Pregenerated sensors for GTF2A1L (Homo sapiens)
Ensembl gene IDs: ENSG00000242441Ensembl transcript IDs: ENST00000403751.8, ENST00000423675.5, ENST00000430487.6, ENST00000437125.5, ENST00000448460.5, ENST00000468326.1, ENST00000508440.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGGTGACCAGATACAGTCTGTAGTGTCACACCTGCTGGTACATGAATGGGATGTTTGCACTGGAGTTTaGAGTGCCCAGTTCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: KGDQIQSVVSHLLVHEWDVCTGV*SAQFCC Trigger: ACAGCAGAACTGGGCACTTCAAACTCCAGTGCAAAC...ATCCCATTCATGTACCAGCAGGTGTGACACTACAGACTGTATCTGGTCACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| 3UTR CAA 90 bp | TTTGTATTACTGAAGGCTGGCCAAGCTGTTGAAATACTTGCTGAATaGGATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: FVLLKAGQAVEILAE*DAEEYLLFQKSLSP Trigger: TGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCATCCAATTCAGCAAGTATTTCAACAGCTTGGCCAGCCTTCAGTAATACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| 3UTR TCA 72 bp | CCATGGATTCAATTGTGGAACACTAGTTTGTATTACTaGAGGCTGGCCAAGCTGTTGAAATACTTGCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: PWIQLWNTSLYY*RLAKLLKYLLN Trigger: ATTCAGCAAGTATTTCAACAGCTTGGCCAGCCTTCAGTAATACAAACTAGTGTTCCACAATTGAATCCATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| 3UTR CCA 72 bp | AATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTaGTACATTGACTTTATAAAGGTGACCAGATACAGT | + |
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Preference number: 3 (lower is better) Translates to: NTCSSRSLCHHN*YIDFIKVTRYS Trigger: ACTGTATCTGGTCACCTTTATAAAGTCAATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| 3UTR CCA 72 bp | TGGCTGTCAGTTTTATTGATGCTGCAAGGGGTACAGTaGAATACAGCTTTCTCTTCTGTAAATTTATTGGTT | + |
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Preference number: 3 (lower is better) Translates to: WLSVLLMLQGVQ*NTAFSSVNLLV Trigger: AACCAATAAATTTACAGAAGAGAAAGCTGTATTCCACTGTACCCCTTGCAGCATCAATAAAACTGACAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR TCA 90 bp | GCACTGGAGTTTGAAGTGCCCAGTTCTGCTGTGGTAAAACTTGGAAGAGTTCTAGTTTGCACTGGAGTTTaGAGTGCCCAGTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALEFEVPSSAVVKLGRVLVCTGV*SAQFCC Trigger: ACAGCAGAACTGGGCACTTCAAACTCCAGTGCAAAC...TAGAACTCTTCCAAGTTTTACCACAGCAGAACTGGGCACTTCAAACTCCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CCA 90 bp | GAAGTGCCCAGTTCTGCTGTGGTAAAACTTGGAAGAGTTCTACCAGCAGGAATAGACGATTGCAATGTTTaGTGCAAGCTGTGCGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: EVPSSAVVKLGRVLPAGIDDCNV*CKLCGN Trigger: GTTGCCGCACAGCTTGCACCAAACATTGCAATCGTC...TATTCCTGCTGGTAGAACTCTTCCAAGTTTTACCACAGCAGAACTGGGCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR TCA 90 bp | ATATGCCATCACAAGAAGATTTCTTCCCACACTGTCCCTGTTCTTCTCGGATCCGGCTGTCAGTTTTATTaGTGCTGCAAGGGGTACAGT | + |
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Preference number: 4 (lower is better) Translates to: ICHHKKISSHTVPVLLGSGCQFY*CCKGYS Trigger: ACTGTACCCCTTGCAGCATCAATAAAACTGACAGCC...GGATCCGAGAAGAACAGGGACAGTGTGGGAAGAAATCTTCTTGTGATGGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR GCA 90 bp | CTTGCTGAATTGGATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCACAACCTGTTGACGATTaGAATGTTTGGTGCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LAELDAEEYLLFQKSLSPQPVDD*NVWCKL Trigger: CAGCTTGCACCAAACATTGCAATCGTCAACAGGTTG...TGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCATCCAATTCAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| 3UTR CAA 72 bp | CTGAAGGCTGGCCAAGCTGTTGAAATACTTGCTGAATaGGATGCTGAAGAATACCTGCTCTTCCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LKAGQAVEILAE*DAEEYLLFQKS Trigger: AGACTTCTGGAAGAGCAGGTATTCTTCAGCATCCAATTCAGCAAGTATTTCAACAGCTTGGCCAGCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR GCA 90 bp | AAAGGTGACCAGATACAGTCTGTAGTGTCACACCTGCTGGTACATGAATGGGATATGCTGAAGAATACCTaGTCTTCCAGAAGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KGDQIQSVVSHLLVHEWDMLKNT*SSRSLC Trigger: ACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT...ATCCCATTCATGTACCAGCAGGTGTGACACTACAGACTGTATCTGGTCACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR TCA 90 bp | TGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTGACTTTATAAAGGTGAAGCTGTGCGGCAACTaGAGAGTAAACAGAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSRSLCHHNWYIDFIKVKLCGN*RVNRGD Trigger: ATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTT...CACCTTTATAAAGTCAATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR TCA 90 bp | ATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTACTAGTTTGTATTACTaGAGGCTGGCCAAGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MLKNTCSSRSLCHHNWYITSLYY*RLAKLL Trigger: CAACAGCTTGGCCAGCCTTCAGTAATACAAACTAGT...AATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR TCA 90 bp | ATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTTGGTATCCAACCTGTTaGCGATTGCAATGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MLKNTCSSRSLCHHNWYIWYPTC*RLQCLV Trigger: CACCAAACATTGCAATCGTCAACAGGTTGGATACCA...AATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR GCA 90 bp | GAAGTGCCCAGTTCTGCTGTGGTAAAACTTGGAAGAGTTCTACCAGCAGGAATAGAAGAAGTCTTCTGTTaGTTTAGACTGCAAAACCTT | + |
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Preference number: 4 (lower is better) Translates to: EVPSSAVVKLGRVLPAGIEEVFC*FRLQNL Trigger: AAGGTTTTGCAGTCTAAAGCAACAGAAGACTTCTTC...TATTCCTGCTGGTAGAACTCTTCCAAGTTTTACCACAGCAGAACTGGGCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCAATAAAACTGTGTTTTTAATCAGGAAGCCAAGCGAACATGATTCCCTGCAAGGGGTACAGTaGAATACAGCTTTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AESNKTVFLIRKPSEHDSLQGVQ*NTAFSS Trigger: AGAAGAGAAAGCTGTATTCCACTGTACCCCTTGCAG...GGAATCATGTTCGCTTGGCTTCCTGATTAAAAACACAGTTTTATTGCTCTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGCAATAAAACTGTGTTTTTAATCAGGAAGCCAAGCGAACATGATTCCGAAGCCAAGCGAACATaGTTCCAGAAGAAATATAGG | + |
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Preference number: 4 (lower is better) Translates to: AESNKTVFLIRKPSEHDSEAKRT*FQKKYR Trigger: CCTATATTTCTTCTGGAATCATGTTCGCTTGGCTTC...GGAATCATGTTCGCTTGGCTTCCTGATTAAAAACACAGTTTTATTGCTCTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CCA 90 bp | CTTGCTGAATTGGATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCACCATGGATTCAATTGTaGAACACTAGTTTGTATTAC | + |
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Preference number: 4 (lower is better) Translates to: LAELDAEEYLLFQKSLSPPWIQL*NTSLYY Trigger: GTAATACAAACTAGTGTTCCACAATTGAATCCATGG...TGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCATCCAATTCAGCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CCA 90 bp | AAGCAAATATGCCATCACAAGAAGATTTCTTCCCACACTGTCCCTGTTCTTCTCAAACGATGTCCTTCTTaGGAATGCCTTATCATACTG | + |
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Preference number: 4 (lower is better) Translates to: KQICHHKKISSHTVPVLLKRCPS*ECLIIL Trigger: CAGTATGATAAGGCATTCCCAAGAAGGACATCGTTT...GAGAAGAACAGGGACAGTGTGGGAAGAAATCTTCTTGTGATGGCATATTTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR TCA 90 bp | ATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTAAGAGTAAACAGAGGTaGTTGGATGCTATTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: MLKNTCSSRSLCHHNWYIKSKQR*LDAISE Trigger: TTCAGAAATAGCATCCAATCACCTCTGTTTACTCTT...AATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CCA 90 bp | TGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTGACTTTATAAAGGTGGTAAACAGAGGTGATTaGATGCTATTTCTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CSSRSLCHHNWYIDFIKVVNRGD*MLFLKK Trigger: CTTCTTCAGAAATAGCATCCAATCACCTCTGTTTAC...CACCTTTATAAAGTCAATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CCA 90 bp | GAATACAGCTTTCTCTTCTGTAAATTTATTGGTTTGGCAGTGCAGAGAGCAATATATCACTACTGTTTGTaGCTGAATCCTCATTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: EYSFLFCKFIGLAVQRAIYHYCL*LNPHLK Trigger: TTTCAAATGAGGATTCAGCCACAAACAGTAGTGATA...TATTGCTCTCTGCACTGCCAAACCAATAAATTTACAGAAGAGAAAGCTGTATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CAA 90 bp | CTTGCTGAATTGGATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATCCCAGAGCACCGGGTaGAGGCAGGCCATGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: LAELDAEEYLLFQKSLSPSQSTG*RQAMTA Trigger: TGCTGTCATGGCCTGCCTCAACCCGGTGCTCTGGGA...TGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCATCCAATTCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS GCA 90 bp | GGTGATTGGATGCTATTTCTGAAGAAGTCTTCTGTTGCTTTAGACTaGAAAACCTTGGTTTCCCAGAGCACCGGGTTGAGGCAGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: GDWMLFLKKSSVALD*KTLVSQSTGLRQAM Trigger: CATGGCCTGCCTCAACCCGGTGCTCTGGGAAACCAAGGTTTTGCAGTCTAAAGCAACAGAAGACTTCTTCAGAAATAGCATCCAATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423675.5 ENST00000430487.6 ENST00000448460.5 |
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| CDS TCA 90 bp | GATGCTGTTGACGATTGCAATGTTTGGTGCAAGCTGTGCGGCAACTaGAGAGTAAACAGAGGTGATTGGATGCTATTTCTGAAGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: DAVDDCNVWCKLCGN*RVNRGDWMLFLKKS Trigger: AGACTTCTTCAGAAATAGCATCCAATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTTGCACCAAACATTGCAATCGTCAACAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000448460.5 ENST00000468326.1 |
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| CDS TCA 90 bp | CAACCTGTTGACGATTGCAATGTTTGGTGCAAGCTGTGCGGCAACTaGAGAGTAAACAGAGGTGATTGGATGCTATTTCTGAAGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: QPVDDCNVWCKLCGN*RVNRGDWMLFLKKS Trigger: AGACTTCTTCAGAAATAGCATCCAATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTTGCACCAAACATTGCAATCGTCAACAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423675.5 ENST00000437125.5 |
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| CDS-3UTR CAA 90 bp | TGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTGACTTTATAAAGGTGTTAGACTGCAAAACCTaGGTTTCCCAGAGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: CSSRSLCHHNWYIDFIKVLDCKT*VSQSTG Trigger: CCCGGTGCTCTGGGAAACCAAGGTTTTGCAGTCTAA...CACCTTTATAAAGTCAATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CAA 90 bp | GCACTGGAGTTTGAAGTGCCCAGTTCTGCTGTGGTAAAACTTGGAAGAGTTCTAATGGTATCCAACCTGTaGACGATTGCAATGTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: ALEFEVPSSAVVKLGRVLMVSNL*TIAMFG Trigger: ACCAAACATTGCAATCGTCAACAGGTTGGATACCAT...TAGAACTCTTCCAAGTTTTACCACAGCAGAACTGGGCACTTCAAACTCCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS TCA 90 bp | CAATGTTTGGTGCAAGCTGTGCGGCAACTGAAGAGTAAACAGAGGTaGTTGGATGCTATTTCTGAAGAAGTCTTCTGTTGCTTTAGACTG | + |
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Preference number: 5 (lower is better) Translates to: QCLVQAVRQLKSKQR*LDAISEEVFCCFRL Trigger: CAGTCTAAAGCAACAGAAGACTTCTTCAGAAATAGCATCCAATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTTGCACCAAACATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000403751.8 ENST00000423675.5 ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 ENST00000468326.1 |
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| CDS GCA 90 bp | TCTAAGTGTTTCCTATCTACTGGCCCAGAAGGTAGAATTGCGGGTTaGTGTAGCACGGTTTCAATTCTCTGTGATTTTTCAGTAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SKCFLSTGPEGRIAG*CSTVSILCDFSVVA Trigger: AGCAACTACTGAAAAATCACAGAGAATTGAAACCGTGCTACAGCAACCCGCAATTCTACCTTCTGGGCCAGTAGATAGGAAACACTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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| CDS-3UTR CAA 90 bp | TGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTGACTTTATAAAGGTGAGTTTGCACTGGAGTTaGAAGTGCCCAGTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CSSRSLCHHNWYIDFIKVSLHWS*KCPVLL Trigger: CAGCAGAACTGGGCACTTCAAACTCCAGTGCAAACT...CACCTTTATAAAGTCAATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CAA 90 bp | CATCACAAGAAGATTTCTTCCCACACTGTCCCTGTTCTTCTCGGATCCTTTGTTTCTTCTGTAAATTTATaGGTTTGGCAGTGCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: HHKKISSHTVPVLLGSFVSSVNL*VWQCRE Trigger: CTCTCTGCACTGCCAAACCAATAAATTTACAGAAGA...AACAAAGGATCCGAGAAGAACAGGGACAGTGTGGGAAGAAATCTTCTTGTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS TCA 90 bp | TTGAAGAGACCATGGATTCAATTGTGGAACACTAGTTTGTATTACTaGAGGCTGGCCAAGCTGTTGAAATACTTGCTGAATTGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: LKRPWIQLWNTSLYY*RLAKLLKYLLNWML Trigger: CAGCATCCAATTCAGCAAGTATTTCAACAGCTTGGCCAGCCTTCAGTAATACAAACTAGTGTTCCACAATTGAATCCATGGTCTCTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 |
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| CDS-3UTR CAA 90 bp | CATCACAAGAAGATTTCTTCCCACACTGTCCCTGTTCTTCTCGGATCCTTTGTTTTCTTCTCGGATCCTTaGTTAAATGAGTTTAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: HHKKISSHTVPVLLGSFVFFSDP*LNEFRC Trigger: ACACCTAAACTCATTTAACAAAGGATCCGAGAAGAA...AACAAAGGATCCGAGAAGAACAGGGACAGTGTGGGAAGAAATCTTCTTGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CAA 90 bp | ATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTGAAATACTTGCTGAATaGGATGCTGAAGAATACCTG | + |
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Preference number: 5 (lower is better) Translates to: MLKNTCSSRSLCHHNWYIEILAE*DAEEYL Trigger: CAGGTATTCTTCAGCATCCAATTCAGCAAGTATTTC...AATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CAA 90 bp | ATGCTGAAGAATACCTGCTCTTCCAGAAGTCTCTGTCACCATAATTGGTACATTAAGCTGTTGAAATACTaGCTGAATTGGATGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLKNTCSSRSLCHHNWYIKLLKY*LNWMLK Trigger: CTTCAGCATCCAATTCAGCAAGTATTTCAACAGCTT...AATGTACCAATTATGGTGACAGAGACTTCTGGAAGAGCAGGTATTCTTCAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS-3UTR CAA 90 bp | ATCACAAGAAGATTTCTTCCCACACTGTCCCTGTTCTTCTCGGATCCTTTGTTATCTCATCTGCATCTCTaGTACTTCCTATTTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: ITRRFLPTLSLFFSDPLLSHLHL*YFLFLH Trigger: ATGAAGAAATAGGAAGTACAAGAGATGCAGATGAGA...TAACAAAGGATCCGAGAAGAACAGGGACAGTGTGGGAAGAAATCTTCTTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CAA 90 bp | TGGAATACAGCTTTCTCTTCTGTAAATTTATTGGTTTGGCAGTGCAGAGAGCAATGGCTGAATCCTCATTaGAAATACTGTCAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: WNTAFSSVNLLVWQCREQWLNPH*KYCQLL Trigger: AAGAAGCTGACAGTATTTCAAATGAGGATTCAGCCA...TTGCTCTCTGCACTGCCAAACCAATAAATTTACAGAAGAGAAAGCTGTATTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CAA 90 bp | GAATACAGCTTTCTCTTCTGTAAATTTATTGGTTTGGCAGTGCAGAGAGCAATACATTATCACTACTGTTaGTGGCTGAATCCTCATTTG | + |
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Preference number: 5 (lower is better) Translates to: EYSFLFCKFIGLAVQRAIHYHYC*WLNPHL Trigger: CAAATGAGGATTCAGCCACAAACAGTAGTGATAATG...TATTGCTCTCTGCACTGCCAAACCAATAAATTTACAGAAGAGAAAGCTGTATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS-3UTR CAA 90 bp | GAATACAGCTTTCTCTTCTGTAAATTTATTGGTTTGGCAGTGCAGAGAGCAATATGTAAATTTATTGGTTaGGCAGTGCAGAGAGCAATA | + |
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Preference number: 5 (lower is better) Translates to: EYSFLFCKFIGLAVQRAICKFIG*AVQRAI Trigger: TATTGCTCTCTGCACTGCCAAACCAATAAATTTACA...TATTGCTCTCTGCACTGCCAAACCAATAAATTTACAGAAGAGAAAGCTGTATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508440.1 |
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| CDS CCA 72 bp | CGGGTTGAGGCAGGCCATGACAGCACCTCCAGCACCTaGCCCTTTGCGCCTGCGCGGCACGCAGTGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RVEAGHDSTSST*PFAPARHAVPS Trigger: CGAGGGCACTGCGTGCCGCGCAGGCGCAAAGGGCCAGGTGCTGGAGGTGCTGTCATGGCCTGCCTCAACCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 |
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| CDS CAA 90 bp | ACCGGGTTGAGGCAGGCCATGACAGCACCTCCAGCACCTGGCCCTTaGCGCCTGCGCGGCACGCAGTGCCCTCGGAGGGAAACACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TGLRQAMTAPPAPGP*RLRGTQCPRRETLG Trigger: GCCCAGTGTTTCCCTCCGAGGGCACTGCGTGCCGCGCAGGCGCAAAGGGCCAGGTGCTGGAGGTGCTGTCATGGCCTGCCTCAACCCGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 |
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| CDS CCA 72 bp | TTTTGGCGGGGCTGGCCCAACTTCCTGCTGAACTACTaGCCCTCAGCAGCTTCCTCCAACACAGACGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FWRGWPNFLLNY*PSAASSNTDVK Trigger: CTTCACGTCTGTGTTGGAGGAAGCTGCTGAGGGCCAGTAGTTCAGCAGGAAGTTGGGCCAGCCCCGCCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468326.1 |
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| CDS CCA 72 bp | CAGTCACGTGCTGGTGGAGAGCCCCATGAGGGCTTGTaGAGAGGGACTCATCATGCAGATTTTGAGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: QSRAGGEPHEGL*RGTHHADFEPC Trigger: GCATGGCTCAAAATCTGCATGATGAGTCCCTCTCCACAAGCCCTCATGGGGCTCTCCACCAGCACGTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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| CDS TCA 72 bp | GTGCAAGCTGTGCGGCAACTGAAGAGTAAACAGAGGTaGTTGGATGCTATTTCTGAAGAAGTCTTCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VQAVRQLKSKQR*LDAISEEVFCC Trigger: GCAACAGAAGACTTCTTCAGAAATAGCATCCAATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000403751.8 ENST00000423675.5 ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 ENST00000468326.1 |
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| CDS TCA 72 bp | GACGATTGCAATGTTTGGTGCAAGCTGTGCGGCAACTaGAGAGTAAACAGAGGTGATTGGATGCTATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DDCNVWCKLCGN*RVNRGDWMLFL Trigger: CAGAAATAGCATCCAATCACCTCTGTTTACTCTTCAGTTGCCGCACAGCTTGCACCAAACATTGCAATCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000403751.8 ENST00000423675.5 ENST00000430487.6 ENST00000437125.5 ENST00000448460.5 ENST00000468326.1 |
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| CDS GCA 72 bp | TTCCTATCTACTGGCCCAGAAGGTAGAATTGCGGGTTaGTGTAGCACGGTTTCAATTCTCTGTGATTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLSTGPEGRIAG*CSTVSILCDFS Trigger: TGAAAAATCACAGAGAATTGAAACCGTGCTACAGCAACCCGCAATTCTACCTTCTGGGCCAGTAGATAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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| CDS CAA 72 bp | GCAGGAATAACTAATGATGTAATGGTATCCAACCTGTaGACGATTGCAATGTTTGGTGCAAGCTGTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: AGITNDVMVSNL*TIAMFGASCAA Trigger: TGCCGCACAGCTTGCACCAAACATTGCAATCGTCAACAGGTTGGATACCATTACATCATTAGTTATTCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423675.5 |
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| CDS CAA 90 bp | TGGCATTTTCTAAGTGTTTCCTATCTACTGGCCCAGAAGGTAGAATaGCGGGTTGCTGTAGCACGGTTTCAATTCTCTGTGATTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WHFLSVSYLLAQKVE*RVAVARFQFSVIFQ Trigger: CTGAAAAATCACAGAGAATTGAAACCGTGCTACAGCAACCCGCAATTCTACCTTCTGGGCCAGTAGATAGGAAACACTTAGAAAATGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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| CDS CAA 90 bp | CTTGAGGGTCTTCATTATCACTACTGTTTGTGGCTGAATCCTCATTaGAAATACTGTCAGCTTCTTCTTCAGGTACCTTCAGATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LEGLHYHYCLWLNPH*KYCQLLLQVPSDLP Trigger: GGGGAGATCTGAAGGTACCTGAAGAAGAAGCTGACAGTATTTCAAATGAGGATTCAGCCACAAACAGTAGTGATAATGAAGACCCTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000508440.1 |
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| CDS TCA 72 bp | GAGAGACCTGTGGAGAAAATACAACACCTGGAAGACTaGTATAGTGAGAACTTTCCTGATGACACAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: ERPVEKIQHLED*YSENFPDDTTK Trigger: CTTTGTTGTGTCATCAGGAAAGTTCTCACTATATCAGTCTTCCAGGTGTTGTATTTTCTCCACAGGTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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| CDS GCA 72 bp | ATGCTATTTCTGAAGAAGTCTTCTGTTGCTTTAGACTaGAAAACCTTGGTTTCCCAGAGCTGCTTCAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: MLFLKKSSVALD*KTLVSQSCFKS Trigger: AGACTTGAAGCAGCTCTGGGAAACCAAGGTTTTGCAGTCTAAAGCAACAGAAGACTTCTTCAGAAATAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000437125.5 ENST00000468326.1 |
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| CDS CAA 90 bp | CTCCCCCGTCAATATTCCCTAGAAATTCATTCTCATCTGCATCTCTaGTACTTCCTATTTCTTCATTGGAAGATGTATCACCGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPRQYSLEIHSHLHL*YFLFLHWKMYHRFH Trigger: ATGGAAGCGGTGATACATCTTCCAATGAAGAAATAGGAAGTACAAGAGATGCAGATGAGAATGAATTTCTAGGGAATATTGACGGGGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000403751.8 ENST00000430487.6 |
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| CDS TCA 72 bp | CCAGAATTTAAAGGGTCCTCTTCTACAATGTTTACTTaGGGGTCTTCATTATCACTACTGTTTGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PEFKGSSSTMFT*GSSLSLLFVAE Trigger: TTCAGCCACAAACAGTAGTGATAATGAAGACCCTCAAGTAAACATTGTAGAAGAGGACCCTTTAAATTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000508440.1 |
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| CDS CAA 72 bp | CTTCATTATCACTACTGTTTGTGGCTGAATCCTCATTaGAAATACTGTCAGCTTCTTCTTCAGGTACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LHYHYCLWLNPH*KYCQLLLQVPS Trigger: TGAAGGTACCTGAAGAAGAAGCTGACAGTATTTCAAATGAGGATTCAGCCACAAACAGTAGTGATAATGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000508440.1 |
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| CDS TCA 72 bp | TCTTCATTGGAAGATGTATCACCGCTTCCATCTACTTaGATTATTTCACCAATATCATCATCAGTAACCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSLEDVSPLPST*IISPISSSVTR Trigger: TCGGGTTACTGATGATGATATTGGTGAAATAATTCAAGTAGATGGAAGCGGTGATACATCTTCCAATGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403751.8 ENST00000430487.6 |
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| CDS CCA 72 bp | TCTCATCTGCATCTCTTGTACTTCCTATTTCTTCATTaGAAGATGTATCACCGCTTCCATCTACTTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: SHLHLLYFLFLH*KMYHRFHLLEL Trigger: TAATTCAAGTAGATGGAAGCGGTGATACATCTTCCAATGAAGAAATAGGAAGTACAAGAGATGCAGATGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403751.8 ENST00000430487.6 |
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| CDS CAA 72 bp | TTCTTCATTGGAAGATGTATCACCGCTTCCATCTACTaGAATTATTTCACCAATATCATCATCAGTAACCCG | + |
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Preference number: 6 (lower is better) Translates to: FFIGRCITASIY*NYFTNIIISNP Trigger: CGGGTTACTGATGATGATATTGGTGAAATAATTCAAGTAGATGGAAGCGGTGATACATCTTCCAATGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000403751.8 ENST00000430487.6 |
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| CDS CAA 72 bp | CAATGTTTACTTGAGGGTCTTCATTATCACTACTGTTaGTGGCTGAATCCTCATTTGAAATACTGTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QCLLEGLHYHYC*WLNPHLKYCQL Trigger: AAGCTGACAGTATTTCAAATGAGGATTCAGCCACAAACAGTAGTGATAATGAAGACCCTCAAGTAAACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000508440.1 |
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| CDS CAA 72 bp | TACAGGTATGTTGCTGGGTTCCTCTATATTTCTTGGTaGCTTTACAGAATCACATCCATACATCCTATTTTT | + |
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Preference number: 6 (lower is better) Translates to: YRYVAGFLYISW*LYRITSIHPIF Trigger: AAAAATAGGATGTATGGATGTGATTCTGTAAAGCAACCAAGAAATATAGAGGAACCCAGCAACATACCTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000403751.8 ENST00000430487.6 ENST00000437125.5 |
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