RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000277656

Ensembl transcript IDs: ENST00000612885.3, ENST00000621513.3, ENST00000625361.1, ENST00000626730.2, ENST00000628171.2, ENST00000628175.1, ENST00000628417.1, ENST00000628465.1, ENST00000628969.2, ENST00000629554.1, ENST00000630428.2, ENST00000630911.1, ENST00000631014.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTGGCTTCGGGAGGTaGGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTG +
Preference number: 1 (lower is better)
Translates to: SGGCGRQGGDGGFGR*GALGLGQVLGKPFL
Trigger: CAGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 90 bp ACAGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTaGGCAAGTCTTAGGCAAGCCATTCCTGCTTTCTGGGCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: TGWGWWLREVRCSGT*ASLRQAIPAFWAWL
Trigger: GAGCCAGGCCCAGAAAGCAGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR GCA 90 bp CGGCTGTGGAAGACAGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTaGTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: RLWKTGWGWWLREVR*SGTWASLRQAIPAF
Trigger: GAAAGCAGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 90 bp CTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTaGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGG +
Preference number: 1 (lower is better)
Translates to: LIVAFRRLWKTGWGW*LREVRCSGTWASLR
Trigger: CCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR GCA 90 bp CATGGCCAGCACCCAGGGCATCAGCTTCTGCTTTATGGTGGGGTCTaGAGGTGGGAAGTCCTTGGCCTTCAGAATGACCTCATGGGCCTC +
Preference number: 1 (lower is better)
Translates to: HGQHPGHQLLLYGGV*RWEVLGLQNDLMGL
Trigger: GAGGCCCATGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTGGGTGCTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR CCA 90 bp TGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTaGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCA +
Preference number: 1 (lower is better)
Translates to: CIILIVAFRRLWKTG*GWWLREVRCSGTWA
Trigger: TGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 90 bp CAGCACCCAGGGCATCAGCTTCTGCTTTATGGTGGGGTCTGCAGGTaGGAAGTCCTTGGCCTTCAGAATGACCTCATGGGCCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: QHPGHQLLLYGGVCR*EVLGLQNDLMGLLE
Trigger: TTCCAGGAGGCCCATGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR CCA 90 bp AAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTaGAAGACAGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCT +
Preference number: 1 (lower is better)
Translates to: KASVCIILIVAFRRL*KTGWGWWLREVRCS
Trigger: AGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 90 bp CACATCCAACTCTGCCAGGGTGGCTGCCAGTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGC +
Preference number: 1 (lower is better)
Translates to: HIQLCQGGCQCLGRY*LTQENREHHLMPQG
Trigger: GCCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCAGCCACCCTGGCAGAGTTGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
3UTR CCA 90 bp TTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTaGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCG +
Preference number: 1 (lower is better)
Translates to: FWAWLPWAIRNENAL*TAEDGARVRFPSSP
Trigger: CGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR TCA 90 bp TTAGAAATGAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTaGGGTTTCCCAGCTCACCGGATCATGGCCAGCACCCAGGGCATC +
Preference number: 1 (lower is better)
Translates to: LEMKMLCGLLRTVQG*GFPAHRIMASTQGI
Trigger: GATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR CCA 90 bp GGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTGCTTTCTGGGCCTaGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTGCT +
Preference number: 1 (lower is better)
Translates to: GTWASLRQAIPAFWA*LPWAIRNENALWTA
Trigger: AGCAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGCTTGCCTAAGACTTGCCCAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 90 bp TGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: CSGTWASLRQAIPAF*AWLPWAIRNENALW
Trigger: CCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR GCA 90 bp TCCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTCTCCGCAGAGTCGTGTaGTGCCATGCCAGGTACTCA +
Preference number: 2 (lower is better)
Translates to: SPTAASTRCRHVASLGRPLRRVV*CHARYS
Trigger: TGAGTACCTGGCATGGCAGCACACGACTCTGCGGAG...AGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621513.3
3UTR-3UTR CCA 90 bp AGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTCGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 2 (lower is better)
Translates to: RVGMVASGGEVLWDLGKSRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...AGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR GCA 90 bp CCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PRAAAMWPAWVGLRRLGSGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...GCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
3UTR-3UTR TCA 90 bp CGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 2 (lower is better)
Translates to: RAAAMWPAWVGLRRLGSQDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...CTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
3UTR-3UTR GCA 90 bp CTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGATTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 2 (lower is better)
Translates to: LLPPRAAAMWPAWVGLRRLSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...TCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
3UTR-3UTR GCA 90 bp ACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATCATGGCCAGGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: TAEDGARVRFPSSPDHGQGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...CTGGCCATGATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
3UTR-3UTR GCA 90 bp ACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATCATGGCCAGGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: TAEDGARVRFPSSPDHGQGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...CTGGCCATGATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR GCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGACGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 2 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR TCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 2 (lower is better)
Translates to: WWLREVRCSGTWASLRQADASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCC +
Preference number: 2 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGAIPAF*AWLPWA
Trigger: GGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGC...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR CCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGACAGGGTGGGGATGGTaGCTTCGGGAGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVTGWGW*LREVRC
Trigger: GCACCTCACCTCCCGAAGCCACCATCCCCACCCTGT...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR GCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 2 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR GCA 90 bp GCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATCAGGGCATCAGCTTCTaGTTTATGGTGGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: ALWTAEDGARVRFPSSPDQGISF*FMVGSA
Trigger: TGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTG...ATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR CCA 90 bp GCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATGCTTCTGCTTTATGGTaGGGTCTGCAGGTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: ALWTAEDGARVRFPSSPDASALW*GLQVGS
Trigger: ACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGC...ATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGACAGCTCACCGGATCATaGCCAGCACCCAGGGCATCA +
Preference number: 2 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGQLTGS*PAPRAS
Trigger: TGATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTG...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR-3UTR GCA 90 bp GAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCAGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: ENALWTAEDGARVRFPSSGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR CCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 2 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
3UTR CAA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: AFWAWLPWAIRNENA*WTAEDGARVRFPSS
Trigger: TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR TCA 90 bp GAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCATCAGCTAAGGAGATGTaGGGACCAGTAAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: ENALWTAEDGARVRFPSSSAKEM*GPVRKA
Trigger: GGCCTTCCTTACTGGTCCTCACATCTCCTTAGCTGA...TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR TCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTCAGCTAAGGAGATGTaGGGACCAGTAAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLSAKEM*GPVRKA
Trigger: GGCCTTCCTTACTGGTCCTCACATCTCCTTAGCTGA...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR-3UTR GCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTTTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 2 (lower is better)
Translates to: AFWAWLPWAIRNENALWTLSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
3UTR CCA 72 bp GCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTaGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCA +
Preference number: 3 (lower is better)
Translates to: AFRRLWKTGWGW*LREVRCSGTWA
Trigger: TGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 72 bp CTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTaGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: LIVAFRRLWKTG*GWWLREVRCSG
Trigger: CCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR TCA 72 bp CTTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTAAGGAGATGTGAGGAC +
Preference number: 3 (lower is better)
Translates to: LGSQHPRDASAP*WLRGQLRRCED
Trigger: GTCCTCACATCTCCTTAGCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
3UTR TCA 72 bp TGTGGAAGACAGGGTGGGGATGGTGGCTTCGGGAGGTaGGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAG +
Preference number: 3 (lower is better)
Translates to: CGRQGGDGGFGR*GALGLGQVLGK
Trigger: CTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 72 bp GTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTaGAAGACAGGGTGGGGATGGTGGCTTCGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: VCIILIVAFRRL*KTGWGWWLREV
Trigger: CACCTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CCA 72 bp AAGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTaGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: KDTRPQCASFSL*LSGGCGRQGGD
Trigger: ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp CCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTGAGGTCCTCCCCCACTaGTGCCTCCACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPLLPPRAAAMWPAWVGLEVLPH*CLHALP
Trigger: CGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGACCTC...AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTAASTRCRHVASLGRPSAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...CGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPLLPPRAAAMWPAWVGLRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTACAGCGCGGCAGGGCTaGGACAGCAGGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PPLLPPRAAAMWPAWVGLTARQG*DSRSRY
Trigger: GTACCTGGACCTGCTGTCCCAGCCCTGCCGCGCTGT...AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp TGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CCLHALPPCGQLGSAFEDAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...GTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp TCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGGAGGTCCTCCCCCACTaGTGCCTCCACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: STRCRHVASLGRPSKTWQEVLPH*CLHALP
Trigger: CGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGACCTC...CTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGCGGCCTTCGAAGACTTaGCAGCCAGCACCCACGGGA +
Preference number: 4 (lower is better)
Translates to: PTAASTRCRHVASLGRPSRPSKT*QPAPTG
Trigger: TCCCGTGGGTGCTGGCTGCCAAGTCTTCGAAGGCCG...CGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCCGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPRAAAMWPAWVGLRRLGRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...GCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLPPRAAAMWPAWVGLRRRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...TCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR TCA 90 bp CCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGGACGGTGCAAGGGTaGGGTTTCCCAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: PLLPPRAAAMWPAWVGLRRTVQG*GFPAHR
Trigger: CCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCT...TCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp CCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCGGTGGCTTCGGGAGGTaGGGTGCTCTGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PPRAAAMWPAWVGLRRLGGGFGR*GALGLG
Trigger: CCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACC...GCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp CGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCAGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RCRHVASLGRPSKTWQPAAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...TGCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp TGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACACACGGGCACGGGCCTaGAGGTCCTCTCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: CCLHALPPCGQLGSAFEDTRARA*RSSPSR
Trigger: CCTTGACGGAGAGGACCTGCAGGCCCGTGCCCGTGT...GTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628171.2
CDS-3UTR CCA 90 bp TCCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTGGTGGGGTCTGCAGGTaGGAAGTCCTTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPTAASTRCRHVASLGRPGGVCR*EVLGLQ
Trigger: CTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACC...AGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp GCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCCGGCCTTCGAAGACTTaGCAGCCAGCACCCACGGGA +
Preference number: 4 (lower is better)
Translates to: ALPPCGQLGSAFEDLAASRPSKT*QPAPTG
Trigger: TCCCGTGGGTGCTGGCTGCCAAGTCTTCGAAGGCCG...GCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGCGGCCTTCGAAGACTTaGCAGCCAGCACCCACGGGA +
Preference number: 4 (lower is better)
Translates to: TAASTRCRHVASLGRPSKRPSKT*QPAPTG
Trigger: TCCCGTGGGTGCTGGCTGCCAAGTCTTCGAAGGCCG...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp GCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: ALPPCGQLGSAFEDLAASAIPAF*AWLPWA
Trigger: GGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGC...GCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PRAAAMWPAWVGLRRLGSAIPAF*AWLPWA
Trigger: GGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGC...GCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp CCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGATGCTTTGTGGACTGCTaGGGACGGTGCAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PLLPPRAAAMWPAWVGLRCFVDC*GRCKGE
Trigger: CTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCA...TCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: TAASTRCRHVASLGRPSKPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp GCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: ALPPCGQLGSAFEDLAASPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...GCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGCAGCTCACCGGATCATaGCCAGCACCCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: TAASTRCRHVASLGRPSKQLTGS*PAPRAS
Trigger: TGATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTG...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCGCTTTCAGGCGGCTGTaGAAGACAGGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPRAAAMWPAWVGLRRLGAFRRL*KTGWGW
Trigger: CCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGC...GCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp CCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCCCTTGGCCTTCAGAATaGCCTCATGGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPRAAAMWPAWVGLRRLGPWPSE*PHGPPG
Trigger: TCCAGGAGGCCCATGAGGTCATTCTGAAGGCCAAGG...GCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RAAAMWPAWVGLRRLGSQGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...CTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000630428.2
CDS-3UTR GCA 90 bp CGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCTTCGGGAGGTGAGGTaGTCTGGGACTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RAAAMWPAWVGLRRLGSQLREVR*SGTWAS
Trigger: ACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG...CTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PTAASTRCRHVASLGRPSCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...CGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCACAGCTCACCGGATCATaGCCAGCACCCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LHALPPCGQLGSAFEDLAQLTGS*PAPRAS
Trigger: TGATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTG...TGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCCTGCTTTCTGGGCCTaGCTCCCATGGGCCATTAGA +
Preference number: 4 (lower is better)
Translates to: PRAAAMWPAWVGLRRLGSPAFWA*LPWAIR
Trigger: TCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGG...GCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp CTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGAGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLPPRAAAMWPAWVGLRRDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...TCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR TCA 90 bp CTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCACCTTGGCCTTCAGAATaGCCTCATGGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHALPPCGQLGSAFEDLAPWPSE*PHGPPG
Trigger: TCCAGGAGGCCCATGAGGTCATTCTGAAGGCCAAGG...TGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCAGGACGGTGCAAGGGTaGGGTTTCCCAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSRTVQG*GFPAHR
Trigger: CCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCT...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CCCCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCAGGGACCTTATATTTaGGCGTCAGGTAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPLLPPRAAAMWPAWVGLQGPYI*ASGRAG
Trigger: TCCTGCTCTACCTGACGCGCAAATATAAGGTCCCTG...AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR GCA 90 bp GCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ALWTAEDGARVRFPSSPDAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...ATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp TGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTGTCCTCCCCCACTGCTaGCTCCACGCGCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: WLREVRCSGTWASLRQAIVLPHC*LHALPP
Trigger: TGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGAC...AATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp CTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTGAGGTCCTCCCCCACTaGTGCCTCCACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LREVRCSGTWASLRQAIPEVLPH*CLHALP
Trigger: CGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGACCTC...AGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCTAAGGAGATGCGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: APTGCISSVMATRSAKEMRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...CATCTCCTTAGCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR TCA 90 bp ACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGGTGGCTTCGGGAGGTaGGGTGCTCTGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: TGNITLCHKARRQLLRRVGGFGR*GALGLG
Trigger: CCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACC...GACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR GCA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp CATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTGGTCCTCCCCCACTGCTaGCTCCACGCGCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HHSHCGFQAAVEDRVGMVVLPHC*LHALPP
Trigger: TGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGAC...CACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGCAGGGCATCAGCTTCTaGTTTATGGTGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TAASTRCRHVASLGRPSKQGISF*FMVGSA
Trigger: TGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTG...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp TGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: CCLHALPPCGQLGSAFEDCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...GTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: TAASTRCRHVASLGRPSKCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp TGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCGGCCTTCGAAGACTTaGCAGCCAGCACCCACGGGA +
Preference number: 4 (lower is better)
Translates to: WGWWLREVRCSGTWASLRRPSKT*QPAPTG
Trigger: TCCCGTGGGTGCTGGCTGCCAAGTCTTCGAAGGCCG...CCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp AGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTCAGCTCACCGGATCATaGCCAGCACCCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: RVGMVASGGEVLWDLGKSQLTGS*PAPRAS
Trigger: TGATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTG...AGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCTGCTTTGTGGACTGCTaGGGACGGTGCAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSCFVDC*GRCKGE
Trigger: CTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCA...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp AGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTCTCCGCAGAGTCGTGTaGTGCCATGCCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: RVGMVASGGEVLWDLGKSLRRVV*CHARYS
Trigger: TGAGTACCTGGCATGGCAGCACACGACTCTGCGGAG...AGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000630428.2
CDS-3UTR GCA 90 bp GTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCGTCCTCCCCCACTGCTaGCTCCACGCGCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VSGEILAHPGKQGTSPYAVLPHC*LHALPP
Trigger: TGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGAC...GGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCGGTGGGGTCTGCAGGTaGGAAGTCCTTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WWLREVRCSGTWASLRQAGGVCR*EVLGLQ
Trigger: CTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACC...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCAGCTTCTGCTTTATGGTaGGGTCTGCAGGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RCRHVASLGRPSKTWQPAASALW*GLQVGS
Trigger: ACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGC...TGCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp TCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGGCTTCTGCTTTATGGTaGGGTCTGCAGGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: STRCRHVASLGRPSKTWQASALW*GLQVGS
Trigger: ACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGC...CTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp TGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAGCTCACCGGATCATaGCCAGCACCCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: WGWWLREVRCSGTWASLRQLTGS*PAPRAS
Trigger: TGATGCCCTGGGTGCTGGCCATGATCCGGTGAGCTG...CCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp AGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTCCTGCTTTCTGGGCCTaGCTCCCATGGGCCATTAGA +
Preference number: 4 (lower is better)
Translates to: RVGMVASGGEVLWDLGKSPAFWA*LPWAIR
Trigger: TCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGG...AGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGAAGACAGGGTGGGGATaGTGGCTTCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GNITLCHKARRQLLRRVVKTGWG*WLREVR
Trigger: CCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTT...CACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCGCTTTCAGGCGGCTGTaGAAGACAGGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: WWLREVRCSGTWASLRQAAFRRL*KTGWGW
Trigger: CCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGC...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTGCTGGCTTTCAGGCGGCTGTaGAAGACAGGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: HHLMPQGPEAASPQSRVLAFRRL*KTGWGW
Trigger: CCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGC...CAGCACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR TCA 90 bp GGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGGGGGACCGACCGACCTaGCCGGAAACCAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GHKASVCIILIVAFRRLWGDRPT*PETRGS
Trigger: ACTCCCTCTGGTTTCCGGTCAGGTCGGTCGGTCCCC...CCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000612885.3
CDS-3UTR TCA 90 bp TGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCCTTGGCCTTCAGAATaGCCTCATGGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WGWWLREVRCSGTWASLRPWPSE*PHGPPG
Trigger: TCCAGGAGGCCCATGAGGTCATTCTGAAGGCCAAGG...CCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp CAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCTAAGTGCTTTGTGGACTGCTaGGGACGGTGCAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QPAPTGCISSVMATRSAKCFVDC*GRCKGE
Trigger: CTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCA...CTTAGCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCATTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LHALPPCGQLGSAFEDLALSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...TGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR GCA 90 bp CTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGCTGCCTCCACGCGCTaGCGCCATGTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSVHHSHCGFQAAVEDRVAASTR*RHVASL
Trigger: CAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGC...CACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGGTCACATCCAACTCTGCCAGGGTGGCTGCCAGTGTCTGGGGAGATACTGGCTCCCGTCCTTCAAGGCTaGCACCTTCTTGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSHPTLPGWLPVSGEILAPVLQG*HLLEGV
Trigger: AACCCCCTCAAGAAGGTGCCAGCCTTGAAGGACGGG...AGCCAGTATCTCCCCAGACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628171.2
ENST00000628465.1
CDS-3UTR CCA 90 bp CAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCTAAGGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: QPAPTGCISSVMATRSAKAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...CTTAGCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp TGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATCGCGCTGCCGCCATGTaGCCAGCTTGGGTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: CASFSLWLSGGCGRQGGDRAAAM*PAWVGL
Trigger: AAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCG...ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTCTGTGGAAGACAGGGTaGGGATGGTGGCTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GTSPYATRPGGSFSAESCLWKTG*GWWLRE
Trigger: CTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAG...ACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp CTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCATCATTCTCATTGTaGCTTTCAGGCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LHALPPCGQLGSAFEDLAASFSL*LSGGCG
Trigger: TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGC...TGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp TGCCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTGGGGACCGACCGACCTaGCCGGAAACCAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CQCLGRYWLTQENREHHLGDRPT*PETRGS
Trigger: ACTCCCTCTGGTTTCCGGTCAGGTCGGTCGGTCCCC...AAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR TCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGGTGGCTTCGGGAGGTaGGGTGCTCTGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVGGFGR*GALGLG
Trigger: CCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACC...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp GGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTSPYATRPGGSFSAESCGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...ACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR GCA 90 bp ACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTGCTGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TSPYATRPGGSFSAESCAGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...AGCACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR GCA 90 bp GCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALWTAEDGARVRFPSSPDGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...ATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp TGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATACAGCGCGGCAGGGCTaGGACAGCAGGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CASFSLWLSGGCGRQGGDTARQG*DSRSRY
Trigger: GTACCTGGACCTGCTGTCCCAGCCCTGCCGCGCTGT...ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: GWGWWLREVRCSGTWASLCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...AAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp ACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTGCTGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TSPYATRPGGSFSAESCAAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...AGCACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR CCA 90 bp TGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACAATGAAAATGCTTTGTaGACTGCTGAGGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: CCLHALPPCGQLGSAFEDNENAL*TAEDGA
Trigger: TGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATT...GTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCATGGGCCTGGCTCCCATaGGCCATTAGAAATGAAAAT +
Preference number: 4 (lower is better)
Translates to: LHALPPCGQLGSAFEDLAWAWLP*AIRNEN
Trigger: ATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCA...TGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp GGTCACATCCAACTCTGCCAGGGTGGCTGCCAGTGTCTGGGGAGATACTGGCTCAGGTGCTCTGGGACTTaGGCAAGTCTTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: GHIQLCQGGCQCLGRYWLRCSGT*ASLRQA
Trigger: GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCT...GAGCCAGTATCTCCCCAGACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCAAGGACGGTGCAAGGGTaGGGTTTCCCAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: ENALWTAEDGARVRFPSSRTVQG*GFPAHR
Trigger: CCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCT...TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp TGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTTCCTCTCCGTCAAGGTaGAGTCCCCGTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: WLREVRCSGTWASLRQAISSPSR*SPRPSR
Trigger: CCTTGAAGGACGGGGACTTCACCTTGACGGAGAGGA...AATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628171.2
CDS-3UTR TCA 90 bp AGGAAAACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCGGTTGCAGTGAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RKTGNITLCHKARRQLLRGCSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTCACTGCAACC...GCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR GCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGGTCCTCCCCCACTGCTaGCTCCACGCGCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALVLPHC*LHALPP
Trigger: TGGCGGCAGCGCGTGGAGGCAGCAGTGGGGGAGGAC...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp ACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCACACGGGCACGGGCCTaGAGGTCCTTTAATCAGATC +
Preference number: 4 (lower is better)
Translates to: TGNITLCHKARRQLLRRVTRARA*RSFNQI
Trigger: GATCTGATTAAAGGACCTGCAGGCCCGTGCCCGTGT...GACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630428.2
CDS-3UTR CCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAACAGCGCGGCAGGGCTaGGACAGCAGGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVETARQG*DSRSRY
Trigger: GTACCTGGACCTGCTGTCCCAGCCCTGCCGCGCTGT...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGACAGCGCGGCAGGGCTaGGACAGCAGGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: WGDTGSPRKTGNITLCHKTARQG*DSRSRY
Trigger: GTACCTGGACCTGCTGTCCCAGCCCTGCCGCGCTGT...CTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: PPRAAAMWPAWVGLRRLGECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...GCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCTTCAGAATGACCTCATaGGCCTCCTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WWLREVRCSGTWASLRQAFRMTS*ASWKRS
Trigger: GGACCTCTTCCAGGAGGCCCATGAGGTCATTCTGAA...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCTAAGTTCAGAATGACCTCATaGGCCTCCTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QPAPTGCISSVMATRSAKFRMTS*ASWKRS
Trigger: GGACCTCTTCCAGGAGGCCCATGAGGTCATTCTGAA...CTTAGCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTGGGTGGGGTCTGCAGGTaGGAAGTCCTTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HHSHCGFQAAVEDRVGMVGGVCR*EVLGLQ
Trigger: CTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACC...CACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTGCTTTCTGGGCCTaGCTCCCATGGGCCATTAGA +
Preference number: 4 (lower is better)
Translates to: WLREVRCSGTWASLRQAIPAFWA*LPWAIR
Trigger: TCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGG...AATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LSVHHSHCGFQAAVEDRVAIPAF*AWLPWA
Trigger: GGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGC...CACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGCCATTCCTGCTTTCTaGGCCTGGCTCCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVAIPAF*AWLPWA
Trigger: GGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGGC...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCACCGGATAGGTGCTCTGGGACTTaGGCAAGTCTTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: ALWTAEDGARVRFPSSPDRCSGT*ASLRQA
Trigger: GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCT...ATCCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAACAGGGTGGGGATGGTaGCTTCGGGAGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGTGWGW*LREVRC
Trigger: GCACCTCACCTCCCGAAGCCACCATCCCCACCCTGT...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATACAGGGTGGGGATGGTaGCTTCGGGAGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CASFSLWLSGGCGRQGGDTGWGW*LREVRC
Trigger: GCACCTCACCTCCCGAAGCCACCATCCCCACCCTGT...ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTGAAGACAGGGTGGGGATaGTGGCTTCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HHSHCGFQAAVEDRVGMVKTGWG*WLREVR
Trigger: CCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTT...CACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGCTGTGGAAGACAGGGTaGGGATGGTGGCTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GHKASVCIILIVAFRRLWLWKTG*GWWLRE
Trigger: CTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAG...CCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGTCAGGTAGAGCAGGATaGCCACACTTTAATCAGATC +
Preference number: 4 (lower is better)
Translates to: CLHALPPCGQLGSAFEDLSGRAG*PHFNQI
Trigger: GATCTGATTAAAGTGTGGCCATCCTGCTCTACCTGA...CAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR TCA 90 bp CAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGCACTCTCCGTCAAGGTaGAGTCCCCGTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QCASFSLWLSGGCGRQGGHSPSR*SPRPSR
Trigger: CCTTGAAGGACGGGGACTTCACCTTGACGGAGAGTG...CCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612885.3
CDS-3UTR TCA 90 bp TGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: WLREVRCSGTWASLRQAIDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...AATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GTGGCTGCCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCGCATCGCTTAAGTGCTaGCCTCCCCAGCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: VAASVWGDTGSPRKTGNIASLKC*PPQQEQ
Trigger: TTGTTCCTGCTGGGGAGGTCAGCACTTAAGCGATGC...GATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR GCA 90 bp CATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTGCTGCAGGGACCTTATATTTaGGCGTCAGGTAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HHLMPQGPEAASPQSRVLQGPYI*ASGRAG
Trigger: TCCTGCTCTACCTGACGCGCAAATATAAGGTCCCTG...CAGCACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000628465.1
CDS-3UTR GCA 90 bp AAAACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KTGNITLCHKARRQLLRRGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...TCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR GCA 90 bp AGGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTCACAAGGCCTCAGTGTaGATCATTCTCATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RVGMVASGGEVLWDLGKSHKASV*IILIVA
Trigger: AGCCACAATGAGAATGATGCACACTGAGGCCTTGTG...AGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTACAGCGCGGCAGGGCTaGGACAGCAGGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLTARQG*DSRSRY
Trigger: GTACCTGGACCTGCTGTCCCAGCCCTGCCGCGCTGT...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGAAGACAGGGTGGGGATaGTGGCTTCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVKTGWG*WLREVR
Trigger: CCTCACCTCCCGAAGCCACCATCCCCACCCTGTCTT...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCGCATCATTCTCATTGTaGCTTTCAGGCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: WWLREVRCSGTWASLRQAASFSL*LSGGCG
Trigger: TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGC...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACCACTCTCCGTCAAGGTaGAGTCCCCGTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VWGDTGSPRKTGNITLCHHSPSR*SPRPSR
Trigger: CCTTGAAGGACGGGGACTTCACCTTGACGGAGAGTG...GTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR GCA 90 bp GTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACCTCCGCAGAGTCGTGTaGTGCCATGCCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: VWGDTGSPRKTGNITLCHLRRVV*CHARYS
Trigger: TGAGTACCTGGCATGGCAGCACACGACTCTGCGGAG...GTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR GCA 90 bp CCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PQCASFSLWLSGGCGRQGGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...ACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp ACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCTTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: TGNITLCHKARRQLLRRVLSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...GACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR GCA 90 bp TGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: WGDTGSPRKTGNITLCHKPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...CTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR GCA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCCACAAGGCCTCAGTGTaGATCATTCTCATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WWLREVRCSGTWASLRQAHKASV*IILIVA
Trigger: AGCCACAATGAGAATGATGCACACTGAGGCCTTGTG...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATCCCGTCCTTCAAGGCTaGCACCTTCTTGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CASFSLWLSGGCGRQGGDPVLQG*HLLEGV
Trigger: AACCCCCTCAAGAAGGTGCCAGCCTTGAAGGACGGG...ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612885.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGCCCGTCCTTCAAGGCTaGCACCTTCTTGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GEILAHPGKQGTSPYATRPVLQG*HLLEGV
Trigger: AACCCCCTCAAGAAGGTGCCAGCCTTGAAGGACGGG...CCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR CCA 90 bp AAAACAGGGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGATCAGGTAGAGCAGGATaGCCACACTCTCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KTGNITLCHKARRQLLRRSGRAG*PHSPSR
Trigger: CCTTGACGGAGAGTGTGGCCATCCTGCTCTACCTGA...TCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628465.1
CDS-3UTR CCA 90 bp GAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCAGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: ENALWTAEDGARVRFPSSAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp TGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CASFSLWLSGGCGRQGGDDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...ATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GEILAHPGKQGTSPYATRDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...CCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR TCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGAGGACGGTGCAAGGGTaGGGTTTCCCAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALRTVQG*GFPAHR
Trigger: CCGGTGAGCTGGGAAACCTCACCCTTGCACCGTCCT...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGGGAACATCACCTTATaGCACAAGGCCCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVEGNITL*HKARRQ
Trigger: CTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCCC...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVEGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp TGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: WGDTGSPRKTGNITLCHKGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...CTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR GCA 90 bp CTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTTTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LREVRCSGTWASLRQAIPLSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...AGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTCCAGCACCCACGGGATaGATCAGCTCCGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLPAPTG*ISSVMA
Trigger: AGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGG...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATCTTCGGGAGGTGAGGTaGTCTGGGACTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PVSGEILAHPGKQGTSPYLREVR*SGTWAS
Trigger: ACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG...ATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGATCAGGTAGAGCAGGATaGCCACACTCTCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGSGRAG*PHSPSR
Trigger: CCTTGACGGAGAGTGTGGCCATCCTGCTCTACCTGA...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612885.3
CDS-3UTR CCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGCGGCCTTCGAAGACTTaGCAGCCAGCACCCACGGGA +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALRPSKT*QPAPTG
Trigger: TCCCGTGGGTGCTGGCTGCCAAGTCTTCGAAGGCCG...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTGGTGGGGTCTGCAGGTaGGAAGTCCTTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AFWAWLPWAIRNENALWTGGVCR*EVLGLQ
Trigger: CTGAAGGCCAAGGACTTCCCACCTGCAGACCCCACC...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp GGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGGCTTCTGCTTTATGGTaGGGTCTGCAGGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GHKASVCIILIVAFRRLWASALW*GLQVGS
Trigger: ACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGC...CCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGCCTGCTTTCTGGGCCTaGCTCCCATGGGCCATTAGA +
Preference number: 4 (lower is better)
Translates to: WGDTGSPRKTGNITLCHKPAFWA*LPWAIR
Trigger: TCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGG...CTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTCTGTGGAAGACAGGGTaGGGATGGTGGCTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: AFWAWLPWAIRNENALWTLWKTG*GWWLRE
Trigger: CTCCCGAAGCCACCATCCCCACCCTGTCTTCCACAG...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGATCAGCTAAGGAGATGTaGGGACCAGTAAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGSAKEM*GPVRKA
Trigger: GGCCTTCCTTACTGGTCCTCACATCTCCTTAGCTGA...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp CTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGATGCATCAGCTCCGTaGTGGCTACGAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LGRYWLTQENREHHLMPQDASAP*WLRGQL
Trigger: TAGCTGACCTCGTAGCCATCACGGAGCTGATGCATC...TTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR TCA 90 bp CTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTGCCTTGGCCTTCAGAATaGCCTCATGGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSGPGSHGPLEMKMLCGLPWPSE*PHGPPG
Trigger: TCCAGGAGGCCCATGAGGTCATTCTGAAGGCCAAGG...CAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTTGCTTTGTGGACTGCTaGGGACGGTGCAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AFWAWLPWAIRNENALWTCFVDC*GRCKGE
Trigger: CTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCA...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR TCA 90 bp CCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTAGCAGAGGCTCAGGCTaGGCCCAGGTTTATTATCCA +
Preference number: 4 (lower is better)
Translates to: PQCASFSLWLSGGCGRQGSRGSG*AQVYYP
Trigger: TGGATAATAAACCTGGGCTCAGCCTGAGCCTCTGCT...ACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR TCA 90 bp GGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGCCAGCAGAGGCTCAGGCTaGGCCCAGGTTTATTATCCA +
Preference number: 4 (lower is better)
Translates to: GDTGSPRKTGNITLCHKASRGSG*AQVYYP
Trigger: TGGATAATAAACCTGGGCTCAGCCTGAGCCTCTGCT...GGCCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR TCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGCAGAGGCTCAGGCTaGGCCCAGGTTTATTATCCA +
Preference number: 4 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGSRGSG*AQVYYP
Trigger: TGGATAATAAACCTGGGCTCAGCCTGAGCCTCTGCT...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTGGTCACATCCAACTCTaGCAGGGTGGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLGHIQL*QGGCQC
Trigger: ACACTGGCAGCCACCCTGGCAGAGTTGGATGTGACC...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTCTTCGGGAGGTGAGGTaGTCTGGGACTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLLREVR*SGTWAS
Trigger: ACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGCCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: CQCLGRYWLTQENREHHLCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...AAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGTTCAGAATGACCTCATaGGCCTCCTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSVHHSHCGFQAAVEDRVFRMTS*ASWKRS
Trigger: GGACCTCTTCCAGGAGGCCCATGAGGTCATTCTGAA...CACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp AGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACAAGGCCCGGCTTCTGCTTTATGGTaGGGTCTGCAGGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RYWLTQENREHHLMPQGPASALW*GLQVGS
Trigger: ACTTCCCACCTGCAGACCCCACCATAAAGCAGAAGC...CGGGCCTTGTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp GGAACATCACCTTATGCCACAAGGCCCGGAGGCAGCTTCTCCGCAGAGTCGTGTAATGAAAATGCTTTGTaGACTGCTGAGGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: GTSPYATRPGGSFSAESCNENAL*TAEDGA
Trigger: TGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATT...ACACGACTCTGCGGAGAAGCTGCCTCCGGGCCTTGTGGCATAAGGTGATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS-3UTR CCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAAGGTGCTCTGGGACTTaGGCAAGTCTTAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVERCSGT*ASLRQA
Trigger: GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCT...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
3UTR CAA 72 bp GCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: AWLPWAIRNENA*WTAEDGARVRF
Trigger: AAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp AGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: SVWGDTGSPRKTGNITLCCLGRY*LTQENR
Trigger: CCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACA...GCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGGCCATGTGGCCAGCTTaGGTCGGCCTTCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALAMWPA*VGLRRL
Trigger: AAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGC...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAACAGGGACCTTATATTTaGGCGTCAGGTAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVEQGPYI*ASGRAG
Trigger: TCCTGCTCTACCTGACGCGCAAATATAAGGTCCCTG...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612885.3
ENST00000621513.3
CDS-3UTR GCA 90 bp CCATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTCAGGGCATCAGCTTCTaGTTTATGGTGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFLLSGPGSHGPLEMKMLQGISF*FMVGSA
Trigger: TGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTG...AAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTCAGGGCATCAGCTTCTaGTTTATGGTGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AFWAWLPWAIRNENALWTQGISF*FMVGSA
Trigger: TGCAGACCCCACCATAAAGCAGAAGCTGATGCCCTG...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR GCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGCACAAGGCCTCAGTGTaGATCATTCTCATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVHKASV*IILIVA
Trigger: AGCCACAATGAGAATGATGCACACTGAGGCCTTGTG...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp TGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: WLREVRCSGTWASLRQAIECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...AATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTTTCAGAATGACCTCATaGGCCTCCTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AFWAWLPWAIRNENALWTFRMTS*ASWKRS
Trigger: GGACCTCTTCCAGGAGGCCCATGAGGTCATTCTGAA...AGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp CAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGAATGAAAATGCTTTGTaGACTGCTGAGGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: QCASFSLWLSGGCGRQGGNENAL*TAEDGA
Trigger: TGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATT...CCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp CATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACAGGGTGGGGATGGTGAATGAAAATGCTTTGTaGACTGCTGAGGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: HHSHCGFQAAVEDRVGMVNENAL*TAEDGA
Trigger: TGCACCGTCCTCAGCAGTCCACAAAGCATTTTCATT...CACCATCCCCACCCTGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGATGGGCCTGGCTCCCATaGGCCATTAGAAATGAAAAT +
Preference number: 4 (lower is better)
Translates to: DTRPQCASFSLWLSGGCGWAWLP*AIRNEN
Trigger: ATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCA...TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp ACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGCATCATTCTCATTGTaGCTTTCAGGCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TQGLSVHHSHCGFQAAVEASFSL*LSGGCG
Trigger: TCCACAGCCGCCTGAAAGCCACAATGAGAATGATGC...TTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR GCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTTGTCCTCGAGCAACTaGAGGGTCACATCCAACTCT +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALLSSSN*RVTSNS
Trigger: AGAGTTGGATGTGACCCTGCAGTTGCTCGAGGACAA...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CCA 90 bp TGCCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: CQCLGRYWLTQENREHHLECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...AAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp AGGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: RTQGLSVHHSHCGFQAAVECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...CACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CCA 90 bp GTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCCACGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: VWGDTGSPRKTGNITLCHECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...GTGGCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp AGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACCTTATGCGAATGTCGTTCTTCTTaGCAAAGATGTAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: SVWGDTGSPRKTGNITLCECRSS*QRCKQR
Trigger: GCGCTGTTTACATCTTTGCCAAGAAGAACGACATTC...GCATAAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628465.1
ENST00000630428.2
CDS-3UTR CCA 90 bp ATTCCTGCTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGGCCTGGCTCCCATaGGCCATTAGAAATGAAAAT +
Preference number: 4 (lower is better)
Translates to: IPAFWAWLPWAIRNENALWAWLP*AIRNEN
Trigger: ATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCA...CAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAGCAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS CCA 90 bp TGTCTCAGGGCTGGGCCCGCCTGGCTCCTGTGGGATCAGGGTGGGTaGCCAAGAGACCGTTGTCTCTCAGGGGGACGCACAGAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: CLRAGPAWLLWDQGG*PRDRCLSGGRTERP
Trigger: GGGCCTCTCTGTGCGTCCCCCTGAGAGACAACGGTCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGCCCAGCCCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CCA 90 bp GGCCTGTCTCAGGGCTGGGCCCGCCTGGCTCCTGTGGGATCAGGGTaGGTGGCCAAGAGACCGTTGTCTCTCAGGGGGACGCACAGAGAG +
Preference number: 5 (lower is better)
Translates to: GLSQGWARLAPVGSG*VAKRPLSLRGTHRE
Trigger: CTCTCTGTGCGTCCCCCTGAGAGACAACGGTCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGCCCAGCCCTGAGACAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CCA 90 bp CACTCTTTAGTCCAATTGCGGGCGGCGGGCGGCCTGTCTCAGGGCTaGGCCCGCCTGGCTCCTGTGGGATCAGGGTGGGTGGCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: HSLVQLRAAGGLSQG*ARLAPVGSGWVAKR
Trigger: TCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGCCCAGCCCTGAGACAGGCCGCCCGCCGCCCGCAATTGGACTAAAGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS-3UTR CAA 90 bp GCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGCCAGCCGCCATGTGGCCAGCTaGGGTCGGCCTTCGAAGACT +
Preference number: 5 (lower is better)
Translates to: ALPPCGQLGSAFEDLAASRHVAS*GRPSKT
Trigger: AGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCG...GCTGGCTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS CCA 90 bp GAGTCCAGCATGGTGGGTGGTGGGAGGAGAACGCTGAGCCCGCCATaGCCTGTGCCCCTCCCTGCAATGCTCTGGCCCCAGTTTCACAGT +
Preference number: 5 (lower is better)
Translates to: ESSMVGGGRRTLSPP*PVPLPAMLWPQFHS
Trigger: ACTGTGAAACTGGGGCCAGAGCATTGCAGGGAGGGGCACAGGCCATGGCGGGCTCAGCGTTCTCCTCCCACCACCCACCATGCTGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 90 bp CTCTTCCATGGGGAAGACCCATCCTGGGAAGCTGCAGCCCAGAGATaGAGCCACCGGGCAGCCCAGATGCCACTGAGCCATCGCCACACA +
Preference number: 5 (lower is better)
Translates to: LFHGEDPSWEAAAQR*SHRAAQMPLSHRHT
Trigger: TGTGTGGCGATGGCTCAGTGGCATCTGGGCTGCCCGGTGGCTCCATCTCTGGGCTGCAGCTTCCCAGGATGGGTCTTCCCCATGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS-3UTR CAA 90 bp TTGGCAGCCAGCACCCACGGGATGCATCAGCTCCGTGATGGCTACGAGGTCAGCCGCCATGTGGCCAGCTaGGGTCGGCCTTCGAAGACT +
Preference number: 5 (lower is better)
Translates to: LAASTHGMHQLRDGYEVSRHVAS*GRPSKT
Trigger: AGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCG...GCTGACCTCGTAGCCATCACGGAGCTGATGCATCCCGTGGGTGCTGGCTGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
ENST00000630428.2
CDS-3UTR CAA 90 bp CTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGAGCAGGTGGGAAGTCCTaGGCCTTCAGAATGACCTCA +
Preference number: 5 (lower is better)
Translates to: LLPPRAAAMWPAWVGLRRAGGKS*AFRMTS
Trigger: TGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGC...TCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS TCA 90 bp CAGGTCCAGGTACAGCTCCAGGCCCATAGTGGGGACCGACCGACCTaGCCGGAAACCAGAGGGAGTCAGCAAACTCCAGTGCCAGGACTC +
Preference number: 5 (lower is better)
Translates to: QVQVQLQAHSGDRPT*PETRGSQQTPVPGL
Trigger: GAGTCCTGGCACTGGAGTTTGCTGACTCCCTCTGGTTTCCGGTCAGGTCGGTCGGTCCCCACTATGGGCCTGGAGCTGTACCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631014.1
CDS GCA 90 bp CGCCACACAAGCTTGGCCAGAGGCCTGCCCCACGGTGGGCAAAGCTaGCATCGTCCTCTGGCCTACCCTGTCTCAAGGATACTCTCACCA +
Preference number: 5 (lower is better)
Translates to: RHTSLARGLPHGGQS*HRPLAYPVSRILSP
Trigger: TGGTGAGAGTATCCTTGAGACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCAAGCTTGTGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 90 bp CCATATCTGGTGGCTCTTCCATGGGGAAGACCCATCCTGGGAAGCTaGAGCCCAGAGATGGAGCCACCGGGCAGCCCAGATGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: PYLVALPWGRPILGS*SPEMEPPGSPDATE
Trigger: CTCAGTGGCATCTGGGCTGCCCGGTGGCTCCATCTCTGGGCTGCAGCTTCCCAGGATGGGTCTTCCCCATGGAAGAGCCACCAGATATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 90 bp CACAGTTCTTCTTCCCACCAGTCTGCACTCCTGGTTGGCAAAGACTaGAAGGGCCCCTGCGGGAGGAGGAGGAGACCACTCCACCGGCTG +
Preference number: 5 (lower is better)
Translates to: HSSSSHQSALLVGKD*KGPCGRRRRPLHRL
Trigger: CAGCCGGTGGAGTGGTCTCCTCCTCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 90 bp TGGCCAGAGGCCTGCCCCACGGTGGGCAAAGCTGCCATCGTCCTCTaGCCTACCCTGTCTCAAGGATACTCTCACCACTCACCAGCAACC +
Preference number: 5 (lower is better)
Translates to: WPEACPTVGKAAIVL*PTLSQGYSHHSPAT
Trigger: GGTTGCTGGTGAGTGGTGAGAGTATCCTTGAGACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 90 bp ACTGAGCCATCGCCACACAAGCTTGGCCAGAGGCCTGCCCCACGGTaGGCAAAGCTGCCATCGTCCTCTGGCCTACCCTGTCTCAAGGAT +
Preference number: 5 (lower is better)
Translates to: TEPSPHKLGQRPAPR*AKLPSSSGLPCLKD
Trigger: ATCCTTGAGACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCAAGCTTGTGTGGCGATGGCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS-3UTR CAA 90 bp TCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGACTTGGCAGGCAGGTGGGAAGTCCTaGGCCTTCAGAATGACCTCA +
Preference number: 5 (lower is better)
Translates to: STRCRHVASLGRPSKTWQAGGKS*AFRMTS
Trigger: TGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGC...CTGCCAAGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS CCA 90 bp TACCTGGGGGTCACAACGCTGAGTGACACAAGGACTCAGGACACCTaGGGCACCAGGGAGGAAGACGGGCCCTGGCAGAATGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: YLGVTTLSDTRTQDT*GTREEDGPWQNVRG
Trigger: TCCTCTGACATTCTGCCAGGGCCCGTCTTCCTCCCTGGTGCCCCAGGTGTCCTGAGTCCTTGTGTCACTCAGCGTTGTGACCCCCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS-3UTR CAA 90 bp CCCACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGT +
Preference number: 5 (lower is better)
Translates to: PTAASTRCRHVASLGRPSRNENA*WTAEDG
Trigger: ACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCT...CGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS CCA 90 bp TCTGGCCCCAGTTTCACAGTTCTTCTTCCCACCAGTCTGCACTCCTaGTTGGCAAAGACTGGAAGGGCCCCTGCGGGAGGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: SGPSFTVLLPTSLHS*LAKTGRAPAGGGGD
Trigger: GTCTCCTCCTCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTGAAACTGGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS-3UTR CAA 90 bp GGGTGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTGCAGGTGGGAAGTCCTaGGCCTTCAGAATGACCTCA +
Preference number: 5 (lower is better)
Translates to: GWGWWLREVRCSGTWASLAGGKS*AFRMTS
Trigger: TGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGC...AAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS GCA 90 bp TGCAATGCTCTGGCCCCAGTTTCACAGTTCTTCTTCCCACCAGTCTaGACTCCTGGTTGGCAAAGACTGGAAGGGCCCCTGCGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: CNALAPVSQFFFPPV*TPGWQRLEGPLREE
Trigger: CTCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTGAAACTGGGGCCAGAGCATTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 90 bp CTCCCACAGGCTGCCCCTCTGCAACAGAGCTCACTGTGCAGGGTGTaGTTCCTGGACCTTTGCATGCACCCTACCCATCTCCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LPQAAPLQQSSLCRV*FLDLCMHPTHLLFP
Trigger: TGGAAAGAGGAGATGGGTAGGGTGCATGCAAAGGTCCAGGAACCACACCCTGCACAGTGAGCTCTGTTGCAGAGGGGCAGCCTGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS-3UTR CAA 90 bp GGACACAAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGCGCCATGTGGCCAGCTaGGGTCGGCCTTCGAAGACT +
Preference number: 5 (lower is better)
Translates to: GHKASVCIILIVAFRRLWRHVAS*GRPSKT
Trigger: AGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCG...CCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTTGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CAA 90 bp TGGCTGCCAGTGTCTGGGGAGATACTGGCTCACCCAGGAAAACAGGGAACATCACGCCATGTGGCCAGCTaGGGTCGGCCTTCGAAGACT +
Preference number: 5 (lower is better)
Translates to: WLPVSGEILAHPGKQGTSRHVAS*GRPSKT
Trigger: AGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCG...TGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621513.3
ENST00000630428.2
CDS-3UTR CAA 90 bp ACTGCTGCCTCCACGCGCTGCCGCCATGTGGCCAGCTTGGGTCGGCCTTCGAAGAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGT +
Preference number: 5 (lower is better)
Translates to: TAASTRCRHVASLGRPSKRNENA*WTAEDG
Trigger: ACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCT...CTTCGAAGGCCGACCCAAGCTGGCCACATGGCGGCAGCGCGTGGAGGCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS CCA 90 bp GGGACCAGCTGTGATGTAAGACGTCCATATCTGGTGGCTCTTCCATaGGGAAGACCCATCCTGGGAAGCTGCAGCCCAGAGATGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GTSCDVRRPYLVALP*GRPILGSCSPEMEP
Trigger: TGGCTCCATCTCTGGGCTGCAGCTTCCCAGGATGGGTCTTCCCCATGGAAGAGCCACCAGATATGGACGTCTTACATCACAGCTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 90 bp CACATCCAACTCTGCCAGGGTGGCTGCCAGTGTCTGGGGAGATACTaGCTCACCCAGGAAAACAGGGAACATCACCTCTCCGTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HIQLCQGGCQCLGRY*LTQENREHHLSVKV
Trigger: CACCTTGACGGAGAGGTGATGTTCCCTGTTTTCCTGGGTGAGCCAGTATCTCCCCAGACACTGGCAGCCACCCTGGCAGAGTTGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628969.2
CDS GCA 90 bp GCTACACACGTGTCCCAGCTTAACGACTCCGTTGTCTGTGCAGGGTaGCCAGGAGCTCCTTTTGCTCCCAGCCAATTGTTCAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: ATHVSQLNDSVVCAG*PGAPFAPSQLFKPP
Trigger: AGGTGGCTTGAACAATTGGCTGGGAGCAAAAGGAGCTCCTGGGCACCCTGCACAGACAACGGAGTCGTTAAGCTGGGACACGTGTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS-3UTR CAA 90 bp TGGGGATGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGTGTGCATCATTCTCATaGTGGCTTTCAGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: WGWWLREVRCSGTWASLRCASFS*WLSGGC
Trigger: ACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA...CCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS GCA 90 bp TGGACGTCCTCTTGTCCCCCATTCCCTTTCCTCTACTCCACACTCTaGAGAGGAAGTCCTTGCGCAGGACAGTGGGCAGTTTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: WTSSCPPFPFLYSTL*RGSPCAGQWAVCRR
Trigger: TCTTCTGCAAACTGCCCACTGTCCTGCGCAAGGACTTCCTCTGCAGAGTGTGGAGTAGAGGAAAGGGAATGGGGGACAAGAGGACGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CCA 90 bp TGCTGGCTCACCTTTCTCTGTTCGGTCTCCAAACCAGACCAGCAATaGCCCCAGGAAGAAGGTGGCGCTGGGAGAAGTTCCCTAAGCTAT +
Preference number: 5 (lower is better)
Translates to: CWLTFLCSVSKPDQQ*PQEEGGAGRSSLSY
Trigger: ATAGCTTAGGGAACTTCTCCCAGCGCCACCTTCTTCCTGGGGCCATTGCTGGTCTGGTTTGGAGACCGAACAGAGAAAGGTGAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS-3UTR CAA 90 bp CTTTCTGGGCCTGGCTCCCATGGGCCATTAGAAATGAAAATGCTTTGTGGACTGCGCCATGTGGCCAGCTaGGGTCGGCCTTCGAAGACT +
Preference number: 5 (lower is better)
Translates to: LSGPGSHGPLEMKMLCGLRHVAS*GRPSKT
Trigger: AGTCTTCGAAGGCCGACCCAAGCTGGCCACATGGCG...CAGTCCACAAAGCATTTTCATTTCTAATGGCCCATGGGAGCCAGGCCCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS TCA 90 bp ACTCTCCTCCTTCCCTGGGTTTTGAGGGCCGCCATGGTGATGAGATaGGCATGGACCTGGAAGGACACAGGATGTGTCCATTTGGAGACA +
Preference number: 5 (lower is better)
Translates to: TLLLPWVLRAAMVMR*AWTWKDTGCVHLET
Trigger: TGTCTCCAAATGGACACATCCTGTGTCCTTCCAGGTCCATGCTCATCTCATCACCATGGCGGCCCTCAAAACCCAGGGAAGGAGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 90 bp TCCACACTCTGCAGAGGAAGTCCTTGCGCAGGACAGTGGGCAGTTTaGAGAAGAGATTATGTGGAGAAGTTTCAGGCAGAGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: STLCRGSPCAGQWAV*RRDYVEKFQAEGQP
Trigger: TGGCTGGCCCTCTGCCTGAAACTTCTCCACATAATCTCTTCTGCAAACTGCCCACTGTCCTGCGCAAGGACTTCCTCTGCAGAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS-3UTR CAA 90 bp GAAAATGCTTTGTGGACTGCTGAGGACGGTGCAAGGGTGAGGTTTCCCAGCTCAGCAGGTGGGAAGTCCTaGGCCTTCAGAATGACCTCA +
Preference number: 5 (lower is better)
Translates to: ENALWTAEDGARVRFPSSAGGKS*AFRMTS
Trigger: TGAGGTCATTCTGAAGGCCAAGGACTTCCCACCTGC...TGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621513.3
ENST00000628171.2
ENST00000629554.1
CDS-3UTR CAA 90 bp TGGTGGCTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGT +
Preference number: 5 (lower is better)
Translates to: WWLREVRCSGTWASLRQARNENA*WTAEDG
Trigger: ACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCT...GGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS-3UTR CAA 90 bp CTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTTGTGCATCATTCTCATaGTGGCTTTCAGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: LREVRCSGTWASLRQAIPCASFS*WLSGGC
Trigger: ACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA...AGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS TCA 90 bp CCTCTGTCTCCTGGGAAAACACACTTCCCTCTGCACCACTACATTTaGCAACCAGCTTGGACGTCCTCTTGTCCCCCATTCCCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: PLSPGKTHFPLHHYI*QPAWTSSCPPFPFL
Trigger: GAGGAAAGGGAATGGGGGACAAGAGGACGTCCAAGCTGGTTGTCAAATGTAGTGGTGCAGAGGGAAGTGTGTTTTCCCAGGAGACAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS GCA 90 bp ACCAGGAAAACCCTCCTCTGTCTCCTGGGAAAACACACTTCCCTCTaGACCACTACATTTGACAACCAGCTTGGACGTCCTCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: TRKTLLCLLGKHTSL*TTTFDNQLGRPLVP
Trigger: GGGGACAAGAGGACGTCCAAGCTGGTTGTCAAATGTAGTGGTGCAGAGGGAAGTGTGTTTTCCCAGGAGACAGAGGAGGGTTTTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS GCA 90 bp ACTGGGGTAGTTTGGCTTCCTAAAGTACCACTCAGGAAGCACTCCTaGAGCTGCAGGATCCTAGAACAACAGAACAGACAAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: TGVVWLPKVPLRKHS*SCRILEQQNRQGPL
Trigger: CAGGGGGCCTTGTCTGTTCTGTTGTTCTAGGATCCTGCAGCTGCAGGAGTGCTTCCTGAGTGGTACTTTAGGAAGCCAAACTACCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 90 bp TCCTGGACCTTTGCATGCACCCTACCCATCTCCTCTTTCCACTATTaGCAGCTTCATGAACTCACAATCAGAGCACCCCAAGCTGCACGA +
Preference number: 5 (lower is better)
Translates to: SWTFACTLPISSFHY*QLHELTIRAPQAAR
Trigger: TCGTGCAGCTTGGGGTGCTCTGATTGTGAGTTCATGAAGCTGGCAATAGTGGAAAGAGGAGATGGGTAGGGTGCATGCAAAGGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS GCA 90 bp CCGGGAGGTGGTGGTTGCAGTGATTCGAGATCCGTGCCACTGCACTaGAACAAAGCAAAAGCAAGACTCTTTAATCAGATCCACGATGCG +
Preference number: 5 (lower is better)
Translates to: PGGGGCSDSRSVPLH*NKAKARLFNQIHDA
Trigger: CGCATCGTGGATCTGATTAAAGAGTCTTGCTTTTGCTTTGTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625361.1
CDS-3UTR CAA 90 bp CTTCGGGAGGTGAGGTGCTCTGGGACTTGGGCAAGTCTTAGGCAAGCCATTCCTAGAAATGAAAATGCTTaGTGGACTGCTGAGGACGGT +
Preference number: 5 (lower is better)
Translates to: LREVRCSGTWASLRQAIPRNENA*WTAEDG
Trigger: ACCGTCCTCAGCAGTCCACAAAGCATTTTCATTTCT...AGGAATGGCTTGCCTAAGACTTGCCCAAGTCCCAGAGCACCTCACCTCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS TCA 90 bp TCCATTCGGTATCCACTCTCATCTGCTGGGATTCCGACCAGCCTCTaGTGGCCTGACTGTTCAAAAAGGCTTCCGTGTCCCTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SIRYPLSSAGIPTSL*WPDCSKRLPCPFVL
Trigger: AAGAACAAAGGGACACGGAAGCCTTTTTGAACAGTCAGGCCATCAGAGGCTGGTCGGAATCCCAGCAGATGAGAGTGGATACCGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 90 bp GAAAGTCACGTCCTGAGCTGTTTGCTGTTGCAGAATCTCAGCAGCTaGGCCATAAAGAAGGGACTTGACGCTGTCCCAGTCTCTACACTT +
Preference number: 5 (lower is better)
Translates to: ESHVLSCLLLQNLSS*AIKKGLDAVPVSTL
Trigger: AAGTGTAGAGACTGGGACAGCGTCAAGTCCCTTCTTTATGGCCCAGCTGCTGAGATTCTGCAACAGCAAACAGCTCAGGACGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 90 bp CTTTCTGCCAAGAATCAGCTCCTATCTAAGCTGACTGGGGTAGTTTaGCTTCCTAAAGTACCACTCAGGAAGCACTCCTGCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSAKNQLLSKLTGVV*LPKVPLRKHSCSCR
Trigger: CCTGCAGCTGCAGGAGTGCTTCCTGAGTGGTACTTTAGGAAGCCAAACTACCCCAGTCAGCTTAGATAGGAGCTGATTCTTGGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS-3UTR CAA 90 bp AAGGCCTCAGTGTGCATCATTCTCATTGTGGCTTTCAGGCGGCTGTGGAAGACATGTGCATCATTCTCATaGTGGCTTTCAGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: KASVCIILIVAFRRLWKTCASFS*WLSGGC
Trigger: ACAGCCGCCTGAAAGCCACAATGAGAATGATGCACA...TGTCTTCCACAGCCGCCTGAAAGCCACAATGAGAATGATGCACACTGAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612885.3
ENST00000621513.3
ENST00000628171.2
CDS TCA 90 bp GTATCCACTCTCATCTGCTGGGATTCCGACCAGCCTCTGATGGCCTaGCTGTTCAAAAAGGCTTCCGTGTCCCTTTGTTCTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: VSTLICWDSDQPLMA*LFKKASVSLCSFCH
Trigger: ATGACAGAAAGAACAAAGGGACACGGAAGCCTTTTTGAACAGTCAGGCCATCAGAGGCTGGTCGGAATCCCAGCAGATGAGAGTGGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 90 bp GAGGAAGACGGGCCCTGGCAGAATGTCAGAGGAATTCATCGGAGGTaGGTCCATCCTGAGATTTCAGAGATGAGCTTTAAAGCACAAACT +
Preference number: 5 (lower is better)
Translates to: EEDGPWQNVRGIHRR*VHPEISEMSFKAQT
Trigger: AGTTTGTGCTTTAAAGCTCATCTCTGAAATCTCAGGATGGACGCACCTCCGATGAATTCCTCTGACATTCTGCCAGGGCCCGTCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 90 bp AGATTGGCTTTTCCTGAAGAGGATTCAACTTCTTGGGACCAGCTGTaGTGTAAGACGTCCATATCTGGTGGCTCTTCCATGGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: RLAFPEEDSTSWDQL*CKTSISGGSSMGKT
Trigger: GGTCTTCCCCATGGAAGAGCCACCAGATATGGACGTCTTACATCACAGCTGGTCCCAAGAAGTTGAATCCTCTTCAGGAAAAGCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 90 bp TTCGTGCCTGGCTCGCTCATTTCACTTAGCATAATGTCTTCAAGGTaGATCTGTGTTGAAGCGTGTGTCAGAATTTCCCACCGTCCGCAT +
Preference number: 5 (lower is better)
Translates to: FVPGSLISLSIMSSR*ICVEACVRISHRPH
Trigger: ATGCGGACGGTGGGAAATTCTGACACACGCTTCAACACAGATGCACCTTGAAGACATTATGCTAAGTGAAATGAGCGAGCCAGGCACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CCA 90 bp CACAGGATGTGTCCATTTGGAGACACAGAAAAGCTTTCAGGAACTTaGGGTTTCCCAAAGGTTGGGCATGCAGGCCAAAAGGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: HRMCPFGDTEKLSGT*GFPKVGHAGQKGRK
Trigger: TTTTCTGCCCTTTTGGCCTGCATGCCCAACCTTTGGGAAACCCCAAGTTCCTGAAAGCTTTTCTGTGTCTCCAAATGGACACATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 90 bp TCAGAGGAATTCATCGGAGGTGCGTCCATCCTGAGATTTCAGAGATaGGCTTTAAAGCACAAACTCCAGGTTCTTGTTAGGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SEEFIGGASILRFQR*ALKHKLQVLVRGRV
Trigger: CACCCTTCCCCTAACAAGAACCTGGAGTTTGTGCTTTAAAGCTCATCTCTGAAATCTCAGGATGGACGCACCTCCGATGAATTCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 90 bp ATCAGAGAACCAGAGAGAGCTTCCAGGAGAACGGGGCATCAAAGCTaGGCTTTAAAGAAGCTCAGTTCTTTCCATTCGGTATCCACTCTC +
Preference number: 5 (lower is better)
Translates to: IREPERASRRTGHQS*ALKKLSSFHSVSTL
Trigger: GAGAGTGGATACCGAATGGAAAGAACTGAGCTTCTTTAAAGCTCAGCTTTGATGCCCCGTTCTCCTGGAAGCTCTCTCTGGTTCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 90 bp GTCAGAATTTCCCACCGTCCGCATTTTAGAGGAGGAGACAGACACTaGATGATTATAGACCCAGAAAGTCTGGCTCCAAAGTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: VRISHRPHFRGGDRH*MIIDPESLAPKSIL
Trigger: GAGGATGGACTTTGGAGCCAGACTTTCTGGGTCTATAATCATTCAGTGTCTGTCTCCTCCTCTAAAATGCGGACGGTGGGAAATTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS TCA 90 bp ACTGACTACCTTGTCCCTTCCACCATTAATTCTAAGGCAGGGTCATaGAACACAGAGAAGTGGTCTTTTTCTGGTATCTACCTACTTAGA +
Preference number: 5 (lower is better)
Translates to: TDYLVPSTINSKAGS*NTEKWSFSGIYLLR
Trigger: TCTAAGTAGGTAGATACCAGAAAAAGACCACTTCTCTGTGTTTCATGACCCTGCCTTAGAATTAATGGTGGAAGGGACAAGGTAGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 72 bp CAGGGCTGGGCCCGCCTGGCTCCTGTGGGATCAGGGTaGGTGGCCAAGAGACCGTTGTCTCTCAGGGGGACG +
Preference number: 6 (lower is better)
Translates to: QGWARLAPVGSG*VAKRPLSLRGT
Trigger: CGTCCCCCTGAGAGACAACGGTCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGCCCAGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CCA 72 bp ATGGTGGGTGGTGGGAGGAGAACGCTGAGCCCGCCATaGCCTGTGCCCCTCCCTGCAATGCTCTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: MVGGGRRTLSPP*PVPLPAMLWPQ
Trigger: CTGGGGCCAGAGCATTGCAGGGAGGGGCACAGGCCATGGCGGGCTCAGCGTTCTCCTCCCACCACCCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 72 bp GCTGGGCCCGCCTGGCTCCTGTGGGATCAGGGTGGGTaGCCAAGAGACCGTTGTCTCTCAGGGGGACGCACA +
Preference number: 6 (lower is better)
Translates to: AGPAWLLWDQGG*PRDRCLSGGRT
Trigger: TGTGCGTCCCCCTGAGAGACAACGGTCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CAA 90 bp AGCCACCGGGCAGCCCAGATGCCACTGAGCCATCGCCACACAAGCTaGGCCAGAGGCCTGCCCCACGGTGGGCAAAGCTGCCATCGTCCT +
Preference number: 6 (lower is better)
Translates to: SHRAAQMPLSHRHTS*ARGLPHGGQSCHRP
Trigger: AGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCAAGCTTGTGTGGCGATGGCTCAGTGGCATCTGGGCTGCCCGGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CAA 90 bp GCCCGCCTGGCTCCTGTGGGATCAGGGTGGGTGGCCAAGAGACCGTaGTCTCTCAGGGGGACGCACAGAGAGGCCCCAGTCCCATCCCTT +
Preference number: 6 (lower is better)
Translates to: ARLAPVGSGWVAKRP*SLRGTHREAPVPSL
Trigger: AAGGGATGGGACTGGGGCCTCTCTGTGCGTCCCCCTGAGAGACAACGGTCTCTTGGCCACCCACCCTGATCCCACAGGAGCCAGGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS CCA 72 bp CCCAGGGTCCCCCTGCTGCTTCCAGCATCAGCAGCCTaGGGCAACCTACCTCCCCAGCAGGAACAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PRVPLLLPASAA*GNLPPQQEQEA
Trigger: TGCCTCTTGTTCCTGCTGGGGAGGTAGGTTGCCCCAGGCTGCTGATGCTGGAAGCAGCAGGGGGACCCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CCA 72 bp TCGCCACACAAGCTTGGCCAGAGGCCTGCCCCACGGTaGGCAAAGCTGCCATCGTCCTCTGGCCTACCCTGT +
Preference number: 6 (lower is better)
Translates to: SPHKLGQRPAPR*AKLPSSSGLPC
Trigger: ACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCAAGCTTGTGTGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 72 bp GTGGCTCTTCCATGGGGAAGACCCATCCTGGGAAGCTaGAGCCCAGAGATGGAGCCACCGGGCAGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: VALPWGRPILGS*SPEMEPPGSPD
Trigger: ATCTGGGCTGCCCGGTGGCTCCATCTCTGGGCTGCAGCTTCCCAGGATGGGTCTTCCCCATGGAAGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 72 bp AGCTTGGCCAGAGGCCTGCCCCACGGTGGGCAAAGCTaGCATCGTCCTCTGGCCTACCCTGTCTCAAGGATA +
Preference number: 6 (lower is better)
Translates to: SLARGLPHGGQS*HRPLAYPVSRI
Trigger: TATCCTTGAGACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGCCTCTGGCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 72 bp GTACAGCTCCAGGCCCATAGTGGGGACCGACCGACCTaGCCGGAAACCAGAGGGAGTCAGCAAACTCCAGTG +
Preference number: 6 (lower is better)
Translates to: VQLQAHSGDRPT*PETRGSQQTPV
Trigger: CACTGGAGTTTGCTGACTCCCTCTGGTTTCCGGTCAGGTCGGTCGGTCCCCACTATGGGCCTGGAGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631014.1
CDS CCA 72 bp GCCTGCCCCACGGTGGGCAAAGCTGCCATCGTCCTCTaGCCTACCCTGTCTCAAGGATACTCTCACCACTCA +
Preference number: 6 (lower is better)
Translates to: ACPTVGKAAIVL*PTLSQGYSHHS
Trigger: TGAGTGGTGAGAGTATCCTTGAGACAGGGTAGGCCAGAGGACGATGGCAGCTTTGCCCACCGTGGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 72 bp GTCACAACGCTGAGTGACACAAGGACTCAGGACACCTaGGGCACCAGGGAGGAAGACGGGCCCTGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: VTTLSDTRTQDT*GTREEDGPWQN
Trigger: ATTCTGCCAGGGCCCGTCTTCCTCCCTGGTGCCCCAGGTGTCCTGAGTCCTTGTGTCACTCAGCGTTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 72 bp GGAATAGCAGGAAGGCAAGGGCCTGGGGTCCAGTACTaGCTCTCTGCAGGATGCGGGGCACAGAGACTCTCT +
Preference number: 6 (lower is better)
Translates to: GIAGRQGPGVQY*LSAGCGAQRLS
Trigger: AGAGAGTCTCTGTGCCCCGCATCCTGCAGAGAGTCAGTACTGGACCCCAGGCCCTTGCCTTCCTGCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 72 bp GCTGCCCCTCTGCAACAGAGCTCACTGTGCAGGGTGTaGTTCCTGGACCTTTGCATGCACCCTACCCATCTC +
Preference number: 6 (lower is better)
Translates to: AAPLQQSSLCRV*FLDLCMHPTHL
Trigger: GAGATGGGTAGGGTGCATGCAAAGGTCCAGGAACCACACCCTGCACAGTGAGCTCTGTTGCAGAGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 72 bp TCACAGTTCTTCTTCCCACCAGTCTGCACTCCTGGTTaGCAAAGACTGGAAGGGCCCCTGCGGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SQFFFPPVCTPG*QRLEGPLREEE
Trigger: CTCCTCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 72 bp CTGGGGCTACACACGTGTCCCAGCTTAACGACTCCGTaGTCTGTGCAGGGTGCCCAGGAGCTCCTTTTGCTC +
Preference number: 6 (lower is better)
Translates to: LGLHTCPSLTTP*SVQGAQELLLL
Trigger: GAGCAAAAGGAGCTCCTGGGCACCCTGCACAGACAACGGAGTCGTTAAGCTGGGACACGTGTGTAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CAA 90 bp GTGGGAGCCCTGGGCAGAAGGCTTAGCCAAGTAGAGTCGCCTTACTaGCCCCACCAGCCATACCTGGATTCTGCTTCCAACCCCTCCTAC +
Preference number: 6 (lower is better)
Translates to: VGALGRRLSQVESPY*PHQPYLDSASNPSY
Trigger: GTAGGAGGGGTTGGAAGCAGAATCCAGGTATGGCTGGTGGGGCAAGTAAGGCGACTCTACTTGGCTAAGCCTTCTGCCCAGGGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CAA 72 bp GACTTGACGCTGTCCCAGTCTCTACACTTGGCACCCTaGACCTCTCTCATCCCACCTTTCCCTAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: DLTLSQSLHLAP*TSLIPPFPRPR
Trigger: CCTCGGCCTAGGGAAAGGTGGGATGAGAGAGGTCAAGGGTGCCAAGTGTAGAGACTGGGACAGCGTCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 72 bp TTCACAGTTCTTCTTCCCACCAGTCTGCACTCCTGGTaGGCAAAGACTGGAAGGGCCCCTGCGGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FTVLLPTSLHSW*AKTGRAPAGGG
Trigger: TCCTCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS GCA 72 bp GGTCCTGAGGGTACCAGTAGTCAGGGACCTTATATTTaGGCGTCAGGTAGAGCAGGATGGCCACACTCTCCG +
Preference number: 6 (lower is better)
Translates to: GPEGTSSQGPYI*ASGRAGWPHSP
Trigger: CGGAGAGTGTGGCCATCCTGCTCTACCTGACGCGCAAATATAAGGTCCCTGACTACTGGTACCCTCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612885.3
ENST00000628465.1
CDS CCA 72 bp AGGAAGGAAGGGACAAAGAGGGACCCCAATGCAGACTaGACGAGTGCAGAGGGCAGGGATGGAAAGTCACGT +
Preference number: 6 (lower is better)
Translates to: RKEGTKRDPNAD*TSAEGRDGKSR
Trigger: ACGTGACTTTCCATCCCTGCCCTCTGCACTCGTCCAGTCTGCATTGGGGTCCCTCTTTGTCCCTTCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CCA 72 bp AGTTTCACAGTTCTTCTTCCCACCAGTCTGCACTCCTaGTTGGCAAAGACTGGAAGGGCCCCTGCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: SFTVLLPTSLHS*LAKTGRAPAGG
Trigger: TCCTCCCGCAGGGGCCCTTCCAGTCTTTGCCAACCAGGAGTGCAGACTGGTGGGAAGAAGAACTGTGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 72 bp CCACTCCACCGGCTGGTACAAAATAGACAACACCCCTaGCTAAGTCCTGTAGGCACAGCCTCCTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: PLHRLVQNRQHP*LSPVGTASSHR
Trigger: CCTGTGGGAGGAGGCTGTGCCTACAGGACTTAGCAAGGGGTGTTGTCTATTTTGTACCAGCCGGTGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 90 bp CTCCACACTCTGCAGAGGAAGTCCTTGCGCAGGACAGTGGGCAGTTaGCAGAAGAGATTATGTGGAGAAGTTTCAGGCAGAGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: LHTLQRKSLRRTVGS*QKRLCGEVSGRGPA
Trigger: GGCTGGCCCTCTGCCTGAAACTTCTCCACATAATCTCTTCTGCAAACTGCCCACTGTCCTGCGCAAGGACTTCCTCTGCAGAGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS TCA 72 bp GGAGAATTGCTTGAACCCGGGAGGTGGTGGTTGCAGTaGTTCGAGATCCGTGCCACTGCACTGCAACAAAGC +
Preference number: 6 (lower is better)
Translates to: GELLEPGRWWLQ*FEIRATALQQS
Trigger: GCTTTGTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTCCCGGGTTCAAGCAATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625361.1
ENST00000630911.1
CDS GCA 72 bp GAAGGTGGCGCTGGGAGAAGTTCCCTAAGCTATGTATaGCTACCTGTCCCCTTCCTGACTTTTCGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: EGGAGRSSLSYV*LPVPFLTFRFP
Trigger: GGGGAACCGAAAAGTCAGGAAGGGGACAGGTAGGCATACATAGCTTAGGGAACTTCTCCCAGCGCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS GCA 72 bp AAGCAGGAGAATTGCTTGAACCCGGGAGGTGGTGGTTaGAGTGATTCGAGATCCGTGCCACTGCACTGCAAC +
Preference number: 6 (lower is better)
Translates to: KQENCLNPGGGG*SDSRSVPLHCN
Trigger: GTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTCCCGGGTTCAAGCAATTCTCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625361.1
ENST00000630911.1
CDS CAA 90 bp GTGCAGAGGGCAGGGATGGAAAGTCACGTCCTGAGCTGTTTGCTGTaGCAGAATCTCAGCAGCTGGGCCATAAAGAAGGGACTTGACGCT +
Preference number: 6 (lower is better)
Translates to: VQRAGMESHVLSCLL*QNLSSWAIKKGLDA
Trigger: AGCGTCAAGTCCCTTCTTTATGGCCCAGCTGCTGAGATTCTGCAACAGCAAACAGCTCAGGACGTGACTTTCCATCCCTGCCCTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 90 bp GGACGAGTGCAGAGGGCAGGGATGGAAAGTCACGTCCTGAGCTGTTaGCTGTTGCAGAATCTCAGCAGCTGGGCCATAAAGAAGGGACTT +
Preference number: 6 (lower is better)
Translates to: GRVQRAGMESHVLSC*LLQNLSSWAIKKGL
Trigger: AAGTCCCTTCTTTATGGCCCAGCTGCTGAGATTCTGCAACAGCAAACAGCTCAGGACGTGACTTTCCATCCCTGCCCTCTGCACTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS TCA 72 bp TATCCACTCTCATCTGCTGGGATTCCGACCAGCCTCTaGTGGCCTGACTGTTCAAAAAGGCTTCCGTGTCCC +
Preference number: 6 (lower is better)
Translates to: YPLSSAGIPTSL*WPDCSKRLPCP
Trigger: GGGACACGGAAGCCTTTTTGAACAGTCAGGCCATCAGAGGCTGGTCGGAATCCCAGCAGATGAGAGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 72 bp ACCCGGGAGGTGGTGGTTGCAGTGATTCGAGATCCGTaGCACTGCACTGCAACAAAGCAAAAGCAAGACTCT +
Preference number: 6 (lower is better)
Translates to: TREVVVAVIRDP*HCTATKQKQDS
Trigger: AGAGTCTTGCTTTTGCTTTGTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTCCCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625361.1
ENST00000630911.1
CDS GCA 72 bp GAGGTGGTGGTTGCAGTGATTCGAGATCCGTGCCACTaGACTTTAATCAGATCCACGATGCGCAGCTCGAAG +
Preference number: 6 (lower is better)
Translates to: EVVVAVIRDPCH*TLIRSTMRSSK
Trigger: CTTCGAGCTGCGCATCGTGGATCTGATTAAAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000628175.1
CDS CAA 72 bp CAGAGGGCAGGGATGGAAAGTCACGTCCTGAGCTGTTaGCTGTTGCAGAATCTCAGCAGCTGGGCCATAAAG +
Preference number: 6 (lower is better)
Translates to: QRAGMESHVLSC*LLQNLSSWAIK
Trigger: CTTTATGGCCCAGCTGCTGAGATTCTGCAACAGCAAACAGCTCAGGACGTGACTTTCCATCCCTGCCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS TCA 72 bp CTCATCTGCTGGGATTCCGACCAGCCTCTGATGGCCTaGCTGTTCAAAAAGGCTTCCGTGTCCCTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: LICWDSDQPLMA*LFKKASVSLCS
Trigger: AGAACAAAGGGACACGGAAGCCTTTTTGAACAGTCAGGCCATCAGAGGCTGGTCGGAATCCCAGCAGATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CAA 90 bp TCCTCTGTCTCCTGGGAAAACACACTTCCCTCTGCACCACTACATTaGACAACCAGCTTGGACGTCCTCTTGTCCCCCATTCCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: SSVSWENTLPSAPLH*TTSLDVLLSPIPFP
Trigger: AGGAAAGGGAATGGGGGACAAGAGGACGTCCAAGCTGGTTGTCAAATGTAGTGGTGCAGAGGGAAGTGTGTTTTCCCAGGAGACAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CAA 90 bp AGCACCCCAAGCTGCACGATAGGTCACCTGAGGGGACTGACTACCTaGTCCCTTCCACCATTAATTCTAAGGCAGGGTCATGAAACACAG +
Preference number: 6 (lower is better)
Translates to: STPSCTIGHLRGLTT*SLPPLILRQGHETQ
Trigger: CTGTGTTTCATGACCCTGCCTTAGAATTAATGGTGGAAGGGACAAGGTAGTCAGTCCCCTCAGGTGACCTATCGTGCAGCTTGGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS CAA 90 bp TGGGAAAACACACTTCCCTCTGCACCACTACATTTGACAACCAGCTaGGACGTCCTCTTGTCCCCCATTCCCTTTCCTCTACTCCACACT +
Preference number: 6 (lower is better)
Translates to: WENTLPSAPLHLTTS*DVLLSPIPFPLLHT
Trigger: AGTGTGGAGTAGAGGAAAGGGAATGGGGGACAAGAGGACGTCCAAGCTGGTTGTCAAATGTAGTGGTGCAGAGGGAAGTGTGTTTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS GCA 72 bp GGTCCTGAGGGTACCAGTAGTCAGGGACCTTATATTTaGGCGTCAGGTAGAGCAGGATGGCCACACTTTAAT +
Preference number: 6 (lower is better)
Translates to: GPEGTSSQGPYI*ASGRAGWPHFN
Trigger: ATTAAAGTGTGGCCATCCTGCTCTACCTGACGCGCAAATATAAGGTCCCTGACTACTGGTACCCTCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621513.3
CDS GCA 72 bp AAGCAGGAGAATTGCTTGAACCCGGGAGGTGGTGGTTaGAGTGATTCGAGATCCGTGCCACTGCACTTTAAT +
Preference number: 6 (lower is better)
Translates to: KQENCLNPGGGG*SDSRSVPLHFN
Trigger: ATTAAAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTCCCGGGTTCAAGCAATTCTCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000628175.1
CDS CAA 72 bp CTGCAGAGGAAGTCCTTGCGCAGGACAGTGGGCAGTTaGCAGAAGAGATTATGTGGAGAAGTTTCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: LQRKSLRRTVGS*QKRLCGEVSGR
Trigger: TCTGCCTGAAACTTCTCCACATAATCTCTTCTGCAAACTGCCCACTGTCCTGCGCAAGGACTTCCTCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CAA 72 bp ACACTTCCCTCTGCACCACTACATTTGACAACCAGCTaGGACGTCCTCTTGTCCCCCATTCCCTTTCCTCTA +
Preference number: 6 (lower is better)
Translates to: TLPSAPLHLTTS*DVLLSPIPFPL
Trigger: TAGAGGAAAGGGAATGGGGGACAAGAGGACGTCCAAGCTGGTTGTCAAATGTAGTGGTGCAGAGGGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626730.2
ENST00000630911.1
CDS CAA 72 bp AGCTGCACGATAGGTCACCTGAGGGGACTGACTACCTaGTCCCTTCCACCATTAATTCTAAGGCAGGGTCAT +
Preference number: 6 (lower is better)
Translates to: SCTIGHLRGLTT*SLPPLILRQGH
Trigger: ATGACCCTGCCTTAGAATTAATGGTGGAAGGGACAAGGTAGTCAGTCCCCTCAGGTGACCTATCGTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630911.1
CDS GCA 72 bp GGGCCCTGGCAGAATGTCAGAGGAATTCATCGGAGGTaGGTCCATCCTGAGATTTCAGAGATGAGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: GPWQNVRGIHRR*VHPEISEMSFK
Trigger: TTTAAAGCTCATCTCTGAAATCTCAGGATGGACGCACCTCCGATGAATTCCTCTGACATTCTGCCAGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 72 bp CCAGAGAGAGCTTCCAGGAGAACGGGGCATCAAAGCTaGGCTTTAAAGAAGCTCAGTTCTTTCCATTCGGTA +
Preference number: 6 (lower is better)
Translates to: PERASRRTGHQS*ALKKLSSFHSV
Trigger: TACCGAATGGAAAGAACTGAGCTTCTTTAAAGCTCAGCTTTGATGCCCCGTTCTCCTGGAAGCTCTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 72 bp TCCCACCGTCCGCATTTTAGAGGAGGAGACAGACACTaGATGATTATAGACCCAGAAAGTCTGGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: SHRPHFRGGDRH*MIIDPESLAPK
Trigger: CTTTGGAGCCAGACTTTCTGGGTCTATAATCATTCAGTGTCTGTCTCCTCCTCTAAAATGCGGACGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS GCA 72 bp GAGGTGGTGGTTGCAGTGATTCGAGATCCGTGCCACTaGACTGCAACAAAGCAAAAGCAAGACTCTTTAATC +
Preference number: 6 (lower is better)
Translates to: EVVVAVIRDPCH*TATKQKQDSLI
Trigger: GATTAAAGAGTCTTGCTTTTGCTTTGTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625361.1
CDS CCA 72 bp TGTCCATTTGGAGACACAGAAAAGCTTTCAGGAACTTaGGGTTTCCCAAAGGTTGGGCATGCAGGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: CPFGDTEKLSGT*GFPKVGHAGQK
Trigger: CTTTTGGCCTGCATGCCCAACCTTTGGGAAACCCCAAGTTCCTGAAAGCTTTTCTGTGTCTCCAAATGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CCA 72 bp AAGAATCAGCTCCTATCTAAGCTGACTGGGGTAGTTTaGCTTCCTAAAGTACCACTCAGGAAGCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: KNQLLSKLTGVV*LPKVPLRKHSC
Trigger: GCAGGAGTGCTTCCTGAGTGGTACTTTAGGAAGCCAAACTACCCCAGTCAGCTTAGATAGGAGCTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CAA 72 bp GTGTCCATTTGGAGACACAGAAAAGCTTTCAGGAACTaGGGGTTTCCCAAAGGTTGGGCATGCAGGCCAAAA +
Preference number: 6 (lower is better)
Translates to: VSIWRHRKAFRN*GFPKGWACRPK
Trigger: TTTTGGCCTGCATGCCCAACCTTTGGGAAACCCCAAGTTCCTGAAAGCTTTTCTGTGTCTCCAAATGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS CAA 90 bp CCAGCCTCTGATGGCCTGACTGTTCAAAAAGGCTTCCGTGTCCCTTaGTTCTTTCTGTCATTCTTTCTGCCAAGAATCAGCTCCTATCTA +
Preference number: 6 (lower is better)
Translates to: PASDGLTVQKGFRVP*FFLSFFLPRISSYL
Trigger: TAGATAGGAGCTGATTCTTGGCAGAAAGAATGACAGAAAGAACAAAGGGACACGGAAGCCTTTTTGAACAGTCAGGCCATCAGAGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS TCA 72 bp TTTCCTGAAGAGGATTCAACTTCTTGGGACCAGCTGTaGTGTAAGACGTCCATATCTGGTGGCTCTTCCATG +
Preference number: 6 (lower is better)
Translates to: FPEEDSTSWDQL*CKTSISGGSSM
Trigger: CATGGAAGAGCCACCAGATATGGACGTCTTACATCACAGCTGGTCCCAAGAAGTTGAATCCTCTTCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630911.1
ENST00000631014.1
CDS GCA 72 bp GGTGGTTGCAGTGATTCGAGATCCGTGCCACTGCACTaGAACAAAGCAAAAGCAAGACTCTTTAATCAGATC +
Preference number: 6 (lower is better)
Translates to: GGCSDSRSVPLH*NKAKARLFNQI
Trigger: GATCTGATTAAAGAGTCTTGCTTTTGCTTTGTTGCAGTGCAGTGGCACGGATCTCGAATCACTGCAACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625361.1
CDS GCA 72 bp GGCTCGCTCATTTCACTTAGCATAATGTCTTCAAGGTaGATCTGTGTTGAAGCGTGTGTCAGAATTTCCCAC +
Preference number: 6 (lower is better)
Translates to: GSLISLSIMSSR*ICVEACVRISH
Trigger: GTGGGAAATTCTGACACACGCTTCAACACAGATGCACCTTGAAGACATTATGCTAAGTGAAATGAGCGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628417.1
CDS TCA 72 bp CTTGTCCCTTCCACCATTAATTCTAAGGCAGGGTCATaGAACACAGAGAAGTGGTCTTTTTCTGGTATCTAC +
Preference number: 6 (lower is better)
Translates to: LVPSTINSKAGS*NTEKWSFSGIY
Trigger: GTAGATACCAGAAAAAGACCACTTCTCTGTGTTTCATGACCCTGCCTTAGAATTAATGGTGGAAGGGACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630911.1