Pregenerated sensors for GTF2A2 (Homo sapiens)
Ensembl gene IDs: ENSG00000140307Ensembl transcript IDs: ENST00000396060.7, ENST00000396061.5, ENST00000396063.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACTGCAGGAGCATCGAGGTAACAGCAAAAATCTTTTACTCCAATTaGGTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: NCRSIEVTAKIFYSN*VNPVNHVRNSSPRV Trigger: GACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGATGCTCCTGCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTACTTTGGTTTTGCCCCTGCTaGTGCTTTCATCAGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: VNPVNHVRNSSPRVSMLLWFCPC*CFHQVK Trigger: CTTTACCTGATGAAAGCATCAGCAGGGGCAAAACCA...AAGTAACATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR CCA 90 bp | ATCGAGGTAACAGCAAAAATCTTTTACTCCAATTGGGTCAATCCAGTTAACCATAAGACACCTGTCATGTaGGGGGACTATTTTGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: IEVTAKIFYSNWVNPVNHKTPVM*GDYFVW Trigger: CCAAACAAAATAGTCCCCCCACATGACAGGTGTCTT...ATGGTTAACTGGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR CCA 90 bp | ATCGAGGTAACAGCAAAAATCTTTTACTCCAATTGGGTCAATCCAGTTAACCATCTTCCTCATGTTACCTaGTCTAAGAAGGAAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: IEVTAKIFYSNWVNPVNHLPHVT*SKKESF Trigger: AAAACTTTCCTTCTTAGACCAGGTAACATGAGGAAG...ATGGTTAACTGGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR CAA 90 bp | TACCTAGCCAAAGTTAGTTTTAATGTGAGAGTCAAGGACTACAGTGGCATGCTGATCCAGAGTTTGGTTTaGCCCCTGCTGATGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: YLAKVSFNVRVKDYSGMLIQSLV*PLLMLS Trigger: TGAAAGCATCAGCAGGGGCAAAACCAAACTCTGGAT...CAGCATGCCACTGTAGTCCTTGACTCTCACATTAAAACTAACTTTGGCTAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR CAA 90 bp | CCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATAATTCCATCCAGAGTTaGGTTTTGCCCCTGCTGATG | + |
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Preference number: 3 (lower is better) Translates to: PVNHVRNSSPRVSMLLLYNSIQS*VLPLLM Trigger: CATCAGCAGGGGCAAAACCAAACTCTGGATGGAATT...ATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR-3UTR CAA 90 bp | ATCGAGGTAACAGCAAAAATCTTTTACTCCAATTGGGTCAATCCAGTTAACCATAGGGCATCATGTTCCTaGCAAAGGAAATGGGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: IEVTAKIFYSNWVNPVNHRASCS*QRKWEN Trigger: ATTTTCCCATTTCCTTTGCAAGGAACATGATGCCCT...ATGGTTAACTGGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| 3UTR CCA 72 bp | AGCATCGAGGTAACAGCAAAAATCTTTTACTCCAATTaGGTCAATCCAGTTAACCATGTAAGAAACTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SIEVTAKIFYSN*VNPVNHVRNSS Trigger: TGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTGCATTGATGTCCTGTaGGGAAGGCGCTTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NWVNPVNHVRNSSPRVSMCIDVL*GRRFPP Trigger: CGGAGGGAAGCGCCTTCCCCACAGGACATCAATGCA...CATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR TCA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCACTACAGTGGCATGCTaGGGTAACAACTGCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ETPHLGSVCYFCISASTITTVAC*GNNCRS Trigger: GCTCCTGCAGTTGTTACCTCAGCATGCCACTGTAGT...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR TCA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCTATTCAAGCTTGCATTaGTGTCCTGTGGGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ETPHLGSVCYFCISASTIYSSLH*CPVGKA Trigger: CGCCTTCCCCACAGGACATCAATGCAAGCTTGAATA...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CCA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCAGGGACAGTCTATATTaGCCAGGCTGGTCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: ETPHLGSVCYFCISASTIRDSLY*PGWSPT Trigger: AGTTGGAGACCAGCCTGGCCAATATAGACTGTCCCT...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CCA 90 bp | CTGCAGGAGCATCGAGGTAACAGCAAAAATCTTTTACTCCAATTGGGTCAATCCAGTCAAGGACTACAGTaGCATGCTGAGGTAACAACT | + |
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Preference number: 4 (lower is better) Translates to: LQEHRGNSKNLLLQLGQSSQGLQ*HAEVTT Trigger: AGTTGTTACCTCAGCATGCCACTGTAGTCCTTGACT...GGATTGACCCAATTGGAGTAAAAGATTTTTGCTGTTACCTCGATGCTCCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR TCA 90 bp | CCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTGGTTTTGCCCCTGCTaGTGCTTTCATCAGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVNHVRNSSPRVSMLLLYWFCPC*CFHQVK Trigger: CTTTACCTGATGAAAGCATCAGCAGGGGCAAAACCA...ATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR TCA 90 bp | CCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATATCAATATGGCAAGCTaGAGACACCTGTCATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PVNHVRNSSPRVSMLLLYINMAS*RHLSCG Trigger: CCCACATGACAGGTGTCTTCAGCTTGCCATATTGAT...ATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGAAGACACCTGTCATGTaGGGGGACTATTTTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: NWVNPVNHVRNSSPRVSMKTPVM*GDYFVW Trigger: CCAAACAAAATAGTCCCCCCACATGACAGGTGTCTT...CATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR TCA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCAAGTTAGTTTTAATGTaGGAGTCAAGGACTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: ETPHLGSVCYFCISASTIKLVLM*ESRTTV Trigger: CACTGTAGTCCTTGACTCTCACATTAAAACTAACTT...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGATCTTTTACTCCAATTaGGTCAATCCAGTTAACCAT | + |
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Preference number: 4 (lower is better) Translates to: NWVNPVNHVRNSSPRVSMIFYSN*VNPVNH Trigger: ATGGTTAACTGGATTGACCCAATTGGAGTAAAAGAT...CATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS GCA 90 bp | TCACCGCCGCCTCGCCGCCCTTCTCCGGTGCCGGCCGCGGGGCCTTaGCGGCAACGGTCGGTAACGGGCAGATCCCAGGAGCGAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SPPPRRPSPVPAAGP*RQRSVTGRSQERRA Trigger: GGCCCTTCGCTCCTGGGATCTGCCCGTTACCGACCGTTGCCGGCAAGGCCCCGCGGCCGGCACCGGAGAAGGGCGGCGAGGCGGCGGTGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS-3UTR CAA 90 bp | AATTGGGTCAATCCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTATTCAAGCTTGCATaGATGTCCTGTGGGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: NWVNPVNHVRNSSPRVSMLFKLA*MSCGEG Trigger: GCCTTCCCCACAGGACATCAATGCAAGCTTGAATAA...CATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGGATTGACCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CAA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCATCCAGAGTTTGGTTTaGCCCCTGCTGATGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: ETPHLGSVCYFCISASTIIQSLV*PLLMLS Trigger: TGAAAGCATCAGCAGGGGCAAAACCAAACTCTGGAT...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CAA 90 bp | GAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATTTCTGCAAGCACAATCAATTCCATCCAGAGTTaGGTTTTGCCCCTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: ETPHLGSVCYFCISASTINSIQS*VLPLLM Trigger: CATCAGCAGGGGCAAAACCAAACTCTGGATGGAATT...GATTGTGCTTGCAGAAATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS-3UTR CAA 90 bp | CCAGTTAACCATGTAAGAAACTCCTCACCTAGGGTCAGTATGTTACTTCTGTATAGGGCATCATGTTCCTaGCAAAGGAAATGGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: PVNHVRNSSPRVSMLLLYRASCS*QRKWEN Trigger: ATTTTCCCATTTCCTTTGCAAGGAACATGATGCCCT...ATACAGAAGTAACATACTGACCCTAGGTGAGGAGTTTCTTACATGGTTAACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396060.7 |
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| CDS GCA 72 bp | CCTCGCCGCCCTTCTCCGGTGCCGGCCGCGGGGCCTTaGCGGCAACGGTCGGTAACGGGCAGATCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PRRPSPVPAAGP*RQRSVTGRSQE Trigger: CTCCTGGGATCTGCCCGTTACCGACCGTTGCCGGCAAGGCCCCGCGGCCGGCACCGGAGAAGGGCGGCGAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS CAA 72 bp | GCCTCGCCGCCCTTCTCCGGTGCCGGCCGCGGGGCCTaGCCGGCAACGGTCGGTAACGGGCAGATCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ASPPFSGAGRGA*PATVGNGQIPG Trigger: TCCTGGGATCTGCCCGTTACCGACCGTTGCCGGCAAGGCCCCGCGGCCGGCACCGGAGAAGGGCGGCGAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS CAA 90 bp | ATCACCGCCGCCTCGCCGCCCTTCTCCGGTGCCGGCCGCGGGGCCTaGCCGGCAACGGTCGGTAACGGGCAGATCCCAGGAGCGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ITAASPPFSGAGRGA*PATVGNGQIPGAKG Trigger: GCCCTTCGCTCCTGGGATCTGCCCGTTACCGACCGTTGCCGGCAAGGCCCCGCGGCCGGCACCGGAGAAGGGCGGCGAGGCGGCGGTGAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS CCA 72 bp | GGTGGTGGGCTGAAGACCTCCCCTAGGTGGGTTCTGTaGGCGCCCCGTGAACGACGAGCCTCCCGCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGLKTSPRWVL*APRERRASRHG Trigger: CCCGTGGCGGGAGGCTCGTCGTTCACGGGGCGCCCACAGAACCCACCTAGGGGAGGTCTTCAGCCCACCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS TCA 72 bp | TGCATTGATGTCCTGGCTGAAAATACGGTGGTGGGCTaGAGACCTCCCCTAGGTGGGTTCTGTGGGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CIDVLAENTVVG*RPPLGGFCGRP Trigger: GGGGCGCCCACAGAACCCACCTAGGGGAGGTCTTCAGCCCACCACCGTATTTTCAGCCAGGACATCAATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396061.5 |
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| CDS CCA 72 bp | ATTCGTTCCTTTTGTCGGAGTTCGCACGAAGAAAGTTaGAAGGCAGACTTCAAACAACAAGCTGTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IRSFCRSSHEES*KADFKQQAVGK Trigger: CTTCCCCACAGCTTGTTGTTTGAAGTCTGCCTTCCAACTTTCTTCGTGCGAACTCCGACAAAAGGAACGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396063.5 |
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| CDS CAA 72 bp | AATTCGTTCCTTTTGTCGGAGTTCGCACGAAGAAAGTaGGAAGGCAGACTTCAAACAACAAGCTGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: NSFLLSEFARRK*EGRLQTTSCGE Trigger: TTCCCCACAGCTTGTTGTTTGAAGTCTGCCTTCCAACTTTCTTCGTGCGAACTCCGACAAAAGGAACGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396063.5 |
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| CDS CAA 90 bp | TTAGATGTGGTATCAGCCACAGAAATTTATTGTTCCCTTCTTGTTTaGCAGTTCAGAAAATTAGAAGTCAAATTCGGAAGTAACTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LDVVSATEIYCSLLV*QFRKLEVKFGSNSS Trigger: GGACGAGTTACTTCCGAATTTGACTTCTAATTTTCTGAACTGCAAAACAAGAAGGGAACAATAAATTTCTGTGGCTGATACCACATCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396063.5 |
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