RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000065621

Ensembl transcript IDs: ENST00000338595.7, ENST00000369707.2, ENST00000450629.6, ENST00000467629.1, ENST00000473401.5, ENST00000477078.2, ENST00000498052.1

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCTCCACATCCGGAGCAGATGGTGCGGCAGACTGCCCCTGTCATaGGCTGCCTCTTCTGGAAGTTCTGGCCACCTCACCAAGCAGGCT +
Preference number: 1 (lower is better)
Translates to: GLHIRSRWCGRLPLS*AASSGSSGHLTKQA
Trigger: AGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp CCATGGCAACAGGGCTCCACATCCGGAGCAGATGGTGCGGCAGACTaGCCCTGTCATGCGCTGCCTCTTCTGGAAGTTCTGGCCACCTCA +
Preference number: 1 (lower is better)
Translates to: PWQQGSTSGADGAAD*PCHALPLLEVLATS
Trigger: TGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTGGAGCCCTGTTGCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp GCACCAGCCATCCTCAGCTCTTTGCTGTCTTCAGTGGGGTGGTACTaGCTGGCGAAGCTGGCAGAGGGGCCACATCAGAGACAAGCATCC +
Preference number: 1 (lower is better)
Translates to: APAILSSLLSSVGWY*LAKLAEGPHQRQAS
Trigger: GGATGCTTGTCTCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAGAGCTGAGGATGGCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp CCACATCCGGAGCAGATGGTGCGGCAGACTGCCCCTGTCATGCGCTaGCTCTTCTGGAAGTTCTGGCCACCTCACCAAGCAGGCTTGTTT +
Preference number: 1 (lower is better)
Translates to: PHPEQMVRQTAPVMR*LFWKFWPPHQAGLF
Trigger: AAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp GTGCGGCAGACTGCCCCTGTCATGCGCTGCCTCTTCTGGAAGTTCTaGCCACCTCACCAAGCAGGCTTGTTTCTGTCCAGCTGGCACAGA +
Preference number: 1 (lower is better)
Translates to: VRQTAPVMRCLFWKF*PPHQAGLFLSSWHR
Trigger: TCTGTGCCAGCTGGACAGAAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp GAGCAGATGGTGCGGCAGACTGCCCCTGTCATGCGCTGCCTCTTCTaGAAGTTCTGGCCACCTCACCAAGCAGGCTTGTTTCTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: EQMVRQTAPVMRCLF*KFWPPHQAGLFLSS
Trigger: GCTGGACAGAAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp CAGCCATCCTCAGCTCTTTGCTGTCTTCAGTGGGGTGGTACTGCCTaGCGAAGCTGGCAGAGGGGCCACATCAGAGACAAGCATCCCTAC +
Preference number: 1 (lower is better)
Translates to: QPSSALCCLQWGGTA*RSWQRGHIRDKHPY
Trigger: GTAGGGATGCTTGTCTCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAGAGCTGAGGATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp ACGACCATAGCCAGCTGTCCCAGCCACACAAGCCCTGCCCCATCATaGTCCCTCCTCCCCCTAGCCATGTTAGATTGTAACTGGACTGAG +
Preference number: 1 (lower is better)
Translates to: TTIASCPSHTSPAPS*SLLPLAMLDCNWTE
Trigger: CTCAGTCCAGTTACAATCTAACATGGCTAGGGGGAGGAGGGAGCATGATGGGGCAGGGCTTGTGTGGCTGGGACAGCTGGCTATGGTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp GCCCCATCATGCTCCCTCCTCCCCCTAGCCATGTTAGATTGTAACTaGACTGAGTCCAGGCTAGGCTGTAGCTCAGAACCTCCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: APSCSLLPLAMLDCN*TESRLGCSSEPPRR
Trigger: CCTCCTTGGAGGTTCTGAGCTACAGCCTAGCCTGGACTCAGTCCAGTTACAATCTAACATGGCTAGGGGGAGGAGGGAGCATGATGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp TCAGCTCTTTGCTGTCTTCAGTGGGGTGGTACTGCCTGGCGAAGCTaGCAGAGGGGCCACATCAGAGACAAGCATCCCTACAACAGACAA +
Preference number: 1 (lower is better)
Translates to: SALCCLQWGGTAWRS*QRGHIRDKHPYNRQ
Trigger: TTGTCTGTTGTAGGGATGCTTGTCTCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp AAAACGGTGATTCACAGACCTCACTCAGCATTAACTAGGGTGCCATaGCAACAGGGCTCCACATCCGGAGCAGATGGTGCGGCAGACTGC +
Preference number: 1 (lower is better)
Translates to: KTVIHRPHSALTRVP*QQGSTSGADGAADC
Trigger: GCAGTCTGCCGCACCATCTGCTCCGGATGTGGAGCCCTGTTGCCATGGCACCCTAGTTAATGCTGAGTGAGGTCTGTGAATCACCGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp AAATGGGTCTCCCAGGTGGGCACAGTGTTTGGTGTGTGTGTGTGGTaGGGGATGGGAACTGGAGACTACTCATTGAGAACTGCACTGGGC +
Preference number: 1 (lower is better)
Translates to: KWVSQVGTVFGVCVW*GMGTGDYSLRTALG
Trigger: GCCCAGTGCAGTTCTCAATGAGTAGTCTCCAGTTCCCATCCCCCACCACACACACACACCAAACACTGTGCCCACCTGGGAGACCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp TCCAGTCACAAGACCCTCGGTGTCTCCAGGCCCATGGCCAAAGTTTaGAGAATTACACTCATACTCGCCCACGTGGACAGCGACATTCAT +
Preference number: 1 (lower is better)
Translates to: SSHKTLGVSRPMAKV*RITLILAHVDSDIH
Trigger: ATGAATGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTTGTGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp TTGGAATTCTTTCCAGTCACAAGACCCTCGGTGTCTCCAGGCCCATaGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACA +
Preference number: 1 (lower is better)
Translates to: LEFFPVTRPSVSPGP*PKFGELHSYSPTWT
Trigger: TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTTGTGACTGGAAAGAATTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 90 bp TTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGG +
Preference number: 1 (lower is better)
Translates to: FKEKKERRIGSQDKP*RRLPTSWGILDSEG
Trigger: CCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
3UTR GCA 90 bp ATTGGCTCATGGTTCTGCAGGCTGTATGAGAAGTGTAGTAGATTCTaGTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGC +
Preference number: 1 (lower is better)
Translates to: IGSWFCRLYEKCSRF*FWRALRKLPLMAKS
Trigger: GCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTTCTCATACAGCCTGCAGAACCATGAGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp AACTCAGTTTTCTCTGTGGGTCAGACAAGTGACAAAGAAGCGAGATaGAGGAAGTGTAAGGATGTGCAGGTGACCAGGACCCTGGTAAAC +
Preference number: 1 (lower is better)
Translates to: NSVFSVGQTSDKEAR*RKCKDVQVTRTLVN
Trigger: GTTTACCAGGGTCCTGGTCACCTGCACATCCTTACACTTCCTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp TCATGGTTCTGCAGGCTGTATGAGAAGTGTAGTAGATTCTGCTTCTaGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: SWFCRLYEKCSRFCF*RALRKLPLMAKSKG
Trigger: CCCTTTGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTTCTCATACAGCCTGCAGAACCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 90 bp GATGGGAAAGGATCCAGCATGAGCAAAGCTGAAATGATCACAGGCTaGTCCTCAGACACTGAGATGAAACAGCATTGGACAAACTTGGTC +
Preference number: 1 (lower is better)
Translates to: DGKGSSMSKAEMITG*SSDTEMKQHWTNLV
Trigger: GACCAAGTTTGTCCAATGCTGTTTCATCTCAGTGTCTGAGGATCAGCCTGTGATCATTTCAGCTTTGCTCATGCTGGATCCTTTCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 90 bp AGAGGCATGCCATTTCCTGTTGCATCAGTGGTAACTTTGGTCTTATaGCAAGCACTCACTAGCATGCAGGATTTGTACCGGCAAAAGGCT +
Preference number: 1 (lower is better)
Translates to: RGMPFPVASVVTLVL*QALTSMQDLYRQKA
Trigger: AGCCTTTTGCCGGTACAAATCCTGCATGCTAGTGAGTGCTTGTCATAAGACCAAAGTTACCACTGATGCAACAGGAAATGGCATGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp CCAAACTGGGCTATAGGCCACCAGGCTGCAAACCTCCCCCATGAGTaGTTTTCTCCATTCTATAATTCCTGGTTCTTCAAGCTTTCTAAA +
Preference number: 1 (lower is better)
Translates to: PNWAIGHQAANLPHE*FSPFYNSWFFKLSK
Trigger: TTTAGAAAGCTTGAAGAACCAGGAATTATAGAATGGAGAAAAGCACTCATGGGGGAGGTTTGCAGCCTGGTGGCCTATAGCCCAGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 90 bp TTCAAGTCTGATCATTGGCAGAAGCCTAGTCATAATAGGGTTGCCTaGCATTCACTGAGTTTCACCCAGCTGGTACTAAGCCCTTGCATA +
Preference number: 1 (lower is better)
Translates to: FKSDHWQKPSHNRVA*HSLSFTQLVLSPCI
Trigger: TATGCAAGGGCTTAGTACCAGCTGGGTGAAACTCAGTGAATGGCAGGCAACCCTATTATGACTAGGCTTCTGCCAATGATCAGACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp TGGAAGTTCTGGCCACCTCACCAAGCAGGCTTGTTTCTGTCCAGCTaGCACAGAGTAACACCTGGTAACTATTTACATGGGTCAAAATAT +
Preference number: 1 (lower is better)
Translates to: WKFWPPHQAGLFLSS*HRVTPGNYLHGSKY
Trigger: ATATTTTGACCCATGTAAATAGTTACCAGGTGTTACTCTGTGCCAGCTGGACAGAAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 90 bp CTTTTTACTTATGCAAATTTCTGCAGCCTGCTTGAATTCCTTCCCTaGAAACGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTC +
Preference number: 1 (lower is better)
Translates to: LFTYANFCSLLEFLP*KRALLFYHIAGCKF
Trigger: GAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCGTTTTCAGGGAAGGAATTCAAGCAGGCTGCAGAAATTTGCATAAGTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 90 bp CATCCTTCTAGTTTTATTCAAAGATTGATAACTCAGTTTTCTCTGTaGGTCAGACAAGTGACAAAGAAGCGAGATGGAGGAAGTGTAAGG +
Preference number: 1 (lower is better)
Translates to: HPSSFIQRLITQFSL*VRQVTKKRDGGSVR
Trigger: CCTTACACTTCCTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGTTATCAATCTTTGAATAAAACTAGAAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAGGCATCTCCCATGGTaGGAGCTGGCGCAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALARHLPW*ELAQEG
Trigger: CCCCTCTTGCGCCAGCTCCCACCATGGGAGATGCCT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAGCAGGGAGCATGCCTaGCCAAGAGGCACTCAAATC +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALASREHA*PRGTQI
Trigger: GATTTGAGTGCCTCTTGGCCAGGCATGCTCCCTGCT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 90 bp AGACAGCTCCTTAGGGAGCACAGACAAGGCAAAACATCGCTCCTGTaGCTGCCTGGTGTCTCAGCACAGCTAGGAGGATGGGAAAGGATC +
Preference number: 2 (lower is better)
Translates to: RQLLREHRQGKTSLL*LPGVSAQLGGWERI
Trigger: GATCCTTTCCCATCCTCCTAGCTGTGCTGAGACACCAGGCAGCAACAGGAGCGATGTTTTGCCTTGTCTGTGCTCCCTAAGGAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTACTTTATCCCCAGTGTaGCCCTGGGCTTGGTACACA +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALATLSPV*PWAWYT
Trigger: TGTGTACCAAGCCCAGGGGCACACTGGGGATAAAGT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACACAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACA +
Preference number: 2 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTQAGEF*TAKGWT
Trigger: TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTG...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 90 bp TTCCAGTCACAAGACCCTCGGTGTCTCCAGGCCCATGGCCAAAGTTaGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACATTCA +
Preference number: 2 (lower is better)
Translates to: FQSQDPRCLQAHGQS*ENYTHTRPRGQRHS
Trigger: TGAATGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTTGTGACTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTGAGGTCTTTGGAGGGTaGCATTCTGTAGTGACAAGC +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAEVFGG*HSVVTS
Trigger: GCTTGTCACTACAGAATGGCACCCTCCAAAGACCTC...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCACTGCCTGGCGAAGCTaGCAGAGGGGCCACATCAGA +
Preference number: 2 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGTAWRS*QRGHIR
Trigger: TCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTCCCATGGTGGGAGCTaGCGCAAGAGGGGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRSHGGS*RKRGQG
Trigger: TCCCTGACCCCTCTTGCGCCAGCTCCCACCATGGGA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTGGAAGCTTCCTCTCATaGCAAAAAGCAAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAGSFLS*QKAKGE
Trigger: CTCCCCCTTTGCTTTTTGCCATGAGAGGAAGCTTCC...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTCTGATCCTCAGACACTaGGATGAAACAGCATTGGAC +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALALILRH*DETALD
Trigger: GTCCAATGCTGTTTCATCTCAGTGTCTGAGGATCAG...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTACACCTTCATTTTGGTaGGCCAGAGGCATGCCATTT +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALATPSFW*ARGMPF
Trigger: AAATGGCATGCCTCTGGCTCACCAAAATGAAGGTGT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAAGACTCCCAACAAGCTaGGGAATTCTGGACAGCGAA +
Preference number: 2 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTRLPTS*GILDSE
Trigger: TTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCT...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 90 bp ATGCGCTGCCTCTTCTGGAAGTTCTGGCCACCTCACCAAGCAGGCTaGTTTCTGTCCAGCTGGCACAGAGTAACACCTGGTAACTATTTA +
Preference number: 2 (lower is better)
Translates to: MRCLFWKFWPPHQAG*FLSSWHRVTPGNYL
Trigger: TAAATAGTTACCAGGTGTTACTCTGTGCCAGCTGGACAGAAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGGCGGGAGAATCAACTaGGCCCAGGAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRGGRIN*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAGTTGATTCTCCCGCC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGGGAGAGAGGAGGGCTaGTTTGGGCTGTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNGREEG*FGLSQR
Trigger: CCTCTGAGACAGCCCAAATCAGCCCTCCTCTCTCCC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACATCCGGAGCAGATGGTaGGGCAGACTGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNIRSRW*GRLPLS
Trigger: TGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGAT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAAGCACTCACTAGCATaGAGGATTTGTACCGGCAAA +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAKHSLA*RICTGK
Trigger: TTTGCCGGTACAAATCCTGCATGCTAGTGAGTGCTT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCACACCAGGGAGGTCTTTaGAGGGTGCCATTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAHQGGL*RVPFCS
Trigger: ACTACAGAATGGCACCCTCCAAAGACCTCCCTGGTG...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGGCCAGACTGAGACGTaGGGAGAGAGGAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPGQTET*GERRAD
Trigger: ATCAGCCCTCCTCTCTCCCCACGTCTCAGTCTGGCC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACACATCCGGAGCAGATaGTGCGGCAGACTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKHIRSR*CGRLPL
Trigger: CAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCATGTGGGTCAGACAAGTaGCAAAGAAGCGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: VDSASGEPSGSFLSWQKACGSDK*QRSEME
Trigger: CTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACA...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTTTCTTTATAGCACCATaGGAATGGCCTAATACAGGC +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAFFIAP*EWPNTG
Trigger: GCCTGTATTAGGCCATTCTCATGGTGCTATAAAGAA...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTCTTTCTAAATTAGTGTaGGGAGCCCCAAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALALSKLV*GAPKEN
Trigger: GTTCTCTTTTGGGGCTCCGCACACTAATTTAGAAAG...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGGCCAGACTGAGACGTaGGGAGAGAGGAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKGQTET*GERRAD
Trigger: ATCAGCCCTCCTCTCTCCCCACGTCTCAGTCTGGCC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTGCTTCCCCAGCCATGTaGAATTGTGAGTCAATTAAA +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAASPAM*NCESIK
Trigger: TTTAATTGACTCACAATTCCACATGGCTGGGGAAGC...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTTTTGTGAGACATCCTaGGCCCTGACAGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRFCETS*ALTAPV
Trigger: CACTGGTGCTGTCAGGGCTCAGGATGTCTCACAAAA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACATAACACCTGCCCCTaGCACCCCTACCACCACCAA +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKHNTCP*HPYHHQ
Trigger: TTGGTGGTGGTAGGGGTGGCAGGGGCAGGTGTTATG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACA +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPQAGEF*TAKGWT
Trigger: TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCACCTTTGCTTGTGGCTaGGTTTGGGGCGTGTGTATT +
Preference number: 2 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGTFACG*VWGVCI
Trigger: AATACACACGCCCCAAACCCAGCCACAAGCAAAGGT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGCGAGGCATCTCCCATaGTGGGAGCTGGCGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSARHLP*WELAQE
Trigger: CTCTTGCGCCAGCTCCCACCATGGGAGATGCCTCGC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAATCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGC +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKSQDKP*RRLPTS
Trigger: GCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGA...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCACCTCAGACACTGAGATaGAACAGCATTGGACAAACT +
Preference number: 2 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAPQTLR*NSIGQT
Trigger: AGTTTGTCCAATGCTGTTTCATCTCAGTGTCTGAGG...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCAGCCAGGGCGCATCTTaGATGCTTTGCTGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRSQGAS*MLCCLE
Trigger: TTCTAAGCAGCAAAGCATTCAAGATGCGCCCTGGCT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGAGGTCTTTGGAGGGTaGCATTCTGTAGTGACAAGC +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLREVFGG*HSVVTS
Trigger: GCTTGTCACTACAGAATGGCACCCTCCAAAGACCTC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACCAACGGAATGACCTTTaGTTGTGGCTGGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNQRNDL*LWLGLG
Trigger: CCCCAAACCCAGCCACAAGCAAAGGTCATTCCGTTG...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGGTGAGCCAGAGGCATaGCATTTCCTGTTGCATCAG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNGEPEA*HFLLHQ
Trigger: CTGATGCAACAGGAAATGGCATGCCTCTGGCTCACC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGAGACTCCCAACAAGCTaGGGAATTCTGGACAGCGAA +
Preference number: 2 (lower is better)
Translates to: ELQRKERETDWFPRQAVTRLPTS*GILDSE
Trigger: TTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCT...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
3UTR-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTCATACTCGCCCACGTaGACAGCGACATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRSYSPT*TATFIC
Trigger: GCAAATGAATGTCGCTGTCCACGTGGGCGAGTATGA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 90 bp CTTTCTAAATTAGTGTGCGGAGCCCCAAAAGAGAACACCTTCATTTaGGTGAGCCAGAGGCATGCCATTTCCTGTTGCATCAGTGGTAAC +
Preference number: 2 (lower is better)
Translates to: LSKLVCGAPKENTFI*VSQRHAISCCISGN
Trigger: GTTACCACTGATGCAACAGGAAATGGCATGCCTCTGGCTCACCAAAATGAAGGTGTTCTCTTTTGGGGCTCCGCACACTAATTTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCATCGCTCCTGTTGCTaGCTGGTGTCTCAGCACAGC +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSHRSCC*LVSQHS
Trigger: GCTGTGCTGAGACACCAGGCAGCAACAGGAGCGATG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAAACATCGCTCCTGTTaGTGCCTGGTGTCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKKHRSC*CLVSQH
Trigger: GTGCTGAGACACCAGGCAGCAACAGGAGCGATGTTT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAATGTGGGAGCCACATaGAGGCAGTTTCTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKNVGAT*RQFLQH
Trigger: GTGCTGCAGAAACTGCCTGCATGTGGCTCCCACATT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAAGAAACATAACACCTaGCCCTGCCACCCCTACCAC +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKKKHNT*PCHPYH
Trigger: GTGGTAGGGGTGGCAGGGGCAGGTGTTATGTTTCTT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAGACTCCCAACAAGCTaGGGAATTCTGGACAGCGAA +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNRLPTS*GILDSE
Trigger: TTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTTTTCATTTCCTGCTTTaGAATTCTTTCCAGTCACAA +
Preference number: 2 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAFHFLL*NSFQSQ
Trigger: TTGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAA...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCAGAATGGCTCTGATATaGTTTGGCTGTGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRRMALI*FGCAPP
Trigger: AGGTGGAGCACAGCCAAACCATATCAGAGCCATTCT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACCTGATCCTCAGACACTaGGATGAAACAGCATTGGAC +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNLILRH*DETALD
Trigger: GTCCAATGCTGTTTCATCTCAGTGTCTGAGGATCAG...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACTGCAAACCTCCCCCATaGGTGCTTTTCTCCATTCTA +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNCKPPP*VLFSIL
Trigger: TAGAATGGAGAAAAGCACTCATGGGGGAGGTTTGCA...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGTGGGAGCTAAATCATaGGAACACATGGACATGTGG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNVGAKS*EHMDMW
Trigger: CCACATGTCCATGTGTTCTCATGATTTAGCTCCCAC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGCAGAAGGACATGTTTaGTTCCCCTTCCACCATGAT +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPAEGHV*FPFHHD
Trigger: ATCATGGTGGAAGGGGAAGCAAACATGTCCTTCTGC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGGGTCAGGGAGATGCTaGACACTTTTAAACAACCAG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNGSGRC*TLLNNQ
Trigger: CTGGTTGTTTAAAAGTGTGCAGCATCTCCCTGACCC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGAGATGAAACAGCATTaGACAAACTTGGTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNEMKQH*TNLVPL
Trigger: GAGGGGGACCAAGTTTGTCCAATGCTGTTTCATCTC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCAGAGGAGGGCTGATTTaGGCTGTCTCAGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSRGGLI*AVSEAE
Trigger: CTCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCATTGTTTCTGTCCAGCTaGCACAGAGTAACACCTGGT +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPLFLSS*HRVTPG
Trigger: ACCAGGTGTTACTCTGTGCCAGCTGGACAGAAACAA...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACACCTCCCACCAGCATTaGGGATTACATTTCAACACG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNTSHQH*GLHFNT
Trigger: CGTGTTGAAATGTAATCCCCAATGCTGGTGGGAGGT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCAGGCATTTGTTGAGATaGATTGGAAGAGAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRRHLLR*IGRECD
Trigger: GTCACACTCTCTTCCAATTCATCTCAACAAATGCCT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCCGGTGTTTCATTTCCTaGTTTGGAATTCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGRCFIS*FGILSS
Trigger: ACTGGAAAGAATTCCAAAGCAGGAAATGAAACACCG...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACTCTTCTGCCACCTTGTaGAGAAGGACATGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNSSATL*RRTCLL
Trigger: AAGCAAACATGTCCTTCTGCACAAGGTGGCAGAAGA...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAAGTGTAGTAGATTCTaGTTCTGGAGAGCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKKCSRF*FWRALR
Trigger: CCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGTAATCTCAACACTTTaGAGACCAAGTTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRVISTL*RPSWVD
Trigger: ATCCACCCAACTTGGTCTCCAAAGTGTTGAGATTAC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAAGATTCCCCTCTTCTTaGAGCAAAGATCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPRFPSS*SKDPRK
Trigger: TTTCCTGGGATCTTTGCTCCAAGAAGAGGGGAATCT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAACCTCCCACCAGCATTaGGGATTACATTTCAACACG +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKTSHQH*GLHFNT
Trigger: CGTGTTGAAATGTAATCCCCAATGCTGGTGGGAGGT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGTAACTTTGGTCTTATaGCAAGCACTCACTAGCATG +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNVTLVL*QALTSM
Trigger: CATGCTAGTGAGTGCTTGTCATAAGACCAAAGTTAC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGTGCTAAACCATTCATaGGAAATCTACCCCCATGAT +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPVLNHS*EIYPHD
Trigger: ATCATGGGGGTAGATTTCTCATGAATGGTTTAGCAC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACCATGCCATTTCCTGTTaGATCAGTGGTAACTTTGGT +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNHAISC*ISGNFG
Trigger: ACCAAAGTTACCACTGATGCAACAGGAAATGGCATG...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAACTCAGTTTTCTCTGTaGGTCAGACAAGTGACAAAG +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPTQFSL*VRQVTK
Trigger: CTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGCTTCCCCAGCCATGTaGAATTGTGAGTCAATTAAA +
Preference number: 2 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPASPAM*NCESIK
Trigger: TTTAATTGACTCACAATTCCACATGGCTGGGGAAGC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAACCAGAGGCATTTGTTaGGATGAATTGGAAGAGAGT +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKTRGIC*DELEES
Trigger: ACTCTCTTCCAATTCATCTCAACAAATGCCTCTGGT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACTCTCATGACAGTGAGTaGGTTCTCATGAGATCTAAT +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNSHDSE*VLMRSN
Trigger: ATTAGATCTCATGAGAACTCACTCACTGTCATGAGA...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCTTTCATTTCCTGCTTTaGAATTCTTTCCAGTCACAA +
Preference number: 2 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGFHFLL*NSFQSQ
Trigger: TTGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAA...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTTGTTTCTGTCCAGCTaGCACAGAGTAACACCTGGT +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSLFLSS*HRVTPG
Trigger: ACCAGGTGTTACTCTGTGCCAGCTGGACAGAAACAA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACACTTATGCAAATTTCTaGAGCCTGCTTGAATTCCTT +
Preference number: 2 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNTYANF*SLLEFL
Trigger: AAGGAATTCAAGCAGGCTGCAGAAATTTGCATAAGT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGCTCCTTTTTACTTATaGAAATTTCTGCAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKAPFYL*KFLQPA
Trigger: AGCAGGCTGCAGAAATTTGCATAAGTAAAAAGGAGC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAATGAATCAAGCCATGTaGAACGTAGGACATCTAGTT +
Preference number: 2 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKMNQAM*NVGHLV
Trigger: AACTAGATGTCCTACGTTGCACATGGCTTGATTCAT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCATGTTAGATTGTAACTaGACTGAGTCCAGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSMLDCN*TESRLG
Trigger: GCCTAGCCTGGACTCAGTCCAGTTACAATCTAACAT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGGTGATGAAATAATCTaGATAACAAACCCCATGACG +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSGDEII*ITNPMT
Trigger: CGTCATGGGGTTTGTTATGCAGATTATTTCATCACC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCAAAAAGAGGTTTAATTaGCTCATGGTTCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSKKRFN*LMVLQA
Trigger: AGCCTGCAGAACCATGAGCCAATTAAACCTCTTTTT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp GGTGCCATGGCAACAGGGCTCCACATCCGGAGCAGATaGTGCGGCAGACTGCCCCTGTCATGCGCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: GAMATGLHIRSR*CGRLPLSCAAS
Trigger: AGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTGGAGCCCTGTTGCCATGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GCCATGGCAACAGGGCTCCACATCCGGAGCAGATGGTaGGGCAGACTGCCCCTGTCATGCGCTGCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: AMATGLHIRSRW*GRLPLSCAASS
Trigger: AGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTGGAGCCCTGTTGCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp GCAAAGGGGGAGCGAGGCATCTCCCATGGTGGGAGCTaGCGCAAGAGGGGTCAGGGAGATGCTGCACACTTT +
Preference number: 3 (lower is better)
Translates to: AKGERGISHGGS*RKRGQGDAAHF
Trigger: AAAGTGTGCAGCATCTCCCTGACCCCTCTTGCGCCAGCTCCCACCATGGGAGATGCCTCGCTCCCCCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GAGCAGATGGTGCGGCAGACTGCCCCTGTCATGCGCTaGCTCTTCTGGAAGTTCTGGCCACCTCACCAAGCA +
Preference number: 3 (lower is better)
Translates to: EQMVRQTAPVMR*LFWKFWPPHQA
Trigger: TGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp CAAACTTGGTCCCCCTCCCATAGTGCAGGCAGTAGATaGTCCCAGCCCAAGGGACCTGTTGGCACCAGCCAT +
Preference number: 3 (lower is better)
Translates to: QTWSPSHSAGSR*SQPKGPVGTSH
Trigger: ATGGCTGGTGCCAACAGGTCCCTTGGGCTGGGAGCATCTACTGCCTGCACTATGGGAGGGGGACCAAGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TGCTGTCTTCAGTGGGGTGGTACTGCCTGGCGAAGCTaGCAGAGGGGCCACATCAGAGACAAGCATCCCTAC +
Preference number: 3 (lower is better)
Translates to: CCLQWGGTAWRS*QRGHIRDKHPY
Trigger: GTAGGGATGCTTGTCTCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp GTGCGGCAGACTGCCCCTGTCATGCGCTGCCTCTTCTaGAAGTTCTGGCCACCTCACCAAGCAGGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: VRQTAPVMRCLF*KFWPPHQAGLF
Trigger: AAACAAGCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCTGCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp ATCCTCAGCTCTTTGCTGTCTTCAGTGGGGTGGTACTaGCTGGCGAAGCTGGCAGAGGGGCCACATCAGAGA +
Preference number: 3 (lower is better)
Translates to: ILSSLLSSVGWY*LAKLAEGPHQR
Trigger: TCTCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAGAGCTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp AAGACCCTCGGTGTCTCCAGGCCCATGGCCAAAGTTTaGAGAATTACACTCATACTCGCCCACGTGGACAGC +
Preference number: 3 (lower is better)
Translates to: KTLGVSRPMAKV*RITLILAHVDS
Trigger: GCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp ATTCACAGACCTCACTCAGCATTAACTAGGGTGCCATaGCAACAGGGCTCCACATCCGGAGCAGATGGTGCG +
Preference number: 3 (lower is better)
Translates to: IHRPHSALTRVP*QQGSTSGADGA
Trigger: CGCACCATCTGCTCCGGATGTGGAGCCCTGTTGCCATGGCACCCTAGTTAATGCTGAGTGAGGTCTGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATaGCAAAAAGCAAAGGGGGAGCGAGGCATCTCCCAT +
Preference number: 3 (lower is better)
Translates to: SASGEPSGSFLS*QKAKGERGISH
Trigger: ATGGGAGATGCCTCGCTCCCCCTTTGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp AGAACACATGGACATGTGGAGGGTAACAATACACACTaGGGCCTATCAGAGGGTGCAGGGTGGGAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: RTHGHVEGNNTH*GLSEGAGWEEG
Trigger: TCCCTCCTCCCACCCTGCACCCTCTGATAGGCCTCAGTGTGTATTGTTACCCTCCACATGTCCATGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TGCTCCCTCCTCCCCCTAGCCATGTTAGATTGTAACTaGACTGAGTCCAGGCTAGGCTGTAGCTCAGAACCT +
Preference number: 3 (lower is better)
Translates to: CSLLPLAMLDCN*TESRLGCSSEP
Trigger: AGGTTCTGAGCTACAGCCTAGCCTGGACTCAGTCCAGTTACAATCTAACATGGCTAGGGGGAGGAGGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TCCCAGGTGGGCACAGTGTTTGGTGTGTGTGTGTGGTaGGGGATGGGAACTGGAGACTACTCATTGAGAACT +
Preference number: 3 (lower is better)
Translates to: SQVGTVFGVCVW*GMGTGDYSLRT
Trigger: AGTTCTCAATGAGTAGTCTCCAGTTCCCATCCCCCACCACACACACACACCAAACACTGTGCCCACCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAGAGAGGAGGGCTGATTaGGGCTGTCTCAGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAERRAD*GCLRGR
Trigger: TCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCTC...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TTTCCAGTCACAAGACCCTCGGTGTCTCCAGGCCCATaGCCAAAGTTTGGAGAATTACACTCATACTCGCCC +
Preference number: 3 (lower is better)
Translates to: FPVTRPSVSPGP*PKFGELHSYSP
Trigger: GGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTTGTGACTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGAGAGGAGGGCTGATTaGGGCTGTCTCAGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRERRAD*GCLRGR
Trigger: TCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCTC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp AAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGCTGGGGAATTCTGGAC +
Preference number: 3 (lower is better)
Translates to: KKERRIGSQDKP*RRLPTSWGILD
Trigger: GTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
3UTR CCA 72 bp TTCTCTGTGGGTCAGACAAGTGACAAAGAAGCGAGATaGAGGAAGTGTAAGGATGTGCAGGTGACCAGGACC +
Preference number: 3 (lower is better)
Translates to: FSVGQTSDKEAR*RKCKDVQVTRT
Trigger: GGTCCTGGTCACCTGCACATCCTTACACTTCCTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp GCAGAAGGACATGTTTGCTTCCCCTTCCACCATGATTaGAAGTTTCCTGAGGCTTCCCCAGCCATGTGGAAT +
Preference number: 3 (lower is better)
Translates to: AEGHVCFPFHHD*KFPEASPAMWN
Trigger: ATTCCACATGGCTGGGGAAGCCTCAGGAAACTTTCAATCATGGTGGAAGGGGAAGCAAACATGTCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp TGGTTCTGCAGGCTGTATGAGAAGTGTAGTAGATTCTaGTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATG +
Preference number: 3 (lower is better)
Translates to: WFCRLYEKCSRF*FWRALRKLPLM
Trigger: CATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTTCTCATACAGCCTGCAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCAGCATCAGTCATAGGTaGACCCTGAACCTCAGCATC +
Preference number: 3 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGSISHR*TLNLSI
Trigger: GATGCTGAGGTTCAGGGTCAACCTATGACTGATGCT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTGTTTCATTTCCTGCTTaGGAATTCTTTCCAGTCACA +
Preference number: 3 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAVSFPA*EFFPVT
Trigger: TGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAAC...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCAAAACATCGCTCCTGTaGCTGCCTGGTGTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRKTSLL*LPGVSA
Trigger: TGCTGAGACACCAGGCAGCAACAGGAGCGATGTTTT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GCTATAGGCCACCAGGCTGCAAACCTCCCCCATGAGTaGTTTTCTCCATTCTATAATTCCTGGTTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: AIGHQAANLPHE*FSPFYNSWFFK
Trigger: CTTGAAGAACCAGGAATTATAGAATGGAGAAAAGCACTCATGGGGGAGGTTTGCAGCCTGGTGGCCTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GATCATTGGCAGAAGCCTAGTCATAATAGGGTTGCCTaGCATTCACTGAGTTTCACCCAGCTGGTACTAAGC +
Preference number: 3 (lower is better)
Translates to: DHWQKPSHNRVA*HSLSFTQLVLS
Trigger: GCTTAGTACCAGCTGGGTGAAACTCAGTGAATGGCAGGCAACCCTATTATGACTAGGCTTCTGCCAATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TTCTCCCTCTTCTTAAGCTTTCACCAGGGAGGTCTTTaGAGGGTGCCATTCTGTAGTGACAAGCATCAGTCA +
Preference number: 3 (lower is better)
Translates to: FSLFLSFHQGGL*RVPFCSDKHQS
Trigger: TGACTGATGCTTGTCACTACAGAATGGCACCCTCCAAAGACCTCCCTGGTGAAAGCTTAAGAAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp TGCAGGCTGTATGAGAAGTGTAGTAGATTCTGCTTCTaGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAA +
Preference number: 3 (lower is better)
Translates to: CRLYEKCSRFCF*RALRKLPLMAK
Trigger: TTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTTCTCATACAGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAAGAAAGAGAGACGGATaGGTTCCCAAGACAAGCCGT +
Preference number: 3 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPRKRDG*VPKTSR
Trigger: ACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GTGGGGGATGGGAACTGGAGACTACTCATTGAGAACTaGACTGGGCTGGATATTTGGTTATTTGTGAAGACT +
Preference number: 3 (lower is better)
Translates to: VGDGNWRLLIEN*TGLDIWLFVKT
Trigger: AGTCTTCACAAATAACCAAATATCCAGCCCAGTGCAGTTCTCAATGAGTAGTCTCCAGTTCCCATCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGGAGTTTTTCCCTCTTaGGCTCTGTACTTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRGVFPS*ALYFSL
Trigger: AAGAGAGAAGTACAGAGCCAAAGAGGGAAAAACTCC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp TGGTACACAACAGGCAACCAGAGGCATTTGTTGAGATaGATTGGAAGAGAGTGTGACGCAAATCCAACGGAA +
Preference number: 3 (lower is better)
Translates to: WYTTGNQRHLLR*IGRECDANPTE
Trigger: TTCCGTTGGATTTGCGTCACACTCTCTTCCAATTCATCTCAACAAATGCCTCTGGTTGCCTGTTGTGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp CCATTTCCTGTTGCATCAGTGGTAACTTTGGTCTTATaGCAAGCACTCACTAGCATGCAGGATTTGTACCGG +
Preference number: 3 (lower is better)
Translates to: PFPVASVVTLVL*QALTSMQDLYR
Trigger: CCGGTACAAATCCTGCATGCTAGTGAGTGCTTGTCATAAGACCAAAGTTACCACTGATGCAACAGGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp TATGCAAATTTCTGCAGCCTGCTTGAATTCCTTCCCTaGAAACGGGCTCTTCTTTTCTACCACATAGCTGGC +
Preference number: 3 (lower is better)
Translates to: YANFCSLLEFLP*KRALLFYHIAG
Trigger: GCCAGCTATGTGGTAGAAAAGAAGAGCCCGTTTTCAGGGAAGGAATTCAAGCAGGCTGCAGAAATTTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAAATATGAGCATAGGTaGTTGAAAGCAGCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKKYEHR*LKAARA
Trigger: CGCCCTGGCTGCTTTCAACAACCTATGCTCATATTT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp CCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTaGACAGCGACATTCATTTGCCAAATGGAAGGTATT +
Preference number: 3 (lower is better)
Translates to: PKFGELHSYSPT*TATFICQMEGI
Trigger: AATACCTTCCATTTGGCAAATGAATGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCAGCATCAGTCATAGGTaGACCCTGAACCTCAGCATC +
Preference number: 3 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSSISHR*TLNLSI
Trigger: GATGCTGAGGTTCAGGGTCAACCTATGACTGATGCT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp CTTGGCTCCTTTTTACTTATGCAAATTTCTGCAGCCTaGTTGAATTCCTTCCCTGAAAACGGGCTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: LGSFLLMQISAA*LNSFPENGLFF
Trigger: AAAGAAGAGCCCGTTTTCAGGGAAGGAATTCAAGCAGGCTGCAGAAATTTGCATAAGTAAAAAGGAGCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCATGCAGCCAAGTTCTTaGCTAAAGCATAACAAAAGT +
Preference number: 3 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRMQPSS*LKHNKS
Trigger: ACTTTTGTTATGCTTTAGCAAAGAACTTGGCTGCAT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp AAACAACCAGAACTCATGAGAACTCACTCACTATCATaGGAACAGCACCAAGAGAATGGTGCTAAACCATTC +
Preference number: 3 (lower is better)
Translates to: KQPELMRTHSLS*EQHQENGAKPF
Trigger: GAATGGTTTAGCACCATTCTCTTGGTGCTGTTCTCATGATAGTGAGTGAGTTCTCATGAGTTCTGGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp ATAATTTCTTTGCTCACAAATATGAGCATAGGTTGTTaGAAGCAGCCAGGGCGCATCTTGAATGCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: IISLLTNMSIGC*KQPGRILNALL
Trigger: CAGCAAAGCATTCAAGATGCGCCCTGGCTGCTTTCAACAACCTATGCTCATATTTGTGAGCAAAGAAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACTCAAGAAAGTTAAGTaGCAAAGTCGGAATTTGATC +
Preference number: 3 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKLKKVK*QSRNLI
Trigger: GATCAAATTCCGACTTTGCAACTTAACTTTCTTGAG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR TCA 72 bp ATTTGTGAAGACTTCAGAAAACAAACTAAGCTAGGCTaGTATAAACCACAGGGCAGTCAAGCTTGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: ICEDFRKQTKLG*YKPQGSQACFS
Trigger: TGAGAAGCAAGCTTGACTGCCCTGTGGTTTATATCAGCCTAGCTTAGTTTGTTTTCTGAAGTCTTCACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGACAGCGACATTCATTaGCCAAATGGAAGGTATTTA +
Preference number: 3 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSDSDIH*PNGRYL
Trigger: TAAATACCTTCCATTTGGCAAATGAATGTCGCTGTC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR GCA 72 bp GTGTTTTTAAAAAGAGGTTTAATTGGCTCATGGTTCTaGAGGCTGTATGAGAAGTGTAGTAGATTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: VFLKRGLIGSWF*RLYEKCSRFCF
Trigger: GAAGCAGAATCTACTACACTTCTCATACAGCCTGCAGAACCATGAGCCAATTAAACCTCTTTTTAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CCA 72 bp AGTTTTATTCAAAGATTGATAACTCAGTTTTCTCTGTaGGTCAGACAAGTGACAAAGAAGCGAGATGGAGGA +
Preference number: 3 (lower is better)
Translates to: SFIQRLITQFSL*VRQVTKKRDGG
Trigger: TCCTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGTTATCAATCTTTGAATAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACTCCGGGACTGGCCCTaGGGGCTGGCTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTLRDWP*GLASFP
Trigger: GGGAAAGGAAGCCAGCCCCCAGGGCCAGTCCCGGAG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGGTAGTGGTTGGCTGTaGGACCCCGGCACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTGSGWL*DPGTRL
Trigger: GAGCCGGGTGCCGGGGTCCCACAGCCAACCACTACC...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGGGGCTGGCTTCCTaGAGAGCAGCGATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGWGLAS*RAAMEG
Trigger: CCCCTCCATCGCTGCTCTGCAGGAAGCCAGCCCCCA...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACCAGAGCCGCAGGGCTaGCGTGTGGCTCACACAGTC +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTPEPQG*RVAHTV
Trigger: GACTGTGTGAGCCACACGCCAGCCCTGCGGCTCTGG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACATCCTGCCGGCGCCGGTaGCTGACGAAAGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTSCRRR*LTKEEP
Trigger: CGGTTCCTCTTTCGTCAGCCACCGGCGCCGGCAGGA...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGCCCAGCAGTGCGGCTaGGCCAATGGGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAAQQCG*ANGRPP
Trigger: AGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGC...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAGGCCTAGACGGGGCCTaGCCCTCGCACGTGATCCTA +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRGLDGA*PSHVIL
Trigger: TAGGATCACGTGCGAGGGGCAGGCCCCGTCTAGGCC...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAACTGGCCCTGGGGGCTaGCTTCCTTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRTGPGG*LPFPRV
Trigger: GACCCTGGGGAAAGGAAGCCAGCCCCCAGGGCCAGT...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCCAGAGCCGCAGGGCTaGCGTGTGGCTCACACAGTC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGPEPQG*RVAHTV
Trigger: GACTGTGTGAGCCACACGCCAGCCCTGCGGCTCTGG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCACATCCGGAGCAGATaGTGCGGCAGACTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVHIRSR*CGRLPL
Trigger: CAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGAGGCATCTCCCATGGTaGGAGCTGGCGCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGRHLPW*ELAQEG
Trigger: CCCCTCTTGCGCCAGCTCCCACCATGGGAGATGCCT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAGGAACCGGTAGTGGTTaGCTGTGGGACCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRGTGSG*LWDPGT
Trigger: GGTGCCGGGGTCCCACAGCCAACCACTACCGGTTCC...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450629.6
3UTR CAA 72 bp CCAAGGGACCTGTTGGCACCAGCCATCCTCAGCTCTTaGCTGTCTTCAGTGGGGTGGTACTGCCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PRDLLAPAILSS*LSSVGWYCLAK
Trigger: CTTCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAGAGCTGAGGATGGCTGGTGCCAACAGGTCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGTCCCACTTCATGGCTaGTATCCAGAGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGVPLHG*YPEPQG
Trigger: GCCCTGCGGCTCTGGATATCAGCCATGAAGTGGGAC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGGGAGAGAGGAGGGCTaGTTTGGGCTGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGGREEG*FGLSQR
Trigger: CCTCTGAGACAGCCCAAATCAGCCCTCCTCTCTCCC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCAGCCACACAAGCCCTaGCCCATCATGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVQPHKP*PIMLPP
Trigger: AGGAGGGAGCATGATGGGGCAGGGCTTGTGTGGCTG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGGGATTCGCGGGTCCTaGCGGCGCCGGTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQGIRGS*RRRWLT
Trigger: CGTCAGCCACCGGCGCCGGCAGGACCCGCGAATCCC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAACGGTCGCCGCCCTGTaGCTCGCCACCGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQTVAAL*LATAAA
Trigger: TGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGT...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCTCCGGGACTGGCCCTaGGGGCTGGCTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQALRDWP*GLASFP
Trigger: GGGAAAGGAAGCCAGCCCCCAGGGCCAGTCCCGGAG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR TCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAAGGCCTCTGAGTCTGTaGTGGGAGGGGCTGCCACAA +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRRPLSL*WEGLPQ
Trigger: TTGTGGCAGCCCCTCCCATCACAGACTCAGAGGCCT...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCCTGCCCCTCGCACGTaGTCCTACCCGCCAACTAGC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAPAPRT*SYPPTS
Trigger: GCTAGTTGGCGGGTAGGATCACGTGCGAGGGGCAGG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGGCTCCAGAAACAGCTaGGCTCTGGCGCGCACCCCT +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATGSRNS*ALARTP
Trigger: AGGGGTGCGCGCCAGAGCGCAGCTGTTTCTGGAGCC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338595.7
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGCTTTGGAAGTACCTaGCCAGCAGTGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVSFGST*PAVRLS
Trigger: GCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCT...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCGCAGGGCTGGCGTGTaGCTCACACAGTCCAGTATC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGRRAGV*LTQSSI
Trigger: GATACTGGACTGTGTGAGCCACACGCCAGCCCTGCG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGGCTCCTGTTGCTGCCTaGTGTCTCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVAPVAA*CLSTAR
Trigger: CCTAGCTGTGCTGAGACACCAGGCAGCAACAGGAGC...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACTCCTTACAGGCTCCTaGAGATCGGGATTCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTLLTGS*RSGFAG
Trigger: ACCCGCGAATCCCGATCTCCAGGAGCCTGTAAGGAG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACATCGCTCCTGTTGCTaGCTGGTGTCTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRHRSCC*LVSQHS
Trigger: GCTGTGCTGAGACACCAGGCAGCAACAGGAGCGATG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGCCCCTGTCATGCGCTaGCTCTTCTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGAPVMR*LFWKFW
Trigger: CCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGC...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACATAACACCTGCCCCTaGCACCCCTACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRHNTCP*HPYHHQ
Trigger: TTGGTGGTGGTAGGGGTGGCAGGGGCAGGTGTTATG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAACGGTCGCCGCCCTGTaGCTCGCCACCGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVTVAAL*LATAAA
Trigger: TGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGAAGAGCACAGACTGTaGGGTCCCACTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTEEHRL*GPTSWL
Trigger: CAGCCATGAAGTGGGACCCCACAGTCTGTGCTCTTC...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACATCCCCAGTGTGCCCCTaGGCTTGGTACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTSPVCP*AWYTTG
Trigger: GCCTGTTGTGTACCAAGCCCAGGGGCACACTGGGGA...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAAGAGGAGGGCTGATTTaGGCTGTCTCAGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTRGGLI*AVSEAE
Trigger: CTCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGGCCAGACTGAGACGTaGGGAGAGAGGAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTGQTET*GERRAD
Trigger: ATCAGCCCTCCTCTCTCCCCACGTCTCAGTCTGGCC...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAAGGCATCTCCCATGGTaGGAGCTGGCGCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATRHLPW*ELAQEG
Trigger: CCCCTCTTGCGCCAGCTCCCACCATGGGAGATGCCT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGCGAGGCATCTCCCATaGTGGGAGCTGGCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATARHLP*WELAQE
Trigger: CTCTTGCGCCAGCTCCCACCATGGGAGATGCCTCGC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGTCCCACTTCATGGCTaGTATCCAGAGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAVPLHG*YPEPQG
Trigger: GCCCTGCGGCTCTGGATATCAGCCATGAAGTGGGAC...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR TCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRSQDKP*RRLPTS
Trigger: GCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGATGAGCATAGGTTGTTaGAAGCAGCCAGGGCGCATC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGMSIGC*KQPGRI
Trigger: GATGCGCCCTGGCTGCTTTCAACAACCTATGCTCAT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGTCCTCCTAGGCCTCTaGGTCTGTGATGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQVLLGL*VCDGRG
Trigger: GCCCCTCCCATCACAGACTCAGAGGCCTAGGAGGAC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACTGGAGACTACTCATTaGGAACTGCACTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTLETTH*ELHWAG
Trigger: TCCAGCCCAGTGCAGTTCTCAATGAGTAGTCTCCAG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAACCCGGCTCCGCACCTaGGGGGAAATCCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQTRLRT*GEIRWK
Trigger: TTTCCAGCGGATTTCCCCTCAGGTGCGGAGCCGGGT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGTGGCTCGCCACCGCTaGCGCAGGCTCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQVARHR*RRLQKQ
Trigger: CTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCAC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR GCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGGTCTCCAGGTGGTTTaGGCAGCTCCCGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQGLQVV*AAPGAH
Trigger: GTGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAATCCGGAGCAGATGGTaGGGCAGACTGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATIRSRW*GRLPLS
Trigger: TGACAGGGGCAGTCTGCCGCACCATCTGCTCCGGAT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGAATGTGGGAGCCACATaGAGGCAGTTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGNVGAT*RQFLQH
Trigger: GTGCTGCAGAAACTGCCTGCATGTGGCTCCCACATT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTACATCGCCCCAGATTTaGAAGCCCGAGAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALATSPQI*KPESRS
Trigger: GCTCCTACTCTCGGGCTTCCAAATCTGGGGCGATGT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338595.7
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCTTTCCCCAGGGTCCTaGTCGCATCCCCAGACATGG +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQALSPGS*SHPQTW
Trigger: CCATGTCTGGGGATGCGACCAGGACCCTGGGGAAAG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCACCAGGGAGGTCTTTaGAGGGTGCCATTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVHQGGL*RVPFCS
Trigger: ACTACAGAATGGCACCCTCCAAAGACCTCCCTGGTG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAGAGGAGGGCTGATTTaGGCTGTCTCAGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALARGGLI*AVSEAE
Trigger: CTCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGATGCGCTGCCTCTTCTaGAAGTTCTGGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGMRCLF*KFWPPH
Trigger: GTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCAT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAAGCAGGGAGCATGCCTaGCCAAGAGGCACTCAAATC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRSREHA*PRGTQI
Trigger: GATTTGAGTGCCTCTTGGCCAGGCATGCTCCCTGCT...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp CAAGACCCTCGGTGTCTCCAGGCCCATGGCCAAAGTTaGGAGAATTACACTCATACTCGCCCACGTGGACAG +
Preference number: 4 (lower is better)
Translates to: QDPRCLQAHGQS*ENYTHTRPRGQ
Trigger: CTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGGAGACACCGAGGGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp CTTAGGGAGCACAGACAAGGCAAAACATCGCTCCTGTaGCTGCCTGGTGTCTCAGCACAGCTAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: LREHRQGKTSLL*LPGVSAQLGGW
Trigger: CCATCCTCCTAGCTGTGCTGAGACACCAGGCAGCAACAGGAGCGATGTTTTGCCTTGTCTGTGCTCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGCGGGAGAATCAACTaGGCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAGGRIN*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAGTTGATTCTCCCGCC...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGATCCCAGGAAAACGGTaGTTCACAGACCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGIPGKR*FTDLTQ
Trigger: CTGAGTGAGGTCTGTGAATCACCGTTTTCCTGGGAT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACATGTGGGTCAGACAAGTaGCAAAGAAGCGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTCGSDK*QRSEME
Trigger: CTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACA...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGCCAGGGCGCATCTTaGATGCTTTGCTGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVSQGAS*MLCCLE
Trigger: TTCTAAGCAGCAAAGCATTCAAGATGCGCCCTGGCT...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATTGCCTGCCATTCACTaGGTTTCACCCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRLPAIH*VSPSWY
Trigger: GTACCAGCTGGGTGAAACTCAGTGAATGGCAGGCAA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGGCTCCAGAAACAGCTaGGCTCTGGCGCGCACCCCT +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTGSRNS*ALARTP
Trigger: AGGGGTGCGCGCCAGAGCGCAGCTGTTTCTGGAGCC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR GCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGTGGCTCGCCACCGCTaGCGCAGGCTCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTVARHR*RRLQKQ
Trigger: CTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCAC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGTTCCTGACGCAGGGCTaGCTTCAGATTAGTGCATTC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVFLTQG*LQISAF
Trigger: GAATGCACTAATCTGAAGGCAGCCCTGCGTCAGGAA...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACAACGGAATGACCTTTaGTTGTGGCTGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRQRNDL*LWLGLG
Trigger: CCCCAAACCCAGCCACAAGCAAAGGTCATTCCGTTG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGCCCCTGTCATGCGCTaGCTCTTCTGGAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATAPVMR*LFWKFW
Trigger: CCAGAACTTCCAGAAGAGGCAGCGCATGACAGGGGC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAACTTTCCCCAGGGTCCTaGTCGCATCCCCAGACATGG +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQLSPGS*SHPQTW
Trigger: CCATGTCTGGGGATGCGACCAGGACCCTGGGGAAAG...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGCTACCAGGCACTCCTTaGTCAAATGTGGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGLPGTP*SNVGPY
Trigger: GTAAGGTCCCACATTTGACCAAGGAGTGCCTGGTAG...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACCCAGAGCCGCAGGGCTaGCGTGTGGCTCACACAGTC +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDPEPQG*RVAHTV
Trigger: GACTGTGTGAGCCACACGCCAGCCCTGCGGCTCTGG...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACATGGACAGCGAAGGGGTaGACAGTGAGACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTWTAKG*TVRLST
Trigger: TGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCA...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACACCAGGGAGGTCTTTaGAGGGTGCCATTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRHQGGL*RVPFCS
Trigger: ACTACAGAATGGCACCCTCCAAAGACCTCCCTGGTG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAACCTTTGCTTGTGGCTaGGTTTGGGGCGTGTGTATT +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTTFACG*VWGVCI
Trigger: AATACACACGCCCCAAACCCAGCCACAAGCAAAGGT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTGGGGTGGTACTGCCTaGCGAAGCTGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTWGGTA*RSWQRG
Trigger: GCCCCTCTGCCAGCTTCGCCAGGCAGTACCACCCCA...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCTGTCTTCAGTGGGGTaGTACTGCCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQALSSVG*YCLAKL
Trigger: CAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGGCCAGACTGAGACGTaGGGAGAGAGGAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQGQTET*GERRAD
Trigger: ATCAGCCCTCCTCTCTCCCCACGTCTCAGTCTGGCC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATTAACTAGGGTGCCATaGCAACAGGGCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRLTRVP*QQGSTS
Trigger: GGATGTGGAGCCCTGTTGCCATGGCACCCTAGTTAA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAACTCAAATCCCAAACTaGGCTATAGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTTQIPN*AIGHQA
Trigger: AGCCTGGTGGCCTATAGCCCAGTTTGGGATTTGAGT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGTGGGGGATGGGAACTaGAGACTACTCATTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGVGDGN*RLLIEN
Trigger: GTTCTCAATGAGTAGTCTCCAGTTCCCATCCCCCAC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAATGGGTCTCCCAGGTaGGCACAGTGTTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALANGSPR*AQCLVC
Trigger: ACACACCAAACACTGTGCCCACCTGGGAGACCCATT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTTCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQASQDKP*RRLPTS
Trigger: GCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGA...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR TCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCTGATCCTCAGACACTaGGATGAAACAGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVLILRH*DETALD
Trigger: GTCCAATGCTGTTTCATCTCAGTGTCTGAGGATCAG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCAGCATGAGCAAAGCTaGAATGATCACAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVQHEQS*NDHRLI
Trigger: GATCAGCCTGTGATCATTTCAGCTTTGCTCATGCTG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTATCCCAGGAAAACGGTaGTTCACAGACCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAIPGKR*FTDLTQ
Trigger: CTGAGTGAGGTCTGTGAATCACCGTTTTCCTGGGAT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGACACCTTCATTTTGGTaGGCCAGAGGCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGTPSFW*ARGMPF
Trigger: AAATGGCATGCCTCTGGCTCACCAAAATGAAGGTGT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGTCCTCCTAGGCCTCTaGGTCTGTGATGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTVLLGL*VCDGRG
Trigger: GCCCCTCCCATCACAGACTCAGAGGCCTAGGAGGAC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGCAAAGGTCTCTGAAATaGCTTCAAGGCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGQRSLK*LQGLFP
Trigger: GGGGAAAAGGCCTTGAAGGCATTTCAGAGACCTTTG...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGACATGGTCTCCAGGTaGTTTGCGCAGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGDMVSR*FAQLPE
Trigger: CTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338595.7
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAACTGGCCCTGGGGGCTaGCTTCCTTTCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVTGPGG*LPFPRV
Trigger: GACCCTGGGGAAAGGAAGCCAGCCCCCAGGGCCAGT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTTCATACTCGCCCACGTaGACAGCGACATTCATTTGC +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALASYSPT*TATFIC
Trigger: GCAAATGAATGTCGCTGTCCACGTGGGCGAGTATGA...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGTGTCTCCAGGCCCATaGCCAAAGTTTGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGVSPGP*PKFGEL
Trigger: TAATTCTCCAAACTTTGGCCATGGGCCTGGAGACAC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGGAGATGAAACAGCATTaGACAAACTTGGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVEMKQH*TNLVPL
Trigger: GAGGGGGACCAAGTTTGTCCAATGCTGTTTCATCTC...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCCCCAGAGCCAGCAGATaGCAGGGCCAGACTGAGACG +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRPRASR*QGQTET
Trigger: CGTCTCAGTCTGGCCCTGCCATCTGCTGGCTCTGGG...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACATTAACTAGGGTGCCATaGCAACAGGGCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTLTRVP*QQGSTS
Trigger: GGATGTGGAGCCCTGTTGCCATGGCACCCTAGTTAA...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAAGCAGGGAGCATGCCTaGCCAAGAGGCACTCAAATC +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATSREHA*PRGTQI
Trigger: GATTTGAGTGCCTCTTGGCCAGGCATGCTCCCTGCT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCATGGTGGGAGCTaGCGCAAGAGGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDSHGGS*RKRGQG
Trigger: TCCCTGACCCCTCTTGCGCCAGCTCCCACCATGGGA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGGAAGCTTCCTCTCATaGCAAAAAGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGGSFLS*QKAKGE
Trigger: CTCCCCCTTTGCTTTTTGCCATGAGAGGAAGCTTCC...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACTCCAAGAAACAATGTaGGAGCCACATGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRLQETM*EPHAGS
Trigger: ACTGCCTGCATGTGGCTCCCACATTGTTTCTTGGAG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGTGCGGCTGAGCCAATaGGCGGCCTCCTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDVRLSQ*AASLQA
Trigger: AGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCAC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR TCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGGCGGGAGAATCAACTaGGCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGGGRIN*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAGTTGATTCTCCCGCC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAAATGATCACAGGCTaGTCCTCAGACACTGAGATG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGEMITG*SSDTEM
Trigger: CATCTCAGTGTCTGAGGATCAGCCTGTGATCATTTC...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTTGCAAACCTCCCCCATaGGTGCTTTTCTCCATTCTA +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALACKPPP*VLFSIL
Trigger: TAGAATGGAGAAAAGCACTCATGGGGGAGGTTTGCA...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAAGCCAGGGCGCATCTTaGATGCTTTGCTGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTSQGAS*MLCCLE
Trigger: TTCTAAGCAGCAAAGCATTCAAGATGCGCCCTGGCT...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGAGGCCTCTGAGTCTGTaGTGGGAGGGGCTGCCACAA +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTRPLSL*WEGLPQ
Trigger: TTGTGGCAGCCCCTCCCATCACAGACTCAGAGGCCT...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGCAAACTAAGCTAGGCTaGTATAAACCACAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGQTKLG*YKPQGS
Trigger: ACTGCCCTGTGGTTTATATCAGCCTAGCTTAGTTTG...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACATCGCTCCTGTTGCTaGCTGGTGTCTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQHRSCC*LVSQHS
Trigger: GCTGTGCTGAGACACCAGGCAGCAACAGGAGCGATG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAAACATCGCTCCTGTTaGTGCCTGGTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAKHRSC*CLVSQH
Trigger: GTGCTGAGACACCAGGCAGCAACAGGAGCGATGTTT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAAGCACTCACTAGCATaGAGGATTTGTACCGGCAAA +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVKHSLA*RICTGK
Trigger: TTTGCCGGTACAAATCCTGCATGCTAGTGAGTGCTT...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGGTGAGCCAGAGGCATaGCATTTCCTGTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATGEPEA*HFLLHQ
Trigger: CTGATGCAACAGGAAATGGCATGCCTCTGGCTCACC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACCAGCCACACAAGCCCTaGCCCATCATGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDQPHKP*PIMLPP
Trigger: AGGAGGGAGCATGATGGGGCAGGGCTTGTGTGGCTG...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGGGTCAGGGAGATGCTaGACACTTTTAAACAACCAG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGGSGRC*TLLNNQ
Trigger: CTGGTTGTTTAAAAGTGTGCAGCATCTCCCTGACCC...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTCAAAGGTCTCTGAAATaGCTTCAAGGCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAQRSLK*LQGLFP
Trigger: GGGGAAAAGGCCTTGAAGGCATTTCAGAGACCTTTG...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAAGAAACATAACACCTaGCCCTGCCACCCCTACCAC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAKKHNT*PCHPYH
Trigger: GTGGTAGGGGTGGCAGGGGCAGGTGTTATGTTTCTT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCAGGGCAGTCAAGCTTaGTTCTCAACTCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGQGSQA*FSTQSN
Trigger: GTTACTCTGAGTTGAGAAGCAAGCTTGACTGCCCTG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACTACTCATTGAGAACTaGACTGGGCTGGATATTTGG +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTLLIEN*TGLDIW
Trigger: CCAAATATCCAGCCCAGTGCAGTTCTCAATGAGTAG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGTCCAGGACAGGAATGTaGCCAAAAGGGTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGSRTGM*PKGCFV
Trigger: TACAAAGCACCCTTTTGGCCACATTCCTGTCCTGGA...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACCGCAGGGCTGGCGTGTaGCTCACACAGTCCAGTATC +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDRRAGV*LTQSSI
Trigger: GATACTGGACTGTGTGAGCCACACGCCAGCCCTGCG...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCATGGGGTCCCACTTCATaGCTGATATCCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAWGPTS*LISRAA
Trigger: TGCGGCTCTGGATATCAGCCATGAAGTGGGACCCCA...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACACTGCCTGGCGAAGCTaGCAGAGGGGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDTAWRS*QRGHIR
Trigger: TCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCCTGTCTTCAGTGGGGTaGTACTGCCTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGLSSVG*YCLAKL
Trigger: CAGCTTCGCCAGGCAGTACCACCCCACTGAAGACAG...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAACTTTGCTGTCTTCAGTaGGGTGGTACTGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQLCCLQ*GGTAWR
Trigger: TCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAG...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGCCCAAGGGACCTGTTaGCACCAGCCATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTAQGTC*HQPSSA
Trigger: AGCTGAGGATGGCTGGTGCCAACAGGTCCCTTGGGC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACCCCAGAGCCAGCAGATaGCAGGGCCAGACTGAGACG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNPRASR*QGQTET
Trigger: CGTCTCAGTCTGGCCCTGCCATCTGCTGGCTCTGGG...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGACCTCCCACCAGCATTaGGGATTACATTTCAACACG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGTSHQH*GLHFNT
Trigger: CGTGTTGAAATGTAATCCCCAATGCTGGTGGGAGGT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAACCTCCCACCAGCATTaGGGATTACATTTCAACACG +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRTSHQH*GLHFNT
Trigger: CGTGTTGAAATGTAATCCCCAATGCTGGTGGGAGGT...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATCCCATGGTGGGAGCTaGCGCAAGAGGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVSHGGS*RKRGQG
Trigger: TCCCTGACCCCTCTTGCGCCAGCTCCCACCATGGGA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGCGAGGCATCTCCCATaGTGGGAGCTGGCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNARHLP*WELAQE
Trigger: CTCTTGCGCCAGCTCCCACCATGGGAGATGCCTCGC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCCCAAATTTAATTTTTaGACTACTGGGCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGPKFNF*TTGLWR
Trigger: CCGCCAGAGCCCAGTAGTTCAAAAATTAAATTTGGG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR TCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGTCCCACTTCATGGCTaGTATCCAGAGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVVPLHG*YPEPQG
Trigger: GCCCTGCGGCTCTGGATATCAGCCATGAAGTGGGAC...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR TCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAATTTTGTGAGACATCCTaGGCCCTGACAGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQFCETS*ALTAPV
Trigger: CACTGGTGCTGTCAGGGCTCAGGATGTCTCACAAAA...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGACCAGAGGCATTTGTTaGGATGAATTGGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVTRGIC*DELEES
Trigger: ACTCTCTTCCAATTCATCTCAACAAATGCCTCTGGT...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGTAACTTTGGTCTTATaGCAAGCACTCACTAGCATG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGVTLVL*QALTSM
Trigger: CATGCTAGTGAGTGCTTGTCATAAGACCAAAGTTAC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCCCTTCCACCATGATTaGAAGTTTCCTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAPFHHD*KFPEAS
Trigger: GGAAGCCTCAGGAAACTTTCAATCATGGTGGAAGGG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACAAACTAAGCTAGGCTaGTATAAACCACAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRQTKLG*YKPQGS
Trigger: ACTGCCCTGTGGTTTATATCAGCCTAGCTTAGTTTG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGAACAGAGGGCTGCTCTaGGGAAGAATAGTATGTAGA +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGNRGLL*GRIVCR
Trigger: TCTACATACTATTCTTCCTCAGAGCAGCCCTCTGTT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTTTCCTGACGCAGGGCTaGCTTCAGATTAGTGCATTC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAFLTQG*LQISAF
Trigger: GAATGCACTAATCTGAAGGCAGCCCTGCGTCAGGAA...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGACTCAGCATCAGCATCTaGACCAATAATCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRLSISI*TNNLEI
Trigger: GATCTCCAGATTATTGGTGCAGATGCTGATGCTGAG...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAACTTTATCCCCAGTGTaGCCCTGGGCTTGGTACACA +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKATLSPV*PWAWYT
Trigger: TGTGTACCAAGCCCAGGGGCACACTGGGGATAAAGT...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCATCAGTGGGGTGGTACTaGCTGGCGAAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPSVGWY*LAKLAE
Trigger: CTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGA...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCACCATCCTCAGCTCTTTaGTGTCTTCAGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAPSSAL*CLQWGG
Trigger: ACCACCCCACTGAAGACAGCAAAGAGCTGAGGATGG...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGATGGTGCGGCAGACTaGCCCTGTCATGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKDGAAD*PCHALP
Trigger: AGGCAGCGCATGACAGGGGCAGTCTGCCGCACCATC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGCATGCCATTTCCTGTTaGATCAGTGGTAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVHAISC*ISGNFG
Trigger: ACCAAAGTTACCACTGATGCAACAGGAAATGGCATG...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGCTTTCTAAATTAGTGTaGGGAGCCCCAAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGLSKLV*GAPKEN
Trigger: GTTCTCTTTTGGGGCTCCGCACACTAATTTAGAAAG...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGGGAGTGTTTTCCCTATaGTTTTCTCATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVGVFSL*FSHDSE
Trigger: CTCACTGTCATGAGAAAAGCATAGGGAAAACACTCC...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGAGGGGTCAGGGAGATaGTGCACACTTTTAAACAAC +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTEGSGR*CTLLNN
Trigger: GTTGTTTAAAAGTGTGCAGCATCTCCCTGACCCCTC...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAAGAAACATAACACCTaGCCCTGCCACCCCTACCAC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQKKHNT*PCHPYH
Trigger: GTGGTAGGGGTGGCAGGGGCAGGTGTTATGTTTCTT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCTACTCATTGAGAACTaGACTGGGCTGGATATTTGG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGLLIEN*TGLDIW
Trigger: CCAAATATCCAGCCCAGTGCAGTTCTCAATGAGTAG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCATAATAGGGTTGCCTaGCATTCACTGAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGHNRVA*HSLSFT
Trigger: GGTGAAACTCAGTGAATGGCAGGCAACCCTATTATG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTCGCATCCCCAGACATaGTCTCCAGGTGGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRSHPQT*SPGGLR
Trigger: GCGCAAACCACCTGGAGACCATGTCTGGGGATGCGA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338595.7
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCGCATCCCCAGACATaGTCTCCAGGTGGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDSHPQT*SPGGLR
Trigger: GCGCAAACCACCTGGAGACCATGTCTGGGGATGCGA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTTCATAAGGGTCATATaGAAACAGCTTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGFIRVI*KQLPSW
Trigger: CCAGGAAGGAAGCTGTTTCCATATGACCCTTATGAA...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCTACCAGGCACTCCTTaGTCAAATGTGGGACCTTAC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQALPGTP*SNVGPY
Trigger: GTAAGGTCCCACATTTGACCAAGGAGTGCCTGGTAG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACGCAGGGCTGGCGTGTaGCTCACACAGTCCAGTATC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPRRAGV*LTQSSI
Trigger: GATACTGGACTGTGTGAGCCACACGCCAGCCCTGCG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGAAGAGCACAGACTGTaGGGTCCCACTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQEEHRL*GPTSWL
Trigger: CAGCCATGAAGTGGGACCCCACAGTCTGTGCTCTTC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAATGGACAGCGAAGGGGTaGACAGTGAGACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQWTAKG*TVRLST
Trigger: TGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCA...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQQAGEF*TAKGWT
Trigger: TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAACTGCCTGGCGAAGCTaGCAGAGGGGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVTAWRS*QRGHIR
Trigger: TCTGATGTGGCCCCTCTGCCAGCTTCGCCAGGCAGT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGAGATGAAACAGCATTaGACAAACTTGGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTEMKQH*TNLVPL
Trigger: GAGGGGGACCAAGTTTGTCCAATGCTGTTTCATCTC...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGGCTTCCCCAGCCATGTaGAATTGTGAGTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGASPAM*NCESIK
Trigger: TTTAATTGACTCACAATTCCACATGGCTGGGGAAGC...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGCTTCCCCAGCCATGTaGAATTGTGAGTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTASPAM*NCESIK
Trigger: TTTAATTGACTCACAATTCCACATGGCTGGGGAAGC...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAATAATCCCCACATGTTaGGGGAGGGACCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQIIPTC*GRDLKG
Trigger: TCCCTTGAGGTCCCTCCCCCAACATGTGGGGATTAT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACACAGTTTCTGCAGCACTaGAGGGATTGCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATQFLQH*RDCSSL
Trigger: CAAGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTG...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCAGCATGAGCAAAGCTaGAATGATCACAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAQHEQS*NDHRLI
Trigger: GATCAGCCTGTGATCATTTCAGCTTTGCTCATGCTG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGTTCTTTATAGCACCATaGGAATGGCCTAATACAGGC +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGFFIAP*EWPNTG
Trigger: GCCTGTATTAGGCCATTCTCATGGTGCTATAAAGAA...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCCTGGAGACTACTCATTaGGAACTGCACTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGLETTH*ELHWAG
Trigger: TCCAGCCCAGTGCAGTTCTCAATGAGTAGTCTCCAG...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAGAGGTCTTTGGAGGGTaGCATTCTGTAGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAEVFGG*HSVVTS
Trigger: GCTTGTCACTACAGAATGGCACCCTCCAAAGACCTC...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACACGGTGTTTCATTTCCTaGTTTGGAATTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTRCFIS*FGILSS
Trigger: ACTGGAAAGAATTCCAAAGCAGGAAATGAAACACCG...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCAAACATCGCTCCTGTTaGTGCCTGGTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGKHRSC*CLVSQH
Trigger: GTGCTGAGACACCAGGCAGCAACAGGAGCGATGTTT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACAGACTGCCCCTGTCATaGGCTGCCTCTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDRLPLS*AASSGS
Trigger: ACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTCATGCCATTTCCTGTTaGATCAGTGGTAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAHAISC*ISGNFG
Trigger: ACCAAAGTTACCACTGATGCAACAGGAAATGGCATG...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAAAGTGTAGTAGATTCTaGTTCTGGAGAGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATKCSRF*FWRALR
Trigger: CCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACACAGGGCAGTCAAGCTTaGTTCTCAACTCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATQGSQA*FSTQSN
Trigger: GTTACTCTGAGTTGAGAAGCAAGCTTGACTGCCCTG...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAATGAATCAAGCCATGTaGAACGTAGGACATCTAGTT +
Preference number: 4 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTMNQAM*NVGHLV
Trigger: AACTAGATGTCCTACGTTGCACATGGCTTGATTCAT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATTCATAAGGGTCATATaGAAACAGCTTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRFIRVI*KQLPSW
Trigger: CCAGGAAGGAAGCTGTTTCCATATGACCCTTATGAA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTGGGGTCCCACTTCATaGCTGATATCCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTWGPTS*LISRAA
Trigger: TGCGGCTCTGGATATCAGCCATGAAGTGGGACCCCA...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTGGGGTCCCACTTCATaGCTGATATCCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDWGPTS*LISRAA
Trigger: TGCGGCTCTGGATATCAGCCATGAAGTGGGACCCCA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGAAAGAGAGACGGATTaGTTCCCAAGACAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQERETD*FPRQAV
Trigger: CACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGTAATCTCAACACTTTaGAGACCAAGTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGVISTL*RPSWVD
Trigger: ATCCACCCAACTTGGTCTCCAAAGTGTTGAGATTAC...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAATCCCCAGTGTGCCCCTaGGCTTGGTACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKSPVCP*AWYTTG
Trigger: GCCTGTTGTGTACCAAGCCCAGGGGCACACTGGGGA...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAGCATTGGACAAACTTaGTCCCCCTCCCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQSIGQT*SPSHSA
Trigger: TGCACTATGGGAGGGGGACCAAGTTTGTCCAATGCT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGCTCCTGTTGCTGCCTaGTGTCTCAGCACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNAPVAA*CLSTAR
Trigger: CCTAGCTGTGCTGAGACACCAGGCAGCAACAGGAGC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGCTCTTCTGGAAGTTCTaGCCACCTCACCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTLFWKF*PPHQAG
Trigger: GCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAG...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACCTCTTCTGGAAGTTCTaGCCACCTCACCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDLFWKF*PPHQAG
Trigger: GCCTGCTTGGTGAGGTGGCCAGAACTTCCAGAAGAG...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGACTCAGTTTTCTCTGTaGGTCAGACAAGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGTQFSL*VRQVTK
Trigger: CTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAAATGGGTCTCCCAGGTaGGCACAGTGTTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQNGSPR*AQCLVC
Trigger: ACACACCAAACACTGTGCCCACCTGGGAGACCCATT...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp GGGTGCCATTCTGTAGTGACAAGCATCAGTCATAGGTaGACCCTGAACCTCAGCATCAGCATCTGCACCAAT +
Preference number: 4 (lower is better)
Translates to: GCHSVVTSISHR*TLNLSISICTN
Trigger: ATTGGTGCAGATGCTGATGCTGAGGTTCAGGGTCAACCTATGACTGATGCTTGTCACTACAGAATGGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp TTAGTGTGCGGAGCCCCAAAAGAGAACACCTTCATTTaGGTGAGCCAGAGGCATGCCATTTCCTGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LVCGAPKENTFI*VSQRHAISCCI
Trigger: GATGCAACAGGAAATGGCATGCCTCTGGCTCACCAAAATGAAGGTGTTCTCTTTTGGGGCTCCGCACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATCTCATGACAGTGAGTaGGTTCTCATGAGATCTAAT +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRSHDSE*VLMRSN
Trigger: ATTAGATCTCATGAGAACTCACTCACTGTCATGAGA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACATGAGCATAGGTTGTTaGAAGCAGCCAGGGCGCATC +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDMSIGC*KQPGRI
Trigger: GATGCGCCCTGGCTGCTTTCAACAACCTATGCTCAT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTTGCCTGCCATTCACTaGGTTTCACCCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRLPAIH*VSPSWY
Trigger: GTACCAGCTGGGTGAAACTCAGTGAATGGCAGGCAA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGCGGTGTTTCATTTCCTaGTTTGGAATTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGRCFIS*FGILSS
Trigger: ACTGGAAAGAATTCCAAAGCAGGAAATGAAACACCG...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGGTGAGCCAGAGGCATaGCATTTCCTGTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRGEPEA*HFLLHQ
Trigger: CTGATGCAACAGGAAATGGCATGCCTCTGGCTCACC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCAGAAGGACATGTTTaGTTCCCCTTCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQAEGHV*FPFHHD
Trigger: ATCATGGTGGAAGGGGAAGCAAACATGTCCTTCTGC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAATGTACTTCTCTCTTCTaGCACCTTGTGCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQCTSLF*HLVQKD
Trigger: GTCCTTCTGCACAAGGTGGCAGAAGAGAGAAGTACA...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCCGAACCTGCACATCCTaGACATGTACCCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGRTCTS*TCTPEL
Trigger: AAGTTCAGGGGTACATGTGCAGGATGTGCAGGTTCG...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGACTTATGCAAATTTCTaGAGCCTGCTTGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGTYANF*SLLEFL
Trigger: AAGGAATTCAAGCAGGCTGCAGAAATTTGCATAAGT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAGCTCCTTTTTACTTATaGAAATTTCTGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRAPFYL*KFLQPA
Trigger: AGCAGGCTGCAGAAATTTGCATAAGTAAAAAGGAGC...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCAATGTGGGAGCCACATaGAGGCAGTTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRNVGAT*RQFLQH
Trigger: GTGCTGCAGAAACTGCCTGCATGTGGCTCCCACATT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGATGAATCAAGCCATGTaGAACGTAGGACATCTAGTT +
Preference number: 4 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGMNQAM*NVGHLV
Trigger: AACTAGATGTCCTACGTTGCACATGGCTTGATTCAT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAACATCGCCCCAGATTTaGAAGCCCGAGAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVTSPQI*KPESRS
Trigger: GCTCCTACTCTCGGGCTTCCAAATCTGGGGCGATGT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGAAAGAGAGACGGATTaGTTCCCAAGACAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGERETD*FPRQAV
Trigger: CACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAAGCATTGGACAAACTTaGTCCCCCTCCCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQSIGQT*SPSHSA
Trigger: TGCACTATGGGAGGGGGACCAAGTTTGTCCAATGCT...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACATGCGCTGCCTCTTCTaGAAGTTCTGGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNMRCLF*KFWPPH
Trigger: GTGAGGTGGCCAGAACTTCCAGAAGAGGCAGCGCAT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCACATCCGGAGCAGATaGTGCGGCAGACTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSHIRSR*CGRLPL
Trigger: CAGGGGCAGTCTGCCGCACCATCTGCTCCGGATGTG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAGAATGGCTCTGATATaGTTTGGCTGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQRMALI*FGCAPP
Trigger: AGGTGGAGCACAGCCAAACCATATCAGAGCCATTCT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTATGTTAGATTGTAACTaGACTGAGTCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAMLDCN*TESRLG
Trigger: GCCTAGCCTGGACTCAGTCCAGTTACAATCTAACAT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAGTAGATTCTGCTTCTaGAGAGCCCTCAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQSRFCF*RALRKL
Trigger: AAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGGTTCTCACTTATAAGTaGGAGCTAAATCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVVLTYK*ELNHEN
Trigger: GTTCTCATGATTTAGCTCCCACTTATAAGTGAGAAC...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTTGTCCATATCACTACTaGCATTTTGGTCACAACCAT +
Preference number: 4 (lower is better)
Translates to: MWEPHAGSFCSTGGIALACPYHY*HFGHNH
Trigger: ATGGTTGTGACCAAAATGCCAGTAGTGATATGGACA...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGTGGGGGATGGGAACTaGAGACTACTCATTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGVGDGN*RLLIEN
Trigger: GTTCTCAATGAGTAGTCTCCAGTTCCCATCCCCCAC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGTGTGTGGTGGGGGATaGGAACTGGAGACTACTCAT +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTVCGGG*ELETTH
Trigger: ATGAGTAGTCTCCAGTTCCCATCCCCCACCACACAC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAACCCAAATTTAATTTTTaGACTACTGGGCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQPKFNF*TTGLWR
Trigger: CCGCCAGAGCCCAGTAGTTCAAAAATTAAATTTGGG...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCATTTTGTGAGACATCCTaGGCCCTGACAGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPFCETS*ALTAPV
Trigger: CACTGGTGCTGTCAGGGCTCAGGATGTCTCACAAAA...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAGGCATTTGTTGAGATaGATTGGAAGAGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQARHLLR*IGRECD
Trigger: GTCACACTCTCTTCCAATTCATCTCAACAAATGCCT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTACCAGAGGCATTTGTTaGGATGAATTGGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQATRGIC*DELEES
Trigger: ACTCTCTTCCAATTCATCTCAACAAATGCCTCTGGT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGAAATGATCACAGGCTaGTCCTCAGACACTGAGATG +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGEMITG*SSDTEM
Trigger: CATCTCAGTGTCTGAGGATCAGCCTGTGATCATTTC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGTAACTTTGGTCTTATaGCAAGCACTCACTAGCATG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATVTLVL*QALTSM
Trigger: CATGCTAGTGAGTGCTTGTCATAAGACCAAAGTTAC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGATGGGAGGATCACTTaGAGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNDGRIT*SQEFKT
Trigger: GGTCTTGAACTCCTGGCTTCAAGTGATCCTCCCATC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACAACGGAATGACCTTTaGTTGTGGCTGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPQRNDL*LWLGLG
Trigger: CCCCAAACCCAGCCACAAGCAAAGGTCATTCCGTTG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTCAGTGGGGTGGTACTaGCTGGCGAAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSSVGWY*LAKLAE
Trigger: CTCTGCCAGCTTCGCCAGGCAGTACCACCCCACTGA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAGACTGCCCCTGTCATaGGCTGCCTCTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKRLPLS*AASSGS
Trigger: ACTTCCAGAAGAGGCAGCGCATGACAGGGGCAGTCT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAAACCTCCCCCATGAGTaGTTTTCTCCATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTNLPHE*FSPFYN
Trigger: ATTATAGAATGGAGAAAAGCACTCATGGGGGAGGTT...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATACCACATAGCTGGCTaGAAATTCTCCAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRYHIAG*KFSKLL
Trigger: TAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGAAGAGCACAGACTGTaGGGTCCCACTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKEEHRL*GPTSWL
Trigger: CAGCCATGAAGTGGGACCCCACAGTCTGTGCTCTTC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACAGACTCCCAACAAGCTaGGGAATTCTGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDRLPTS*GILDSE
Trigger: TTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTCATACTCGCCCACGTaGACAGCGACATTCATTTGC +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTSYSPT*TATFIC
Trigger: GCAAATGAATGTCGCTGTCCACGTGGGCGAGTATGA...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGTTTCATTTCCTGCTTTaGAATTCTTTCCAGTCACAA +
Preference number: 4 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVFHFLL*NSFQSQ
Trigger: TTGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAA...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCACCTTTGCTTGTGGCTaGGTTTGGGGCGTGTGTATT +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRTFACG*VWGVCI
Trigger: AATACACACGCCCCAAACCCAGCCACAAGCAAAGGT...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAATGACCTTTGCTTGTaGCTGGGTTTGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNNDLCL*LGLGRV
Trigger: CACACGCCCCAAACCCAGCCACAAGCAAAGGTCATT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACTTTGCTGTCTTCAGTaGGGTGGTACTGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKLCCLQ*GGTAWR
Trigger: TCGCCAGGCAGTACCACCCCACTGAAGACAGCAAAG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGCCCAAGGGACCTGTTaGCACCAGCCATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSAQGTC*HQPSSA
Trigger: AGCTGAGGATGGCTGGTGCCAACAGGTCCCTTGGGC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAATTGTTTCTGTCCAGCTaGCACAGAGTAACACCTGGT +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQLFLSS*HRVTPG
Trigger: ACCAGGTGTTACTCTGTGCCAGCTGGACAGAAACAA...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAGATTCCCCTCTTCTTaGAGCAAAGATCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQRFPSS*SKDPRK
Trigger: TTTCCTGGGATCTTTGCTCCAAGAAGAGGGGAATCT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGACTCAAATCCCAAACTaGGCTATAGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTTQIPN*AIGHQA
Trigger: AGCCTGGTGGCCTATAGCCCAGTTTGGGATTTGAGT...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAATAATCCCCACATGTTaGGGGAGGGACCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVIIPTC*GRDLKG
Trigger: TCCCTTGAGGTCCCTCCCCCAACATGTGGGGATTAT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGGAAGCTTCCTCTCATaGCAAAAAGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDGSFLS*QKAKGE
Trigger: CTCCCCCTTTGCTTTTTGCCATGAGAGGAAGCTTCC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTTCACTACTGGCATTTTaGTCACAACCATACAACCAG +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQASLLAF*SQPYNQ
Trigger: CTGGTTGTATGGTTGTGACCAAAATGCCAGTAGTGA...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGTGTGTGGTGGGGGATaGGAACTGGAGACTACTCAT +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVVCGGG*ELETTH
Trigger: ATGAGTAGTCTCCAGTTCCCATCCCCCACCACACAC...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAAGGCATTTGTTGAGATaGATTGGAAGAGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQRHLLR*IGRECD
Trigger: GTCACACTCTCTTCCAATTCATCTCAACAAATGCCT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTGCAAACCTCCCCCATaGGTGCTTTTCTCCATTCTA +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTCKPPP*VLFSIL
Trigger: TAGAATGGAGAAAAGCACTCATGGGGGAGGTTTGCA...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCATGTGGGTCAGACAAGTaGCAAAGAAGCGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPCGSDK*QRSEME
Trigger: CTCCATCTCGCTTCTTTGTCACTTGTCTGACCCACA...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGATGGGAGGATCACTTaGAGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKDGRIT*SQEFKT
Trigger: GGTCTTGAACTCCTGGCTTCAAGTGATCCTCCCATC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACTTGAATTCCTTCCCTaGAAACGGGCTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQLEFLP*KRALLF
Trigger: GAAAAGAAGAGCCCGTTTTCAGGGAAGGAATTCAAG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTGCCACAAAGGTCTCTaGAATGCCTTCAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTCHKGL*NAFKAF
Trigger: AAAGGCCTTGAAGGCATTTCAGAGACCTTTGTGGCA...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACCAGGCTCCCAAAATGTaGTCTGACATTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNQAPKM*SDISTR
Trigger: CCTGGTGCTAATGTCAGAGCACATTTTGGGAGCCTG...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGAGGTCTTTGGAGGGTaGCATTCTGTAGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPEVFGG*HSVVTS
Trigger: GCTTGTCACTACAGAATGGCACCCTCCAAAGACCTC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAACTTTATCCCCAGTGTaGCCCTGGGCTTGGTACACA +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKTLSPV*PWAWYT
Trigger: TGTGTACCAAGCCCAGGGGCACACTGGGGATAAAGT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAACCTCCCCCATGAGTaGTTTTCTCCATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQANLPHE*FSPFYN
Trigger: ATTATAGAATGGAGAAAAGCACTCATGGGGGAGGTT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAATCTTCTGCCACCTTGTaGAGAAGGACATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQSSATL*RRTCLL
Trigger: AAGCAAACATGTCCTTCTGCACAAGGTGGCAGAAGA...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCGGGTCAGGGAGATGCTaGACACTTTTAAACAACCAG +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRGSGRC*TLLNNQ
Trigger: CTGGTTGTTTAAAAGTGTGCAGCATCTCCCTGACCC...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACAAGTGTAGTAGATTCTaGTTCTGGAGAGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDKCSRF*FWRALR
Trigger: CCTGAGGGCTCTCCAGAAGCAGAATCTACTACACTT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACGAACCTGCACATCCTaGACATGTACCCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPRTCTS*TCTPEL
Trigger: AAGTTCAGGGGTACATGTGCAGGATGTGCAGGTTCG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAGGTGATGAAATAATCTaGATAACAAACCCCATGACG +
Preference number: 4 (lower is better)
Translates to: PWPKFGELHSYSPTWTATGDEII*ITNPMT
Trigger: CGTCATGGGGTTTGTTATGCAGATTATTTCATCACC...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAGCACTGGAGGGATTaGTCTAGCTTGTACTTTATG +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQQHWRD*SSLYFM
Trigger: CATAAAGTACAAGCTAGAGCAATCCCTCCAGTGCTG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCATAACACCTGCCCCTaGCACCCCTACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSHNTCP*HPYHHQ
Trigger: TTGGTGGTGGTAGGGGTGGCAGGGGCAGGTGTTATG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACATGCAAGATTTCAGAATaGACAGTATTAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTCKISE*TVLNLA
Trigger: GGCCAAGTTTAATACTGTGCATTCTGAAATCTTGCA...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGAAAGAGAGACGGATTaGTTCCCAAGACAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNERETD*FPRQAV
Trigger: CACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGTGTCTCCAGGCCCATaGCCAAAGTTTGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTVSPGP*PKFGEL
Trigger: TAATTCTCCAAACTTTGGCCATGGGCCTGGAGACAC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAGAGTTTTTCCCTCTTTaGCTCTGTACTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAEFFPL*LCTSLF
Trigger: GAAGAGAGAAGTACAGAGCCAAAGAGGGAAAAACTC...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAAAAAGAGGTTTAATTaGCTCATGGTTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAKKRFN*LMVLQA
Trigger: AGCCTGCAGAACCATGAGCCAATTAAACCTCTTTTT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAATCACCTCCTCAGCCTaGCCTTCACTGTCCATATCA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVITSSA*PSLSIS
Trigger: TGATATGGACAGTGAAGGCCAGGCTGAGGAGGTGAT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACTCCAAGAAACAATGTaGGAGCCACATGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPLQETM*EPHAGS
Trigger: ACTGCCTGCATGTGGCTCCCACATTGTTTCTTGGAG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACCAATCCTCAAAGCTTTaGAAGTACCTGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDQSSKL*KYLPSS
Trigger: ACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTG...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR TCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTCCCAAGACAAGCCGTaGCGTAGACTCCCAACAAGC +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSSQDKP*RRLPTS
Trigger: GCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTACTGATCCTCAGACACTaGGATGAAACAGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVLILRH*DETALD
Trigger: GTCCAATGCTGTTTCATCTCAGTGTCTGAGGATCAG...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACACACCTTCATTTTGGTaGGCCAGAGGCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNTPSFW*ARGMPF
Trigger: AAATGGCATGCCTCTGGCTCACCAAAATGAAGGTGT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCTTCTTTATAGCACCATaGGAATGGCCTAATACAGGC +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGFFIAP*EWPNTG
Trigger: GCCTGTATTAGGCCATTCTCATGGTGCTATAAAGAA...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGTGCTAAACCATTCATaGGAAATCTACCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQVLNHS*EIYPHD
Trigger: ATCATGGGGGTAGATTTCTCATGAATGGTTTAGCAC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGTGGGAGCTAAATCATaGGAACACATGGACATGTGG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPVGAKS*EHMDMW
Trigger: CCACATGTCCATGTGTTCTCATGATTTAGCTCCCAC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAAAAGAAGAAGATAAATaGAAATGGGTCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAKEEDK*KWVSQV
Trigger: CACCTGGGAGACCCATTTTCATTTATCTTCTTCTTT...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCCTCAGCATCAGCATCTaGACCAATAATCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRLSISI*TNNLEI
Trigger: GATCTCCAGATTATTGGTGCAGATGCTGATGCTGAG...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACTTTCTAAATTAGTGTaGGGAGCCCCAAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQLSKLV*GAPKEN
Trigger: GTTCTCTTTTGGGGCTCCGCACACTAATTTAGAAAG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGCAGAAGGACATGTTTaGTTCCCCTTCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNAEGHV*FPFHHD
Trigger: ATCATGGTGGAAGGGGAAGCAAACATGTCCTTCTGC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGAGGGGTCAGGGAGATaGTGCACACTTTTAAACAAC +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVEGSGR*CTLLNN
Trigger: GTTGTTTAAAAGTGTGCAGCATCTCCCTGACCCCTC...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCCAGCACTGGAGGGATTaGTCTAGCTTGTACTTTATG +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRQHWRD*SSLYFM
Trigger: CATAAAGTACAAGCTAGAGCAATCCCTCCAGTGCTG...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCATCCAGGACAGGAATGTaGCCAAAAGGGTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPSRTGM*PKGCFV
Trigger: TACAAAGCACCCTTTTGGCCACATTCCTGTCCTGGA...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTGGACAGCGAAGGGGTaGACAGTGAGACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSWTAKG*TVRLST
Trigger: TGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSQAGEF*TAKGWT
Trigger: TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAGACTCCCAACAAGCTaGGGAATTCTGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKRLPTS*GILDSE
Trigger: TTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCGTAATCTCAACACTTTaGAGACCAAGTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGVISTL*RPSWVD
Trigger: ATCCACCCAACTTGGTCTCCAAAGTGTTGAGATTAC...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGACAAAGAAGCGAGATaGAGGAAGTGTAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDDKEAR*RKCKDV
Trigger: CACATCCTTACACTTCCTCCATCTCGCTTCTTTGTC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAACTCAGTTTTCTCTGTaGGTCAGACAAGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQTQFSL*VRQVTK
Trigger: CTTTGTCACTTGTCTGACCCACAGAGAAAACTGAGT...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAAGTAGATTCTGCTTCTaGAGAGCCCTCAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPSRFCF*RALRKL
Trigger: AAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTACT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCTCACTACTGGCATTTTaGTCACAACCATACAACCAG +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGSLLAF*SQPYNQ
Trigger: CTGGTTGTATGGTTGTGACCAAAATGCCAGTAGTGA...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAATCACCTCCTCAGCCTaGCCTTCACTGTCCATATCA +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKITSSA*PSLSIS
Trigger: TGATATGGACAGTGAAGGCCAGGCTGAGGAGGTGAT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACAGTTTCTGCAGCACTaGAGGGATTGCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKQFLQH*RDCSSL
Trigger: CAAGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTTTCAAGTCTGATCATTaGCAGAAGCCTAGTCATAAT +
Preference number: 4 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAFKSDH*QKPSHN
Trigger: ATTATGACTAGGCTTCTGCCAATGATCAGACTTGAA...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTACCTCAGACACTGAGATaGAACAGCATTGGACAAACT +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVPQTLR*NSIGQT
Trigger: AGTTTGTCCAATGCTGTTTCATCTCAGTGTCTGAGG...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGTGCTAAACCATTCATaGGAAATCTACCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDVLNHS*EIYPHD
Trigger: ATCATGGGGGTAGATTTCTCATGAATGGTTTAGCAC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGTGGGAGCTAAATCATaGGAACACATGGACATGTGG +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKVGAKS*EHMDMW
Trigger: CCACATGTCCATGTGTTCTCATGATTTAGCTCCCAC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACTTGAATTCCTTCCCTaGAAACGGGCTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPLEFLP*KRALLF
Trigger: GAAAAGAAGAGCCCGTTTTCAGGGAAGGAATTCAAG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAATGCCACAAAGGTCTCTaGAATGCCTTCAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKCHKGL*NAFKAF
Trigger: AAAGGCCTTGAAGGCATTTCAGAGACCTTTGTGGCA...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAACAGAGGGCTGCTCTaGGGAAGAATAGTATGTAGA +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNNRGLL*GRIVCR
Trigger: TCTACATACTATTCTTCCTCAGAGCAGCCCTCTGTT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAACAACTCCAAACCATaGATCAAGCCATGTGCAACG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNNNSKP*IKPCAT
Trigger: CGTTGCACATGGCTTGATTCATGGTTTGGAGTTGTT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAAACAACTCCAAACCATaGATCAAGCCATGTGCAACG +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPNNSKP*IKPCAT
Trigger: CGTTGCACATGGCTTGATTCATGGTTTGGAGTTGTT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCCATCCTCAGCTCTTTaGTGTCTTCAGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSPSSAL*CLQWGG
Trigger: ACCACCCCACTGAAGACAGCAAAGAGCTGAGGATGG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAAGCACTCACTAGCATaGAGGATTTGTACCGGCAAA +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNKHSLA*RICTGK
Trigger: TTTGCCGGTACAAATCCTGCATGCTAGTGAGTGCTT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAACTTATGCAAATTTCTaGAGCCTGCTTGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: VDSASGEPSGSFLSWQKATYANF*SLLEFL
Trigger: AAGGAATTCAAGCAGGCTGCAGAAATTTGCATAAGT...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAATGCAAGATTTCAGAATaGACAGTATTAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQCKISE*TVLNLA
Trigger: GGCCAAGTTTAATACTGTGCATTCTGAAATCTTGCA...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAGAATGGCTCTGATATaGTTTGGCTGTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKRMALI*FGCAPP
Trigger: AGGTGGAGCACAGCCAAACCATATCAGAGCCATTCT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAATGTTAGATTGTAACTaGACTGAGTCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPMLDCN*TESRLG
Trigger: GCCTAGCCTGGACTCAGTCCAGTTACAATCTAACAT...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAATGTCCATATCACTACTaGCATTTTGGTCACAACCAT +
Preference number: 4 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQCPYHY*HFGHNH
Trigger: ATGGTTGTGACCAAAATGCCAGTAGTGATATGGACA...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCTTTCTACCACATAGCTaGCTGCAAATTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGFLPHS*LQILQT
Trigger: AGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAA...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp ACACTCATACTCGCCCACGTGGACAGCGACATTCATTaGCCAAATGGAAGGTATTTAGGTTTGGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLILAHVDSDIH*PNGRYLGLECF
Trigger: AAAACACTCCAAACCTAAATACCTTCCATTTGGCAAATGAATGTCGCTGTCCACGTGGGCGAGTATGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp AGCCTGGCCTTCACTGTCCATATCACTACTGGCATTTaGGTCACAACCATACAACCAGTCTCTAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: SLAFTVHITTGI*VTTIQPVSRKF
Trigger: GAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAGTAGTGATATGGACAGTGAAGGCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCCCTTCCACCATGATTaGAAGTTTCCTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSPFHHD*KFPEAS
Trigger: GGAAGCCTCAGGAAACTTTCAATCATGGTGGAAGGG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCTCTCATGACAGTGAGTaGGTTCTCATGAGATCTAAT +
Preference number: 4 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRSHDSE*VLMRSN
Trigger: ATTAGATCTCATGAGAACTCACTCACTGTCATGAGA...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGGTGATGAAATAATCTaGATAACAAACCCCATGACG +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDGDEII*ITNPMT
Trigger: CGTCATGGGGTTTGTTATGCAGATTATTTCATCACC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAACATAATAGGGTTGCCTaGCATTCACTGAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKHNRVA*HSLSFT
Trigger: GGTGAAACTCAGTGAATGGCAGGCAACCCTATTATG...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGAGTTTTTCCCTCTTTaGCTCTGTACTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPEFFPL*LCTSLF
Trigger: GAAGAGAGAAGTACAGAGCCAAAGAGGGAAAAACTC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACAAAAAGAGGTTTAATTaGCTCATGGTTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDKKRFN*LMVLQA
Trigger: AGCCTGCAGAACCATGAGCCAATTAAACCTCTTTTT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCACTGGGCTGGATATTTaGTTATTTGTGAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGTGLDI*LFVKTS
Trigger: TGAAGTCTTCACAAATAACCAAATATCCAGCCCAGT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
3UTR CAA 72 bp GGAGGGATAAAATTGCAGCTTTCAAGGGATCACAGGTaGAGATTAAACCTGCACACAGGAAACAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGIKLQLSRDHR*RLNLHTGNNQK
Trigger: TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAGCTGCAATTTTATCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAAAGAAGAAGATAAATaGAAATGGGTCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNKEEDK*KWVSQV
Trigger: CACCTGGGAGACCCATTTTCATTTATCTTCTTCTTT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGAAGAAGGTGGTGTTCTaGTACTCAAGAATCTTACAA +
Preference number: 4 (lower is better)
Translates to: ELQRKERETDWFPRQAVTKKVVF*YSRILQ
Trigger: TTGTAAGATTCTTGAGTATCAGAACACCACCTTCTT...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR GCA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTACCACATAGCTGGCTaGAAATTCTCCAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDYHIAG*KFSKLL
Trigger: TAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACTTTCTACCACATAGCTaGCTGCAAATTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNFLPHS*LQILQT
Trigger: AGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAA...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR TCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCCTCAGACACTGAGATaGAACAGCATTGGACAAACT +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSPQTLR*NSIGQT
Trigger: AGTTTGTCCAATGCTGTTTCATCTCAGTGTCTGAGG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTCTTCTGCCACCTTGTaGAGAAGGACATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSSSATL*RRTCLL
Trigger: AAGCAAACATGTCCTTCTGCACAAGGTGGCAGAAGA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGACAAAGAAGCGAGATaGAGGAAGTGTAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSDKEAR*RKCKDV
Trigger: CACATCCTTACACTTCCTCCATCTCGCTTCTTTGTC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGTTCTCACTTATAAGTaGGAGCTAAATCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPVLTYK*ELNHEN
Trigger: GTTCTCATGATTTAGCTCCCACTTATAAGTGAGAAC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATTCAAGTCTGATCATTaGCAGAAGCCTAGTCATAAT +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVFKSDH*QKPSHN
Trigger: ATTATGACTAGGCTTCTGCCAATGATCAGACTTGAA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR GCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCGGAGTGTTTTCCCTATaGTTTTCTCATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSGVFSL*FSHDSE
Trigger: CTCACTGTCATGAGAAAAGCATAGGGAAAACACTCC...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCTTCATAAGGGTCATATaGAAACAGCTTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSFIRVI*KQLPSW
Trigger: CCAGGAAGGAAGCTGTTTCCATATGACCCTTATGAA...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATTTCATTTCCTGCTTTaGAATTCTTTCCAGTCACAA +
Preference number: 4 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVFHFLL*NSFQSQ
Trigger: TTGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CCA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAACTGGGCTGGATATTTaGTTATTTGTGAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKTGLDI*LFVKTS
Trigger: TGAAGTCTTCACAAATAACCAAATATCCAGCCCAGT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS GCA 90 bp GCAGCTCCCGGAGCTCACGGTCGCCGCCCTGTGGCTCGCCACCGCTaGCGCAGGCTCCAGAAACAGCTGCGCTCTGGCGCGCACCCCTTG +
Preference number: 5 (lower is better)
Translates to: AAPGAHGRRPVARHR*RRLQKQLRSGAHPL
Trigger: CAAGGGGTGCGCGCCAGAGCGCAGCTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGTGAGCTCCGGGAGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 90 bp TCCAGGTGGTTTGCGCAGCTCCCGGAGCTCACGGTCGCCGCCCTGTaGCTCGCCACCGCTGCCGCAGGCTCCAGAAACAGCTGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SRWFAQLPELTVAAL*LATAAAGSRNSCAL
Trigger: CAGAGCGCAGCTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAACCACCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS GCA 90 bp GGGCGGCCTCCTTACAGGCTCCTGGAGATCGGGATTCGCGGGTCCTaGCGGCGCCGGTGGCTGACGAAAGAGGAACCGGTAGTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: GRPPYRLLEIGIRGS*RRRWLTKEEPVVVG
Trigger: GCCAACCACTACCGGTTCCTCTTTCGTCAGCCACCGGCGCCGGCAGGACCCGCGAATCCCGATCTCCAGGAGCCTGTAAGGAGGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 90 bp CCTTTCCCCAGGGTCCTGGTCGCATCCCCAGACATGGTCTCCAGGTaGTTTGCGCAGCTCCCGGAGCTCACGGTCGCCGCCCTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PFPRVLVASPDMVSR*FAQLPELTVAALWL
Trigger: GAGCCACAGGGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGACCCTGGGGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 90 bp TACAGGCTCCTGGAGATCGGGATTCGCGGGTCCTGCCGGCGCCGGTaGCTGACGAAAGAGGAACCGGTAGTGGTTGGCTGTGGGACCCCG +
Preference number: 5 (lower is better)
Translates to: YRLLEIGIRGSCRRR*LTKEEPVVVGCGTP
Trigger: CGGGGTCCCACAGCCAACCACTACCGGTTCCTCTTTCGTCAGCCACCGGCGCCGGCAGGACCCGCGAATCCCGATCTCCAGGAGCCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 90 bp CCAACTAGCCCCGGCGCCCAGAGCATCAGCCAATCCTCAAAGCTTTaGAAGTACCTGCCCAGCAGTGCGGCTGAGCCAATGGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: PTSPGAQSISQSSKL*KYLPSSAAEPMGGL
Trigger: GAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTGGCTGATGCTCTGGGCGCCGGGGCTAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS GCA 90 bp CCGGCGCCCAGAGCATCAGCCAATCCTCAAAGCTTTGGAAGTACCTaGCCAGCAGTGCGGCTGAGCCAATGGGCGGCCTCCTTACAGGCT +
Preference number: 5 (lower is better)
Translates to: PAPRASANPQSFGST*PAVRLSQWAASLQA
Trigger: AGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTGGCTGATGCTCTGGGCGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 90 bp CCTCAAAGCTTTGGAAGTACCTGCCCAGCAGTGCGGCTGAGCCAATaGGCGGCCTCCTTACAGGCTCCTGGAGATCGGGATTCGCGGGTC +
Preference number: 5 (lower is better)
Translates to: PQSFGSTCPAVRLSQ*AASLQAPGDRDSRV
Trigger: GACCCGCGAATCCCGATCTCCAGGAGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS-3UTR CAA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGTCTCCAGGTGGTTaGCGCAGCTCCCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGWSPGG*RSSRSS
Trigger: TGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCA...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS TCA 90 bp CAGCCAATCCTCAAAGCTTTGGAAGTACCTGCCCAGCAGTGCGGCTaGGCCAATGGGCGGCCTCCTTACAGGCTCCTGGAGATCGGGATT +
Preference number: 5 (lower is better)
Translates to: QPILKALEVPAQQCG*ANGRPPYRLLEIGI
Trigger: AATCCCGATCTCCAGGAGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS TCA 90 bp CTTATCCATGAGAAGAGCACAGACTGTGGGGTCCCACTTCATGGCTaGTATCCAGAGCCGCAGGGCTGGCGTGTGGCTCACACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LIHEKSTDCGVPLHG*YPEPQGWRVAHTVQ
Trigger: CTGGACTGTGTGAGCCACACGCCAGCCCTGCGGCTCTGGATATCAGCCATGAAGTGGGACCCCACAGTCTGTGCTCTTCTCATGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS TCA 90 bp GGAACCAGCAGACTTGGTCCTGTGCTGTGTGCTGAGCTTGACCTCTaGTTCAGCATGGAACCTGGGGCAACTTACCTCCCCTGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: GTSRLGPVLCAELDL*FSMEPGATYLPCKP
Trigger: AGGCTTGCAGGGGAGGTAAGTTGCCCCAGGTTCCATGCTGAATCAGAGGTCAAGCTCAGCACACAGCACAGGACCAAGTCTGCTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CCA 90 bp CCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACAGTGAGACTCAGCACAGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: PKTSRDVDSQQAGEF*TAKGWTVRLSTAQS
Trigger: ACTTTGGGCTGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS CCA 90 bp GACTTGGTCCTGTGCTGTGTGCTGAGCTTGACCTCTGATTCAGCATaGAACCTGGGGCAACTTACCTCCCCTGCAAGCCTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: DLVLCCVLSLTSDSA*NLGQLTSPASLHVL
Trigger: GAGAACATGGAGGCTTGCAGGGGAGGTAAGTTGCCCCAGGTTCCATGCTGAATCAGAGGTCAAGCTCAGCACACAGCACAGGACCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS-3UTR CAA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCTGATGTCTTTGGCCTaGAGGACGAGGCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQALMSLA*RTRRVL
Trigger: CAGGACCCGCCTCGTCCTCAAGGCCAAAGACATCAG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATCATGTCTGATGTCTTaGGCCTTGAGGACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRSCLMS*ALRTRR
Trigger: CCGCCTCGTCCTCAAGGCCAAAGACATCAGACATGA...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCAGCCCAAGGGACCTGTaGGCACCAGCCATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGSPRDL*APAILS
Trigger: GCTGAGGATGGCTGGTGCCAACAGGTCCCTTGGGCT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTCCTCACCAAGCAGGCTaGTTTCTGTCCAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAPHQAG*FLSSWH
Trigger: GTGCCAGCTGGACAGAAACAAGCCTGCTTGGTGAGG...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS TCA 90 bp ACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTaGGACTCAGCACAGCCCAAAGTCAAAGGCATTAGGGTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: TPNKLGNSGQRRGGQ*DSAQPKVKGIRVVL
Trigger: CAGAACAACCCTAATGCCTTTGACTTTGGGCTGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS GCA 90 bp GCTAGCATTAGGAACCCCGCTCAGGATCTCCCATTCTCCAAGATCTaGTTTATCAATAAGAAAGGGGATGCTGCCGGGCCTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ASIRNPAQDLPFSKI*FINKKGDAAGPGGS
Trigger: TGAGCCACCAGGCCCGGCAGCATCCCCTTTCTTATTGATAAAGCAGATCTTGGAGAATGGGAGATCCTGAGCGGGGTTCCTAATGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS-3UTR CAA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTTCATGTCTGATGTCTTaGGCCTTGAGGACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQASCLMS*ALRTRR
Trigger: CCGCCTCGTCCTCAAGGCCAAAGACATCAGACATGA...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp GTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGAAGCATCAGTCATAGGTaGACCCTGAACCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: VDSQQAGEFWTAKGWTVRSISHR*TLNLSI
Trigger: GATGCTGAGGTTCAGGGTCAACCTATGACTGATGCT...TCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGAGCCCAAGGGACCTGTaGGCACCAGCCATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ELQRKERETDWFPRQAVTSPRDL*APAILS
Trigger: GCTGAGGATGGCTGGTGCCAACAGGTCCCTTGGGCT...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGAGAGGAGGGCTGATTaGGGCTGTCTCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQERRAD*GCLRGR
Trigger: TCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCTC...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACAAGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGACTAGCATGCAGGATTaGTACCGGCAAAAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: TSRDVDSQQAGEFWTAKGTSMQD*YRQKAD
Trigger: ATCAGCCTTTTGCCGGTACAAATCCTGCATGCTAGT...CCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAGATGGGAGGATCACTaGAAGCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: MWEPHAGSFCSTGGIALARWEDH*KPGVQD
Trigger: GTCTTGAACTCCTGGCTTCAAGTGATCCTCCCATCT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGAGATGGGAGGATCACTaGAAGCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGRWEDH*KPGVQD
Trigger: GTCTTGAACTCCTGGCTTCAAGTGATCCTCCCATCT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS GCA 90 bp GAGGGAGAACTGAGGCCTCTCTCCTTCTCCCTCTGGTTAGGAGAATaGTTCTTCTCTTTCTCTGAGGTCTCCTCTGCCTCTTTTAGGGTC +
Preference number: 5 (lower is better)
Translates to: EGELRPLSFSLWLGE*FFSFSEVSSASFRV
Trigger: GACCCTAAAAGAGGCAGAGGAGACCTCAGAGAAAGAGAAGAAGCATTCTCCTAACCAGAGGGAGAAGGAGAGAGGCCTCAGTTCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATGGTCTCCAGGTGGTTaGCGCAGCTCCCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVWSPGG*RSSRSS
Trigger: TGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS-3UTR CAA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGCTGATGTCTTTGGCCTaGAGGACGAGGCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ELQRKERETDWFPRQAVTLMSLA*RTRRVL
Trigger: CAGGACCCGCCTCGTCCTCAAGGCCAAAGACATCAG...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAAGATTCATAGATCAGTaGACATTGGCTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTRFIDQ*TLAGLQ
Trigger: CTGGAGACCAGCCAATGTCAACTGATCTATGAATCT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp GACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGTGAGATTCATAGATCAGTaGACATTGGCTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DVDSQQAGEFWTAKGWTVRFIDQ*TLAGLQ
Trigger: CTGGAGACCAGCCAATGTCAACTGATCTATGAATCT...CACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACGGAATGACCTTTGCTaGTGGCTGGGTTTGGGGCGT +
Preference number: 5 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQRNDLC*WLGLGR
Trigger: ACGCCCCAAACCCAGCCACAAGCAAAGGTCATTCCG...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTAAAACATCGCTCCTGTaGCTGCCTGGTGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: KRDGLVPKTSRDVDSQQAKTSLL*LPGVSA
Trigger: TGCTGAGACACCAGGCAGCAACAGGAGCGATGTTTT...AGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGAGAGGAGGGCTGATTaGGGCTGTCTCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQERRAD*GCLRGR
Trigger: TCTGCCTCTGAGACAGCCCAAATCAGCCCTCCTCTC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAGGAGTTTTTCCCTCTTaGGCTCTGTACTTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTGVFPS*ALYFSL
Trigger: AAGAGAGAAGTACAGAGCCAAAGAGGGAAAAACTCC...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTAAATATGAGCATAGGTaGTTGAAAGCAGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAKYEHR*LKAARA
Trigger: CGCCCTGGCTGCTTTCAACAACCTATGCTCATATTT...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS TCA 90 bp TTGCTTCTTCACATGCCAGGCCAGCTTGTTGACTCTGCTGTGGGGTaGTTCAGAGTTGTAGGTAAGGATGTGAGCTTGGGAACCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LLLHMPGQLVDSAVG*FRVVGKDVSLGTSR
Trigger: TCTGCTGGTTCCCAAGCTCACATCCTTACCTACAACTCTGAATCACCCCACAGCAGAGTCAACAAGCTGGCCTGGCATGTGAAGAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS-3UTR CAA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGCGGAATGACCTTTGCTaGTGGCTGGGTTTGGGGCGT +
Preference number: 5 (lower is better)
Translates to: ELQRKERETDWFPRQAVTRNDLC*WLGLGR
Trigger: ACGCCCCAAACCCAGCCACAAGCAAAGGTCATTCCG...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCCCTCACCAAGCAGGCTaGTTTCTGTCCAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRPHQAG*FLSSWH
Trigger: GTGCCAGCTGGACAGAAACAAGCCTGCTTGGTGAGG...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAGAGAACACCTTCATTTaGGTGAGCCAGAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: VDSASGEPSGSFLSWQKAENTFI*VSQRHA
Trigger: GGCATGCCTCTGGCTCACCAAAATGAAGGTGTTCTC...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTGGAGTTTTTCCCTCTTaGGCTCTGTACTTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAGVFPS*ALYFSL
Trigger: AAGAGAGAAGTACAGAGCCAAAGAGGGAAAAACTCC...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACAATTTCAACACGAAATTaGGTGGGGTCTCAGATCCAA +
Preference number: 5 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTISTRN*VGSQIQ
Trigger: TTGGATCTGAGACCCCACCAAATTTCGTGTTGAAAT...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CGTGACGTAGACTCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTGGACATTTCTCAGGTTAATGTaGACCACTTCATGTCTGATG +
Preference number: 5 (lower is better)
Translates to: RDVDSQQAGEFWTAKGWTFLRLM*TTSCLM
Trigger: CATCAGACATGAAGTGGTCAACATTAACCTGAGAAA...TGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAATAGATCAGTTGACATaGGCTGGTCTCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQIDQLT*AGLQDR
Trigger: CCTGTCCTGGAGACCAGCCAATGTCAACTGATCTAT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCAAGCATCAGTCATAGGTaGACCCTGAACCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: VDSASGEPSGSFLSWQKASISHR*TLNLSI
Trigger: GATGCTGAGGTTCAGGGTCAACCTATGACTGATGCT...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAACTAGCATGCAGGATTaGTACCGGCAAAAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: PWPKFGELHSYSPTWTATTSMQD*YRQKAD
Trigger: ATCAGCCTTTTGCCGGTACAAATCCTGCATGCTAGT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAATATAATCCCAGCACTTaGGGATGCCGAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQYNPST*GCRDGR
Trigger: CCTCCCATCTCGGCATCCCAAAGTGCTGGGATTATA...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAAGGGAGGTGATTCGATaGTGGGAGTGTTTTCCCTAT +
Preference number: 5 (lower is better)
Translates to: PWPKFGELHSYSPTWTATREVIR*WECFPY
Trigger: ATAGGGAAAACACTCCCACAATCGAATCACCTCCCT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAATTTCTGCAGCCTGCTaGAATTCCTTCCCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTISAAC*NSFPEN
Trigger: GTTTTCAGGGAAGGAATTCAAGCAGGCTGCAGAAAT...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ATGTGGGAGCCACATGCAGGCAGTTTCTGCAGCACTGGAGGGATTGCTCTAGCTCACTGGGCTGGATATTaGGTTATTTGTGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: MWEPHAGSFCSTGGIALAHWAGY*VICEDF
Trigger: GAAGTCTTCACAAATAACCAAATATCCAGCCCAGTG...AGCTAGAGCAATCCCTCCAGTGCTGCAGAAACTGCCTGCATGTGGCTCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATCATGTCTGATGTCTTaGGCCTTGAGGACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVSCLMS*ALRTRR
Trigger: CCGCCTCGTCCTCAAGGCCAAAGACATCAGACATGA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCTGATGTCTTTGGCCTaGAGGACGAGGCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSLMSLA*RTRRVL
Trigger: CAGGACCCGCCTCGTCCTCAAGGCCAAAGACATCAG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACATAGATCAGTTGACATaGGCTGGTCTCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDIDQLT*AGLQDR
Trigger: CCTGTCCTGGAGACCAGCCAATGTCAACTGATCTAT...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACGAGAACACCTTCATTTaGGTGAGCCAGAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNENTFI*VSQRHA
Trigger: GGCATGCCTCTGGCTCACCAAAATGAAGGTGTTCTC...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACAGCGACAATCACTACTGGCATTTaGGTCACAACCATACAACCA +
Preference number: 5 (lower is better)
Translates to: PWPKFGELHSYSPTWTATITTGI*VTTIQP
Trigger: TGGTTGTATGGTTGTGACCAAAATGCCAGTAGTGAT...TGTCGCTGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAGCTGGGATGCAGCCAAGTTCTTaGCTAAAGCATAACAAAAGT +
Preference number: 5 (lower is better)
Translates to: RDGLVPKTSRDVDSQQAGMQPSS*LKHNKS
Trigger: ACTTTTGTTATGCTTTAGCAAAGAACTTGGCTGCAT...CCCAGCTTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCAAATATGAGCATAGGTaGTTGAAAGCAGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGKYEHR*LKAARA
Trigger: CGCCCTGGCTGCTTTCAACAACCTATGCTCATATTT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAACTGGAGACTACTCATaGAGAACTGCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVTGDYS*RTALGW
Trigger: CCAGCCCAGTGCAGTTCTCAATGAGTAGTCTCCAGT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CGGGCTCTTCTTTTCTACCACATAGCTGGCTGCAAATTCTCCAAACTTTTACGCCGGGGAGGGATAAAATaGCAGCTTTCAAGGGATCAC +
Preference number: 5 (lower is better)
Translates to: RALLFYHIAGCKFSKLLRRGGIK*QLSRDH
Trigger: GTGATCCCTTGAAAGCTGCAATTTTATCCCTCCCCG...GCGTAAAAGTTTGGAGAATTTGCAGCCAGCTATGTGGTAGAAAAGAAGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGGCCAAAAGGGTGCTTaGTATAGTACCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDGQKGA*YSTIQA
Trigger: AGCCTGAATGGTACTATACAAAGCACCCTTTTGGCC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAAGATTCATAGATCAGTaGACATTGGCTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQRFIDQ*TLAGLQ
Trigger: CTGGAGACCAGCCAATGTCAACTGATCTATGAATCT...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAAGAAAGAGAGACGGATaGGTTCCCAAGACAAGCCGT +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVRKRDG*VPKTSR
Trigger: ACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAATATAATCCCAGCACTTaGGGATGCCGAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKYNPST*GCRDGR
Trigger: CCTCCCATCTCGGCATCCCAAAGTGCTGGGATTATA...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CCAGGCCCATGGCCAAAGTTTGGAGAATTACACTCATACTCGCCCACGTGGACACTCAAGAAAGTTAAGTaGCAAAGTCGGAATTTGATC +
Preference number: 5 (lower is better)
Translates to: PGPWPKFGELHSYSPTWTLKKVK*QSRNLI
Trigger: GATCAAATTCCGACTTTGCAACTTAACTTTCTTGAG...TGTCCACGTGGGCGAGTATGAGTGTAATTCTCCAAACTTTGGCCATGGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS TCA 90 bp CCAGTGTGGCATAGAGAAGTCCCCCTGATCATTGTCCTGGAAGTCTaGAAAAACATGTTAGGTGGCATTACCTTGTTCAAGGAAGCTAAC +
Preference number: 5 (lower is better)
Translates to: PVWHREVPLIIVLEV*KNMLGGITLFKEAN
Trigger: GTTAGCTTCCTTGAACAAGGTAATGCCACCTAACATGTTTTTTCAGACTTCCAGGACAATGATCAGGGGGACTTCTCTATGCCACACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS-3UTR CAA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCAGGCCAAAAGGGTGCTTaGTATAGTACCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPGQKGA*YSTIQA
Trigger: AGCCTGAATGGTACTATACAAAGCACCCTTTTGGCC...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAATAGATCAGTTGACATaGGCTGGTCTCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKIDQLT*AGLQDR
Trigger: CCTGTCCTGGAGACCAGCCAATGTCAACTGATCTAT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAAGAAAGAGAGACGGATaGGTTCCCAAGACAAGCCGT +
Preference number: 5 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKRKRDG*VPKTSR
Trigger: ACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTCTGACAAAGGAAACATGGGTAAGGAGACCTGAAGGTGAGAAACCAAGAAACAGGGAGGTGATTCGATaGTGGGAGTGTTTTCCCTAT +
Preference number: 5 (lower is better)
Translates to: TLTKETWVRRPEGEKPRNREVIR*WECFPY
Trigger: ATAGGGAAAACACTCCCACAATCGAATCACCTCCCT...GTTTCTTGGTTTCTCACCTTCAGGTCTCCTTACCCATGTTTCCTTTGTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTGGTAACTATTTACATGGGTCAAAATATACCCAGAGCCAGCAGATGGCAGGGCATCACTACTGGCATTTaGGTCACAACCATACAACCA +
Preference number: 5 (lower is better)
Translates to: LVTIYMGQNIPRASRWQGITTGI*VTTIQP
Trigger: TGGTTGTATGGTTGTGACCAAAATGCCAGTAGTGAT...GCCCTGCCATCTGCTGGCTCTGGGTATATTTTGACCCATGTAAATAGTTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCAAGGGATCACAGGTaGAGATTAAACCTGCACACA +
Preference number: 5 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDSRDHR*RLNLHT
Trigger: TGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGGCCAAAAGGGTGCTTaGTATAGTACCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKGQKGA*YSTIQA
Trigger: AGCCTGAATGGTACTATACAAAGCACCCTTTTGGCC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAAGTTTCATTTCCTGCTTaGGAATTCTTTCCAGTCACA +
Preference number: 5 (lower is better)
Translates to: KRKRDGLVPKTSRDVDSQVSFPA*EFFPVT
Trigger: TGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAAC...TTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTCCCAACAAATGCAGCCAAGTTCTTaGCTAAAGCATAACAAAAGT +
Preference number: 5 (lower is better)
Translates to: RKRDGLVPKTSRDVDSQQMQPSS*LKHNKS
Trigger: ACTTTTGTTATGCTTTAGCAAAGAACTTGGCTGCAT...TTGTTGGGAGTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCACTGGAGACTACTCATaGAGAACTGCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSTGDYS*RTALGW
Trigger: CCAGCCCAGTGCAGTTCTCAATGAGTAGTCTCCAGT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp GTAGATTCTGCTTCTGGAGAGCCCTCAGGAAGCTTCCTCTCATGGCAAAAAGCACTCAAGAAAGTTAAGTaGCAAAGTCGGAATTTGATC +
Preference number: 5 (lower is better)
Translates to: VDSASGEPSGSFLSWQKALKKVK*QSRNLI
Trigger: GATCAAATTCCGACTTTGCAACTTAACTTTCTTGAG...TGCTTTTTGCCATGAGAGGAAGCTTCCTGAGGGCTCTCCAGAAGCAGAATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATCAAGGGATCACAGGTaGAGATTAAACCTGCACACA +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVSRDHR*RLNLHT
Trigger: TGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS CCA 90 bp ACTCAAGAATCACTGGCTTTGAAATGTGTGCCTCCAGTTTGTTATTaGGCTTCACGGCACAAATCAGAACCAAATTTACACCAAGCGACT +
Preference number: 5 (lower is better)
Translates to: TQESLALKCVPPVCY*ASRHKSEPNLHQAT
Trigger: AGTCGCTTGGTGTAAATTTGGTTCTGATTTGTGCCGTGAAGCCCAATAACAAACTGGAGGCACACATTTCAAAGCCAGTGATTCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467629.1
CDS-3UTR CAA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACTTTCTCAGGTTAATGTaGACCACTTCATGTCTGATG +
Preference number: 5 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDFLRLM*TTSCLM
Trigger: CATCAGACATGAAGTGGTCAACATTAACCTGAGAAA...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCAGAAAGAGAGACGGATaGGTTCCCAAGACAAGCCGT +
Preference number: 5 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSRKRDG*VPKTSR
Trigger: ACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp TCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAGACGACAGCGACATTCATTaGCCAAATGGAAGGTATTTA +
Preference number: 5 (lower is better)
Translates to: SKKRKRDGLVPKTSRDVDDSDIH*PNGRYL
Trigger: TAAATACCTTCCATTTGGCAAATGAATGTCGCTGTC...GTCTACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp GAACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGGTTTCATTTCCTGCTTaGGAATTCTTTCCAGTCACA +
Preference number: 5 (lower is better)
Translates to: ELQRKERETDWFPRQAVTVSFPA*EFFPVT
Trigger: TGTGACTGGAAAGAATTCCAAAGCAGGAAATGAAAC...CGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTAATTTCAACACGAAATTaGGTGGGGTCTCAGATCCAA +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVISTRN*VGSQIQ
Trigger: TTGGATCTGAGACCCCACCAAATTTCGTGTTGAAAT...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp AGATACCCTAAAATCATCACTCTCAAGTTCAAACTTCCACAGGTCCCTAGGCCACACTGGGCTGGATATTaGGTTATTTGTGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: RYPKIITLKFKLPQVPRPHWAGY*VICEDF
Trigger: GAAGTCTTCACAAATAACCAAATATCCAGCCCAGTG...TGGCCTAGGGACCTGTGGAAGTTTGAACTTGAGAGTGATGATTTTAGGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCCGGGGAGGGATAAAATaGCAGCTTTCAAGGGATCAC +
Preference number: 5 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSRGGIK*QLSRDH
Trigger: GTGATCCCTTGAAAGCTGCAATTTTATCCCTCCCCG...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp ACTTCAAAGAAAAGAAAGAGAGACGGATTGGTTCCCAAGACAAGCCGTGACGTATTTCTCAGGTTAATGTaGACCACTTCATGTCTGATG +
Preference number: 5 (lower is better)
Translates to: TSKKRKRDGLVPKTSRDVFLRLM*TTSCLM
Trigger: CATCAGACATGAAGTGGTCAACATTAACCTGAGAAA...TACGTCACGGCTTGTCTTGGGAACCAATCCGTCTCTCTTTCTTTTCTTTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
CDS-3UTR CAA 90 bp CTTTCAAGGGATCACAGGTTGAGATTAAACCTGCACACAGGAAACAACCAGAAAGACAGCGACATTCATTaGCCAAATGGAAGGTATTTA +
Preference number: 5 (lower is better)
Translates to: LSRDHRLRLNLHTGNNQKDSDIH*PNGRYL
Trigger: TAAATACCTTCCATTTGGCAAATGAATGTCGCTGTC...TTTCTGGTTGTTTCCTGTGTGCAGGTTTAATCTCAACCTGTGATCCCTTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS-3UTR CAA 90 bp CTGGCATTTTGGTCACAACCATACAACCAGTCTCTAGAAAATTCTAAACTTTCCATTTCTGCAGCCTGCTaGAATTCCTTCCCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: LAFWSQPYNQSLENSKLSISAAC*NSFPEN
Trigger: GTTTTCAGGGAAGGAATTCAAGCAGGCTGCAGAAAT...GGAAAGTTTAGAATTTTCTAGAGACTGGTTGTATGGTTGTGACCAAAATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000369707.2
CDS TCA 90 bp TTAGTGAAATACAGTCCAAGCCTCCAATGTGCTCATTATACCCTTTaGTCTGGTAATTCCATTCAGAAAATTGTTTTCAGTGACGAATTA +
Preference number: 5 (lower is better)
Translates to: LVKYSPSLQCAHYTL*SGNSIQKIVFSDEL
Trigger: TAATTCGTCACTGAAAACAATTTTCTGAATGGAATTACCAGATCAAAGGGTATAATGAGCACATTGGAGGCTTGGACTGTATTTCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477078.2
CDS GCA 72 bp GGAGCTCACGGTCGCCGCCCTGTGGCTCGCCACCGCTaGCGCAGGCTCCAGAAACAGCTGCGCTCTGGCGCG +
Preference number: 6 (lower is better)
Translates to: GAHGRRPVARHR*RRLQKQLRSGA
Trigger: CGCGCCAGAGCGCAGCTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGTGAGCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 72 bp TTTGCGCAGCTCCCGGAGCTCACGGTCGCCGCCCTGTaGCTCGCCACCGCTGCCGCAGGCTCCAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: FAQLPELTVAAL*LATAAAGSRNS
Trigger: GCTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCACAGGGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 72 bp GCGGCTGAGCCAATGGGCGGCCTCCTTACAGGCTCCTaGAGATCGGGATTCGCGGGTCCTGCCGGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: AAEPMGGLLTGS*RSGFAGPAGAG
Trigger: ACCGGCGCCGGCAGGACCCGCGAATCCCGATCTCCAGGAGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CAA 90 bp TCCCCAGGGTCCTGGTCGCATCCCCAGACATGGTCTCCAGGTGGTTaGCGCAGCTCCCGGAGCTCACGGTCGCCGCCCTGTGGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: SPGSWSHPQTWSPGG*RSSRSSRSPPCGSP
Trigger: TGGCGAGCCACAGGGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGACCCTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 72 bp AGGGTCCTGGTCGCATCCCCAGACATGGTCTCCAGGTaGTTTGCGCAGCTCCCGGAGCTCACGGTCGCCGCC +
Preference number: 6 (lower is better)
Translates to: RVLVASPDMVSR*FAQLPELTVAA
Trigger: GGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CAA 72 bp TCCTGGTCGCATCCCCAGACATGGTCTCCAGGTGGTTaGCGCAGCTCCCGGAGCTCACGGTCGCCGCCCTGT +
Preference number: 6 (lower is better)
Translates to: SWSHPQTWSPGG*RSSRSSRSPPC
Trigger: ACAGGGCGGCGACCGTGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS GCA 72 bp CCTTACAGGCTCCTGGAGATCGGGATTCGCGGGTCCTaGCGGCGCCGGTGGCTGACGAAAGAGGAACCGGTA +
Preference number: 6 (lower is better)
Translates to: PYRLLEIGIRGS*RRRWLTKEEPV
Trigger: TACCGGTTCCTCTTTCGTCAGCCACCGGCGCCGGCAGGACCCGCGAATCCCGATCTCCAGGAGCCTGTAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 72 bp CTGGAGATCGGGATTCGCGGGTCCTGCCGGCGCCGGTaGCTGACGAAAGAGGAACCGGTAGTGGTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: LEIGIRGSCRRR*LTKEEPVVVGC
Trigger: ACAGCCAACCACTACCGGTTCCTCTTTCGTCAGCCACCGGCGCCGGCAGGACCCGCGAATCCCGATCTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS GCA 72 bp TGGCTCGCCACCGCTGCCGCAGGCTCCAGAAACAGCTaGGCTCTGGCGCGCACCCCTTGCCCCAAATTTAAT +
Preference number: 6 (lower is better)
Translates to: WLATAAAGSRNS*ALARTPCPKFN
Trigger: ATTAAATTTGGGGCAAGGGGTGCGCGCCAGAGCGCAGCTGTTTCTGGAGCCTGCGGCAGCGGTGGCGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS CCA 72 bp TTCCTTTCCCCAGGGTCCTGGTCGCATCCCCAGACATaGTCTCCAGGTGGTTTGCGCAGCTCCCGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: FLSPGSWSHPQT*SPGGLRSSRSS
Trigger: TGAGCTCCGGGAGCTGCGCAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGACCCTGGGGAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338595.7
ENST00000450629.6
CDS TCA 72 bp GAGAAGAGCACAGACTGTGGGGTCCCACTTCATGGCTaGTATCCAGAGCCGCAGGGCTGGCGTGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: EKSTDCGVPLHG*YPEPQGWRVAH
Trigger: GTGAGCCACACGCCAGCCCTGCGGCTCTGGATATCAGCCATGAAGTGGGACCCCACAGTCTGTGCTCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS TCA 72 bp CTCAAAGCTTTGGAAGTACCTGCCCAGCAGTGCGGCTaGGCCAATGGGCGGCCTCCTTACAGGCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: LKALEVPAQQCG*ANGRPPYRLLE
Trigger: CTCCAGGAGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS GCA 72 bp GCCCTGGACAGAGGAGGCTCCCCTTCAGGCCAGCACTaGCCATTACTTGAAGACAAGGTGAGCCTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: ALDRGGSPSGQH*PLLEDKVSLSL
Trigger: CAGGCTGAGGCTCACCTTGTCTTCAAGTAATGGGCAGTGCTGGCCTGAAGGGGAGCCTCCTCTGTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CCA 72 bp TTTGGAAGTACCTGCCCAGCAGTGCGGCTGAGCCAATaGGCGGCCTCCTTACAGGCTCCTGGAGATCGGGAT +
Preference number: 6 (lower is better)
Translates to: FGSTCPAVRLSQ*AASLQAPGDRD
Trigger: ATCCCGATCTCCAGGAGCCTGTAAGGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 72 bp CCCGGCGCCCAGAGCATCAGCCAATCCTCAAAGCTTTaGAAGTACCTGCCCAGCAGTGCGGCTGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: PGAQSISQSSKL*KYLPSSAAEPM
Trigger: CATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTGGCTGATGCTCTGGGCGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS GCA 72 bp AGAGCATCAGCCAATCCTCAAAGCTTTGGAAGTACCTaGCCAGCAGTGCGGCTGAGCCAATGGGCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RASANPQSFGST*PAVRLSQWAAS
Trigger: GGAGGCCGCCCATTGGCTCAGCCGCACTGCTGGGCAGGTACTTCCAAAGCTTTGAGGATTGGCTGATGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450629.6
CDS CCA 72 bp TTCATGGCTGATATCCAGAGCCGCAGGGCTGGCGTGTaGCTCACACAGTCCAGTATCCCATACACATCCAGC +
Preference number: 6 (lower is better)
Translates to: FMADIQSRRAGV*LTQSSIPYTSS
Trigger: GCTGGATGTGTATGGGATACTGGACTGTGTGAGCCACACGCCAGCCCTGCGGCTCTGGATATCAGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS CCA 72 bp AGCCGTGACGTAGACTCCCAACAAGCTGGGGAATTCTaGACAGCGAAGGGGTGGACAGTGAGACTCAGCACA +
Preference number: 6 (lower is better)
Translates to: SRDVDSQQAGEF*TAKGWTVRLST
Trigger: TGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGAGTCTACGTCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS CCA 72 bp AAGAAATCCCAAGCCCCCAATCTCGAAACAGTGTGGTaGCTCCCAGTGGGGGCTGCTGTACTTGTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: KKSQAPNLETVW*LPVGAAVLVLV
Trigger: CACCAGCACAAGTACAGCAGCCCCCACTGGGAGCCACCACACTGTTTCGAGATTGGGGGCTTGGGATTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477078.2
CDS CCA 72 bp CTGTGCTGTGTGCTGAGCTTGACCTCTGATTCAGCATaGAACCTGGGGCAACTTACCTCCCCTGCAAGCCTC +
Preference number: 6 (lower is better)
Translates to: LCCVLSLTSDSA*NLGQLTSPASL
Trigger: GAGGCTTGCAGGGGAGGTAAGTTGCCCCAGGTTCCATGCTGAATCAGAGGTCAAGCTCAGCACACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS GCA 72 bp CAATCTCGAAACAGTGTGGTGGCTCCCAGTGGGGGCTaGTGTACTTGTGCTGGTGAGGGGCAAACAACACAA +
Preference number: 6 (lower is better)
Translates to: QSRNSVVAPSGG*CTCAGEGQTTQ
Trigger: TTGTGTTGTTTGCCCCTCACCAGCACAAGTACAGCAGCCCCCACTGGGAGCCACCACACTGTTTCGAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477078.2
CDS CCA 72 bp TCCCAACAAGCTGGGGAATTCTGGACAGCGAAGGGGTaGACAGTGAGACTCAGCACAGCCCAAAGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SQQAGEFWTAKG*TVRLSTAQSQR
Trigger: CCTTTGACTTTGGGCTGTGCTGAGTCTCACTGTCCACCCCTTCGCTGTCCAGAATTCCCCAGCTTGTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000467629.1
ENST00000473401.5
ENST00000498052.1
CDS CAA 72 bp GAACCAGCAGACTTGGTCCTGTGCTGTGTGCTGAGCTaGACCTCTGATTCAGCATGGAACCTGGGGCAACTT +
Preference number: 6 (lower is better)
Translates to: EPADLVLCCVLS*TSDSAWNLGQL
Trigger: AAGTTGCCCCAGGTTCCATGCTGAATCAGAGGTCAAGCTCAGCACACAGCACAGGACCAAGTCTGCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS TCA 72 bp CACATGCCAGGCCAGCTTGTTGACTCTGCTGTGGGGTaGTTCAGAGTTGTAGGTAAGGATGTGAGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: HMPGQLVDSAVG*FRVVGKDVSLG
Trigger: TCCCAAGCTCACATCCTTACCTACAACTCTGAATCACCCCACAGCAGAGTCAACAAGCTGGCCTGGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS GCA 72 bp AGGAACCCCGCTCAGGATCTCCCATTCTCCAAGATCTaGTTTATCAATAAGAAAGGGGATGCTGCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: RNPAQDLPFSKI*FINKKGDAAGP
Trigger: AGGCCCGGCAGCATCCCCTTTCTTATTGATAAAGCAGATCTTGGAGAATGGGAGATCCTGAGCGGGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CCA 72 bp TTAATGTTGACCACTTCATGTCTTTCCCCAGGGTCCTaGTCGCATCCCCAGACATGGTCTCCAGGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: LMLTTSCLSPGS*SHPQTWSPGGL
Trigger: CAAACCACCTGGAGACCATGTCTGGGGATGCGACCAGGACCCTGGGGAAAGACATGAAGTGGTCAACATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473401.5
CDS CAA 72 bp CGGAGGATGAAGAAATCTTCACCATCCTCTACACCATaGCCAAGAAATCCCAAGCCCCCAATCTCGAAACAG +
Preference number: 6 (lower is better)
Translates to: RRMKKSSPSSTP*PRNPKPPISKQ
Trigger: CTGTTTCGAGATTGGGGGCTTGGGATTTCTTGGCAATGGTGTAGAGGATGGTGAAGATTTCTTCATCCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477078.2
CDS CCA 72 bp ATTCTCTCCCACATCTCAACGCTACCAGGCACTCCTTaGTCAAATGTGGGACCTTACAAAATAGCTCCAATA +
Preference number: 6 (lower is better)
Translates to: ILSHISTLPGTP*SNVGPYKIAPI
Trigger: TATTGGAGCTATTTTGTAAGGTCCCACATTTGACCAAGGAGTGCCTGGTAGCGTTGAGATGTGGGAGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000477078.2
CDS CAA 72 bp CTCACAAGCAATAACAGATTCATAGATCAGTTGACATaGGCTGGTCTCCAGGACAGGAATGTGGCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: LTSNNRFIDQLT*AGLQDRNVAKR
Trigger: CCTTTTGGCCACATTCCTGTCCTGGAGACCAGCCAATGTCAACTGATCTATGAATCTGTTATTGCTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338595.7
ENST00000369707.2
ENST00000450629.6
ENST00000473401.5
ENST00000477078.2
CDS TCA 72 bp CCTCCTTTCAACACTAGAGTGACAGTGTGGCTCATCTaGTTGAAGAAACTGGAAGAACAACCTCTACAGAGT +
Preference number: 6 (lower is better)
Translates to: PPFNTRVTVWLI*LKKLEEQPLQS
Trigger: ACTCTGTAGAGGTTGTTCTTCCAGTTTCTTCAATCAGATGAGCCACACTGTCACTCTAGTGTTGAAAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS TCA 72 bp CATAGAGAAGTCCCCCTGATCATTGTCCTGGAAGTCTaGAAAAACATGTTAGGTGGCATTACCTTGTTCAAG +
Preference number: 6 (lower is better)
Translates to: HREVPLIIVLEV*KNMLGGITLFK
Trigger: CTTGAACAAGGTAATGCCACCTAACATGTTTTTTCAGACTTCCAGGACAATGATCAGGGGGACTTCTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CCA 72 bp TCACTGGCTTTGAAATGTGTGCCTCCAGTTTGTTATTaGGCTTCACGGCACAAATCAGAACCAAATTTACAC +
Preference number: 6 (lower is better)
Translates to: SLALKCVPPVCY*ASRHKSEPNLH
Trigger: GTGTAAATTTGGTTCTGATTTGTGCCGTGAAGCCCAATAACAAACTGGAGGCACACATTTCAAAGCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467629.1
CDS CCA 72 bp ACTCAATACTTCCCTATAGCTATAGATCTTGATTGCTaGGCCCAGGTGAGTTGTGGAAATAAGCTATACTCG +
Preference number: 6 (lower is better)
Translates to: TQYFPIAIDLDC*AQVSCGNKLYS
Trigger: CGAGTATAGCTTATTTCCACAACTCACCTGGGCCCAGCAATCAAGATCTATAGCTATAGGGAAGTATTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CAA 72 bp TCAAGAATCACTGGCTTTGAAATGTGTGCCTCCAGTTaGTTATTGGGCTTCACGGCACAAATCAGAACCAAA +
Preference number: 6 (lower is better)
Translates to: SRITGFEMCASS*LLGFTAQIRTK
Trigger: TTTGGTTCTGATTTGTGCCGTGAAGCCCAATAACAAACTGGAGGCACACATTTCAAAGCCAGTGATTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467629.1
CDS GCA 72 bp TCAACTCAATACTTCCCTATAGCTATAGATCTTGATTaGTGGGCCCAGGTGAGTTGTGGAAATAAGCTATAC +
Preference number: 6 (lower is better)
Translates to: STQYFPIAIDLD*WAQVSCGNKLY
Trigger: GTATAGCTTATTTCCACAACTCACCTGGGCCCAGCAATCAAGATCTATAGCTATAGGGAAGTATTGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS CCA 72 bp TTATTGTTGGTACAGGTCTTCCCAAAGAGAAAAGTATaGCACGAATTACCTGCTTCAATCAAGCAAGCTACT +
Preference number: 6 (lower is better)
Translates to: LLLVQVFPKRKV*HELPASIKQAT
Trigger: AGTAGCTTGCTTGATTGAAGCAGGTAATTCGTGCCATACTTTTCTCTTTGGGAAGACCTGTACCAACAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498052.1
CDS TCA 72 bp ATGGATATACAGGTTCCACCAAAGAAGGTGGTGTTCTaGTACTCAAGAATCTTACAAAATAGCTCCAATAAC +
Preference number: 6 (lower is better)
Translates to: MDIQVPPKKVVF*YSRILQNSSNN
Trigger: GTTATTGGAGCTATTTTGTAAGATTCTTGAGTATCAGAACACCACCTTCTTTGGTGGAACCTGTATATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450629.6
ENST00000473401.5
CDS TCA 72 bp TACAGTCCAAGCCTCCAATGTGCTCATTATACCCTTTaGTCTGGTAATTCCATTCAGAAAATTGTTTTCAGT +
Preference number: 6 (lower is better)
Translates to: YSPSLQCAHYTL*SGNSIQKIVFS
Trigger: ACTGAAAACAATTTTCTGAATGGAATTACCAGATCAAAGGGTATAATGAGCACATTGGAGGCTTGGACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477078.2