RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTZ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100577

Ensembl transcript IDs: ENST00000216465.10, ENST00000349555.7, ENST00000361389.8, ENST00000393734.5, ENST00000553268.5, ENST00000553431.5, ENST00000553586.5, ENST00000553770.1, ENST00000553838.5, ENST00000554279.5, ENST00000554381.1, ENST00000554846.5, ENST00000555093.1, ENST00000555208.1, ENST00000555583.1, ENST00000556627.5, ENST00000556914.5, ENST00000557053.5, ENST00000557639.5

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGGCAGGATTTGGGAGCTAGGCCCTCAGCTCAGTGGGTGTATCTaGCTGCCGGCAGGGGTGAGACACCTGGAAGGCCTCCAAGACCAG +
Preference number: 1 (lower is better)
Translates to: RGRIWELGPQLSGCI*LPAGVRHLEGLQDQ
Trigger: CTGGTCTTGGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR CCA 90 bp CCTGTGCCAACGGGGCAGGATTTGGGAGCTAGGCCCTCAGCTCAGTaGGTGTATCTGGCTGCCGGCAGGGGTGAGACACCTGGAAGGCCT +
Preference number: 1 (lower is better)
Translates to: PVPTGQDLGARPSAQ*VYLAAGRGETPGRP
Trigger: AGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR CCA 90 bp ATCTTTCAGCATTTGCCACCTGAGGCACCAAGCACAGATCAGCCATaGTCACCTGAAAGAGGTCCCGGTGGGTTCCCATCAGGGTGCATA +
Preference number: 1 (lower is better)
Translates to: IFQHLPPEAPSTDQP*SPERGPGGFPSGCI
Trigger: TATGCACCCTGATGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR CAA 90 bp CCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCTCAGTGGGTGTATCTGGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: PPSFCSCGPVPTGQD*GARPSAQWVYLAAG
Trigger: GCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR-3UTR CCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
3UTR-3UTR TCA 90 bp CGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCGCATCCACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: RLPRHIDNSIPAHPAPRIHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...GATGCGGGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
3UTR-3UTR CCA 90 bp GCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGCTAGGCCCTAGCACAGATCAGCCATaGTCACCTGAAAGAGGTCCC +
Preference number: 2 (lower is better)
Translates to: ASAPVALCQRGRIWELGPSTDQP*SPERGP
Trigger: GGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCT...AGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR-3UTR CCA 90 bp GGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: GEHARHFNPHSHLSLTTAQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...GGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
3UTR-3UTR CCA 90 bp ACACAGCCTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: TQPSPWCYGEHARHFNPHQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...ATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR-3UTR CCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: PGLEFESPISSIKTLVSRQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
3UTR-3UTR TCA 90 bp CACCTGGAAGGCCTCCAAGACCAGCAGCCTCTTGTTGATGGAGCTGATGGTAGGTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 2 (lower is better)
Translates to: HLEGLQDQQPLVDGADGRSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...CCTACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTTGGAGGCCTTCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR-3UTR CCA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 2 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
3UTR-3UTR TCA 90 bp GCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCACAACAAAAGCGGATaGGAAAAGGCACACAGCCTT +
Preference number: 2 (lower is better)
Translates to: ASRLPRHIDNSIPAHPAPHNKSG*EKAHSL
Trigger: AAGGCTGTGTGCCTTTTCTCATCCGCTTTTGTTGTG...GGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR-3UTR TCA 90 bp CCAAATTTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGACACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: PNFSAGILWSHTQQKRMRHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...TCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR-3UTR TCA 90 bp CTTGTTGATGGAGCTGATGGTAGGGTAGGGGGTGAGATCCACCTTGAATCTTTCTCAGCCATGGTCACCTaGAAGAGGTCCCGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: LVDGADGRVGGEIHLESFSAMVT*KRSRWV
Trigger: AACCCACCGGGACCTCTTTCAGGTGACCATGGCTGA...GAAAGATTCAAGGTGGATCTCACCCCCTACCCTACCATCAGCTCCATCAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR-3UTR CCA 90 bp ATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ISASRLPRHIDNSIPAHPMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...AGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
3UTR-3UTR CCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: LISASRLPRHIDNSIPAHMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
3UTR-3UTR CCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACAGCGCGGGCATTCTTTaGAGTCACACACAACAAAAG +
Preference number: 2 (lower is better)
Translates to: LISASRLPRHIDNSIPAHSAGIL*SHTQQK
Trigger: CTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCT...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR-3UTR CCA 90 bp GGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCAATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GVTVSTPGILIRILISASMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...TGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR CAA 90 bp CTGGGCTTCAGTTTAATTCACGCCAAATTTCAGCGCGGGCATTCTTaGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCACACAGCC +
Preference number: 2 (lower is better)
Translates to: LGFSLIHAKFQRGHS*ESHTTKADEKRHTA
Trigger: GGCTGTGTGCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGGCGTGAATTAAACTGAAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
3UTR-3UTR CCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: DPGLEFESPISSIKTLVSMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
3UTR CCA 72 bp ACGGGGCAGGATTTGGGAGCTAGGCCCTCAGCTCAGTaGGTGTATCTGGCTGCCGGCAGGGGTGAGACACCT +
Preference number: 3 (lower is better)
Translates to: TGQDLGARPSAQ*VYLAAGRGETP
Trigger: AGGTGTCTCACCCCTGCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR CCA 72 bp ATTTGGGAGCTAGGCCCTCAGCTCAGTGGGTGTATCTaGCTGCCGGCAGGGGTGAGACACCTGGAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: IWELGPQLSGCI*LPAGVRHLEGL
Trigger: GAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR-3UTR CAA 90 bp CCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGCTAGGCCCTCAGCTCAGTGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 3 (lower is better)
Translates to: PVALCQRGRIWELGPQLSGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...ACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
3UTR CCA 72 bp CATTTGCCACCTGAGGCACCAAGCACAGATCAGCCATaGTCACCTGAAAGAGGTCCCGGTGGGTTCCCATCA +
Preference number: 3 (lower is better)
Translates to: HLPPEAPSTDQP*SPERGPGGFPS
Trigger: TGATGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRIGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGGGAGGGGTCTGTTATaGGGAGCAGGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWGRGLL*GAGRAE
Trigger: CTCCGCCCTCCCTGCTCCCCATAACAGACCCCTCCC...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR TCA 90 bp GGGGTGAGACACCTGGAAGGCCTCCAAGACCAGCAGCCTCTTGTTGATGGAGCTGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GVRHLEGLQDQQPLVDGAGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...AGCTCCATCAACAAGAGGCTGCTGGTCTTGGAGGCCTTCCAGGTGTCTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR GCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGATGGGCTTCCCCGCCTaGATCTGGCACTTCGCGCGA +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWMGFPA*IWHFAR
Trigger: TCGCGCGAAGTGCCAGATGCAGGCGGGGAAGCCCAT...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
CDS-3UTR GCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATCAGAGCTTCCCCGCCTaGATCTGGCACTTCGCGCGA +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDQSFPA*IWHFAR
Trigger: TCGCGCGAAGTGCCAGATGCAGGCGGGGAAGCTCTG...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557639.5
CDS-3UTR CCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGGTCATGGTATCGTGGTaGCCCTCAGCCTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGVMVSW*PSASQE
Trigger: TTCCTGGGAGGCTGAGGGTCACCACGATACCATGAC...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553586.5
CDS-3UTR GCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGTTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWFAPGT*RRLRLS
Trigger: ACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAA...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGCTCTTCTTTGGGTCCTaGGGCAGAAGTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWLFFGS*GRSRGV
Trigger: CACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAG...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGCTAGGCCCTTCAGCCATGGTCACCTaGAAGAGGTCCCGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ASAPVALCQRGRIWELGPSAMVT*KRSRWV
Trigger: AACCCACCGGGACCTCTTTCAGGTGACCATGGCTGA...AGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAGCAGAAGTCGCGGAGTaGGACGCATCTCCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGAEVAE*DASPLD
Trigger: ATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGC...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRIRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATCAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCTCTTCTTTGGGTCCTaGGGCAGAAGTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFLFFGS*GRSRGV
Trigger: CACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LISASRLPRHIDNSIPAHGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACCGTCTCGTAGTCGATaGCTTTCAAGGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGPSRSR*LSRPEQ
Trigger: TTGCTCTGGCCTTGAAAGGCATCGACTACGAGACGG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR GCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFRTDRF*RGWMPP
Trigger: TGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCT...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTGAGAAACTTCGCGCCTaGGACCTGCCGACGACTAAG +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRIEKLRA*DLPTTK
Trigger: CTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTC...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGCAGAAGTCGCGGAGTaGGACGCATCTCCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGAEVAE*DASPLD
Trigger: ATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGC...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAAGCACAGATCAGCCATaGTCACCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGSTDQP*SPRLLH
Trigger: GTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCT...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
3UTR CAA 72 bp TTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCTCAGTGGGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: FCSCGPVPTGQD*GARPSAQWVYL
Trigger: CAGATACACCCACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRITTKAQ*DSTNQA
Trigger: GGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGT...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp TACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YGEHARHFNPHSHLSLTTGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...AGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000554381.1
CDS-3UTR TCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGCAGGACAGACAGGTTTaGCTGGTGAATGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGQDRQV*LVNGDS
Trigger: GGAATCACCATTCACCAGTCAAACCTGTCTGTCCTG...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349555.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGCCGTCTCGTAGTCGATaGCTTTCAAGGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGPSRSR*LSRPEQ
Trigger: TTGCTCTGGCCTTGAAAGGCATCGACTACGAGACGG...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR GCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGTTCAGGGTTGGCACCTaGTTCATAGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGFRVGT*FIGFSA
Trigger: GGCACTGAATCCTATGAAGCAGGTGCCAACCCTGAA...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCGCATCTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: RLPRHIDNSIPAHPAPRIWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...GATGCGGGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGSICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAAAATCATACGCACGCTaGCCCTCTTCTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGKSYAR*PSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTT...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: ASRLPRHIDNSIPAHPAPRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...GGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGAGCACAGATCAGCCATaGTCACCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGSTDQP*SPRLLH
Trigger: GTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCT...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR CCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGGTAAAGCGAGGGGCTaGACTAGAAAGATCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWGKARG*TRKILP
Trigger: CGGAAGGATCTTTCTAGTCCAGCCCCTCGCTTTACC...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557639.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAATGATGGCCAGCTGTTaGCCCCCATCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGMMASC*PPSFMR
Trigger: TCTCATAAAGGATGGGGGCCAACAGCTGGCCATCAT...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556627.5
CDS-3UTR TCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRISAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAGCTAGGCCCTCAGCTCAGTCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PVALCQRGRIWELGPQLSLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...ACTGAGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR GCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGACTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp ATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTTTCCCCGCCTGCATCTaGCACTTCGCGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: ISASRLPRHIDNSIPAHPFPACI*HFARPP
Trigger: AGGGGGTCGCGCGAAGTGCCAGATGCAGGCGGGGAA...AGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216465.10
CDS-3UTR CCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGAATAGGAATAGAGGATaGGCTTCCCCGCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGNRNRG*ASPPAS
Trigger: AGATGCAGGCGGGGAAGCCCATCCTCTATTCCTATT...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000556627.5
CDS-3UTR CCA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGAAATCATACGCACGCTaGCCCTCTTCTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAHPASAPVALCQRGRIWKSYAR*PSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTT...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATAAATCATACGCACGCTaGCCCTCTTCTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDKSYAR*PSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTT...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: EHARHFNPHSHLSLTTAPRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...CGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR TCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGGTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGVTGEW*FHQSSG
Trigger: CCCTGAAGATTGATGGAATCACCATTCACCAGTCAC...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR TCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGACCTCTAGATACTCAATaGTGGCCAGTGACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGPLDTQ*WPVTGE
Trigger: TTCACCAGTCACTGGCCATCATTGAGTATCTAGAGG...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR TCA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTGGCTGCCGGCAGGGGTaGGACACCTGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IRILISASRLPRHIDNSIGCRQG*DTWKAS
Trigger: GGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCC...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTTTCAGGGTTGGCACCTaGTTCATAGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFFRVGT*FIGFSA
Trigger: GGCACTGAATCCTATGAAGCAGGTGCCAACCCTGAA...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR GCA 90 bp AGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: STPGILIRILISASRLPRWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...ACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp GCACAGATCAGCCATGGTCACCTGAAAGAGGTCCCGGTGGGTTCCCATCAGGGTACTGGGTGTGTCCACTaGGACTCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: AQISHGHLKEVPVGSHQGTGCVH*DSRLLH
Trigger: GTGTAGGAGACGAGAGTCGCAGTGGACACACCCAGT...ACCCTGATGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTAATAGGAATAGAGGATaGGCTTCCCCGCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRINRNRG*ASPPAS
Trigger: AGATGCAGGCGGGGAAGCCCATCCTCTATTCCTATT...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
CDS-3UTR CCA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR CCA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR CCA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTGGGTGGCCACAACTaGATCTTCCTTATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGLGGHN*IFLIWR
Trigger: TCTCCAAATAAGGAAGATCCAGTTGTGGCCACCCAA...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR TCA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTATGGCCAGTGACTGGTaGATGGTGATTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: SSAHPASAPVALCQRGRIMASDW*MVIPSI
Trigger: GATTGATGGAATCACCATTCACCAGTCACTGGCCAT...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GCACAGATCAGCCATGGTCACCTGAAAGAGGTCCCGGTGGGTTCCCATCAGGGTGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: AQISHGHLKEVPVGSHQGGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...ACCCTGATGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp GCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: ASRLPRHIDNSIPAHPAPSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...GGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp CGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCGCATCGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLPRHIDNSIPAHPAPRIVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...GATGCGGGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGAATCTTTCAGCATTTaGCACCTGAGGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFESFSI*HLRHQA
Trigger: TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTC...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp ACACAGCCTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATGAGAAACTTCGCGCCTaGGACCTGCCGACGACTAAG +
Preference number: 4 (lower is better)
Translates to: TQPSPWCYGEHARHFNPHEKLRA*DLPTTK
Trigger: CTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTC...ATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216465.10
CDS-3UTR CCA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGATCAATCTTCAGGGTTaGCACCTGCTTCATAGGATT +
Preference number: 4 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGINLQG*HLLHRI
Trigger: AATCCTATGAAGCAGGTGCCAACCCTGAAGATTGAT...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GEHARHFNPHSHLSLTTAQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...GGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCCAGCTTCTGCTCCTGTaGCCCTGTGCCAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPQLLLL*PCANGA
Trigger: TGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTG...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATACACAGCCTTCCCCGTaGTGTTACGGTGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: ARHFNPHSHLSLTTAPSHTQPSP*CYGEHA
Trigger: GGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT...ATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp AGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTAGTCAGTGGCTGGACTaGGTGTGTCCACTGCGACTC +
Preference number: 4 (lower is better)
Translates to: STPGILIRILISASRLPRSQWLD*VCPLRL
Trigger: GAGTCGCAGTGGACACACCCAGTCCAGCCACTGACT...ACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR TCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR TCA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTAGGGCGGAGCAGAAGTaGAGCGCGACCGGACAGCGA +
Preference number: 4 (lower is better)
Translates to: IRILISASRLPRHIDNSIRAEQK*SATGQR
Trigger: TCGCTGTCCGGTCGCGCTTCACTTCTGCTCCGCCCT...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR GCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCTTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPFAPGT*RRLRLS
Trigger: ACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAA...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp TACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: YGEHARHFNPHSHLSLTTWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...AGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000554381.1
CDS-3UTR GCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp GCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASRLPRHIDNSIPAHPAPSICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...GGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGATCCTTAGAAAACTGTTaGCCCCCATCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGSLENC*PPSFMR
Trigger: TCTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGA...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCATGGCCAGTGACTGGTaGATGGTGATTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: ASRLPRHIDNSIPAHPAPMASDW*MVIPSI
Trigger: GATTGATGGAATCACCATTCACCAGTCACTGGCCAT...GGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR TCA 90 bp AGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: STPGILIRILISASRLPRSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...ACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR TCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR TCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCCACCCCACATGCGTGTaGCAGATGAGGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLHPTCV*QMRGLR
Trigger: CCTCAGTCCCCTCATCTGTCACACGCATGTGGGGTG...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR GCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTTTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTFAPGT*RRLRLS
Trigger: ACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAA...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
CDS-3UTR GCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPRTDRF*RGWMPP
Trigger: TGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCT...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCTGGGCCCAGGTCAGCTaGATCTCCTCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLWAQVS*ISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCA...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp GGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GEHARHFNPHSHLSLTTAVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...GGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp GCACCAAGCACAGATCAGCCATGGTCACCTGAAAGAGGTCCCGGTGGGTTCCCAGAATCTTTCAGCATTTaGCACCTGAGGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: APSTDQPWSPERGPGGFPESFSI*HLRHQA
Trigger: TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTC...TGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGAGAAACTTCGCGCCTaGGACCTGCCGACGACTAAG +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPEKLRA*DLPTTK
Trigger: CTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTC...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCAGGTTCTGCAGGGGCTaGATGCCACCAGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSRFCRG*MPPAMR
Trigger: CCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCT...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCCAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRQVMAF*AQVSCI
Trigger: GATGCAGCTGACCTGGGCCCAGAACGCCATCACTTG...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCGGCTACAGGGACTCCTaGTGCCAAGGGACAGGGACT +
Preference number: 4 (lower is better)
Translates to: FSAGILWSHTQQKRMRKGGYRDS*CQGTGT
Trigger: AGTCCCTGTCCCTTGGCACCAGGAGTCCCTGTAGCC...GCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR TCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPTTKAQ*DSTNQA
Trigger: GGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGT...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCTTCTTTGGGTCCTaGGGCAGAAGTCGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTLFFGS*GRSRGV
Trigger: CACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAG...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR TCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: LISASRLPRHIDNSIPAHGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR TCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTAGATACTCAATaGTGGCCAGCTGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRPLDTQ*WPAVGP
Trigger: GGGGCCAACAGCTGGCCATCATTGAGTATCTAGAGG...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556627.5
CDS-3UTR GCA 90 bp CCAAATTTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGATTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PNFSAGILWSHTQQKRMRFAPGT*RRLRLS
Trigger: ACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAA...TCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216465.10
CDS-3UTR GCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQRTDRF*RGWMPP
Trigger: TGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCT...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp CTTGTTGATGGAGCTGATGGTAGGGTAGGGGGTGAGATCCACCTTGAATCTTTCAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: LVDGADGRVGGEIHLESFRTDRF*RGWMPP
Trigger: TGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCT...GAAAGATTCAAGGTGGATCTCACCCCCTACCCTACCATCAGCTCCATCAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR GCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTAGGACAGACAGGTTCTaGAGGGGCTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTRTDRF*RGWMPP
Trigger: TGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCT...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR GCA 90 bp CCAAATTTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAACAGCGACTCCACCCTaGTACGCACTCCCTACCAGG +
Preference number: 4 (lower is better)
Translates to: PNFSAGILWSHTQQKRMRTATPP*YALPTR
Trigger: CCTGGTAGGGAGTGCGTAGCAGGGTGGAGTCGCTGT...TCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR GCA 90 bp CGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCGCATCAATAGAGGATGGGCTTaGCAGACTCTGTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: RLPRHIDNSIPAHPAPRINRGWA*QTLSWY
Trigger: ATACCATGACAGAGTCTGGCAAGCCCATCCTCTATT...GATGCGGGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553586.5
CDS-3UTR CCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCGAGAAACTTCGCGCCTaGGACCTGCCGACGACTAAG +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSEKLRA*DLPTTK
Trigger: CTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTC...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGCAGAAGTCGCGGAGTaGGACGCATCTCCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPAEVAE*DASPLD
Trigger: ATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGC...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTACACAGCCTTCCCCGTaGTGTTACGGTGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: IRILISASRLPRHIDNSITQPSP*CYGEHA
Trigger: GGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp GAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGAGCGCGGGCATTCTTTaGAGTCACACACAACAAAAG +
Preference number: 4 (lower is better)
Translates to: EHARHFNPHSHLSLTTAPSAGIL*SHTQQK
Trigger: CTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCT...CGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp CGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCACACAAGGGCTGCGAGAAATTaGGAGGCTTGGGGCGACGTT +
Preference number: 4 (lower is better)
Translates to: RGHSLESHTTKADEKRHTRAARN*EAWGDV
Trigger: AACGTCGCCCCAAGCCTCCCAATTTCTCGCAGCCCT...TGTGTGCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR TCA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSTTKAQ*DSTNQA
Trigger: GGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGT...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCGTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GEHARHFNPHSHLSLTTAVTGEW*FHQSSG
Trigger: CCCTGAAGATTGATGGAATCACCATTCACCAGTCAC...GGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR TCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp TTCAGCATTTGCCACCTGAGGCACCAAGCACAGATCAGCCATGGTCACCTGAAATCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: FSICHLRHQAQISHGHLKSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...TTTCAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp TGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGGCCAAGAGAAGAGCATaGAGGGCTGCGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: CYGEHARHFNPHSHLSLTAKRRA*RAARNW
Trigger: CCAATTTCTCGCAGCCCTTCATGCTCTTCTCTTGGC...CGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR GCA 90 bp GGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACCGTCTCGTAGTCGATaGCTTTCAAGGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: GVTVSTPGILIRILISASPSRSR*LSRPEQ
Trigger: TTGCTCTGGCCTTGAAAGGCATCGACTACGAGACGG...TGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR GCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACTTCAGGGTTGGCACCTaGTTCATAGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LISASRLPRHIDNSIPAHFRVGT*FIGFSA
Trigger: GGCACTGAATCCTATGAAGCAGGTGCCAACCCTGAA...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR GCA 90 bp GGGGGTGAGATCCACCTTGAATCTTTCAGCATTTGCCACCTGAGGCACCAAGCAAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGEIHLESFSICHLRHQASICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGCAGAAGTCGCGGAGTaGGACGCATCTCCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLAEVAE*DASPLD
Trigger: ATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGC...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTGCAGAAGTCGCGGAGTaGGACGCATCTCCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTAEVAE*DASPLD
Trigger: ATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGC...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR CCA 90 bp ACACAGCCTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TQPSPWCYGEHARHFNPHMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...ATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp AGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: STPGILIRILISASRLPRMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...ACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp GCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATTCGAAGAGGAGGAATTaGGTGGCCACAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: ARHFNPHSHLSLTTAPSHSKRRN*VATTGS
Trigger: AGATCCAGTTGTGGCCACCCAATTCCTCCTCTTCGA...ATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR TCA 90 bp TTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: LIRILISASRLPRHIDNSTTKAQ*DSTNQA
Trigger: GGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGT...ACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216465.10
CDS-3UTR TCA 90 bp CTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCATGGCCAGTGACTGGTaGATGGTGATTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: LPRGVTVSTPGILIRILIMASDW*MVIPSI
Trigger: GATTGATGGAATCACCATTCACCAGTCACTGGCCAT...GATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR TCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGGGATGCCACCAGCGATaGGGTCAGAAATCATACGCA +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQGCHQR*GQKSYA
Trigger: TGCGTATGATTTCTGACCTCATCGCTGGTGGCATCC...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSSAFAT*GTKHRS
Trigger: TGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGA...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR TCA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCACAACAAAAGCGGATaGGAAAAGGCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LISASRLPRHIDNSIPAHHNKSG*EKAHSL
Trigger: AAGGCTGTGTGCCTTTTCTCATCCGCTTTTGTTGTG...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR GCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCCCGTCTCGTAGTCGATaGCTTTCAAGGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSPSRSR*LSRPEQ
Trigger: TTGCTCTGGCCTTGAAAGGCATCGACTACGAGACGG...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR GCA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGTCTCGTAGTCGATaGCTTTCAAGGCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSPSRSR*LSRPEQ
Trigger: TTGCTCTGGCCTTGAAAGGCATCGACTACGAGACGG...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR GCA 90 bp TTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FSAGILWSHTQQKRMRKGVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...GCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR GCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTGCTCTGTAGGATCTaGTCCAGGGCGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLVLCRI*SRALKP
Trigger: TGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCAC...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPSICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp ATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGAATCTTTCAGCATTTaGCACCTGAGGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: ISASRLPRHIDNSIPAHPESFSI*HLRHQA
Trigger: TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTC...AGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGAGCACAGATCAGCCATaGTCACCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQSTDQP*SPRLLH
Trigger: GTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCT...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCAGAAATTGGGAGGCTTaGGGCGACGTTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLRNWEA*GDVWKP
Trigger: AGGCTTCCAAACGTCGCCCCAAGCCTCCCAATTTCT...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR CCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCTGCCAGACTCTGTCATaGTATCGTGGTGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSCQTLS*YRGDPQ
Trigger: CTGAGGGTCACCACGATACCATGACAGAGTCTGGCA...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553586.5
CDS-3UTR CCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGAGCACAGATCAGCCATaGTCACCTGAAAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQSTDQP*SPERGP
Trigger: GGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCT...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR TCA 90 bp CTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCAATTCGAACTCTCCATaGGCAGGAGCTTCGGAAATA +
Preference number: 4 (lower is better)
Translates to: LPRGVTVSTPGILIRILINSNSP*AGASEI
Trigger: TATTTCCGAAGCTCCTGCTCATGGAGAGTTCGAATT...GATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR TCA 90 bp TACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTCCTCTAGATACTCAATaGTGGCCAGTGACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: YGEHARHFNPHSHLSLTTPLDTQ*WPVTGE
Trigger: TTCACCAGTCACTGGCCATCATTGAGTATCTAGAGG...AGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR TCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCCCTCTAGATACTCAATaGTGGCCAGTGACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPPLDTQ*WPVTGE
Trigger: TTCACCAGTCACTGGCCATCATTGAGTATCTAGAGG...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR GCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTTTCAGGGTTGGCACCTaGTTCATAGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTFRVGT*FIGFSA
Trigger: GGCACTGAATCCTATGAAGCAGGTGCCAACCCTGAA...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
CDS-3UTR GCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCTTCAGGGTTGGCACCTaGTTCATAGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSFRVGT*FIGFSA
Trigger: GGCACTGAATCCTATGAAGCAGGTGCCAACCCTGAA...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR GCA 90 bp ATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILISASRLPRHIDNSIPASICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...GGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLSICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGAGTATATGCCCGCTGTaGTCTGTAGGATCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQSICPL*SVGSAP
Trigger: TGGAGCAGATCCTACAGAGCACAGCGGGCATATACT...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR GCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTAATAGGAATAGAGGATaGGCTTCCCCGCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTNRNRG*ASPPAS
Trigger: AGATGCAGGCGGGGAAGCCCATCCTCTATTCCTATT...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000556627.5
CDS-3UTR CCA 90 bp ACACAGCCTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATATCAATCTTCAGGGTTaGCACCTGCTTCATAGGATT +
Preference number: 4 (lower is better)
Translates to: TQPSPWCYGEHARHFNPHINLQG*HLLHRI
Trigger: AATCCTATGAAGCAGGTGCCAACCCTGAAGATTGAT...ATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAGGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp GGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCATCAATCTTCAGGGTTaGCACCTGCTTCATAGGATT +
Preference number: 4 (lower is better)
Translates to: GEHARHFNPHSHLSLTTAINLQG*HLLHRI
Trigger: AATCCTATGAAGCAGGTGCCAACCCTGAAGATTGAT...GGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR CCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTAAATCATACGCACGCTaGCCCTCTTCTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTKSYAR*PSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTT...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
CDS-3UTR CCA 90 bp TTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTAGCACAGATCAGCCATaGTCACCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: LIRILISASRLPRHIDNSSTDQP*SPRLLH
Trigger: GTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCT...ACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR TCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLVTGEW*FHQSSG
Trigger: CCCTGAAGATTGATGGAATCACCATTCACCAGTCAC...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCTCTAGATACTCAATaGTGGCCAGTGACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQPLDTQ*WPVTGE
Trigger: TTCACCAGTCACTGGCCATCATTGAGTATCTAGAGG...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR TCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCCACAACAAAAGCGGATaGGAAAAGGCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSHNKSG*EKAHSL
Trigger: AAGGCTGTGTGCCTTTTCTCATCCGCTTTTGTTGTG...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR TCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTTTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPLTGEW*FHQSSG
Trigger: CCCTGAAGATTGATGGAATCACCATTCACCAGTCAA...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349555.7
CDS-3UTR GCA 90 bp TTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LIRILISASRLPRHIDNSLLHSI*PLCSVG
Trigger: TCCTACAGAGCACAGCGGGCATATACTGTGTAGGAG...ACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR GCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCGAATCTTTCAGCATTTaGCACCTGAGGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSESFSI*HLRHQA
Trigger: TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTC...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CCA 90 bp CTTCCCCGTGGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCATCAATCTTCAGGGTTaGCACCTGCTTCATAGGATT +
Preference number: 4 (lower is better)
Translates to: LPRGVTVSTPGILIRILIINLQG*HLLHRI
Trigger: AATCCTATGAAGCAGGTGCCAACCCTGAAGATTGAT...GATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACCACGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTAAATCATACGCACGCTaGCCCTCTTCTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IRILISASRLPRHIDNSIKSYAR*PSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTT...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR CCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTATGAGGGGACTGAGGTaGAACAAGTTTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTMRGLR*NKFQQE
Trigger: TTCCTGCTGAAACTTGTTCCACCTCAGTCCCCTCAT...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR CCA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGCGCGGGCATTCTTTaGAGTCACACACAACAAAAG +
Preference number: 4 (lower is better)
Translates to: DPGLEFESPISSIKTLVSSAGIL*SHTQQK
Trigger: CTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCT...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR TCA 90 bp TTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTGTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LIRILISASRLPRHIDNSVTGEW*FHQSSG
Trigger: CCCTGAAGATTGATGGAATCACCATTCACCAGTCAC...ACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR TCA 90 bp TTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATGGCCAGTGACTGGTaGATGGTGATTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: LIRILISASRLPRHIDNSMASDW*MVIPSI
Trigger: GATTGATGGAATCACCATTCACCAGTCACTGGCCAT...ACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR TCA 90 bp GAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGGACAGGTTTGACTGGTaGATGGTGATTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: EFESPISSIKTLVSRPLQDRFDW*MVIPSI
Trigger: GATTGATGGAATCACCATTCACCAGTCAAACCTGTC...CTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349555.7
CDS-3UTR GCA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTGAATCTTTCAGCATTTaGCACCTGAGGCACCAAGCA +
Preference number: 4 (lower is better)
Translates to: IRILISASRLPRHIDNSIESFSI*HLRHQA
Trigger: TGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTC...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS-3UTR CCA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGTCCTTAGAAAACTGTTaGCCCCCATCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: PGLEFESPISSIKTLVSRSLENC*PPSFMR
Trigger: TCTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGA...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCTCCTTAGAAAACTGTTaGCCCCCATCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: FESPISSIKTLVSRPLQPSLENC*PPSFMR
Trigger: TCTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGA...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTTCCTTAGAAAACTGTTaGCCCCCATCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: GLEFESPISSIKTLVSRPSLENC*PPSFMR
Trigger: TCTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGA...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCATCAATCTTCAGGGTTaGCACCTGCTTCATAGGATT +
Preference number: 4 (lower is better)
Translates to: KADPGLEFESPISSIKTLINLQG*HLLHRI
Trigger: AATCCTATGAAGCAGGTGCCAACCCTGAAGATTGAT...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CCA 90 bp TTTAATTCACGCCAAATTTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCACAGATCAGCCATaGTCACCTCGTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: FNSRQISARAFFGVTHNKSTDQP*SPRLLH
Trigger: GTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCT...TTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGGCGTGAATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CCA 90 bp AGGAAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTTGGATCTTCCTTATTTaGAGATGCAACTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RKADPGLEFESPISSIKTWIFLI*RCNSLS
Trigger: GGAAAGGGAGTTGCATCTCCAAATAAGGAAGATCCA...AGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS-3UTR CCA 90 bp TTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCAATAGGAATAGAGGATaGGCTTTTGTGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: FSAGILWSHTQQKRMRKGNRNRG*AFVEKV
Trigger: TACTTTCTCCACAAAAGCCCATCCTCTATTCCTATT...GCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393734.5
3UTR CAA 72 bp AGTTTAATTCACGCCAAATTTCAGCGCGGGCATTCTTaGGAGTCACACACAACAAAAGCGGATGAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SLIHAKFQRGHS*ESHTTKADEKR
Trigger: CCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGGCGTGAATTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS GCA 90 bp GAGGGCGGAGCAGAAGTGAAGCGCGACCGGACAGCGACTCCACCCTaGTACGCACTCCCTACCAGGACCGCCTCCTCTGGCCCAACCCTC +
Preference number: 5 (lower is better)
Translates to: EGGAEVKRDRTATPP*YALPTRTASSGPTL
Trigger: GAGGGTTGGGCCAGAGGAGGCGGTCCTGGTAGGGAGTGCGTAGCAGGGTGGAGTCGCTGTCCGGTCGCGCTTCACTTCTGCTCCGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393734.5
ENST00000554846.5
CDS GCA 90 bp CGCGCGACCCCCTCCTCCAGGCCGAGAAACTTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGTGAGACTCGACGAATCAGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: RATPSSRPRNFAPGT*RRLRLSETRRIRPV
Trigger: CACGGGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTCGGCCTGGAGGAGGGGGTCGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000553431.5
ENST00000553770.1
ENST00000553838.5
ENST00000554279.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS CCA 90 bp GTGGGCTCAGGGACCGAGGTTCCCAGAAGTGCTGGAGCTAAGGTCTaGATGCCCACCCAGCCCATTGCCTCCCCAGTCCTGCCCTCATCC +
Preference number: 5 (lower is better)
Translates to: VGSGTEVPRSAGAKV*MPTQPIASPVLPSS
Trigger: GGATGAGGGCAGGACTGGGGAGGCAATGGGCTGGGTGGGCATCCAGACCTTAGCTCCAGCACTTCTGGGAACCTCGGTCCCTGAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS GCA 90 bp CCCAAAGCAGCCTGGGAGGCTGGTTCAGATACCCAGGCCCCTGTGTaGGAGGGCCATACCTCTAAGAGGCCACTGTGGGGCAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: PKAAWEAGSDTQAPV*EGHTSKRPLWGSSQ
Trigger: CTGTGAGCTGCCCCACAGTGGCCTCTTAGAGGTATGGCCCTCGCACACAGGGGCCTGGGTATCTGAACCAGCCTCCCAGGCTGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS GCA 90 bp GAGCTAAGGTCTGGATGCCCACCCAGCCCATTGCCTCCCCAGTCCTaGCCTCATCCATGCAACTGTCAGGCCCAAAGCAGCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ELRSGCPPSPLPPQS*PHPCNCQAQSSLGG
Trigger: GCCTCCCAGGCTGCTTTGGGCCTGACAGTTGCATGGATGAGGGCAGGACTGGGGAGGCAATGGGCTGGGTGGGCATCCAGACCTTAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CCA 90 bp CCCAGTCCTGCCCTCATCCATGCAACTGTCAGGCCCAAAGCAGCCTaGGAGGCTGGTTCAGATACCCAGGCCCCTGTGTGCGAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: PSPALIHATVRPKAA*EAGSDTQAPVCEGH
Trigger: ATGGCCCTCGCACACAGGGGCCTGGGTATCTGAACCAGCCTCCCAGGCTGCTTTGGGCCTGACAGTTGCATGGATGAGGGCAGGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS-3UTR CAA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGCGCTGGCCCTCTTCTTaGGGTCCTGAGGCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: SAHPASAPVALCQRGRIWRWPSS*GPEAEV
Trigger: GACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCG...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAGAGAAATTGGGAGGCTaGGGGCGACGTTTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGEKLGG*GRRLEA
Trigger: GGCTTCCAAACGTCGCCCCAAGCCTCCCAATTTCTC...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS GCA 90 bp GGAGGGAAGGCCAAAGCACACAGGCCGTACAGACAGCACCTATATTaGTCCGGCTTCTGGCTCAGCCAGGGCAGAGGTACTGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: GGKAKAHRPYRQHLY*SGFWLSQGRGTGAQ
Trigger: CTGGGCGCCAGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCTGTGTGCTTTGGCCTTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTCGCTGGCCCTCTTCTTaGGGTCCTGAGGCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSAHPASAPVALCQRGRIRWPSS*GPEAEV
Trigger: GACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCG...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCGCTGGCCCTCTTCTTaGGGTCCTGAGGCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFRWPSS*GPEAEV
Trigger: GACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGACCAGCAGCCTCTTGTaGATGGAGCTGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGTSSLL*MELMVG
Trigger: CCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGT...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS TCA 90 bp GCCGAGAAACTTCGCGCCTGGGACCTGCCGACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCCCGTGTCTTTCGTCCGGGTAAAGCG +
Preference number: 5 (lower is better)
Translates to: AEKLRAWDLPTTKAQ*DSTNQARVFRPGKA
Trigger: CGCTTTACCCGGACGAAAGACACGGGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000553431.5
ENST00000553770.1
ENST00000553838.5
ENST00000554279.5
ENST00000556627.5
ENST00000557639.5
CDS TCA 90 bp CTTTCACCCATCCCACCTCCAATTCTTGTCTGCCCTAGGCCTGCATaGGTCTGTCCCCCGGAGCTGAAGTGCCCTCCCAGGCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: LSPIPPPILVCPRPA*VCPPELKCPPRPCS
Trigger: GGAGCATGGCCTGGGAGGGCACTTCAGCTCCGGGGGACAGACTCATGCAGGCCTAGGGCAGACAAGAATTGGAGGTGGGATGGGTGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 90 bp GAGGCCCCCAAAGGGGCAGCTAGCCTGAGAGTGCCTTCCATACCTTaGCAGACTCTGTCATGGTATCGTGGTGACCCTCAGCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: EAPKGAASLRVPSIP*QTLSWYRGDPQPPR
Trigger: CCTGGGAGGCTGAGGGTCACCACGATACCATGACAGAGTCTGGCAAGGTATGGAAGGCACTCTCAGGCTAGCTGCCCCTTTGGGGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS GCA 90 bp GTCTGTCCCCCGGAGCTGAAGTGCCCTCCCAGGCCATGCTCCAGTTaGCCTGACAACCAACTCTGTGGGTTGAGAGGGCCAGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: VCPPELKCPPRPCSS*PDNQLCGLRGPEKM
Trigger: CATCTTCTCTGGCCCTCTCAACCCACAGAGTTGGTTGTCAGGGCAACTGGAGCATGGCCTGGGAGGGCACTTCAGCTCCGGGGGACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp TCGACGAATCAGGCCCGTGTCTTTCGTCCGGGTAAAGCGAGGGGCTaGACTAGAAAGATCCTTCCGGTCGCCTCTGGCTCGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: STNQARVFRPGKARG*TRKILPVASGSPSS
Trigger: AGAGCTGGGCGAGCCAGAGGCGACCGGAAGGATCTTTCTAGTCCAGCCCCTCGCTTTACCCGGACGAAAGACACGGGCCTGATTCGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361389.8
ENST00000553838.5
CDS CCA 90 bp ACAAGCCCTGCCACTGGCCACGGTGACAGCTCTCACTCTGATGGCTaGCGCTGTGCTGGCCTTGGTTTCCCAGCTGGAGTAGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TSPATGHGDSSHSDG*RCAGLGFPAGVGSE
Trigger: TTCACTGCCTACTCCAGCTGGGAAACCAAGGCCAGCACAGCGCCAGCCATCAGAGTGAGAGCTGTCACCGTGGCCAGTGGCAGGGCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS-3UTR CAA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGACATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGAAATGATGGCCAGCTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: PLQPTQLLLLWPCANGAGNDGQL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGCTGGCCATCATT...TCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556627.5
CDS TCA 90 bp TCCCCCGGAGCTGAAGTGCCCTCCCAGGCCATGCTCCAGTTGCCCTaGCAACCAACTCTGTGGGTTGAGAGGGCCAGAGAAGATGGATTG +
Preference number: 5 (lower is better)
Translates to: SPGAEVPSQAMLQLP*QPTLWVERAREDGL
Trigger: CAATCCATCTTCTCTGGCCCTCTCAACCCACAGAGTTGGTTGTCAGGGCAACTGGAGCATGGCCTGGGAGGGCACTTCAGCTCCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS TCA 90 bp CAATTCTTGTCTGCCCTAGGCCTGCATGAGTCTGTCCCCCGGAGCTaGAGTGCCCTCCCAGGCCATGCTCCAGTTGCCCTGACAACCAAC +
Preference number: 5 (lower is better)
Translates to: QFLSALGLHESVPRS*SALPGHAPVALTTN
Trigger: GTTGGTTGTCAGGGCAACTGGAGCATGGCCTGGGAGGGCACTTCAGCTCCGGGGGACAGACTCATGCAGGCCTAGGGCAGACAAGAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp TCCGGCTTCTGGCTCAGCCAGGGCAGAGGTACTGGCGCCCAGGGATaGGTTCATCTTCTTGGAGGAAAGTTTCTCCTGGCACCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SGFWLSQGRGTGAQG*VHLLGGKFLLAPSA
Trigger: AGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAAGATGAACCCATCCCTGGGCGCCAGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GTCCCGGTGGGTTCCCATCAGGGTGCATACCCCAGAGTCAGTGGCTaGACTGGGTGTGTCCACTGCGACTCTACTGGGGGTACCAACAAT +
Preference number: 5 (lower is better)
Translates to: VPVGSHQGAYPRVSG*TGCVHCDSTGGTNN
Trigger: ATTGTTGGTACCCCCAGTAGAGTCGCAGTGGACACACCCAGTCCAGCCACTGACTCTGGGGTATGCACCCTGATGGGAACCCACCGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS-3UTR CAA 90 bp CTCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: LFSPPSFCSCGPVPTGQDHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...ATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: QPTQLLLLWPCANGAGFGKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...CCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: EHARHFNPHSHLSLTTAPPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...CGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS TCA 90 bp CAGGGACTGCTGGTGACCACTCCTGCTAGGGCCAAGAGAAGAGCATaGAGGGCTGCGAGAAATTGGGAGGCTTGGGGCGACGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: QGLLVTTPARAKRRA*RAARNWEAWGDVWK
Trigger: CTTCCAAACGTCGCCCCAAGCCTCCCAATTTCTCGCAGCCCTTCATGCTCTTCTCTTGGCCCTAGCAGGAGTGGTCACCAGCAGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393734.5
ENST00000554846.5
CDS TCA 90 bp GAGGGCCATACCTCTAAGAGGCCACTGTGGGGCAGCTCACAGAGGTaGGGACTCACCGTTAAAGCCACAAGTGATGGCGTTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: EGHTSKRPLWGSSQR*GLTVKATSDGVLGP
Trigger: TGGGCCCAGAACGCCATCACTTGTGGCTTTAACGGTGAGTCCTCACCTCTGTGAGCTGCCCCACAGTGGCCTCTTAGAGGTATGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS GCA 90 bp TGGGTGGGCTCCAGCTTGGGAGGAGTCAACCATTTCTTCCTGTCCTaGCAGGCCTCCTCTCTCAGGCCTGCATCTGTGCAAATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: WVGSSLGGVNHFFLS*QASSLRPASVQIRA
Trigger: TGCCCTGATTTGCACAGATGCAGGCCTGAGAGAGGAGGCCTGGCAGGACAGGAAGAAATGGTTGACTCCTCCCAAGCTGGAGCCCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS CCA 90 bp AGGTGTGCAAGGGTGCAAGTGTACAAGTGCCACACCTGCAGGGGCTaGATGCCACCAGCGATGAGGTCAGAAATCATACGCACGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RCARVQVYKCHTCRG*MPPAMRSEIIRTLA
Trigger: GGCCAGCGTGCGTATGATTTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGGTGTGGCACTTGTACACTTGCACCCTTGCACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS CCA 90 bp GTCCCGGTGGGTTCCCATCAGGGTGCATACCCCAGAGTCAGTGGCTaGACTGGGTGTGTCCACTGCGACTCTCGTCTCCTACACAGTATA +
Preference number: 5 (lower is better)
Translates to: VPVGSHQGAYPRVSG*TGCVHCDSRLLHSI
Trigger: TATACTGTGTAGGAGACGAGAGTCGCAGTGGACACACCCAGTCCAGCCACTGACTCTGGGGTATGCACCCTGATGGGAACCCACCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS CCA 90 bp AAAGCACACAGGCCGTACAGACAGCACCTATATTGCTCCGGCTTCTaGCTCAGCCAGGGCAGAGGTACTGGCGCCCAGGGATGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: KAHRPYRQHLYCSGF*LSQGRGTGAQGWVH
Trigger: ATGAACCCATCCCTGGGCGCCAGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCTGTGTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GGATCTGCTCCAGGGCTGTGGGGAGGCCACATAAACATCTTATTCTaGGCGCAGGGAGGGGACACAAAGCTTTCTGGGCCTTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GSAPGLWGGHINILF*AQGGDTKLSGPWPP
Trigger: TGGAGGCCAAGGCCCAGAAAGCTTTGTGTCCCCTCCCTGCGCCCAGAATAAGATGTTTATGTGGCCTCCCCACAGCCCTGGAGCAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp GGTGGGTTCCCATCAGGGTGCATACCCCAGAGTCAGTGGCTGGACTaGGTGTGTCCACTGCGACTCTACTGGGGGTACCAACAATCTGCT +
Preference number: 5 (lower is better)
Translates to: GGFPSGCIPQSQWLD*VCPLRLYWGYQQSA
Trigger: AGCAGATTGTTGGTACCCCCAGTAGAGTCGCAGTGGACACACCCAGTCCAGCCACTGACTCTGGGGTATGCACCCTGATGGGAACCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS-3UTR CAA 90 bp CTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: LQPTQLLLLWPCANGAGFHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...AAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCCTGCTCCCCGCATCTCCCTACTCCACCCCACATGCGTGTGACAGATGAGGGGGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: PCSPHLPTPPHMRVTDEGGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...CCCCTCATCTGTCACACGCATGTGGGGTGGAGTAGGGAGATGCGGGGAGCAGGG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
CDS-3UTR CAA 90 bp AGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGGAAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: SPPSFCSCGPVPTGQDLGKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...TCCCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp TCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTTGGCAGCGCGGGCATTCTTaGGAGTCACACACAACAAAA +
Preference number: 5 (lower is better)
Translates to: SAHPASAPVALCQRGRIWQRGHS*ESHTTK
Trigger: TTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTG...CCAAATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS TCA 90 bp GCTTCAGGACAGACAGGTTCTGCAGGGGCTGGATGCCACCAGCGATaGGGTCAGAAATCATACGCACGCTGGCCCTCTTCTTTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ASGQTGSAGAGCHQR*GQKSYARWPSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000216465.10
ENST00000361389.8
ENST00000393734.5
ENST00000553431.5
ENST00000553586.5
ENST00000554279.5
ENST00000555093.1
ENST00000556627.5
ENST00000557639.5
CDS GCA 90 bp GCACACCTTGCCACCTTGTCCCACAAGGGAGAGCCAGCAGCCTCCTaGAGTGATAGTCCACAAGACACAGGTTCACTTCTCTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: AHLATLSHKGEPAAS*SDSPQDTGSLLWGR
Trigger: TCTGCCCCAGAGAAGTGAACCTGTGTCTTGTGGACTATCACTGCAGGAGGCTGCTGGCTCTCCCTTGTGGGACAAGGTGGCAAGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS GCA 90 bp GAGGATGGGCTGAGGAGAGAGAGGATGAAGGCGCGTGTTAACCCATaGTGGGTGGGCTCCAGCTTGGGAGGAGTCAACCATTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: EDGLRRERMKARVNP*WVGSSLGGVNHFFL
Trigger: CAGGAAGAAATGGTTGACTCCTCCCAAGCTGGAGCCCACCCAGCATGGGTTAACACGCGCCTTCATCCTCTCTCTCCTCAGCCCATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS CCA 90 bp GTAGGCAGTGAAGCTGAAGTTGGGCCATCCAGCTATGAAGGGCTGTaGGCTCAGGGACCGAGGTTCCCAGAAGTGCTGGAGCTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: VGSEAEVGPSSYEGL*AQGPRFPEVLELRS
Trigger: AGACCTTAGCTCCAGCACTTCTGGGAACCTCGGTCCCTGAGCCCACAGCCCTTCATAGCTGGATGGCCCAACTTCAGCTTCACTGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CCA 90 bp GGGATGAGGGAGGTCCACAAGACCGGCTTCCAGAGATTTCCAGCCTaGCTCCATCTTGGCACCCCTGGAGCCATTTTCCCTCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GMREVHKTGFQRFPA*LHLGTPGAIFPLFP
Trigger: AGGAAACAGAGGGAAAATGGCTCCAGGGGTGCCAAGATGGAGCCAGGCTGGAAATCTCTGGAAGCCGGTCTTGTGGACCTCCCTCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp CACAGTATATGCCCGCTGTGCTCTGTAGGATCTGCTCCAGGGCTGTaGGGAGGCCACATAAACATCTTATTCTGGGCGCAGGGAGGGGAC +
Preference number: 5 (lower is better)
Translates to: HSICPLCSVGSAPGL*GGHINILFWAQGGD
Trigger: GTCCCCTCCCTGCGCCCAGAATAAGATGTTTATGTGGCCTCCCCACAGCCCTGGAGCAGATCCTACAGAGCACAGCGGGCATATACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp TCCCTCTTAAGACGGTTTAGTGGGAGTGAGCTGAGGAGTGCCCCATaGCACAGAGATCCCCCTGCAGACGCCTTCTCAGGAAGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLLRRFSGSELRSAP*HRDPPADAFSGSSE
Trigger: CTCAGAGCTTCCTGAGAAGGCGTCTGCAGGGGGATCTCTGTGCCATGGGGCACTCCTCAGCTCACTCCCACTAAACCGTCTTAAGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS-3UTR CAA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: SSAHPASAPVALCQRGRIGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: SSAHPASAPVALCQRGRIKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LISASRLPRHIDNSIPAHPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...GTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS TCA 90 bp AAGTGTACAAGTGCCACACCTGCAGGGGCTGGATGCCACCAGCGATaGGGTCAGAAATCATACGCACGCTGGCCCTCTTCTTTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KCTSATPAGAGCHQR*GQKSYARWPSSLGP
Trigger: AGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGGTGTGGCACTTGTACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS TCA 90 bp TTTGAGCTCCTGAGGTCCAAGAGGCCCCCAAAGGGGCAGCTAGCCTaGGAGTGCCTTCCATACCTTGCCAGACTCTGTCATGGTATCGTG +
Preference number: 5 (lower is better)
Translates to: FELLRSKRPPKGQLA*ECLPYLARLCHGIV
Trigger: CACGATACCATGACAGAGTCTGGCAAGGTATGGAAGGCACTCTCAGGCTAGCTGCCCCTTTGGGGGCCTCTTGGACCTCAGGAGCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS TCA 90 bp GCTTTCTGGGCCTTGGCCTCCATAGTTATGAAATGGGCGCCCAACTaGGTGACAGACTGGGCATGGCTGCTGGTGAGAATGTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: AFWALASIVMKWAPN*VTDWAWLLVRMWQP
Trigger: TGGCTGCCACATTCTCACCAGCAGCCATGCCCAGTCTGTCACTCAGTTGGGCGCCCATTTCATAACTATGGAGGCCAAGGCCCAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 90 bp GGACTGGGTGTGTCCACTGCGACTCTACTGGGGGTACCAACAATCTaGTTCGGCTCTTTCACCCATCCCACCTCCAATTCTTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLGVSTATLLGVPTI*FGSFTHPTSNSCLP
Trigger: GGGCAGACAAGAATTGGAGGTGGGATGGGTGAAAGAGCCGAAGCAGATTGTTGGTACCCCCAGTAGAGTCGCAGTGGACACACCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp TGTAGGATCTGCTCCAGGGCGTTAAAGCCACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATCTCCTCTCCCACTTGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: CRICSRALKPQVMAF*AQVSCISSPTCFRT
Trigger: TGTCCTGAAGCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGCTTTAACGCCCTGGAGCAGATCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000393734.5
ENST00000553586.5
ENST00000554279.5
ENST00000554381.1
ENST00000555093.1
ENST00000556627.5
ENST00000557053.5
ENST00000557639.5
CDS CCA 90 bp TTGATGCAGTATTTTGAGTGGTGGAGCGGGCTGGGAGCTGGCATCTaGAGTCTGGACCTGGTGCAGGAACCAGCTCTGCATGACCTTGGA +
Preference number: 5 (lower is better)
Translates to: LMQYFEWWSGLGAGI*SLDLVQEPALHDLG
Trigger: TCCAAGGTCATGCAGAGCTGGTTCCTGCACCAGGTCCAGACTCCAGATGCCAGCTCCCAGCCCGCTCCACCACTCAAAATACTGCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp CACAGAGGTGAGGACTCACCGTTAAAGCCACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATCTCCTCTCCCACTTGCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: HRGEDSPLKPQVMAF*AQVSCISSPTCFRT
Trigger: TGTCCTGAAGCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGCTTTAACGGTGAGTCCTCACCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS-3UTR CAA 90 bp TCTTCAGCCCACCCAGCTTCTGCTCCTGTGGCCCTGTGCCAACGGGGCAGGATTGTCCTTAGAAAACTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: SSAHPASAPVALCQRGRIVLRKL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGAC...AATCCTGCCCCGTTGGCACAGGGCCACAGGAGCAGAAGCTGGGTGGGCTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATCGCTGGCCCTCTTCTTaGGGTCCTGAGGCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: ARHFNPHSHLSLTTAPSHRWPSS*GPEAEV
Trigger: GACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCG...ATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS-3UTR CAA 90 bp ATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGGCTTGGGGCGACGTTaGGAAGCCTTAGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ISASRLPRHIDNSIPAHPGLGRR*EALVEG
Trigger: TCCCTCCACTAAGGCTTCCAAACGTCGCCCCAAGCC...AGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS GCA 90 bp TCACAGCCAATGTGTGAGTGTAAGAGTGTGTCAGGTGTGCAAGGGTaGAAGTGTACAAGTGCCACACCTGCAGGGGCTGGATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: SQPMCECKSVSGVQG*KCTSATPAGAGCHQ
Trigger: CTGGTGGCATCCAGCCCCTGCAGGTGTGGCACTTGTACACTTGCACCCTTGCACACCTGACACACTCTTACACTCACACATTGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS GCA 90 bp TGGGCAGCTCACAGCCAATGTGTGAGTGTAAGAGTGTGTCAGGTGTaGAAGGGTGCAAGTGTACAAGTGCCACACCTGCAGGGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: WAAHSQCVSVRVCQV*KGASVQVPHLQGLD
Trigger: ATCCAGCCCCTGCAGGTGTGGCACTTGTACACTTGCACCCTTGCACACCTGACACACTCTTACACTCACACATTGGCTGTGAGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS GCA 90 bp CAGCTGCATCTCCTCTCCCACTTGCTTCAGGACAGACAGGTTCTGTaGAGCCCAAAGAAAATCTGTGATTGCGCTGACAGCTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: QLHLLSHLLQDRQVL*SPKKICDCADSWVG
Trigger: CCCCACCCAGCTGTCAGCGCAATCACAGATTTTCTTTGGGCTGCACAGAACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp TTTCCCCTGCCTGGTGCCTGTTCAAGGCCTCCAATTCCCACATTGTaGTCTGGGCACAGCCTTCTTACCTGTTGGCCCCCATCCTTTATG +
Preference number: 5 (lower is better)
Translates to: FPLPGACSRPPIPTL*SGHSLLTCWPPSFM
Trigger: CATAAAGGATGGGGGCCAACAGGTAAGAAGGCTGTGCCCAGACCACAATGTGGGAATTGGAGGCCTTGAACAGGCACCAGGCAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS-3UTR CAA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCGCTGGCCCTCTTCTTaGGGTCCTGAGGCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: PGLEFESPISSIKTLVSRRWPSS*GPEAEV
Trigger: GACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCG...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp AGCACAGATCAGCCATGGTCACCTGAAAGAGGTCCCGGTGGGTTCCCATCAGGGAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: STDQPWSPERGPGGFPSGKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...CCCTGATGGGAACCCACCGGGACCTCTTTCAGGTGACCATGGCTGATCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CAA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: KADPGLEFESPISSIKTLPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCCCAACGGGGCAGGATTaGGGAGCTAGGCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: DPGLEFESPISSIKTLVSPTGQD*GARPSA
Trigger: AGCTGAGGGCCTAGCTCCCAAATCCTGCCCCGTTGG...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GGTGTTACGGTGAGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCAAAGGGCTGCGAGAAATaGGGAGGCTTGGGGCGACGT +
Preference number: 5 (lower is better)
Translates to: GVTVSTPGILIRILISASKGCEK*GGLGRR
Trigger: ACGTCGCCCCAAGCCTCCCAATTTCTCGCAGCCCTT...TGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCTCACCGTAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS TCA 90 bp ATGAGGTCAGAAATCATACGCACGCTGGCCCTCTTCTTTGGGTCCTaGGGCAGAAGTCGCGGAGTGGGACGCATCTCCTCTAGATACTCA +
Preference number: 5 (lower is better)
Translates to: MRSEIIRTLALFFGS*GRSRGVGRISSRYS
Trigger: TGAGTATCTAGAGGAGATGCGTCCCACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTTCTGACCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216465.10
ENST00000361389.8
ENST00000393734.5
ENST00000553431.5
ENST00000553586.5
ENST00000553838.5
ENST00000554279.5
ENST00000554846.5
ENST00000555093.1
ENST00000556627.5
ENST00000557639.5
CDS TCA 90 bp AAGCCACGTGATTCTGTCAGAGATGTGCAAGAATCCCTATTCATGTaGCACAGGACGCGGCCATGGCTGTGGCAGGTGTGCCCACAACTC +
Preference number: 5 (lower is better)
Translates to: KPRDSVRDVQESLFM*HRTRPWLWQVCPQL
Trigger: GAGTTGTGGGCACACCTGCCACAGCCATGGCCGCGTCCTGTGTCACATGAATAGGGATTCTTGCACATCTCTGACAGAATCACGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS TCA 90 bp AATAGGAATAGAGGATGGGCTCCTGCTAGGGCCAAGAGAAGAGCATaGAGGGCTGCGAGAAATTGGGAGGCTTGGGGCGACGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: NRNRGWAPARAKRRA*RAARNWEAWGDVWK
Trigger: CTTCCAAACGTCGCCCCAAGCCTCCCAATTTCTCGCAGCCCTTCATGCTCTTCTCTTGGCCCTAGCAGGAGCCCATCCTCTATTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556914.5
CDS GCA 90 bp GCTGCCCCAGTGGCCTCAAAAAGCCACGTGATTCTGTCAGAGATGTaGAAGAATCCCTATTCATGTGACACAGGACGCGGCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: AAPVASKSHVILSEM*KNPYSCDTGRGHGC
Trigger: ACAGCCATGGCCGCGTCCTGTGTCACATGAATAGGGATTCTTGCACATCTCTGACAGAATCACGTGGCTTTTTGAGGCCACTGGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 90 bp ACCTCGTCTCCTACACAGTATATGCCCGCTGTGCTCTGTAGGATCTaGTCCAGGGCTGTGGGGAGGCCACATAAACATCTTATTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TSSPTQYMPAVLCRI*SRAVGRPHKHLILG
Trigger: GCCCAGAATAAGATGTTTATGTGGCCTCCCCACAGCCCTGGAGCAGATCCTACAGAGCACAGCGGGCATATACTGTGTAGGAGACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 90 bp ATCCCTGTACTACCAACTCAGTCTGCTAGATGGCAAGGGTGTAAGTaGGAACCTAGGCCCTTCCAAGATGGTTCCCAAGCCCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: IPVLPTQSARWQGCK*EPRPFQDGSQAQQS
Trigger: GGACTGCTGGGCTTGGGAACCATCTTGGAAGGGCCTAGGTTCCCACTTACACCCTTGCCATCTAGCAGACTGAGTTGGTAGTACAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp CGACTGCCCCGTCACATAGATAACAGTATTCCTGCCCACCCTGCTCCCCGCATCGTCCTTAGAAAACTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: RLPRHIDNSIPAHPAPRIVLRKL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGAC...GATGCGGGGAGCAGGGTGGGCAGGAATACTGTTATCTATGTGACGGGGCAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
CDS CCA 90 bp TACTCCCTCAAGAAGGCAACTAAGGGCCAAGGGAAGGAGCTCAGGTaGCCACACACAGCACACACAGACAGATGGCACTCTTGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: YSLKKATKGQGKELR*PHTAHTDRWHSCSV
Trigger: AACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCACCTGAGCTCCTTCCCTTGGCCCTTAGTTGCCTTCTTGAGGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCACCAGCAGCCTCTTGTaGATGGAGCTGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: FESPISSIKTLVSRPLQPTSSLL*MELMVG
Trigger: CCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGT...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGACCAGCAGCCTCTTGTaGATGGAGCTGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PGLEFESPISSIKTLVSRTSSLL*MELMVG
Trigger: CCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGT...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS TCA 90 bp ACTCATCCTGGAGGAGGCACATCTCTTACCAATTCGAACTCTCCATaGGCAGGAGCTTCGGAAATAGGAATAGAGGATGGGCTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: THPGGGTSLTNSNSP*AGASEIGIEDGLPR
Trigger: GCGGGGAAGCCCATCCTCTATTCCTATTTCCGAAGCTCCTGCTCATGGAGAGTTCGAATTGGTAAGAGATGTGCCTCCTCCAGGATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553770.1
CDS TCA 90 bp CATCTGTGCAAATCAGGGCAGACTCCAAGCTCTCTGAGAGGCTCATaGGGTCCCTTGGCTCCAAAATTATGCTGGTTTGAGCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: HLCKSGQTPSSLRGS*GPLAPKLCWFELLR
Trigger: CCTCAGGAGCTCAAACCAGCATAATTTTGGAGCCAAGGGACCTCATGAGCCTCTCAGAGAGCTTGGAGTCTGCCCTGATTTGCACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS TCA 90 bp TCTCAGGCCTGCATCTGTGCAAATCAGGGCAGACTCCAAGCTCTCTaGGAGGCTCATGAGGTCCCTTGGCTCCAAAATTATGCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SQACICANQGRLQAL*EAHEVPWLQNYAGL
Trigger: CAAACCAGCATAATTTTGGAGCCAAGGGACCTCATGAGCCTCTCAGAGAGCTTGGAGTCTGCCCTGATTTGCACAGATGCAGGCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS TCA 90 bp AGCAGCCACCTTTGCAGGCTGCCCCAGTGGCCTCAAAAAGCCACGTaGTTCTGTCAGAGATGTGCAAGAATCCCTATTCATGTGACACAG +
Preference number: 5 (lower is better)
Translates to: SSHLCRLPQWPQKAT*FCQRCARIPIHVTQ
Trigger: CTGTGTCACATGAATAGGGATTCTTGCACATCTCTGACAGAATCACGTGGCTTTTTGAGGCCACTGGGGCAGCCTGCAAAGGTGGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 90 bp TACCAAGTGACTATGGGATGGAGGAGGGGTCACGGAGGATGGCTTTaGCTCCACACTCTGGAGGCAAGCTTCTTGGGTTCAAATTTCATC +
Preference number: 5 (lower is better)
Translates to: YQVTMGWRRGHGGWL*LHTLEASFLGSNFI
Trigger: GATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTGTGGAGGCAAAGCCATCCTCCGTGACCCCTCCTCCATCCCATAGTCACTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp GGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: GLEFESPISSIKTLVSRPHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...AGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp ATTTGCCACCTGAGGCACCAAGCACAGATCAGCCATGGTCACCTGAAAGAGGTCGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: ICHLRHQAQISHGHLKEVGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...GACCTCTTTCAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS-3UTR CAA 90 bp TTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCACCAGCAGCCTCTTGTaGATGGAGCTGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: FSAGILWSHTQQKRMRKGTSSLL*MELMVG
Trigger: CCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGT...GCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CAA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCACCAGCAGCCTCTTGTaGATGGAGCTGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSTSSLL*MELMVG
Trigger: CCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGT...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS TCA 90 bp CTTCTTGGAGGAAAGTTTCTCCTGGCACCCAGTGCTCTTGCTTACTaGTCCCAGCAAATACCAAGTGACTATGGGATGGAGGAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LLGGKFLLAPSALAY*SQQIPSDYGMEEGS
Trigger: TGACCCCTCCTCCATCCCATAGTCACTTGGTATTTGCTGGGATCAGTAAGCAAGAGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 90 bp TCACCAAAGCTCCCTCTCCCCTCTGCCACCCCTAGCATATTAAGCTaGTCTCTGAACTTGCTATTGCCATCCCTGTACTACCAACTCAGT +
Preference number: 5 (lower is better)
Translates to: SPKLPLPSATPSILS*SLNLLLPSLYYQLS
Trigger: ACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGTGGCAGAGGGGAGAGGGAGCTTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GAACTTGCTATTGCCATCCCTGTACTACCAACTCAGTCTGCTAGATaGCAAGGGTGTAAGTGGGAACCTAGGCCCTTCCAAGATGGTTCC +
Preference number: 5 (lower is better)
Translates to: ELAIAIPVLPTQSAR*QGCKWEPRPFQDGS
Trigger: GGAACCATCTTGGAAGGGCCTAGGTTCCCACTTACACCCTTGCCATCTAGCAGACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GTCACGGAGGATGGCTTTGCCTCCACACTCTGGAGGCAAGCTTCTTaGGTTCAAATTTCATCACAGTCATTTGCTAACTGTGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VTEDGFASTLWRQAS*VQISSQSFANCVAL
Trigger: CAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTGTGGAGGCAAAGCCATCCTCCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp CAGGGCTGTTTACTAGAGATTCTAGACAGGCATCAGGCTCTTTGGTaGCCTCAGAGCATTTGCCGTGACTCCAGTCACCAGATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QGCLLEILDRHQALW*PQSICRDSSHQISS
Trigger: AGAGGAAATCTGGTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGAATCTCTAGTAAACAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp TCTCAGGGCTGTTTACTAGAGATTCTAGACAGGCATCAGGCTCTTTaGTGGCCTCAGAGCATTTGCCGTGACTCCAGTCACCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: SQGCLLEILDRHQAL*WPQSICRDSSHQIS
Trigger: GGAAATCTGGTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGAATCTCTAGTAAACAGCCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp CGCGGGCATTCTTTGGAGTCACACACAACAAAAGCGGATGAGAAAAGGCACACACATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: RGHSLESHTTKADEKRHTHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...TGTGTGCCTTTTCTCATCCGCTTTTGTTGTGTGTGACTCCAAAGAATGCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS-3UTR CAA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: KADPGLEFESPISSIKTLHLLSH*LQDRQV
Trigger: AACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATG...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: FESPISSIKTLVSRPLQPGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp CCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: PGLEFESPISSIKTLVSRGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...CCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp AGCACGCCAGGCATTTTAATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCTGGATCTTCCTTATTaGGAGATGCAACTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: STPGILIRILISASRLPRLDLPY*EMQLPF
Trigger: GAAAGGGAGTTGCATCTCCAAATAAGGAAGATCCAG...ACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGATTAAAATGCCTGGCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393734.5
CDS TCA 90 bp GGCTTTTGTGGAGAAAGTAAAGATGGTCCTGGCACAGAAAGCAGGTaGTGGGCAGAAAGTGTCTTTCGAAGAGGAGGAATTGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GFCGESKDGPGTESR*WAESVFRRGGIGWP
Trigger: TGGCCACCCAATTCCTCCTCTTCGAAAGACACTTTCTGCCCATCACCTGCTTTCTGTGCCAGGACCATCTTTACTTTCTCCACAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361389.8
ENST00000393734.5
ENST00000554846.5
CDS TCA 90 bp ACTCATCCTGGAGGAGGCACATCTCTTACCAATTCGAACTCTCCATaGGCAGGAGCTTCGGAAATAGGAATAGAGGATGGGCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: THPGGGTSLTNSNSP*AGASEIGIEDGLRR
Trigger: TCTCCTCAGCCCATCCTCTATTCCTATTTCCGAAGCTCCTGCTCATGGAGAGTTCGAATTGGTAAGAGATGTGCCTCCTCCAGGATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 90 bp GAGATTCTAGACAGGCATCAGGCTCTTTGGTGGCCTCAGAGCATTTaGCGTGACTCCAGTCACCAGATTTCCTCTCCATCCCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: EILDRHQALWWPQSI*RDSSHQISSPSLLI
Trigger: TATCAAAAGGGATGGAGAGGAAATCTGGTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp TTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCCCGTCCTTAGAAAACTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: FESPISSIKTLVSRPLQPVLRKL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGAC...GGGCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: DPGLEFESPISSIKTLVSGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp GATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: DPGLEFESPISSIKTLVSKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...GGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
ENST00000556627.5
ENST00000557639.5
CDS-3UTR CAA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCCAGCGCGGGCATTCTTaGGAGTCACACACAACAAAA +
Preference number: 5 (lower is better)
Translates to: KADPGLEFESPISSIKTLQRGHS*ESHTTK
Trigger: TTTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTG...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS TCA 90 bp TCTAGACAGGCATCAGGCTCTTTGGTGGCCTCAGAGCATTTGCCGTaGCTCCAGTCACCAGATTTCCTCTCCATCCCTTTTGATAATTTC +
Preference number: 5 (lower is better)
Translates to: SRQASGSLVASEHLP*LQSPDFLSIPFDNF
Trigger: GAAATTATCAAAAGGGATGGAGAGGAAATCTGGTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp TGGCCCTGGGCAAGTAACTTAATGGGCCTCTGGAGCCAGACTACCTaGTTCAAATTCCAGTTCTGCCTCTTAGTAACTGAAAGATCTTGG +
Preference number: 5 (lower is better)
Translates to: WPWASNLMGLWSQTT*FKFQFCLLVTERSW
Trigger: CCAAGATCTTTCAGTTACTAAGAGGCAGAACTGGAATTTGAACCAGGTAGTCTGGCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp CATTTGCTAACTGTGTGGCCCTGGGCAAGTAACTTAATGGGCCTCTaGAGCCAGACTACCTGGTTCAAATTCCAGTTCTGCCTCTTAGTA +
Preference number: 5 (lower is better)
Translates to: HLLTVWPWASNLMGL*SQTTWFKFQFCLLV
Trigger: TACTAAGAGGCAGAACTGGAATTTGAACCAGGTAGTCTGGCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp CTTGGGTTCAAATTTCATCACAGTCATTTGCTAACTGTGTGGCCCTaGGCAAGTAACTTAATGGGCCTCTGGAGCCAGACTACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LGFKFHHSHLLTVWP*ASNLMGLWSQTTWF
Trigger: GAACCAGGTAGTCTGGCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTTGAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GTGGCCACACACAGCACACACAGACAGATGGCACTCTTGTTCTGTTaGAGAAGAATCTCTTCCAATCTATTCTCTCTGTTCTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VATHSTHRQMALLFC*RRISSNLFSLFSGL
Trigger: CAGCCCTGAGAACAGAGAGAATAGATTGGAAGAGATTCTTCTCCAACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp CAAGGGAAGGAGCTCAGGTGGCCACACACAGCACACACAGACAGATaGCACTCTTGTTCTGTTGGAGAAGAATCTCTTCCAATCTATTCT +
Preference number: 5 (lower is better)
Translates to: QGKELRWPHTAHTDR*HSCSVGEESLPIYS
Trigger: AGAATAGATTGGAAGAGATTCTTCTCCAACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCACCTGAGCTCCTTCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp AGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTTTCCAGGCCTCTTCAGCGTCCTTAGAAAACTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: SSSLPSPQLRLSFPGLFSVLRKL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGAC...GCTGAAGAGGCCTGGAAACGAGAGTCTTAATTGAGGAGATGGGAGACTCGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CAA 90 bp AAGGCAGATCCAGGGCTAGAGTTCGAGTCTCCCATCTCCTCAATTAAGACTCTCGTCCTTAGAAAACTGTaGGCCCCCATCCTTTATGAG +
Preference number: 5 (lower is better)
Translates to: KADPGLEFESPISSIKTLVLRKL*APILYE
Trigger: CTCATAAAGGATGGGGGCCAACAGTTTTCTAAGGAC...GAGAGTCTTAATTGAGGAGATGGGAGACTCGAACTCTAGCCCTGGATCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000393734.5
ENST00000553586.5
ENST00000557639.5
CDS-3UTR CAA 90 bp ATCCGCATTCTCATCTCAGCCTCACGACTGCCCCGTCACATAGATAACAGTATTGGGGTGAGATCCACCTaGAATCTTTCAGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: IRILISASRLPRHIDNSIGVRST*NLSAFA
Trigger: GGCAAATGCTGAAAGATTCAAGGTGGATCTCACCCC...AATACTGTTATCTATGTGACGGGGCAGTCGTGAGGCTGAGATGAGAATGCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216465.10
ENST00000393734.5
ENST00000553586.5
ENST00000554381.1
CDS TCA 90 bp TCGGGAGCCAGCATTTCAAAGTGGAACCCAGGAAAGACTCGCCAGTaGTTAGCACTCATGAATCTTCCCACCAAAACATGTGTATCCCTA +
Preference number: 5 (lower is better)
Translates to: SGASISKWNPGKTRQ*LALMNLPTKTCVSL
Trigger: TAGGGATACACATGTTTTGGTGGGAAGATTCATGAGTGCTAATCACTGGCGAGTCTTTCCTGGGTTCCACTTTGAAATGCTGGCTCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 90 bp AAAAACTTGGGTGGGTCAACACTAGTGGAGAAGACTGCGTGCGTGTaGATGCATGTGTGTATTACACACACTTGGGCATTCAAGTATGGT +
Preference number: 5 (lower is better)
Translates to: KNLGGSTLVEKTACV*MHVCITHTWAFKYG
Trigger: ACCATACTTGAATGCCCAAGTGTGTGTAATACACACATGCATGCACACGCACGCAGTCTTCTCCACTAGTGTTGACCCACCCAAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 90 bp GACAGTAATAATAGTACCTCCCTCCTAGGGTTGCTGAGGTTTAAATaGAATCAGGCACACAAAAGCACTCAGCACAGAGCTTTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: DSNNSTSLLGLLRFK*NQAHKSTQHRAFPQ
Trigger: CTGAGGAAAAGCTCTGTGCTGAGTGCTTTTGTGTGCCTGATTCCATTTAAACCTCAGCAACCCTAGGAGGGAGGTACTATTATTACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS-3UTR CAA 90 bp TTTAATTCACGCCAAATTTCAGCGCGGGCATTCTTTGGAGTCACACACAACAAAAAGACCAGCAGCCTCTaGTTGATGGAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: FNSRQISARAFFGVTHNKKTSSL*LMELMV
Trigger: TACCATCAGCTCCATCAACAAGAGGCTGCTGGTCTT...TTTGTTGTGTGTGACTCCAAAGAATGCCCGCGCTGAAATTTGGCGTGAATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216465.10
ENST00000393734.5
CDS GCA 90 bp GCTTCTGCTCAGCTCAAGCCCTATAAGCCTTTTTGGACCTTATCATaGAGAACTTGGTTCTCCATGTGCTTGAATCTTCCCTTATTTTCC +
Preference number: 5 (lower is better)
Translates to: ASAQLKPYKPFWTLS*RTWFSMCLNLPLFS
Trigger: GGAAAATAAGGGAAGATTCAAGCACATGGAGAACCAAGTTCTGCATGATAAGGTCCAAAAAGGCTTATAGGGCTTGAGCTGAGCAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553838.5
ENST00000555093.1
CDS GCA 90 bp TGTGTATCCCTATGGATAGGGGAGAACTTGAAAGAACTTCTCAGATaGCCTGTTTACTACCCCTCTGACTATAGACATTTCACCAAAGCT +
Preference number: 5 (lower is better)
Translates to: CVSLWIGENLKELLR*PVYYPSDYRHFTKA
Trigger: AGCTTTGGTGAAATGTCTATAGTCAGAGGGGTAGTAAACAGGGCATCTGAGAAGTTCTTTCAAGTTCTCCCCTATCCATAGGGATACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp GCAGAAGTGAAGCGCGACCGGACAGCGACTCCACCCTaGTACGCACTCCCTACCAGGACCGCCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: AEVKRDRTATPP*YALPTRTASSG
Trigger: GCCAGAGGAGGCGGTCCTGGTAGGGAGTGCGTAGCAGGGTGGAGTCGCTGTCCGGTCGCGCTTCACTTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393734.5
ENST00000554846.5
CDS CCA 72 bp ACAGGGACTGCTGGTGACCACTTCCCCGCCTGCATCTaGCACTTCGCGCGACCCCCTCCTCCAGGCCGAGAA +
Preference number: 6 (lower is better)
Translates to: TGTAGDHFPACI*HFARPPPPGRE
Trigger: TTCTCGGCCTGGAGGAGGGGGTCGCGCGAAGTGCCAGATGCAGGCGGGGAAGTGGTCACCAGCAGTCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361389.8
CDS CCA 72 bp GCTCCTACCCTAGTCAGCCATCCAGAGGGCCCAGTATaGGGTGGGGACCCACTAGCCACCCACCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: APTLVSHPEGPV*GGDPLATHPPR
Trigger: CCTGGGAGGGTGGGTGGCTAGTGGGTCCCCACCCCATACTGGGCCCTCTGGATGGCTGACTAGGGTAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS CAA 90 bp CCCCCAGGCTCCATGAGCCCCTTCCTTCAACCAAGGGCCCTGAGGTaGGAGGGAGGTAGCCATCCCAGCAGCCACCTTTGCAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PPGSMSPFLQPRALR*EGGSHPSSHLCRLP
Trigger: GGGCAGCCTGCAAAGGTGGCTGCTGGGATGGCTACCTCCCTCCAACCTCAGGGCCCTTGGTTGAAGGAAGGGGCTCATGGAGCCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp GCCTGGGAGGCTGGTTCAGATACCCAGGCCCCTGTGTaGGAGGGCCATACCTCTAAGAGGCCACTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: AWEAGSDTQAPV*EGHTSKRPLWG
Trigger: GCCCCACAGTGGCCTCTTAGAGGTATGGCCCTCGCACACAGGGGCCTGGGTATCTGAACCAGCCTCCCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CCA 72 bp TACCCTAGTCAGCCATCCAGAGGGCCCAGTATGGGGTaGGGACCCACTAGCCACCCACCCTCCCAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: YPSQPSRGPSMG*GPTSHPPSQGQ
Trigger: CTGACCCTGGGAGGGTGGGTGGCTAGTGGGTCCCCACCCCATACTGGGCCCTCTGGATGGCTGACTAGGGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS GCA 72 bp CGAGGAAGAGATGTCAGGCGCTCTCATTCAGGGCACTaGTCTCATGAGGGCCCTCCCCCAGGCCCTGCACTC +
Preference number: 6 (lower is better)
Translates to: RGRDVRRSHSGH*SHEGPPPGPAL
Trigger: GAGTGCAGGGCCTGGGGGAGGGCCCTCATGAGAGCAGTGCCCTGAATGAGAGCGCCTGACATCTCTTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553838.5
ENST00000555093.1
ENST00000556914.5
CDS CCA 72 bp CCATGCAACTGTCAGGCCCAAAGCAGCCTGGGAGGCTaGTTCAGATACCCAGGCCCCTGTGTGCGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: PCNCQAQSSLGG*FRYPGPCVRGP
Trigger: TGGCCCTCGCACACAGGGGCCTGGGTATCTGAACCAGCCTCCCAGGCTGCTTTGGGCCTGACAGTTGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CAA 90 bp GTGAGGTCCTCTCTGACAGAGCAACCCTTCCATCCCAGGCCAGCTTaGCACCCGGGCTTATCCGCCCCAGTCCACCCCACTCCAGCACTC +
Preference number: 6 (lower is better)
Translates to: VRSSLTEQPFHPRPA*HPGLSAPVHPTPAL
Trigger: GAGTGCTGGAGTGGGGTGGACTGGGGCGGATAAGCCCGGGTGCAAAGCTGGCCTGGGATGGAAGGGTTGCTCTGTCAGAGAGGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553770.1
ENST00000555093.1
CDS TCA 72 bp CTTCGCGCCTGGGACCTGCCGACGACTAAGGCTCAGTaGGACTCGACGAATCAGGCCCGTGTCTTTCGTCCG +
Preference number: 6 (lower is better)
Translates to: LRAWDLPTTKAQ*DSTNQARVFRP
Trigger: CGGACGAAAGACACGGGCCTGATTCGTCGAGTCTCACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000553431.5
ENST00000553770.1
ENST00000553838.5
ENST00000554279.5
ENST00000556627.5
ENST00000557639.5
CDS GCA 72 bp CCCTCCTCCAGGCCGAGAAACTTCGCGCCTGGGACCTaGCGACGACTAAGGCTCAGTGAGACTCGACGAATC +
Preference number: 6 (lower is better)
Translates to: PSSRPRNFAPGT*RRLRLSETRRI
Trigger: GATTCGTCGAGTCTCACTGAGCCTTAGTCGTCGGCAGGTCCCAGGCGCGAAGTTTCTCGGCCTGGAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000553431.5
ENST00000553770.1
ENST00000553838.5
ENST00000554279.5
ENST00000556627.5
ENST00000557053.5
ENST00000557639.5
CDS CCA 72 bp CAGGCCCGTGTCTTTCGTCCGGGTAAAGCGAGGGGCTaGACTAGAAAGATCCTTCCGGTCGCCTCTGGCTCG +
Preference number: 6 (lower is better)
Translates to: QARVFRPGKARG*TRKILPVASGS
Trigger: CGAGCCAGAGGCGACCGGAAGGATCTTTCTAGTCCAGCCCCTCGCTTTACCCGGACGAAAGACACGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361389.8
ENST00000553838.5
CDS CCA 72 bp AGTGGTGGAGCGGGCTGGGAGCTGGCATCTGGAGTCTaGACCTGGTGCAGGAACCAGCTCTGCATGACCTTG +
Preference number: 6 (lower is better)
Translates to: SGGAGWELASGV*TWCRNQLCMTL
Trigger: CAAGGTCATGCAGAGCTGGTTCCTGCACCAGGTCCAGACTCCAGATGCCAGCTCCCAGCCCGCTCCACCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp AGGCCGTACAGACAGCACCTATATTGCTCCGGCTTCTaGCTCAGCCAGGGCAGAGGTACTGGCGCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: RPYRQHLYCSGF*LSQGRGTGAQG
Trigger: TCCCTGGGCGCCAGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GCCCTCATCCATGCAACTGTCAGGCCCAAAGCAGCCTaGGAGGCTGGTTCAGATACCCAGGCCCCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: ALIHATVRPKAA*EAGSDTQAPVC
Trigger: GCACACAGGGGCCTGGGTATCTGAACCAGCCTCCCAGGCTGCTTTGGGCCTGACAGTTGCATGGATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CCA 72 bp GCCACTGGCCACGGTGACAGCTCTCACTCTGATGGCTaGCGCTGTGCTGGCCTTGGTTTCCCAGCTGGAGTA +
Preference number: 6 (lower is better)
Translates to: ATGHGDSSHSDG*RCAGLGFPAGV
Trigger: TACTCCAGCTGGGAAACCAAGGCCAGCACAGCGCCAGCCATCAGAGTGAGAGCTGTCACCGTGGCCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CAA 72 bp TCTCTGACAGAGCAACCCTTCCATCCCAGGCCAGCTTaGCACCCGGGCTTATCCGCCCCAGTCCACCCCACT +
Preference number: 6 (lower is better)
Translates to: SLTEQPFHPRPA*HPGLSAPVHPT
Trigger: AGTGGGGTGGACTGGGGCGGATAAGCCCGGGTGCAAAGCTGGCCTGGGATGGAAGGGTTGCTCTGTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553770.1
ENST00000555093.1
CDS CAA 90 bp AGTGATGGCGTTCTGGGCCCAGGTCAGCTGCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTTCTGCAGGGGCTGGATGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SDGVLGPGQLHLLSH*LQDRQVLQGLDATS
Trigger: GCTGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216465.10
ENST00000361389.8
ENST00000393734.5
ENST00000553431.5
ENST00000553586.5
ENST00000554279.5
ENST00000554381.1
ENST00000555093.1
ENST00000556627.5
ENST00000557639.5
CDS CAA 90 bp AGGAGGGAAGGCCAAAGCACACAGGCCGTACAGACAGCACCTATATaGCTCCGGCTTCTGGCTCAGCCAGGGCAGAGGTACTGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: RREGQSTQAVQTAPI*LRLLAQPGQRYWRP
Trigger: TGGGCGCCAGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCTGTGTGCTTTGGCCTTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp GCGGGCTGGGAGCTGGCATCTGGAGTCTGGACCTGGTaGAGGAACCAGCTCTGCATGACCTTGGACAAACCT +
Preference number: 6 (lower is better)
Translates to: AGWELASGVWTW*RNQLCMTLDKP
Trigger: AGGTTTGTCCAAGGTCATGCAGAGCTGGTTCCTGCACCAGGTCCAGACTCCAGATGCCAGCTCCCAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GGAGCGGGCTGGGAGCTGGCATCTGGAGTCTGGACCTaGTGCAGGAACCAGCTCTGCATGACCTTGGACAAA +
Preference number: 6 (lower is better)
Translates to: GAGWELASGVWT*CRNQLCMTLDK
Trigger: TTTGTCCAAGGTCATGCAGAGCTGGTTCCTGCACCAGGTCCAGACTCCAGATGCCAGCTCCCAGCCCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GGCTCCGCACAGACAATCACCATTTCCCCACTCGAGTaGACAAGCCCTGCCACTGGCCACGGTGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: GSAQTITISPLE*TSPATGHGDSS
Trigger: AGAGCTGTCACCGTGGCCAGTGGCAGGGCTTGTCCACTCGAGTGGGGAAATGGTGATTGTCTGTGCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS TCA 72 bp GTCGCGGAGTGGGACGCATCTCCTCTAGATACTCAATaGTGGCCAGCTGTCCAGAGGGGAGCAGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: VAEWDASPLDTQ*WPAVQRGAVRQ
Trigger: CTGCCTCACTGCTCCCCTCTGGACAGCTGGCCATCATTGAGTATCTAGAGGAGATGCGTCCCACTCCGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553838.5
ENST00000555093.1
CDS TCA 72 bp AGTGCCACACCTGCAGGGGCTGGATGCCACCAGCGATaGGGTCAGAAATCATACGCACGCTGGCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SATPAGAGCHQR*GQKSYARWPSS
Trigger: AGAAGAGGGCCAGCGTGCGTATGATTTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGGTGTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS TCA 72 bp GCTGAAGTGCCCTCCCAGGCCATGCTCCAGTTGCCCTaGCAACCAACTCTGTGGGTTGAGAGGGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: AEVPSQAMLQLP*QPTLWVERARE
Trigger: TTCTCTGGCCCTCTCAACCCACAGAGTTGGTTGTCAGGGCAACTGGAGCATGGCCTGGGAGGGCACTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp TTCGCCAAACCCCCTCAGGGAAGTTCACTTCCCATCTaGCCCTGGCTGGATGTCTATCCCTTCTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: FAKPPQGSSLPI*PWLDVYPFSPR
Trigger: CCTGGGGGAGAAGGGATAGACATCCAGCCAGGGGCAGATGGGAAGTGAACTTCCCTGAGGGGGTTTGGCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp TGCTCCAGGGCGTTAAAGCCACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATCTCCTCTCCCACTTGC +
Preference number: 6 (lower is better)
Translates to: CSRALKPQVMAF*AQVSCISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGCTTTAACGCCCTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000393734.5
ENST00000553586.5
ENST00000554279.5
ENST00000554381.1
ENST00000555093.1
ENST00000556627.5
ENST00000557053.5
ENST00000557639.5
CDS CCA 72 bp CCATCAGGGTGCATACCCCAGAGTCAGTGGCTGGACTaGGTGTGTCCACTGCGACTCTCGTCTCCTACACAG +
Preference number: 6 (lower is better)
Translates to: PSGCIPQSQWLD*VCPLRLSSPTQ
Trigger: CTGTGTAGGAGACGAGAGTCGCAGTGGACACACCCAGTCCAGCCACTGACTCTGGGGTATGCACCCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS CCA 72 bp AGACGGTTTAGTGGGAGTGAGCTGAGGAGTGCCCCATaGCACAGAGATCCCCCTGCAGACGCCTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RRFSGSELRSAP*HRDPPADAFSG
Trigger: TCCTGAGAAGGCGTCTGCAGGGGGATCTCTGTGCCATGGGGCACTCCTCAGCTCACTCCCACTAAACCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp CCATCAGGGTGCATACCCCAGAGTCAGTGGCTGGACTaGGTGTGTCCACTGCGACTCTACTGGGGGTACCAA +
Preference number: 6 (lower is better)
Translates to: PSGCIPQSQWLD*VCPLRLYWGYQ
Trigger: TTGGTACCCCCAGTAGAGTCGCAGTGGACACACCCAGTCCAGCCACTGACTCTGGGGTATGCACCCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CAA 72 bp GGCCAAAGCACACAGGCCGTACAGACAGCACCTATATaGCTCCGGCTTCTGGCTCAGCCAGGGCAGAGGTAC +
Preference number: 6 (lower is better)
Translates to: GQSTQAVQTAPI*LRLLAQPGQRY
Trigger: GTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCTGTGTGCTTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp GAAATCATACGCACGCTGGCCCTCTTCTTTGGGTCCTaGGGCAGAAGTCGCGGAGTGGGACGCATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: EIIRTLALFFGS*GRSRGVGRISS
Trigger: AGAGGAGATGCGTCCCACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216465.10
ENST00000361389.8
ENST00000393734.5
ENST00000553431.5
ENST00000553586.5
ENST00000553838.5
ENST00000554279.5
ENST00000554846.5
ENST00000555093.1
ENST00000556627.5
ENST00000557639.5
CDS TCA 72 bp CTGAGGTCCAAGAGGCCCCCAAAGGGGCAGCTAGCCTaGGAGTGCCTTCCATACCTTGCCAGACTCTGTCAT +
Preference number: 6 (lower is better)
Translates to: LRSKRPPKGQLA*ECLPYLARLCH
Trigger: ATGACAGAGTCTGGCAAGGTATGGAAGGCACTCTCAGGCTAGCTGCCCCTTTGGGGGCCTCTTGGACCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS TCA 72 bp TGGGGAAGCTGGGCTACCCAGGCATTGGGGGAACTTTaGCTCTGGTCAGAAAGGGCATTTCTGGCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: WGSWATQALGEL*LWSERAFLARH
Trigger: GTGCCTGGCCAGAAATGCCCTTTCTGACCAGAGTCAAAGTTCCCCCAATGCCTGGGTAGCCCAGCTTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp AGGTGTGCAAGGGTGCAAGTGTACAAGTGCCACACCTaGAGGGGCTGGATGCCACCAGCGATGAGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: RCARVQVYKCHT*RGWMPPAMRSE
Trigger: TTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGGTGTGGCACTTGTACACTTGCACCCTTGCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS GCA 72 bp GCCAAAGCACACAGGCCGTACAGACAGCACCTATATTaGTCCGGCTTCTGGCTCAGCCAGGGCAGAGGTACT +
Preference number: 6 (lower is better)
Translates to: AKAHRPYRQHLY*SGFWLSQGRGT
Trigger: AGTACCTCTGCCCTGGCTGAGCCAGAAGCCGGAGCAATATAGGTGCTGTCTGTACGGCCTGTGTGCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp CCTTGTCACCACGTGCTCCCTACCCCAGATGCACGATaGTCTGCCTCACTCACCCCTGAACTCTTAGAGACC +
Preference number: 6 (lower is better)
Translates to: PCHHVLPTPDAR*SASLTPELLET
Trigger: GGTCTCTAAGAGTTCAGGGGTGAGTGAGGCAGAGCATCGTGCATCTGGGGTAGGGAGCACGTGGTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GAGGTCAGAAATCATACGCACGCTGGCCCTCTTCTTTaGGTCCTGAGGCAGAAGTCGCGGAGTGGGACGCAT +
Preference number: 6 (lower is better)
Translates to: EVRNHTHAGPLL*VLRQKSRSGTH
Trigger: ATGCGTCCCACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCGTGCGTATGATTTCTGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216465.10
ENST00000361389.8
ENST00000393734.5
ENST00000553431.5
ENST00000553586.5
ENST00000553838.5
ENST00000554279.5
ENST00000554846.5
ENST00000555093.1
ENST00000556627.5
ENST00000557639.5
CDS CCA 72 bp GAGCGTGGCCTGGTTTTGATGCAGTATTTTGAGTGGTaGAGCGGGCTGGGAGCTGGCATCTGGAGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: ERGLVLMQYFEW*SGLGAGIWSLD
Trigger: GTCCAGACTCCAGATGCCAGCTCCCAGCCCGCTCCACCACTCAAAATACTGCATCAAAACCAGGCCACGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp TGGCTCAGCCAGGGCAGAGGTACTGGCGCCCAGGGATaGGTTCATCTTCTTGGAGGAAAGTTTCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: WLSQGRGTGAQG*VHLLGGKFLLA
Trigger: TGCCAGGAGAAACTTTCCTCCAAGAAGATGAACCCATCCCTGGGCGCCAGTACCTCTGCCCTGGCTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GAGGACTCACCGTTAAAGCCACAAGTGATGGCGTTCTaGGCCCAGGTCAGCTGCATCTCCTCTCCCACTTGC +
Preference number: 6 (lower is better)
Translates to: EDSPLKPQVMAF*AQVSCISSPTC
Trigger: GCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGCTTTAACGGTGAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS CCA 72 bp GAGGTCCACAAGACCGGCTTCCAGAGATTTCCAGCCTaGCTCCATCTTGGCACCCCTGGAGCCATTTTCCCT +
Preference number: 6 (lower is better)
Translates to: EVHKTGFQRFPA*LHLGTPGAIFP
Trigger: AGGGAAAATGGCTCCAGGGGTGCCAAGATGGAGCCAGGCTGGAAATCTCTGGAAGCCGGTCTTGTGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp CCAGGGCTGTGGGGAGGCCACATAAACATCTTATTCTaGGCGCAGGGAGGGGACACAAAGCTTTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PGLWGGHINILF*AQGGDTKLSGP
Trigger: AGGCCCAGAAAGCTTTGTGTCCCCTCCCTGCGCCCAGAATAAGATGTTTATGTGGCCTCCCCACAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp CAGTGGCTGGACTGGGTGTGTCCACTGCGACTCTACTaGGGGTACCAACAATCTGCTTCGGCTCTTTCACCC +
Preference number: 6 (lower is better)
Translates to: QWLDWVCPLRLY*GYQQSASALSP
Trigger: GGGTGAAAGAGCCGAAGCAGATTGTTGGTACCCCCAGTAGAGTCGCAGTGGACACACCCAGTCCAGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CAA 72 bp GAGAAGAGCATGAAGGGCTGCGAGAAATTGGGAGGCTaGGGGCGACGTTTGGAAGCCTTAGTGGAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: EKSMKGCEKLGG*GRRLEALVEGG
Trigger: CCCTCCCTCCACTAAGGCTTCCAAACGTCGCCCCAAGCCTCCCAATTTCTCGCAGCCCTTCATGCTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393734.5
ENST00000554846.5
ENST00000556914.5
CDS CAA 72 bp GTGGAGAGCCTGGGCAATACCAGGCTCCTCCTAGTGTaGGTCAGCTCCAGTCTGGGGAGTGACAGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: VESLGNTRLLLV*VSSSLGSDSVW
Trigger: CCAAACACTGTCACTCCCCAGACTGGAGCTGACCAACACTAGGAGGAGCCTGGTATTGCCCAGGCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp GATCAGCCATGGTCACCTCGTCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGATCTGCTCCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: DQPWSPRLLHSI*PLCSVGSAPGR
Trigger: ACGCCCTGGAGCAGATCCTACAGAGCACAGCGGGCATATACTGTGTAGGAGACGAGGTGACCATGGCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000393734.5
ENST00000553586.5
ENST00000554279.5
ENST00000555093.1
ENST00000556627.5
ENST00000557053.5
ENST00000557639.5
CDS GCA 72 bp TCCAGCTTGGGAGGAGTCAACCATTTCTTCCTGTCCTaGCAGGCCTCCTCTCTCAGGCCTGCATCTGTGCAA +
Preference number: 6 (lower is better)
Translates to: SSLGGVNHFFLS*QASSLRPASVQ
Trigger: TTGCACAGATGCAGGCCTGAGAGAGGAGGCCTGGCAGGACAGGAAGAAATGGTTGACTCCTCCCAAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS GCA 72 bp TGTGTCCACTGCGACTCTCGTCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGATCTGCTCCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: CVHCDSRLLHSI*PLCSVGSAPGR
Trigger: ACGCCCTGGAGCAGATCCTACAGAGCACAGCGGGCATATACTGTGTAGGAGACGAGAGTCGCAGTGGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554381.1
CDS GCA 72 bp CCCACAACTCGAGGCCTGTCTCCCTCACTTCTCCCTTaGATGGTCCCTTGTGAGGAGAGGGAGTGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: PTTRGLSPSLLP*MVPCEERECER
Trigger: TCTTTCACACTCCCTCTCCTCACAAGGGACCATGCAAGGGAGAAGTGAGGGAGACAGGCCTCGAGTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp GGCAGCCAGGTCTCGAGAGAGCTGTTAGGGATGAGCTaGTGTTTCCTGAGGCTCCGCACAGACAATCACCAT +
Preference number: 6 (lower is better)
Translates to: GSQVSRELLGMS*CFLRLRTDNHH
Trigger: ATGGTGATTGTCTGTGCGGAGCCTCAGGAAACAGCAGCTCATCCCTAACAGCTCTCTCGAGACCTGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp TCTGGGGACAGCTTACCTCGTCTCCTACACAGTATATaGCCGCTGTGCTCTGTAGGATCTGCTCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SGDSLPRLLHSI*PLCSVGSAPGL
Trigger: CAGCCCTGGAGCAGATCCTACAGAGCACAGCGGGCATATACTGTGTAGGAGACGAGGTAAGCTGTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp AGGGTGCAAGTGTACAAGTGCCACACCTGCAGGGGCTaGATGCCACCAGCGATGAGGTCAGAAATCATACGC +
Preference number: 6 (lower is better)
Translates to: RVQVYKCHTCRG*MPPAMRSEIIR
Trigger: GCGTATGATTTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGGTGTGGCACTTGTACACTTGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS CCA 72 bp ACAGAGCGTGGCCTGGTTTTGATGCAGTATTTTGAGTaGTGGAGCGGGCTGGGAGCTGGCATCTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: TERGLVLMQYFE*WSGLGAGIWSL
Trigger: CAGACTCCAGATGCCAGCTCCCAGCCCGCTCCACCACTCAAAATACTGCATCAAAACCAGGCCACGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp CAGAGGTACTGGCGCCCAGGGATGGGTTCATCTTCTTaGAGGAAAGTTTCTCCTGGCACCCAGTGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: QRYWRPGMGSSS*RKVSPGTQCSC
Trigger: GCAAGAGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAAGATGAACCCATCCCTGGGCGCCAGTACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp CTTATTCTGGGCGCAGGGAGGGGACACAAAGCTTTCTaGGCCTTGGCCTCCATAGTTATGAAATGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: LILGAGRGHKAF*ALASIVMKWAP
Trigger: GGGCGCCCATTTCATAACTATGGAGGCCAAGGCCCAGAAAGCTTTGTGTCCCCTCCCTGCGCCCAGAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CAA 72 bp ATGGGGAAGCTGGGCTACCCAGGCATTGGGGGAACTTaGACTCTGGTCAGAAAGGGCATTTCTGGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: MGKLGYPGIGGT*TLVRKGISGQA
Trigger: TGCCTGGCCAGAAATGCCCTTTCTGACCAGAGTCAAAGTTCCCCCAATGCCTGGGTAGCCCAGCTTCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp GCAGAGGTACTGGCGCCCAGGGATGGGTTCATCTTCTaGGAGGAAAGTTTCTCCTGGCACCCAGTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: AEVLAPRDGFIF*EESFSWHPVLL
Trigger: CAAGAGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAAGATGAACCCATCCCTGGGCGCCAGTACCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp ACCTCTAAGAGGCCACTGTGGGGCAGCTCACAGAGGTaGGGACTCACCGTTAAAGCCACAAGTGATGGCGTT +
Preference number: 6 (lower is better)
Translates to: TSKRPLWGSSQR*GLTVKATSDGV
Trigger: AACGCCATCACTTGTGGCTTTAACGGTGAGTCCTCACCTCTGTGAGCTGCCCCACAGTGGCCTCTTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553431.5
ENST00000555208.1
CDS TCA 72 bp CATGCTCCAGTTGCCCTGACAACCAACTCTGTGGGTTaGGAGGGCCAGAGAAGATGGATTGCCTTGACTGCG +
Preference number: 6 (lower is better)
Translates to: HAPVALTTNSVG*EGQRRWIALTA
Trigger: CGCAGTCAAGGCAATCCATCTTCTCTGGCCCTCTCAACCCACAGAGTTGGTTGTCAGGGCAACTGGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp AAAGGGGCAGCTAGCCTGAGAGTGCCTTCCATACCTTaGCAGACTCTGTCATGGTATCGTGGTGACCCTCAG +
Preference number: 6 (lower is better)
Translates to: KGAASLRVPSIP*QTLSWYRGDPQ
Trigger: CTGAGGGTCACCACGATACCATGACAGAGTCTGGCAAGGTATGGAAGGCACTCTCAGGCTAGCTGCCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS CCA 72 bp CCCACATTGTGGTCTGGGCACAGCCTTCTTACCTGTTaGCCCCCATCCTTTATGAGATTGATGGGCACCGTC +
Preference number: 6 (lower is better)
Translates to: PTLWSGHSLLTC*PPSFMRLMGTV
Trigger: GACGGTGCCCATCAATCTCATAAAGGATGGGGGCCAACAGGTAAGAAGGCTGTGCCCAGACCACAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS CCA 72 bp AAGAAGGCAACTAAGGGCCAAGGGAAGGAGCTCAGGTaGCCACACACAGCACACACAGACAGATGGCACTCT +
Preference number: 6 (lower is better)
Translates to: KKATKGQGKELR*PHTAHTDRWHS
Trigger: AGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCACCTGAGCTCCTTCCCTTGGCCCTTAGTTGCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp GCCTCCAATTCCCACATTGTGGTCTGGGCACAGCCTTCTTACCTGTaGGCCCCCATCCTTTATGAGATTGATGGGCACCGTCTCGTAGTC +
Preference number: 6 (lower is better)
Translates to: ASNSHIVVWAQPSYL*APILYEIDGHRLVV
Trigger: GACTACGAGACGGTGCCCATCAATCTCATAAAGGATGGGGGCCAACAGGTAAGAAGGCTGTGCCCAGACCACAATGTGGGAATTGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS CAA 90 bp AGTGATGGCGTTCTGGGCCCAGGTCAGCTGCATCTCCTCTCCCACTaGCTTCAGGACAGACAGGTTCTGTGCAGCCCAAAGAAAATCTGT +
Preference number: 6 (lower is better)
Translates to: SDGVLGPGQLHLLSH*LQDRQVLCSPKKIC
Trigger: ACAGATTTTCTTTGGGCTGCACAGAACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAGATGCAGCTGACCTGGGCCCAGAACGCCATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS TCA 72 bp TATGGTGATGGCCAATCTCAGGGAAGGGCAAAGGAATaGGGGGAGGAGGACCAGACATGTCATGGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: YGDGQSQGRAKE*GEEDQTCHGVE
Trigger: CTCCACACCATGACATGTCTGGTCCTCCTCCCCTCATTCCTTTGCCCTTCCCTGAGATTGGCCATCACCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp GATTCTGTCAGAGATGTGCAAGAATCCCTATTCATGTaGCACAGGACGCGGCCATGGCTGTGGCAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: DSVRDVQESLFM*HRTRPWLWQVC
Trigger: GCACACCTGCCACAGCCATGGCCGCGTCCTGTGTCACATGAATAGGGATTCTTGCACATCTCTGACAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp GTGTCCACTGCGACTCTACTGGGGGTACCAACAATCTaGTTCGGCTCTTTCACCCATCCCACCTCCAATTCT +
Preference number: 6 (lower is better)
Translates to: VSTATLLGVPTI*FGSFTHPTSNS
Trigger: AGAATTGGAGGTGGGATGGGTGAAAGAGCCGAAGCAGATTGTTGGTACCCCCAGTAGAGTCGCAGTGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp ATTCTGAGATTGCGATCTTCACCCCCTTCTTTCACATaGTCCAGGTCAGAGGCCCTGAGAATCCCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: ILRLRSSPPSFT*SRSEALRIPLP
Trigger: AGGGAGGGGGATTCTCAGGGCCTCTGACCTGGACCATGTGAAAGAAGGGGGTGAAGATCGCAATCTCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS CCA 72 bp CTGAGAGTGCCTTCCATACCTTGCCAGACTCTGTCATaGTATCGTGGTGACCCTCAGCCTCCCAGGAAATGT +
Preference number: 6 (lower is better)
Translates to: LRVPSIPCQTLS*YRGDPQPPRKC
Trigger: ACATTTCCTGGGAGGCTGAGGGTCACCACGATACCATGACAGAGTCTGGCAAGGTATGGAAGGCACTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS CCA 72 bp CTACCAACTCAGTCTGCTAGATGGCAAGGGTGTAAGTaGGAACCTAGGCCCTTCCAAGATGGTTCCCAAGCC +
Preference number: 6 (lower is better)
Translates to: LPTQSARWQGCK*EPRPFQDGSQA
Trigger: GGCTTGGGAACCATCTTGGAAGGGCCTAGGTTCCCACTTACACCCTTGCCATCTAGCAGACTGAGTTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GGAGGGGTCACGGAGGATGGCTTTGCCTCCACACTCTaGAGGCAAGCTTCTTGGGTTCAAATTTCATCACAG +
Preference number: 6 (lower is better)
Translates to: GGVTEDGFASTL*RQASWVQISSQ
Trigger: CTGTGATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTGTGGAGGCAAAGCCATCCTCCGTGACCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GCTTCTCTAACACTTCTGGGTGGTCAAGGCTCACCGTaGCACTATCCCCTTCTCTCAGCTTTCCTTGTCACC +
Preference number: 6 (lower is better)
Translates to: ASLTLLGGQGSP*HYPLLSAFLVT
Trigger: GGTGACAAGGAAAGCTGAGAGAAGGGGATAGTGCCACGGTGAGCCTTGACCACCCAGAAGTGTTAGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp TCCCACATTGTGGTCTGGGCACAGCCTTCTTACCTGTaGGCCCCCATCCTTTATGAGATTGATGGGCACCGT +
Preference number: 6 (lower is better)
Translates to: SHIVVWAQPSYL*APILYEIDGHR
Trigger: ACGGTGCCCATCAATCTCATAAAGGATGGGGGCCAACAGGTAAGAAGGCTGTGCCCAGACCACAATGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553268.5
CDS CAA 90 bp CTCCCCACGAGTCTTGTATTGAGCCTCTCCTATGTGCTAGGCACCTaGACTGTACACAGGCGAGGAAGAGATGTCAGGCGCTCTCATTCA +
Preference number: 6 (lower is better)
Translates to: LPTSLVLSLSYVLGT*TVHRRGRDVRRSHS
Trigger: TGAATGAGAGCGCCTGACATCTCTTCCTCGCCTGTGTACAGTCAAGGTGCCTAGCACATAGGAGAGGCTCAATACAAGACTCGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553838.5
ENST00000555093.1
ENST00000556914.5
CDS TCA 72 bp GTGAGATCCACCTTGAATCTTTCAGCATTTGCCACCTaGGGCACCAAGCACAGATCAGCCATGGTCACCTCG +
Preference number: 6 (lower is better)
Translates to: VRSTLNLSAFAT*GTKHRSAMVTS
Trigger: CGAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTGAAAGATTCAAGGTGGATCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216465.10
ENST00000349555.7
ENST00000361389.8
ENST00000393734.5
ENST00000553586.5
ENST00000554279.5
ENST00000555093.1
ENST00000556627.5
ENST00000557053.5
ENST00000557639.5
CDS TCA 72 bp GACATGCGGGTAGAGGGCATAGGCATGCAGGGATTCTaGCTTAGTCCCCACTTTGTTATGACCTACCTGTGG +
Preference number: 6 (lower is better)
Translates to: DMRVEGIGMQGF*LSPHFVMTYLW
Trigger: CCACAGGTAGGTCATAACAAAGTGGGGACTAAGTCAGAATCCCTGCATGCCTATGCCCTCTACCCGCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS GCA 72 bp CACAGCCAATGTGTGAGTGTAAGAGTGTGTCAGGTGTaGAAGGGTGCAAGTGTACAAGTGCCACACCTGCAG +
Preference number: 6 (lower is better)
Translates to: HSQCVSVRVCQV*KGASVQVPHLQ
Trigger: CTGCAGGTGTGGCACTTGTACACTTGCACCCTTGCACACCTGACACACTCTTACACTCACACATTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553838.5
CDS GCA 72 bp CTCCCTCTCCCCTCTGCCACCCCTAGCATATTAAGCTaGTCTCTGAACTTGCTATTGCCATCCCTGTACTAC +
Preference number: 6 (lower is better)
Translates to: LPLPSATPSILS*SLNLLLPSLYY
Trigger: GTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGTGGCAGAGGGGAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp CTCCTCTCCCACTTGCTTCAGGACAGACAGGTTCTGTaGAGCCCAAAGAAAATCTGTGATTGCGCTGACAGC +
Preference number: 6 (lower is better)
Translates to: LLSHLLQDRQVL*SPKKICDCADS
Trigger: GCTGTCAGCGCAATCACAGATTTTCTTTGGGCTGCACAGAACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp TGTGACCCTGCTTTAAACATGGTTGCCAAGGGGCTTTaGAGAGCAGTGTTGGGAGAAGTGTCAGTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: CDPALNMVAKGL*RAVLGEVSVPR
Trigger: CCTTGGGACTGACACTTCTCCCAACACTGCTCTCCAAAGCCCCTTGGCAACCATGTTTAAAGCAGGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553770.1
ENST00000555093.1
CDS CCA 72 bp ACTGTGTGGCCCTGGGCAAGTAACTTAATGGGCCTCTaGAGCCAGACTACCTGGTTCAAATTCCAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: TVWPWASNLMGL*SQTTWFKFQFC
Trigger: GCAGAACTGGAATTTGAACCAGGTAGTCTGGCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp CCTCTCCCCTCTGCCACCCCTAGCATATTAAGCTGCTCTCTGAACTaGCTATTGCCATCCCTGTACTACCAACTCAGTCTGCTAGATGGC +
Preference number: 6 (lower is better)
Translates to: PLPSATPSILSCSLN*LLPSLYYQLSLLDG
Trigger: GCCATCTAGCAGACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGTGGCAGAGGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp CCCTCTGCCACCCCTAGCATATTAAGCTGCTCTCTGAACTTGCTATaGCCATCCCTGTACTACCAACTCAGTCTGCTAGATGGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: PSATPSILSCSLNLL*PSLYYQLSLLDGKG
Trigger: ACCCTTGCCATCTAGCAGACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGTGGCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp ATACCAAGTGACTATGGGATGGAGGAGGGGTCACGGAGGATGGCTTaGCCTCCACACTCTGGAGGCAAGCTTCTTGGGTTCAAATTTCAT +
Preference number: 6 (lower is better)
Translates to: IPSDYGMEEGSRRMA*PPHSGGKLLGFKFH
Trigger: ATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTGTGGAGGCAAAGCCATCCTCCGTGACCCCTCCTCCATCCCATAGTCACTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp AGGTCCACAAGACCGGCTTCCAGAGATTTCCAGCCTGGCTCCATCTaGGCACCCCTGGAGCCATTTTCCCTCTGTTTCCTCATTATAAAA +
Preference number: 6 (lower is better)
Translates to: RSTRPASRDFQPGSI*APLEPFSLCFLIIK
Trigger: TTTTATAATGAGGAAACAGAGGGAAAATGGCTCCAGGGGTGCCAAGATGGAGCCAGGCTGGAAATCTCTGGAAGCCGGTCTTGTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS TCA 72 bp CTGGAGTCTGGACCTGGTGCAGGAACCAGCTCTGCATaGCCTTGGACAAACCTCTGCCTTTTTAAATCTTCG +
Preference number: 6 (lower is better)
Translates to: LESGPGAGTSSA*PWTNLCLFKSS
Trigger: CGAAGATTTAAAAAGGCAGAGGTTTGTCCAAGGTCATGCAGAGCTGGTTCCTGCACCAGGTCCAGACTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp AATAGGAATAGAGGATGGGCTTGCCAGACTCTGTCATaGTATCGTGGTGACCCTCAGCCTCCCAGGAAATGT +
Preference number: 6 (lower is better)
Translates to: NRNRGWACQTLS*YRGDPQPPRKC
Trigger: ACATTTCCTGGGAGGCTGAGGGTCACCACGATACCATGACAGAGTCTGGCAAGCCCATCCTCTATTCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553586.5
CDS CCA 72 bp ATTGCCATCCCTGTACTACCAACTCAGTCTGCTAGATaGCAAGGGTGTAAGTGGGAACCTAGGCCCTTCCAA +
Preference number: 6 (lower is better)
Translates to: IAIPVLPTQSAR*QGCKWEPRPFQ
Trigger: TTGGAAGGGCCTAGGTTCCCACTTACACCCTTGCCATCTAGCAGACTGAGTTGGTAGTACAGGGATGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp TTACTAGAGATTCTAGACAGGCATCAGGCTCTTTGGTaGCCTCAGAGCATTTGCCGTGACTCCAGTCACCAG +
Preference number: 6 (lower is better)
Translates to: LLEILDRHQALW*PQSICRDSSHQ
Trigger: CTGGTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGAATCTCTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GAGCTCAGGTGGCCACACACAGCACACACAGACAGATaGCACTCTTGTTCTGTTGGAGAAGAATCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: ELRWPHTAHTDR*HSCSVGEESLP
Trigger: TGGAAGAGATTCTTCTCCAACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCACCTGAGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp GGGTTCATCTTCTTGGAGGAAAGTTTCTCCTGGCACCCAGTGCTCTaGCTTACTGATCCCAGCAAATACCAAGTGACTATGGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: GFIFLEESFSWHPVL*LTDPSKYQVTMGWR
Trigger: CCTCCATCCCATAGTCACTTGGTATTTGCTGGGATCAGTAAGCAAGAGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAAGATGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp TGCATCTGTGCAAATCAGGGCAGACTCCAAGCTCTCTaGGAGGCTCATGAGGTCCCTTGGCTCCAAAATTAT +
Preference number: 6 (lower is better)
Translates to: CICANQGRLQAL*EAHEVPWLQNY
Trigger: ATAATTTTGGAGCCAAGGGACCTCATGAGCCTCTCAGAGAGCTTGGAGTCTGCCCTGATTTGCACAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555093.1
ENST00000555583.1
CDS TCA 72 bp CTTTGCAGGCTGCCCCAGTGGCCTCAAAAAGCCACGTaGTTCTGTCAGAGATGTGCAAGAATCCCTATTCAT +
Preference number: 6 (lower is better)
Translates to: LCRLPQWPQKAT*FCQRCARIPIH
Trigger: ATGAATAGGGATTCTTGCACATCTCTGACAGAATCACGTGGCTTTTTGAGGCCACTGGGGCAGCCTGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555208.1
CDS CCA 72 bp TGTTTACTAGAGATTCTAGACAGGCATCAGGCTCTTTaGTGGCCTCAGAGCATTTGCCGTGACTCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: CLLEILDRHQAL*WPQSICRDSSH
Trigger: GTGACTGGAGTCACGGCAAATGCTCTGAGGCCACCAAAGAGCCTGATGCCTGTCTAGAATCTCTAGTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp CACTCTGGAGGCAAGCTTCTTGGGTTCAAATTTCATCACAGTCATTaGCTAACTGTGTGGCCCTGGGCAAGTAACTTAATGGGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HSGGKLLGFKFHHSH*LTVWPWASNLMGLW
Trigger: CCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 90 bp GGAGCTCAGGTGGCCACACACAGCACACACAGACAGATGGCACTCTaGTTCTGTTGGAGAAGAATCTCTTCCAATCTATTCTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: GAQVATHSTHRQMAL*FCWRRISSNLFSLF
Trigger: GAACAGAGAGAATAGATTGGAAGAGATTCTTCTCCAACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCACCTGAGCTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp CTTGCTTCAGGACAGACAGGTTTGACTGGTGAATGGTaGTTCCATCAATCTTCAGGGTTGGCACCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LASGQTGLTGEW*FHQSSGLAPAS
Trigger: TGAAGCAGGTGCCAACCCTGAAGATTGATGGAATCACCATTCACCAGTCAAACCTGTCTGTCCTGAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349555.7
ENST00000557053.5
CDS CCA 72 bp GGGTTCAAATTTCATCACAGTCATTTGCTAACTGTGTaGCCCTGGGCAAGTAACTTAATGGGCCTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: GFKFHHSHLLTV*PWASNLMGLWS
Trigger: GCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp TCTGCCACCCCTAGCATATTAAGCTGCTCTCTGAACTaGCTATTGCCATCCCTGTACTACCAACTCAGTCTG +
Preference number: 6 (lower is better)
Translates to: SATPSILSCSLN*LLPSLYYQLSL
Trigger: CAGACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp AAATTTCATCACAGTCATTTGCTAACTGTGTGGCCCTaGGCAAGTAACTTAATGGGCCTCTGGAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: KFHHSHLLTVWP*ASNLMGLWSQT
Trigger: AGTCTGGCTCCAGAGGCCCATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp TTCTTGGAGGAAAGTTTCTCCTGGCACCCAGTGCTCTaGCTTACTGATCCCAGCAAATACCAAGTGACTATG +
Preference number: 6 (lower is better)
Translates to: FLEESFSWHPVL*LTDPSKYQVTM
Trigger: CATAGTCACTTGGTATTTGCTGGGATCAGTAAGCAAGAGCACTGGGTGCCAGGAGAAACTTTCCTCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp GTGGCCACACACAGCACACACAGACAGATGGCACTCTaGTTCTGTTGGAGAAGAATCTCTTCCAATCTATTC +
Preference number: 6 (lower is better)
Translates to: VATHSTHRQMAL*FCWRRISSNLF
Trigger: GAATAGATTGGAAGAGATTCTTCTCCAACAGAACAAGAGTGCCATCTGTCTGTGTGTGCTGTGTGTGGCCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GCAAGTAACTTAATGGGCCTCTGGAGCCAGACTACCTaGTTCAAATTCCAGTTCTGCCTCTTAGTAACTGAA +
Preference number: 6 (lower is better)
Translates to: ASNLMGLWSQTT*FKFQFCLLVTE
Trigger: TTCAGTTACTAAGAGGCAGAACTGGAATTTGAACCAGGTAGTCTGGCTCCAGAGGCCCATTAAGTTACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp GATGGCTTTGCCTCCACACTCTGGAGGCAAGCTTCTTaGGTTCAAATTTCATCACAGTCATTTGCTAACTGT +
Preference number: 6 (lower is better)
Translates to: DGFASTLWRQAS*VQISSQSFANC
Trigger: ACAGTTAGCAAATGACTGTGATGAAATTTGAACCCAAGAAGCTTGCCTCCAGAGTGTGGAGGCAAAGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp ACCCCTAGCATATTAAGCTGCTCTCTGAACTTGCTATaGCCATCCCTGTACTACCAACTCAGTCTGCTAGAT +
Preference number: 6 (lower is better)
Translates to: TPSILSCSLNLL*PSLYYQLSLLD
Trigger: ATCTAGCAGACTGAGTTGGTAGTACAGGGATGGCAATAGCAAGTTCAGAGAGCAGCTTAATATGCTAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS TCA 72 bp AGCATTTCAAAGTGGAACCCAGGAAAGACTCGCCAGTaGTTAGCACTCATGAATCTTCCCACCAAAACATGT +
Preference number: 6 (lower is better)
Translates to: SISKWNPGKTRQ*LALMNLPTKTC
Trigger: ACATGTTTTGGTGGGAAGATTCATGAGTGCTAATCACTGGCGAGTCTTTCCTGGGTTCCACTTTGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CAA 72 bp GGCAAGCTTCTTGGGTTCAAATTTCATCACAGTCATTaGCTAACTGTGTGGCCCTGGGCAAGTAACTTAATG +
Preference number: 6 (lower is better)
Translates to: GKLLGFKFHHSH*LTVWPWASNLM
Trigger: CATTAAGTTACTTGCCCAGGGCCACACAGTTAGCAAATGACTGTGATGAAATTTGAACCCAAGAAGCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS GCA 72 bp CTATGGATAGGGGAGAACTTGAAAGAACTTCTCAGATaGCCTGTTTACTACCCCTCTGACTATAGACATTTC +
Preference number: 6 (lower is better)
Translates to: LWIGENLKELLR*PVYYPSDYRHF
Trigger: GAAATGTCTATAGTCAGAGGGGTAGTAAACAGGGCATCTGAGAAGTTCTTTCAAGTTCTCCCCTATCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555093.1
CDS CCA 72 bp CCCTATAAGCCTTTTTGGACCTTATCATGCAGAACTTaGTTCTCCATGTGCTTGAATCTTCCCTTATTTTCC +
Preference number: 6 (lower is better)
Translates to: PYKPFWTLSCRT*FSMCLNLPLFS
Trigger: GGAAAATAAGGGAAGATTCAAGCACATGGAGAACCAAGTTCTGCATGATAAGGTCCAAAAAGGCTTATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553838.5
ENST00000555093.1
ENST00000556914.5