAGTCTCTACCCTCATTCTGCATTTGATAAACTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TIIDEVVVMASGFPV*SSLYPHSAFDKLVS
Trigger: GGAGACAAGTTTATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGACGGGAAAACCACTCGCCATAACTACTACTTCATCAATTATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283875.6
ENST00000492959.1
ENST00000497393.1
CDS-3UTR CAA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGTCTCAGCACCCTACCTaGCTGGGAAAGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SSIRNCLECLARTDKMDVSQHPT*LGKFLA
Trigger: TGCCAGAAACTTTCCCAGCAAGGTAGGGTGCTGAGA...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATCCCCCAATCAGTGATTaGACTGTTGGCAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNPPISD*TVGKLL
Trigger: AAGCAGCTTGCCAACAGTCAAATCACTGATTGGGGG...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGTGCTTCCGATCAAACTaGAGCAGCTCCAGCATATCC +
Preference number: 5 (lower is better)
Translates to: SSIRNCLECLARTDKMDVCFRSN*SSSSIS
Trigger: GGATATGCTGGAGCTGCTCAAGTTTGATCGGAAGCA...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTGTGCGTGCATCTTTTTaGGGCATTGCTGATTCATCC +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTVRASF*GIADSS
Trigger: GGATGAATCAGCAATGCCCAAAAAAGATGCACGCAC...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCAAATAGGCCTCTCTTaGGCAGATTTCCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTQIGLS*ADFPSS
Trigger: ACTGGAAGGGAAATCTGCCAAAGAGAGGCCTATTTG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp TCACTCTTCAACCCTTCACAGAGACTTCTTGTCTTACGTCCATGTTTTTCTAATAGAACCATATGCCCCTaGGACAGTGCTTTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: SLFNPSQRLLVLRPCFSNRTICP*DSAFSQ
Trigger: TTGAGAGAAAGCACTGTCCAAGGGGCATATGGTTCT...ATTAGAAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAGGGTTGAAGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCGTCCTCAAACATGCGTaGTCCCATTGCTATATATGC +
Preference number: 5 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCVLKHA*SHCYIC
Trigger: GCATATATAGCAATGGGACAACGCATGTTTGAGGAC...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTCACTGTTACCAATGCTaGTCACTCTTCAACCCTTCA +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTHCYQC*SLFNPS
Trigger: TGAAGGGTTGAAGAGTGACAAGCATTGGTAACAGTG...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCTCGATGAAGATCTTCTaGGTCATCCATGTTAATGAC +
Preference number: 5 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCSMKIF*VIHVND
Trigger: GTCATTAACATGGATGACCAAGAAGATCTTCATCGA...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CTTGCTGGGAAAGTTTCTGGCATAAAAGTCAAACTCTCTACCATCAATCTTTGCACATGCGTTGTCCCATaGCTATATATGCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LAGKVSGIKVKLSTINLCTCVVP*LYMLPF
Trigger: AAAAGGAAGCATATATAGCAATGGGACAACGCATGT...GCAAAGATTGATGGTAGAGAGTTTGACTTTTATGCCAGAAACTTTCCCAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp CAAAACCAGGACCAGTCTCAGCTTTACATAAAGGATTTCCAAATCAGACTAACTACCCTCATTCTGCATTaGATAAACTTGTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QNQDQSQLYIKDFQIRLTTLILH*INLSPF
Trigger: AAAGGGAGACAAGTTTATCAAATGCAGAATGAGGGT...AGTTAGTCTGATTTGGAAATCCTTTATGTAAAGCTGAGACTGGTCCTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS-3UTR CAA 90 bp AGCAGTATAAGAAATTGTTTGGAATGCCTGGCTAGAACAGATAAAATGGATGTGCTTCACAGAGACTTCTaGTCTTACGTCCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: SSIRNCLECLARTDKMDVLHRDF*SYVHVF
Trigger: AAAAACATGGACGTAAGACAAGAAGTCTCTGTGAAG...CACATCCATTTTATCTGTTCTAGCCAGGCATTCCAAACAATTTCTTATACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CCA 72 bp CTGACTCACTGGTCTCGCTTTCTGAGTCACTGCCATTaGCAGCGGTCACTGGAGCAGCTGCCCCCACTGAAC +
Preference number: 6 (lower is better)
Translates to: LTHWSRFLSHCH*QRSLEQLPPLN
Trigger: GTTCAGTGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS GCA 72 bp CATCATCTGACTCACTGGTCTCGCTTTCTGAGTCACTaGCATTGGCAGCGGTCACTGGAGCAGCTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: HHLTHWSRFLSH*HWQRSLEQLPP
Trigger: TGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CCA 72 bp CTGCCGGACGGGGTGGAGAATCATCATCTGACTCACTaGTCTCGCTTTCTGAGTCACTGCCATTGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LPDGVENHHLTH*SRFLSHCHWQR
Trigger: CCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATGATTCTCCACCCCGTCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CAA 72 bp TCTGACTCACTGGTCTCGCTTTCTGAGTCACTGCCATaGGCAGCGGTCACTGGAGCAGCTGCCCCCACTGAA +
Preference number: 6 (lower is better)
Translates to: SDSLVSLSESLP*AAVTGAAAPTE
Trigger: TTCAGTGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CAA 90 bp GAATCATCATCTGACTCACTGGTCTCGCTTTCTGAGTCACTGCCATaGGCAGCGGTCACTGGAGCAGCTGCCCCCACTGAACCAGCCATG +
Preference number: 6 (lower is better)
Translates to: ESSSDSLVSLSESLP*AAVTGAAAPTEPAM
Trigger: CATGGCTGGTTCAGTGGGGGCAGCTGCTCCAGTGACCGCTGCCAATGGCAGTGACTCAGAAAGCGAGACCAGTGAGTCAGATGATGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CCA 72 bp TCTGAGTGTATAAGTCTTCATAGGAAGGACCTTTGGTaGCCCATGCTTCCCGGTGGTGCCCACCTGCTAGGC +
Preference number: 6 (lower is better)
Translates to: SECISLHRKDLW*PMLPGGAHLLG
Trigger: GCCTAGCAGGTGGGCACCACCGGGAAGCATGGGCCACCAAAGGTCCTTCCTATGAAGACTTATACACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000469772.5
CDS CCA 72 bp CATTCTGAGTGTATAAGTCTTCATAGGAAGGACCTTTaGTGGCCCATGCTTCCCGGTGGTGCCCACCTGCTA +
Preference number: 6 (lower is better)
Translates to: HSECISLHRKDL*WPMLPGGAHLL
Trigger: TAGCAGGTGGGCACCACCGGGAAGCATGGGCCACCAAAGGTCCTTCCTATGAAGACTTATACACTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000469772.5
CDS CAA 72 bp AGCGCTTCAACTACCGGCTTAAATGAACCACGCCCCTaGCGCGACAAAGAAAACGCACTATTCCTGCGACCA +
Preference number: 6 (lower is better)
Translates to: SASTTGLNEPRP*RDKENALFLRP
Trigger: TGGTCGCAGGAATAGTGCGTTTTCTTTGTCGCGCAAGGGGCGTGGTTCATTTAAGCCGGTAGTTGAAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484715.1
CDS TCA 72 bp TCACTTCACTGTAGGAGAACGGACGGCCAGCCACCATaGCAATGGGGTCATCTGCTACTTCTTCAAACTCGT +
Preference number: 6 (lower is better)
Translates to: SLHCRRTDGQPP*QWGHLLLLQTR
Trigger: ACGAGTTTGAAGAAGTAGCAGATGACCCCATTGTCATGGTGGCTGGCCGTCCGTTCTCCTACAGTGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS GCA 72 bp ATCAGGCCCAGCATGGCCTTCCTCACGCTCCTGAAATaGGTCCATATCTATGCCCCCTTCTTTCATATCTTC +
Preference number: 6 (lower is better)
Translates to: IRPSMAFLTLLK*VHIYAPFFHIF
Trigger: GAAGATATGAAAGAAGGGGGCATAGATATGGACGCATTTCAGGAGCGTGAGGAAGGCCATGCTGGGCCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS TCA 72 bp ACTTGGCTAACCGCTTCAATGCTGCTGGAACTTCAGTaGGGACATCTGGGTCTGCCATCTTTAGCAACGAAC +
Preference number: 6 (lower is better)
Translates to: TWLTASMLLELQ*GHLGLPSLATN
Trigger: GTTCGTTGCTAAAGATGGCAGACCCAGATGTCCTCACTGAAGTTCCAGCAGCATTGAAGCGGTTAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283875.6
ENST00000484715.1
ENST00000492959.1
ENST00000497393.1
CDS CAA 90 bp TCTGTGAAAGTACTACTACAGACAGGACATTTGAAGGAAGCCCGGTaGGTCGAATCTCTCTCATCGGTCTCAATTCTTCTTCTCATGTGG +
Preference number: 6 (lower is better)
Translates to: SVKVLLQTGHLKEAR*VESLSSVSILLLMW
Trigger: CCACATGAGAAGAAGAATTGAGACCGATGAGAGAGATTCGACCAACCGGGCTTCCTTCAAATGTCCTGTCTGTAGTAGTACTTTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000497393.1
CDS CCA 72 bp TTGGGCATTGCTGATTCATCCTCTTCTACCTCTGTATaGCAAAAAGTACAGCGGAAAGTTCCAAGGCGAATC +
Preference number: 6 (lower is better)
Translates to: LGIADSSSSTSV*QKVQRKVPRRI
Trigger: GATTCGCCTTGGAACTTTCCGCTGTACTTTTTGCCATACAGAGGTAGAAGAGGATGAATCAGCAATGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469772.5
CDS CAA 72 bp GTACTACTACAGACAGGACATTTGAAGGAAGCCCGGTaGGTCGAATCTCTCTCATCGGTCTCAATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VLLQTGHLKEAR*VESLSSVSILL
Trigger: AAGAAGAATTGAGACCGATGAGAGAGATTCGACCAACCGGGCTTCCTTCAAATGTCCTGTCTGTAGTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000497393.1
CDS TCA 72 bp TATTCAAAACTGATCGAAGTTGCTTCCGATCAAACTTaGGCAGCTCCAGCATATCCTCCTCTTTCACACAGG +
Preference number: 6 (lower is better)
Translates to: YSKLIEVASDQT*AAPAYPPLSHR
Trigger: CCTGTGTGAAAGAGGAGGATATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCAGTTTTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283875.6
ENST00000492959.1
ENST00000497393.1
CDS GCA 72 bp GATGAAGTAGTAGTTATGGCGAGTGGTTTTCCCGTCTaGAGCAGTCTCTACCCTCATTCTGCATTTGATAAA +
Preference number: 6 (lower is better)
Translates to: DEVVVMASGFPV*SSLYPHSAFDK
Trigger: TTTATCAAATGCAGAATGAGGGTAGAGACTGCTGCAGACGGGAAAACCACTCGCCATAACTACTACTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283875.6
ENST00000492959.1
ENST00000497393.1
CDS CCA 72 bp TTGGGCATTGCTGATTCATCCTCTTCTACCTCTGTATaGCAAAAAGTACAGCGGAAAGTTCCTGTCATAGGA +
Preference number: 6 (lower is better)
Translates to: LGIADSSSSTSV*QKVQRKVPVIG
Trigger: TCCTATGACAGGAACTTTCCGCTGTACTTTTTGCCATACAGAGGTAGAAGAGGATGAATCAGCAATGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CAA 72 bp CTCTGTCTCCCGAAGCAATGCATAAATGGGCTCAATTaGTTCATTAAACCTTGCCAAAAGTGTGCGTGCATC +
Preference number: 6 (lower is better)
Translates to: LCLPKQCINGLN*FIKPCQKCACI
Trigger: GATGCACGCACACTTTTGGCAAGGTTTAATGAACAAATTGAGCCCATTTATGCATTGCTTCGGGAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000469772.5
CDS CAA 72 bp AGGGAAAGCTCACTCAAAGAGGTCCTCAAACATGCGTaGTCCCATTGCTATATATGCTTCCTTTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RESSLKEVLKHA*SHCYICFLFFW
Trigger: CCAGAAGAAAAGGAAGCATATATAGCAATGGGACAACGCATGTTTGAGGACCTCTTTGAGTGAGCTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CAA 90 bp CCCTTTAAATTATTCAAAACTGATCGAAGTTGCTTCCGATCAAACTaGAGCAGCTCCAGCATATCCTCCTCTTTCACACAGGAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: PFKLFKTDRSCFRSN*SSSSISSSFTQEFL
Trigger: CAGGAACTCCTGTGTGAAAGAGGAGGATATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCAGTTTTGAATAATTTAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283875.6
ENST00000492959.1
ENST00000497393.1
CDS CAA 72 bp TTATTCAAAACTGATCGAAGTTGCTTCCGATCAAACTaGAGCAGCTCCAGCATATCCTCCTCTTTCACACAG +
Preference number: 6 (lower is better)
Translates to: LFKTDRSCFRSN*SSSSISSSFTQ
Trigger: CTGTGTGAAAGAGGAGGATATGCTGGAGCTGCTCAAGTTTGATCGGAAGCAACTTCGATCAGTTTTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283875.6
ENST00000492959.1
ENST00000497393.1
CDS CAA 90 bp GAAAGAATTAGGGAAAGCTCACTCAAAGAGGTCCTCAAACATGCGTaGTCCCATTGCTATATATGCTTCCTTTTCTTCTGGTGTCATCTG +
Preference number: 6 (lower is better)
Translates to: ERIRESSLKEVLKHA*SHCYICFLFFWCHL
Trigger: CAGATGACACCAGAAGAAAAGGAAGCATATATAGCAATGGGACAACGCATGTTTGAGGACCTCTTTGAGTGAGCTTTCCCTAATTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283875.6
CDS CAA 72 bp TCATTAAACCTTGCCAAAAGTGTGCGTGCATCTTTTTaGGGCATTGCTGATTCATCCTCTTCTACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SLNLAKSVRASF*GIADSSSSTSV
Trigger: TACAGAGGTAGAAGAGGATGAATCAGCAATGCCCAAAAAAGATGCACGCACACTTTTGGCAAGGTTTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000469772.5
CDS CAA 90 bp TCAATTTGTTCATTAAACCTTGCCAAAAGTGTGCGTGCATCTTTTTaGGGCATTGCTGATTCATCCTCTTCTACCTCTGTATGGCAAAAA +
Preference number: 6 (lower is better)
Translates to: SICSLNLAKSVRASF*GIADSSSSTSVWQK
Trigger: TTTTTGCCATACAGAGGTAGAAGAGGATGAATCAGCAATGCCCAAAAAAGATGCACGCACACTTTTGGCAAGGTTTAATGAACAAATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283875.6
ENST00000469772.5