RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000134202

Ensembl transcript IDs: ENST00000256594.7, ENST00000361066.7, ENST00000476321.5, ENST00000488824.1, ENST00000540225.2

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCATTTGGGCCCTCTGACCATCACTAGAGAGATCCTTGGCTTCTaGTCCATAGGGGATGGCAATCTGGCCCACAGGCCTATCTCTGAA +
Preference number: 1 (lower is better)
Translates to: CHLGPLTITREILGF*SIGDGNLAHRPISE
Trigger: TTCAGAGATAGGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAGAAGCCAAGGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp CTTCTGGTCCATAGGGGATGGCAATCTGGCCCACAGGCCTATCTCTaGAGACTATTCAGACTCTGCTCTGTGAAAGGAGAGTGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: LLVHRGWQSGPQAYL*RLFRLCSVKGEWCQ
Trigger: TTGGCACCACTCTCCTTTCACAGAGCAGAGTCTGAATAGTCTTCAGAGATAGGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 90 bp GCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTaGCATTTGGGCCCTCTGACCATCACTAGAGAGATCCTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: APSVCTIPPDITGYP*HLGPLTITREILGF
Trigger: GAAGCCAAGGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 90 bp CCACTCTCAGGGCTTGGGCATGAACCTACAGCCCTTGAACTCAGTTaGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATC +
Preference number: 1 (lower is better)
Translates to: PLSGLGHEPTALELS*GVGKCQYRSDSIHI
Trigger: GATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGCTGTAGGTTCATGCCCAAGCCCTGAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp CAGTTGAATTGTCTGCTTAGCACCTTCTGTCTGTACTATTCCTCCTaGCATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCAC +
Preference number: 1 (lower is better)
Translates to: QLNCLLSTFCLYYSS*HHWVSLPFGPSDHH
Trigger: GTGATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAAGCAGACAATTCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp CTGATCCTCTCACCTCAGCCTCTGAAGGTGTTGTTATTACAGCTGTaGGCAACCACACCTGGCCTGTTTTGGGGATCTTTGCATGTTAGT +
Preference number: 1 (lower is better)
Translates to: LILSPQPLKVLLLQL*ATTPGLFWGSLHVS
Trigger: ACTAACATGCAAAGATCCCCAAAACAGGCCAGGTGTGGTTGCTCACAGCTGTAATAACAACACCTTCAGAGGCTGAGGTGAGAGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 90 bp CATATCATCGATCTAGCCCCAGGGGCATCCTCAATTTCTCTGTCCTaGCTTAAATACACAAGGGTAGAGCATACCGCTCCCTCACACTAT +
Preference number: 1 (lower is better)
Translates to: HIIDLAPGASSISLS*LKYTRVEHTAPSHY
Trigger: ATAGTGTGAGGGAGCGGTATGCTCTACCCTTGTGTATTTAAGGCAGGACAGAGAAATTGAGGATGCCCCTGGGGCTAGATCGATGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp ATGGAGTCTGGGCCTTTATCCCACTTGCCTGCAGTAAGACTGTTATaGGTTTGGTGTTTCCCTCCAGACTCTTCTCTATGCTTGGAGATC +
Preference number: 1 (lower is better)
Translates to: MESGPLSHLPAVRLL*VWCFPPDSSLCLEI
Trigger: GATCTCCAAGCATAGAGAAGAGTCTGGAGGGAAACACCAAACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAAGGCCCAGACTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 90 bp GGGCATGAACCTACAGCCCTTGAACTCAGTTGGGGAGTAGGGAAATaGCAGTATCGCAGCGATTCAATTCATATCTTGATGATTCTCCAC +
Preference number: 1 (lower is better)
Translates to: GHEPTALELSWGVGK*QYRSDSIHILMILH
Trigger: GTGGAGAATCATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGCTGTAGGTTCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp CTTGCCGTTGTTCTTGTGAACATAGTTCCTTTCTATCCCTTCTCCTaGGACCTTCCCTCTCTATGTGCCTATCCATCCCTTAACTACCTC +
Preference number: 1 (lower is better)
Translates to: LAVVLVNIVPFYPFS*DLPSLCAYPSLNYL
Trigger: GAGGTAGTTAAGGGATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACTATGTTCACAAGAACAACGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 90 bp CTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATGGAGTCTaGGCCTTTATCCCACTTGCCTGCAGTAAGACTGTTATGAGTTTG +
Preference number: 1 (lower is better)
Translates to: LSLNLEMPFNFHHGV*AFIPLACSKTVMSL
Trigger: CAAACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAAGGCCCAGACTCCATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 90 bp CACACTATGGAAATTATATCAATAGTTATCAGACTGAAAAACTTCTaGGCTTTATACCTCTTCTGGCCAAAGGCTCCCCCATGCCCAAGA +
Preference number: 1 (lower is better)
Translates to: HTMEIISIVIRLKNF*ALYLFWPKAPPCPR
Trigger: TCTTGGGCATGGGGGAGCCTTTGGCCAGAAGAGGTATAAAGCTCAGAAGTTTTTCAGTCTGATAACTATTGATATAATTTCCATAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCCTGGTCCATAGGGGATaGCAATCTGGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: TIPPDITGYPCHLGPLTILVHRG*QSGPQA
Trigger: GGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAG...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGCAAAGCAAGAGCGCTaGCCCCTTACGGACAGGATG +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMAKQER*PLTDRM
Trigger: CATCCTGTCCGTAAGGGGTCAGCGCTCTTGCTTTGC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTCAGACTCTGCTCTGTaGAAGGAGAGTGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMSDSAL*KESGAK
Trigger: CTTGGCACCACTCTCCTTTCACAGAGCAGAGTCTGA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGTAGCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIVARLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGCTAC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCTGGTCCATAGGGGATaGCAATCTGGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSILVHRG*QSGPQA
Trigger: GGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CAA 90 bp TCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTaGGGCCCTCTGACCATCACTAGAGAGATCCTTGGCTTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: SVCTIPPDITGYPCH*GPLTITREILGFWS
Trigger: GGACCAGAAGCCAAGGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGCAAAGCAAGAGCGCTaGCCCCTTACGGACAGGATG +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIAKQER*PLTDRM
Trigger: CATCCTGTCCGTAAGGGGTCAGCGCTCTTGCTTTGC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGATCTCTTGACCTCGTaGTCTGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTDLLTS*SAHLSL
Trigger: GAGGCTGAGGTGGGCAGATCACGAGGTCAAGAGATC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCTGGGGAGTAGGGAAATaGCAGTATCGCAGCGATTCA +
Preference number: 2 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIWGVGK*QYRSDS
Trigger: TGAATCGCTGCGATACTGGCATTTCCCTACTCCCCA...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGGGGTTTCATCATGTTaGCCAGGATGGTCTCGATCT +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMGVSSC*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAACATGATGAAACCCC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCTCAGTCACCCAGATTaGAGTGCAGTGGCAAGAACA +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMLSHPD*SAVART
Trigger: TGTTCTTGCCACTGCACTCCAATCTGGGTGACTGAG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTATCACTGGGTATCCCTaGCATTTGGGCCCTCTGACC +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTITGYP*HLGPLT
Trigger: GGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGAT...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCCACCAAGCCCGGCCATaGATGAGTTTTTATAGCATG +
Preference number: 2 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIHQARP*MSFYSM
Trigger: CATGCTATAAAAACTCATCCATGGCCGGGCTTGGTG...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTCAGACTCTGCTCTGTaGAAGGAGAGTGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHSDSAL*KESGAK
Trigger: CTTGGCACCACTCTCCTTTCACAGAGCAGAGTCTGA...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCCCAAGATACTGGCCTaGACACCTAATCCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLPKILA*TPNPCS
Trigger: TGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGGG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGCCCTTGAACTCAGTTaGGGAGTAGGGAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIALELS*GVGKCQ
Trigger: CTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCACACCTGGCCTGTTTTaGGGATCTTTGCATGTTAGT +
Preference number: 2 (lower is better)
Translates to: TIPPDITGYPCHLGPLTITPGLF*GSLHVS
Trigger: ACTAACATGCAAAGATCCCCAAAACAGGCCAGGTGT...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCCTGCTCACAGGGGGTaGCAAAACATGGCAGTTGAA +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIPAHRG*QNMAVE
Trigger: TTCAACTGCCATGTTTTGCCACCCCCTGTGAGCAGG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATGGGGTTTCATCATGTTaGCCAGGATGGTCTCGATCT +
Preference number: 2 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHGVSSC*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAACATGATGAAACCCC...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTCTTCCGTTGCCACATaGTACTCCATAGTATTGACA +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMSSVAT*YSIVLT
Trigger: TGTCAATACTATGGAGTACCATGTGGCAACGGAAGA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGTGAGCAACCACACCTaGCCTGTTTTGGGGATCTTT +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLVSNHT*PVLGIF
Trigger: AAAGATCCCCAAAACAGGCCAGGTGTGGTTGCTCAC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCAGATTGGAGTGCAGTaGCAAGAACACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIQIGVQ*QEHSSL
Trigger: CAGTGAGCTGTGTTCTTGCCACTGCACTCCAATCTG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGAGATCCTTGGCTTCTaGTCCATAGGGGATGGCAAT +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLEILGF*SIGDGN
Trigger: ATTGCCATCCCCTATGGACCAGAAGCCAAGGATCTC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCCATGCCCAAGATACTaGCCTGAACACCTAATCCCT +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLPCPRY*PEHLIP
Trigger: AGGGATTAGGTGTTCAGGCCAGTATCTTGGGCATGG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CAA 90 bp ACGGTTTCCGAACTCCGGTTAAGTCCATCAGTACCACAGTTTTACTaGTGTTATCCTCACCCAGTCTTCACAGGGACTCCAGTCCCATTT +
Preference number: 2 (lower is better)
Translates to: TVSELRLSPSVPQFY*CYPHPVFTGTPVPF
Trigger: AAATGGGACTGGAGTCCCTGTGAAGACTGGGTGAGGATAACACAAGTAAAACTGTGGTACTGATGGACTTAACCGGAGTTCGGAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTCCCTTACGGACAGGATaGAACAAAACAAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTPLRTG*NKTSSA
Trigger: TGCAGAGCTTGTTTTGTTTCATCCTGTCCGTAAGGG...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGCTAGCCCACCAGTCTaGAATACTGCCTTTATCACA +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLASPPV*NTAFIT
Trigger: TGTGATAAAGGCAGTATTTCAGACTGGTGGGCTAGC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTTTCTATCCCTTCTCCTaGGACCTTCCCTCTCTATGT +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTFYPFS*DLPSLC
Trigger: ACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAA...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATGTAGCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHVARLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGCTAC...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTTGTCCCAACTCTATTaGCTAGCCCACCAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLLSQLY*LAHQSE
Trigger: TTCAGACTGGTGGGCTAGCCAATAGAGTTGGGACAA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGTCCCAACTCTATTaGCTAGCCCACCAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHLSQLY*LAHQSE
Trigger: TTCAGACTGGTGGGCTAGCCAATAGAGTTGGGACAA...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCACTTCTCCTACCCCGTaGTCACAAAAATTCTTACAT +
Preference number: 2 (lower is better)
Translates to: TIPPDITGYPCHLGPLTITSPTP*SQKFLH
Trigger: ATGTAAGAATTTTTGTGACCACGGGGTAGGAGAAGT...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCACCAAGCCCGGCCATaGATGAGTTTTTATAGCATG +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLHQARP*MSFYSM
Trigger: CATGCTATAAAAACTCATCCATGGCCGGGCTTGGTG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCTGGTCTTAAACTCCTaGCCTCAACTGATCCTCTCA +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSILVLNS*PQLILS
Trigger: TGAGAGGATCAGTTGAGGCCAGGAGTTTAAGACCAG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTGTCATTACAGACAATaGCACAGTGAACATCTTAGT +
Preference number: 2 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMCHYRQ*HSEHLS
Trigger: ACTAAGATGTTCACTGTGGCATTGTCTGTAATGACA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGCCATTTGGGCCCTCTaGCCATCACTAGAGAGATCC +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYAIWAL*PSLERS
Trigger: GGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGCCTTAACTTGGAAATaGCCTTTAACTTCCACCATG +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLALTWK*PLTSTM
Trigger: CATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTTCTTCCGTTGCCACATaGTACTCCATAGTATTGACA +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTSSVAT*YSIVLT
Trigger: TGTCAATACTATGGAGTACCATGTGGCAACGGAAGA...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGATCTCTTGACCTCGTaGTCTGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLDLLTS*SAHLSL
Trigger: GAGGCTGAGGTGGGCAGATCACGAGGTCAAGAGATC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCCCAAGATACTGGCCTaGACACCTAATCCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYPKILA*TPNPCS
Trigger: TGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGGG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGAGACTGAAAAACTTCTaGGCTTTATACCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLRLKNF*ALYLFW
Trigger: CCAGAAGAGGTATAAAGCTCAGAAGTTTTTCAGTCT...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTTATCCCACTTGCCTaGAGTAAGACTGTTATGAGT +
Preference number: 2 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHFIPLA*SKTVMS
Trigger: ACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAA...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGCCCTTGAACTCAGTTaGGGAGTAGGGAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYALELS*GVGKCQ
Trigger: CTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATTTGTTATTACAGCTGTaGGCAACCACACCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHLLLQL*ATTPGL
Trigger: CAGGCCAGGTGTGGTTGCTCACAGCTGTAATAACAA...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCCACAGGCCTATCTCTaGAGACTATTCAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYPQAYL*RLFRLC
Trigger: GCAGAGTCTGAATAGTCTTCAGAGATAGGCCTGTGG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTTGTCATTACAGACAATaGCACAGTGAACATCTTAGT +
Preference number: 2 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTCHYRQ*HSEHLS
Trigger: ACTAAGATGTTCACTGTGGCATTGTCTGTAATGACA...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATTCACCCAGATTGGAGTaGAGTGGCAAGAACACAGCT +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHSPRLE*SGKNTA
Trigger: AGCTGTGTTCTTGCCACTGCACTCCAATCTGGGTGA...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCTCAATTTCTCTGTCCTaGCTTAAATACACAAGGGTA +
Preference number: 2 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSISISLS*LKYTRV
Trigger: TACCCTTGTGTATTTAAGGCAGGACAGAGAAATTGA...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGTGAGCAACCACACCTaGCCTGTTTTGGGGATCTTT +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYVSNHT*PVLGIF
Trigger: AAAGATCCCCAAAACAGGCCAGGTGTGGTTGCTCAC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCAGATTGGAGTGCAGTaGCAAGAACACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYQIGVQ*QEHSSL
Trigger: CAGTGAGCTGTGTTCTTGCCACTGCACTCCAATCTG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCCATGCCCAAGATACTaGCCTGAACACCTAATCCCT +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYPCPRY*PEHLIP
Trigger: AGGGATTAGGTGTTCAGGCCAGTATCTTGGGCATGG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CAA 90 bp CATGAGCACATTCTCTTAGTTAGAAAAGCAAGTCTTAGCCTTAACTaGGAAATGCCCTTTAACTTCCACCATGGAGTCTGGGCCTTTATC +
Preference number: 2 (lower is better)
Translates to: HEHILLVRKASLSLN*EMPFNFHHGVWAFI
Trigger: GATAAAGGCCCAGACTCCATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAACTAAGAGAATGTGCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATCTGGTCTTAAACTCCTaGCCTCAACTGATCCTCTCA +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHLVLNS*PQLILS
Trigger: TGAGAGGATCAGTTGAGGCCAGGAGTTTAAGACCAG...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGCAGTAAGACTGTTATaGGTTTGGTGTTTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYAVRLL*VWCFPP
Trigger: TGGAGGGAAACACCAAACTCATAACAGTCTTACTGC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATACACCTGGCCTGTTTTaGGGATCTTTGCATGTTAGT +
Preference number: 2 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYTPGLF*GSLHVS
Trigger: ACTAACATGCAAAGATCCCCAAAACAGGCCAGGTGT...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTACCCTTACGGACAGGATaGAACAAAACAAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLPLRTG*NKTSSA
Trigger: TGCAGAGCTTGTTTTGTTTCATCCTGTCCGTAAGGG...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATTTTATCCCACTTGCCTaGAGTAAGACTGTTATGAGT +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHFIPLA*SKTVMS
Trigger: ACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAA...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATACCAGTCTGAAATACTaGCTTTATCACACTAAACTC +
Preference number: 2 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHTSLKY*LYHTKL
Trigger: GAGTTTAGTGTGATAAAGGCAGTATTTCAGACTGGT...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR GCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAACCAGTCTGAAATACTaGCTTTATCACACTAAACTC +
Preference number: 2 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLTSLKY*LYHTKL
Trigger: GAGTTTAGTGTGATAAAGGCAGTATTTCAGACTGGT...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 72 bp CTCTTCTGGCCAAAGGCTCCCCCATGCCCAAGATACTaGCCTGAACACCTAATCCCTGCTCACAGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: LFWPKAPPCPRY*PEHLIPAHRGW
Trigger: CCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGGGCATGGGGGAGCCTTTGGCCAGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp CTGGCCAAAGGCTCCCCCATGCCCAAGATACTGGCCTaGACACCTAATCCCTGCTCACAGGGGGTGGCAAAA +
Preference number: 3 (lower is better)
Translates to: LAKGSPMPKILA*TPNPCSQGVAK
Trigger: TTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGGGCATGGGGGAGCCTTTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 72 bp GGCCCTCTGACCATCACTAGAGAGATCCTTGGCTTCTaGTCCATAGGGGATGGCAATCTGGCCCACAGGCCT +
Preference number: 3 (lower is better)
Translates to: GPLTITREILGF*SIGDGNLAHRP
Trigger: AGGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAGAAGCCAAGGATCTCTCTAGTGATGGTCAGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp CTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTaGCCATCACTAGAGAGATCCTTGGCTTCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: LTSLGIPAIWAL*PSLERSLASGP
Trigger: TGGACCAGAAGCCAAGGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 72 bp GGGCTTGGGCATGAACCTACAGCCCTTGAACTCAGTTaGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCA +
Preference number: 3 (lower is better)
Translates to: GLGHEPTALELS*GVGKCQYRSDS
Trigger: TGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGCTGTAGGTTCATGCCCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp GATCTAGCCCCAGGGGCATCCTCAATTTCTCTGTCCTaGCTTAAATACACAAGGGTAGAGCATACCGCTCCC +
Preference number: 3 (lower is better)
Translates to: DLAPGASSISLS*LKYTRVEHTAP
Trigger: GGGAGCGGTATGCTCTACCCTTGTGTATTTAAGGCAGGACAGAGAAATTGAGGATGCCCCTGGGGCTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGGGTATCCCTGCCATTaGGGCCCTCTGACCATCACT +
Preference number: 3 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTGYPCH*GPLTIT
Trigger: AGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGCTCAGTCACCCAGATaGGAGTGCAGTGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTAQSPR*ECSGKN
Trigger: GTTCTTGCCACTGCACTCCAATCTGGGTGACTGAGC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp CATAGGGGATGGCAATCTGGCCCACAGGCCTATCTCTaGAGACTATTCAGACTCTGCTCTGTGAAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: HRGWQSGPQAYL*RLFRLCSVKGE
Trigger: CTCTCCTTTCACAGAGCAGAGTCTGAATAGTCTTCAGAGATAGGCCTGTGGGCCAGATTGCCATCCCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp GTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTaGCATTTGGGCCCTCTGACCATCACTAGAGAGATC +
Preference number: 3 (lower is better)
Translates to: VCTIPPDITGYP*HLGPLTITREI
Trigger: GATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCAAGACTGTTATGAGTTaGGTGTTTCCCTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIKTVMS*VFPSRL
Trigger: GAGTCTGGAGGGAAACACCAAACTCATAACAGTCTT...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp GGGAAAAAGGAAAGCTCTCAGCAAAGACAGGGGTCTTaGAAGCAGGTTGCCAGTAAGGCGTCTGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: GKKESSQQRQGS*KQVASKASVFC
Trigger: ACAGAACACAGACGCCTTACTGGCAACCTGCTTTCAAGACCCCTGTCTTTGCTGAGAGCTTTCCTTTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp TTCCACCATGGAGTCTGGGCCTTTATCCCACTTGCCTaGAGTAAGACTGTTATGAGTTTGGTGTTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: FHHGVWAFIPLA*SKTVMSLVFPS
Trigger: GGAGGGAAACACCAAACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAAGGCCCAGACTCCATGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 72 bp TTGCCAGTAAGGCGTCTGTGTTCTGTGTCTTTTATGTaGCAGAAGCTGGGAAGTCTTCTGTGGGTTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LPVRRLCSVSFM*QKLGSLLWVLP
Trigger: GGGCAAAACCCACAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTACTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp GGGCCTTTATCCCACTTGCCTGCAGTAAGACTGTTATaGGTTTGGTGTTTCCCTCCAGACTCTTCTCTATGC +
Preference number: 3 (lower is better)
Translates to: GPLSHLPAVRLL*VWCFPPDSSLC
Trigger: GCATAGAGAAGAGTCTGGAGGGAAACACCAAACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATACCCACTCTCAGGGCTaGGGCATGAACCTACAGCCC +
Preference number: 3 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHTHSQG*GMNLQP
Trigger: GGGCTGTAGGTTCATGCCCAAGCCCTGAGAGTGGGT...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATACCCACTCTCAGGGCTaGGGCATGAACCTACAGCCC +
Preference number: 3 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYTHSQG*GMNLQP
Trigger: GGGCTGTAGGTTCATGCCCAAGCCCTGAGAGTGGGT...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCTGCTTTTTGTCTCACTaGTCATTTATTTGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: TIPPDITGYPCHLGPLTICFLSH*SFICGC
Trigger: GCACCCACAAATAAATGACAAGTGAGACAAAAAGCA...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCACGGTTTCCACTTATTaGTCATTACAGACAATGCCA +
Preference number: 3 (lower is better)
Translates to: TIPPDITGYPCHLGPLTITVSTY*SLQTMP
Trigger: TGGCATTGTCTGTAATGACAAATAAGTGGAAACCGT...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGGCAAAACATGGCAGTaGAATTGTCTGCTTAGCACC +
Preference number: 3 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTGKTWQ*NCLLST
Trigger: GGTGCTAAGCAGACAATTCAACTGCCATGTTTTGCC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTTAATGAGTAAGCAATaGTCCCAACTCTATTGGCTA +
Preference number: 3 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMLMSKQ*SQLYWL
Trigger: TAGCCAATAGAGTTGGGACAATTGCTTACTCATTAA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGCTTTGTGTTTAATGTaGGGCCTTAAATTCCAGATT +
Preference number: 3 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIALCLM*GLKFQI
Trigger: AATCTGGAATTTAAGGCCCAACATTAAACACAAAGC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCAAGACTGTTATGAGTTaGGTGTTTCCCTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIKTVMS*VFPSRL
Trigger: GAGTCTGGAGGGAAACACCAAACTCATAACAGTCTT...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp ACTCAGCTGGACACCAGTAACATAAGTGCTATTCATTaGAAAGAGCAAAGCAAGAGCGCTGACCCCTTACGG +
Preference number: 3 (lower is better)
Translates to: TQLDTSNISAIH*KEQSKSADPLR
Trigger: CCGTAAGGGGTCAGCGCTCTTGCTTTGCTCTTTTCAATGAATAGCACTTATGTTACTGGTGTCCAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp AATCCCTGCTCACAGGGGGTGGCAAAACATGGCAGTTaGATTGTCTGCTTAGCACCTTCTGTCTGTACTATT +
Preference number: 3 (lower is better)
Translates to: NPCSQGVAKHGS*IVCLAPSVCTI
Trigger: AATAGTACAGACAGAAGGTGCTAAGCAGACAATTCAACTGCCATGTTTTGCCACCCCCTGTGAGCAGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp CCTACAGCCCTTGAACTCAGTTGGGGAGTAGGGAAATaGCAGTATCGCAGCGATTCAATTCATATCTTGATG +
Preference number: 3 (lower is better)
Translates to: PTALELSWGVGK*QYRSDSIHILM
Trigger: CATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp CTTCTTGGGGTACTACAGCTGTGCATGCCTAAGTTTTaGCAAAGGGACTCCATCTTGGTTATTACCCATGAG +
Preference number: 3 (lower is better)
Translates to: LLGVLQLCMPKF*QRDSILVITHE
Trigger: CTCATGGGTAATAACCAAGATGGAGTCCCTTTGGCAAAACTTAGGCATGCACAGCTGTAGTACCCCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGCTCAGTCACCCAGATaGGAGTGCAGTGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYAQSPR*ECSGKN
Trigger: GTTCTTGCCACTGCACTCCAATCTGGGTGACTGAGC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR TCA 72 bp GTTCTTGTGAACATAGTTCCTTTCTATCCCTTCTCCTaGGACCTTCCCTCTCTATGTGCCTATCCATCCCTT +
Preference number: 3 (lower is better)
Translates to: VLVNIVPFYPFS*DLPSLCAYPSL
Trigger: AAGGGATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACTATGTTCACAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCACGGTTTCCACTTATTaGTCATTACAGACAATGCCA +
Preference number: 3 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSITVSTY*SLQTMP
Trigger: TGGCATTGTCTGTAATGACAAATAAGTGGAAACCGT...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCTTAATGAGTAAGCAATaGTCCCAACTCTATTGGCTA +
Preference number: 3 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSILMSKQ*SQLYWL
Trigger: TAGCCAATAGAGTTGGGACAATTGCTTACTCATTAA...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATGTACCACAGTTTTACTaGTGTTATCCTCACCCAGTC +
Preference number: 3 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHVPQFY*CYPHPV
Trigger: GACTGGGTGAGGATAACACAAGTAAAACTGTGGTAC...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CCA 72 bp TTATTTTTAATGAGTAAGCAATTGTCCCAACTCTATTaGCTAGCCCACCAGTCTGAAATACTGCCTTTATCA +
Preference number: 3 (lower is better)
Translates to: LFLMSKQLSQLY*LAHQSEILPLS
Trigger: TGATAAAGGCAGTATTTCAGACTGGTGGGCTAGCCAATAGAGTTGGGACAATTGCTTACTCATTAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTATGCTTTTTGTCTCACTaGTCATTTATTTGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLCFLSH*SFICGC
Trigger: GCACCCACAAATAAATGACAAGTGAGACAAAAAGCA...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR-3UTR CAA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGCTTTGTGTTTAATGTaGGGCCTTAAATTCCAGATT +
Preference number: 3 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLALCLM*GLKFQI
Trigger: AATCTGGAATTTAAGGCCCAACATTAAACACAAAGC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR GCA 72 bp TTTACACGGTTTCCACTTATTTGTCATTACAGACAATaGCACAGTGAACATCTTAGTATATGTCTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: FTRFPLICHYRQ*HSEHLSICLFE
Trigger: TTCAAAGAGACATATACTAAGATGTTCACTGTGGCATTGTCTGTAATGACAAATAAGTGGAAACCGTGTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTTGGGGTTCAGGGCCTaGCGACCCCGAGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMLGFRA*RPRGGT
Trigger: GGTCCCGCCTCGGGGTCGCCAGGCCCTGAACCCCAA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCCGTTCTCCGTCCCTTaGCTCCGCGGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMPFSVP*LRGSTG
Trigger: CCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAACGG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTTGGGGTTCAGGGCCTaGCGACCCCGAGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLLGFRA*RPRGGT
Trigger: GGTCCCGCCTCGGGGTCGCCAGGCCCTGAACCCCAA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGGCTCCACAGGGCCGTaGGCAGGCGCGACTAATGCC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLGSTGP*AGATNA
Trigger: GGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGTAGCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIVARLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGCTAC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCTGGTCCATAGGGGATaGCAATCTGGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMLVHRG*QSGPQA
Trigger: GGCCTGTGGGCCAGATTGCCATCCCCTATGGACCAG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGCAAAGCAAGAGCGCTaGCCCCTTACGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIAKQER*PLTDRM
Trigger: CATCCTGTCCGTAAGGGGTCAGCGCTCTTGCTTTGC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCCCCACCTCAGCCTCCTaGGTAGCTGGGACTATGCAT +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIPTSAS*VAGTMH
Trigger: ATGCATAGTCCCAGCTACCCAGGAGGCTGAGGTGGG...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGACTCGCACGACATGGTaGCGGGCTTCCGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLTRTTW*RASEPS
Trigger: CGAAGGCTCGGAAGCCCGTCACCATGTCGTGCGAGT...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCATAAGAGGTATCCGTaGACTCCAGGAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMHKRYP*TPGAGG
Trigger: TCCGCCTGCTCCTGGAGTTCACGGATACCTCTTATG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCCAAAGGCTCCCCCATaGCCAAGATACTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMPKAPP*PRYWPE
Trigger: TTCAGGCCAGTATCTTGGGCATGGGGGAGCCTTTGG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCCCAAGATACTGGCCTaGACACCTAATCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMPKILA*TPNPCS
Trigger: TGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGGG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATGTAGCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHVARLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGCTAC...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCCTGCTCACAGGGGGTaGCAAAACATGGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMPAHRG*QNMAVE
Trigger: TTCAACTGCCATGTTTTGCCACCCCCTGTGAGCAGG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGATCTCTTGACCTCGTaGTCTGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLDLLTS*SAHLSL
Trigger: GAGGCTGAGGTGGGCAGATCACGAGGTCAAGAGATC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCCCACCTCAGCCTCCTaGGTAGCTGGGACTATGCAT +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIPTSAS*VAGTMH
Trigger: ATGCATAGTCCCAGCTACCCAGGAGGCTGAGGTGGG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGCAGATTGGAGTGCAGTaGCAAGAACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMQIGVQ*QEHSSL
Trigger: CAGTGAGCTGTGTTCTTGCCACTGCACTCCAATCTG...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGAGATCCTTGGCTTCTaGTCCATAGGGGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMEILGF*SIGDGN
Trigger: ATTGCCATCCCCTATGGACCAGAAGCCAAGGATCTC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCATAAGAGGTATCCGTaGACTCCAGGAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLHKRYP*TPGAGG
Trigger: TCCGCCTGCTCCTGGAGTTCACGGATACCTCTTATG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATGCCATTTGGGCCCTCTaGCCATCACTAGAGAGATCC +
Preference number: 4 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHAIWAL*PSLERS
Trigger: GGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGC...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGCCATTTGGGCCCTCTaGCCATCACTAGAGAGATCC +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIAIWAL*PSLERS
Trigger: GGATCTCTCTAGTGATGGTCAGAGGGCCCAAATGGC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTTCTATCCCTTCTCCTaGGACCTTCCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMFYPFS*DLPSLC
Trigger: ACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCTGTCTGCCTATTCCTTaGAGCCTTCTCAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTICLPIP*SLLRTN
Trigger: GTTGGTTCTGAGAAGGCTTCAAGGAATAGGCAGACA...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361066.7
CDS-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATGGCTCCACAGGGCCGTaGGCAGGCGCGACTAATGCC +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHGSTGP*AGATNA
Trigger: GGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCC...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATCCGTTCTCCGTCCCTTaGCTCCGCGGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHPFSVP*LRGSTG
Trigger: CCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAACGG...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCATCACTGGGTATCCCTaGCATTTGGGCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIITGYP*HLGPLT
Trigger: GGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGAT...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTTGTCCCAACTCTATTaGCTAGCCCACCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMLSQLY*LAHQSE
Trigger: TTCAGACTGGTGGGCTAGCCAATAGAGTTGGGACAA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCTCTGTGAAAGGAGAGTaGTGCCAAGTCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTISVKGE*CQVIST
Trigger: TGTGGAGATGACTTGGCACCACTCTCCTTTCACAGA...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGCACCAAAGTTGGGATaGTCACTTCTGAGCAACATC +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMAPKLG*SLLSNI
Trigger: GATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGCACCAAAGTTGGGATaGTCACTTCTGAGCAACATC +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIAPKLG*SLLSNI
Trigger: GATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTCAGACTCTGCTCTGTaGAAGGAGAGTGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLSDSAL*KESGAK
Trigger: CTTGGCACCACTCTCCTTTCACAGAGCAGAGTCTGA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCTCAGACTCTGCTCTGTaGAAGGAGAGTGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSISDSAL*KESGAK
Trigger: CTTGGCACCACTCTCCTTTCACAGAGCAGAGTCTGA...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTTGTTATTACAGCTGTaGGCAACCACACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLLLLQL*ATTPGL
Trigger: CAGGCCAGGTGTGGTTGCTCACAGCTGTAATAACAA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCCACAGGCCTATCTCTaGAGACTATTCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLPQAYL*RLFRLC
Trigger: GCAGAGTCTGAATAGTCTTCAGAGATAGGCCTGTGG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATAGCAGGCGGATGGCGTaGGCCAGCCCACGAATATCC +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYSRRMA*ASPRIS
Trigger: GGATATTCGTGGGCTGGCGCACGCCATCCGCCTGCT...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATCACACATGTTGTGCTTaGGAGCGATGTAGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHHTCCA*ERCSAR
Trigger: TCTTGCGCTACATCGCTCGCAAGCACAACATGTGTG...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTTGGGGAGTAGGGAAATaGCAGTATCGCAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTWGVGK*QYRSDS
Trigger: TGAATCGCTGCGATACTGGCATTTCCCTACTCCCCA...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTCACCCAGATTGGAGTaGAGTGGCAAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLSPRLE*SGKNTA
Trigger: AGCTGTGTTCTTGCCACTGCACTCCAATCTGGGTGA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGCCTTAACTTGGAAATaGCCTTTAACTTCCACCATG +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIALTWK*PLTSTM
Trigger: CATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGTGAAAGGAGAGTGGTaGCAAGTCATCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTVKGEW*QVISTG
Trigger: TCCTGTGGAGATGACTTGGCACCACTCTCCTTTCAC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGGGGTTTCATCATGTTaGCCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTGVSSC*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAACATGATGAAACCCC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGTGAGCAACCACACCTaGCCTGTTTTGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIVSNHT*PVLGIF
Trigger: AAAGATCCCCAAAACAGGCCAGGTGTGGTTGCTCAC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTCAGATTGGAGTGCAGTaGCAAGAACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTQIGVQ*QEHSSL
Trigger: CAGTGAGCTGTGTTCTTGCCACTGCACTCCAATCTG...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCTCAGTCACCCAGATTaGAGTGCAGTGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLLSHPD*SAVART
Trigger: TGTTCTTGCCACTGCACTCCAATCTGGGTGACTGAG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGCTAGCCCACCAGTCTaGAATACTGCCTTTATCACA +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIASPPV*NTAFIT
Trigger: TGTGATAAAGGCAGTATTTCAGACTGGTGGGCTAGC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATCAAGCTCTGCAAGTCTaGCTCCTGCTCAGCATACAG +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDQALQV*LLLSIQ
Trigger: CTGTATGCTGAGCAGGAGGCAGACTTGCAGAGCTTG...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGTTTATCCCACTTGCCTaGAGTAAGACTGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMFIPLA*SKTVMS
Trigger: ACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAA...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCTTGTCCCAACTCTATTaGCTAGCCCACCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSILSQLY*LAHQSE
Trigger: TTCAGACTGGTGGGCTAGCCAATAGAGTTGGGACAA...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCTGGTCTTAAACTCCTaGCCTCAACTGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLLVLNS*PQLILS
Trigger: TGAGAGGATCAGTTGAGGCCAGGAGTTTAAGACCAG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGGGGGTGGCAAAACATaGCAGTTGAATTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTGGGKT*QLNCLL
Trigger: AAGCAGACAATTCAACTGCCATGTTTTGCCACCCCC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATGCAAAGCAAGAGCGCTaGCCCCTTACGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHAKQER*PLTDRM
Trigger: CATCCTGTCCGTAAGGGGTCAGCGCTCTTGCTTTGC...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGCAGTAAGACTGTTATaGGTTTGGTGTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLAVRLL*VWCFPP
Trigger: TGGAGGGAAACACCAAACTCATAACAGTCTTACTGC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATGCAAAACATGGCAGTTaGATTGTCTGCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHAKHGS*IVCLAP
Trigger: AGGTGCTAAGCAGACAATTCAACTGCCATGTTTTGC...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCAAACAAAACAAGCTCTaGAAGTCTGCCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIKQNKL*KSASCS
Trigger: TGAGCAGGAGGCAGACTTGCAGAGCTTGTTTTGTTT...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTAAACAAAACAAGCTCTaGAAGTCTGCCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTKQNKL*KSASCS
Trigger: TGAGCAGGAGGCAGACTTGCAGAGCTTGTTTTGTTT...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGACCAGTCTGAAATACTaGCTTTATCACACTAAACTC +
Preference number: 4 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMTSLKY*LYHTKL
Trigger: GAGTTTAGTGTGATAAAGGCAGTATTTCAGACTGGT...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATTCACCCAGATTGGAGTaGAGTGGCAAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDSPRLE*SGKNTA
Trigger: AGCTGTGTTCTTGCCACTGCACTCCAATCTGGGTGA...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATGTGAAAGGAGAGTGGTaGCAAGTCATCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDVKGEW*QVISTG
Trigger: TCCTGTGGAGATGACTTGGCACCACTCTCCTTTCAC...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCTCAATTTCTCTGTCCTaGCTTAAATACACAAGGGTA +
Preference number: 4 (lower is better)
Translates to: TIPPDITGYPCHLGPLTISISLS*LKYTRV
Trigger: TACCCTTGTGTATTTAAGGCAGGACAGAGAAATTGA...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGTCTTCTGTGGGTTTTaGCCAGATGAGAGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIVFCGF*PDERSN
Trigger: GTTACTTCTCTCATCTGGGCAAAACCCACAGAAGAC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCACACCTGGCCTGTTTTaGGGATCTTTGCATGTTAGT +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSITPGLF*GSLHVS
Trigger: ACTAACATGCAAAGATCCCCAAAACAGGCCAGGTGT...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGAAAGGGACTCCATCTTaGTTATTACCCATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLKGTPS*LLPMSA
Trigger: GGCACTCATGGGTAATAACCAAGATGGAGTCCCTTT...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTTTATGTGGCAGAAGCTaGGAAGTCTTCTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTLCGRS*EVFCGF
Trigger: AAACCCACAGAAGACTTCCCAGCTTCTGCCACATAA...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGGACTAGGGAAACTGTaGGCGGGAGGGGCTTTATAC +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYGLGKL*AGGALY
Trigger: GTATAAAGCCCCTCCCGCTCACAGTTTCCCTAGTCC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCGCCTTATCAGTTGTGTaGGGAAATCCATTACTTGGT +
Preference number: 4 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIALSVV*GNPLLG
Trigger: ACCAAGTAATGGATTTCCGCACACAACTGATAAGGC...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGCCTTATCAGTTGTGTaGGGAAATCCATTACTTGGT +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLALSVV*GNPLLG
Trigger: ACCAAGTAATGGATTTCCGCACACAACTGATAAGGC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATATCACTGGGTATCCCTaGCATTTGGGCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYITGYP*HLGPLT
Trigger: GGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGAT...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATCACCAAGCCCGGCCATaGATGAGTTTTTATAGCATG +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDHQARP*MSFYSM
Trigger: CATGCTATAAAAACTCATCCATGGCCGGGCTTGGTG...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTCTTCCGTTGCCACATaGTACTCCATAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHSSVAT*YSIVLT
Trigger: TGTCAATACTATGGAGTACCATGTGGCAACGGAAGA...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTCTGTGTCTTTTATGTaGCAGAAGCTGGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLSVSFM*QKLGSL
Trigger: AAGACTTCCCAGCTTCTGCCACATAAAAGACACAGA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
3UTR CAA 72 bp CTGTGCATGCCTAAGTTTTGCCAAAGGGACTCCATCTaGGTTATTACCCATGAGTGCCTAAGCAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: LCMPKFCQRDSI*VITHECLSKTH
Trigger: ATGGGTTTTGCTTAGGCACTCATGGGTAATAACCAAGATGGAGTCCCTTTGGCAAAACTTAGGCATGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCAAGCTCTGCAAGTCTaGCTCCTGCTCAGCATACAG +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYQALQV*LLLSIQ
Trigger: CTGTATGCTGAGCAGGAGGCAGACTTGCAGAGCTTG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTTTATCCCACTTGCCTaGAGTAAGACTGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLFIPLA*SKTVMS
Trigger: ACTCATAACAGTCTTACTGCAGGCAAGTGGGATAAA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTACCCGGGCAGGAGTGCTaGATCCTAATTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLPGQEC*ILISTA
Trigger: GGCTGTGGAAATTAGGATGCAGCACTCCTGCCCGGG...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361066.7
CDS-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGGACTAGGGAAACTGTaGGCGGGAGGGGCTTTATAC +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLGLGKL*AGGALY
Trigger: GTATAAAGCCCCTCCCGCTCACAGTTTCCCTAGTCC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTAATGCATTCCCTTTTTaGTTTCTGGTCATATCATCG +
Preference number: 4 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTNAFPF*FLVISS
Trigger: CGATGATATGACCAGAAATCAAAAAGGGAATGCATT...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATCACACATGTTGTGCTTaGGAGCGATGTAGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHHTCCA*ERCSAR
Trigger: TCTTGCGCTACATCGCTCGCAAGCACAACATGTGTG...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATTGGGGAGTAGGGAAATaGCAGTATCGCAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYWGVGK*QYRSDS
Trigger: TGAATCGCTGCGATACTGGCATTTCCCTACTCCCCA...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTGTCATTACAGACAATaGCACAGTGAACATCTTAGT +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLCHYRQ*HSEHLS
Trigger: ACTAAGATGTTCACTGTGGCATTGTCTGTAATGACA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTACCAAAGGCTCCCCCATaGCCAAGATACTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLPKAPP*PRYWPE
Trigger: TTCAGGCCAGTATCTTGGGCATGGGGGAGCCTTTGG...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGTCCCTTTTTGATTTCTaGTCATATCATCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLSLFDF*SYHRSS
Trigger: GCTAGATCGATGATATGACCAGAAATCAAAAAGGGA...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATTCTGTGTCTTTTATGTaGCAGAAGCTGGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDSVSFM*QKLGSL
Trigger: AAGACTTCCCAGCTTCTGCCACATAAAAGACACAGA...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCCCTTACGGACAGGATaGAACAAAACAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYPLRTG*NKTSSA
Trigger: TGCAGAGCTTGTTTTGTTTCATCCTGTCCGTAAGGG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGCTAGCCCACCAGTCTaGAATACTGCCTTTATCACA +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYASPPV*NTAFIT
Trigger: TGTGATAAAGGCAGTATTTCAGACTGGTGGGCTAGC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATAGACTGAAAAACTTCTaGGCTTTATACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDRLKNF*ALYLFW
Trigger: CCAGAAGAGGTATAAAGCTCAGAAGTTTTTCAGTCT...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATTTCTATCCCTTCTCCTaGGACCTTCCCTCTCTATGT +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHFYPFS*DLPSLC
Trigger: ACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAA...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGCCCTTGAACTCAGTTaGGGAGTAGGGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLALELS*GVGKCQ
Trigger: CTGGCATTTCCCTACTCCCCAACTGAGTTCAAGGGC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATCACCAAGCCCGGCCATaGATGAGTTTTTATAGCATG +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHHQARP*MSFYSM
Trigger: CATGCTATAAAAACTCATCCATGGCCGGGCTTGGTG...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATCTGGTCTTAAACTCCTaGCCTCAACTGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYLVLNS*PQLILS
Trigger: TGAGAGGATCAGTTGAGGCCAGGAGTTTAAGACCAG...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATTCTGTGAAAGGAGAGTaGTGCCAAGTCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYSVKGE*CQVIST
Trigger: TGTGGAGATGACTTGGCACCACTCTCCTTTCACAGA...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGGGGGTGGCAAAACATaGCAGTTGAATTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYGGGKT*QLNCLL
Trigger: AAGCAGACAATTCAACTGCCATGTTTTGCCACCCCC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTACCTGCTCACAGGGGGTaGCAAAACATGGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLPAHRG*QNMAVE
Trigger: TTCAACTGCCATGTTTTGCCACCCCCTGTGAGCAGG...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTACCACAGGCCTATCTCTaGAGACTATTCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLPQAYL*RLFRLC
Trigger: GCAGAGTCTGAATAGTCTTCAGAGATAGGCCTGTGG...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATTGTCATTACAGACAATaGCACAGTGAACATCTTAGT +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDCHYRQ*HSEHLS
Trigger: ACTAAGATGTTCACTGTGGCATTGTCTGTAATGACA...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATAGACTATTCAGACTCTaGTCTGTGAAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHRLFRL*SVKGEW
Trigger: CCACTCTCCTTTCACAGAGCAGAGTCTGAATAGTCT...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGTCTTCTGTGGGTTTTaGCCAGATGAGAGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYVFCGF*PDERSN
Trigger: GTTACTTCTCTCATCTGGGCAAAACCCACAGAAGAC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATAAAGGGACTCCATCTTaGTTATTACCCATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHKGTPS*LLPMSA
Trigger: GGCACTCATGGGTAATAACCAAGATGGAGTCCCTTT...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATTTATGTGGCAGAAGCTaGGAAGTCTTCTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYLCGRS*EVFCGF
Trigger: AAACCCACAGAAGACTTCCCAGCTTCTGCCACATAA...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATATAGCATGGAATTGCTaGGTCATAGGATATGATTTA +
Preference number: 4 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDIAWNC*VIGYDL
Trigger: TAAATCATATCCTATGACCCAGCAATTCCATGCTAT...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATTCTTCCGTTGCCACATaGTACTCCATAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHSSVAT*YSIVLT
Trigger: TGTCAATACTATGGAGTACCATGTGGCAACGGAAGA...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGCAAAACATGGCAGTTaGATTGTCTGCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLAKHGS*IVCLAP
Trigger: AGGTGCTAAGCAGACAATTCAACTGCCATGTTTTGC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR GCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAAGACTATTCAGACTCTaGTCTGTGAAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLRLFRL*SVKGEW
Trigger: CCACTCTCCTTTCACAGAGCAGAGTCTGAATAGTCT...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp GTTAGAAAAGCAAGTCTTAGCCTTAACTTGGAAATGCCCTTTAACTTCCACCATACTTCTCCTACCCCGTaGTCACAAAAATTCTTACAT +
Preference number: 4 (lower is better)
Translates to: VRKASLSLNLEMPFNFHHTSPTP*SQKFLH
Trigger: ATGTAAGAATTTTTGTGACCACGGGGTAGGAGAAGT...ATGGTGGAAGTTAAAGGGCATTTCCAAGTTAAGGCTAAGACTTGCTTTTCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAAGACTGAAAAACTTCTaGGCTTTATACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLRLKNF*ALYLFW
Trigger: CCAGAAGAGGTATAAAGCTCAGAAGTTTTTCAGTCT...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR TCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAAATGCATTCCCTTTTTaGTTTCTGGTCATATCATCG +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLNAFPF*FLVISS
Trigger: CGATGATATGACCAGAAATCAAAAAGGGAATGCATT...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CCA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTATCCCTTTTTGATTTCTaGTCATATCATCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLSLFDF*SYHRSS
Trigger: GCTAGATCGATGATATGACCAGAAATCAAAAAGGGA...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS GCA 90 bp ACGCGCGGGCGCCCTGACTCCGCCTCCGCCCCGTTCTCCGTCCCTTaGCTCCGCGGCTCCACAGGGCCGTGCGCAGGCGCGACTAATGCC +
Preference number: 5 (lower is better)
Translates to: TRGRPDSASAPFSVP*LRGSTGPCAGATNA
Trigger: GGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAACGGGGCGGAGGCGGAGTCAGGGCGCCCGCGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS GCA 90 bp TCCGCCCCGTTCTCCGTCCCTTGCCTCCGCGGCTCCACAGGGCCGTaGGCAGGCGCGACTAATGCCGGCGTTGGGGTTCAGGGCCTGGCG +
Preference number: 5 (lower is better)
Translates to: SAPFSVPCLRGSTGP*AGATNAGVGVQGLA
Trigger: CGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAACGGGGCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS CCA 90 bp GGCCGTGCGCAGGCGCGACTAATGCCGGCGTTGGGGTTCAGGGCCTaGCGACCCCGAGGCGGGACCCGGGCAGGAGTGCTGCATCCTAAT +
Preference number: 5 (lower is better)
Translates to: GRAQARLMPALGFRA*RPRGGTRAGVLHPN
Trigger: ATTAGGATGCAGCACTCCTGCCCGGGTCCCGCCTCGGGGTCGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCGCGCCTGCGCACGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361066.7
CDS CCA 90 bp CCACAGGGCCCGCGATCCCAGAGGCTGGGCAGGGGTCGACATCCGTaGCTCGGCAGCTCGAAAAGGCTCCCGCGTAGAGCTGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PQGPRSQRLGRGRHP*LGSSKRLPRRAAPA
Trigger: AGCAGGAGCAGCTCTACGCGGGAGCCTTTTCGAGCTGCCGAGCCACGGATGTCGACCCCTGCCCAGCCTCTGGGATCGCGGGCCCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488824.1
CDS TCA 90 bp GGAGATCGCGGACCCAGAGACCCGCCCTCTCCGCGTCAGTCTCTTTaGCCGAGCGGCTCTACCGTTGAGACGGCACTCACCCCACGAATA +
Preference number: 5 (lower is better)
Translates to: GDRGPRDPPSPRQSL*PSGSTVETALTPRI
Trigger: TATTCGTGGGGTGAGTGCCGTCTCAACGGTAGAGCCGCTCGGTCAAAGAGACTGACGCGGAGAGGGCGGGTCTCTGGGTCCGCGATCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488824.1
CDS-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCCGACTAATGCCGGCGTaGGGGTTCAGGGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIRLMPA*GFRAWR
Trigger: TCGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCG...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGCGACTAATGCCGGCGTaGGGGTTCAGGGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLRLMPA*GFRAWR
Trigger: TCGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCG...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGCTCAGTCACCCAGATaGGAGTGCAGTGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMAQSPR*ECSGKN
Trigger: GTTCTTGCCACTGCACTCCAATCTGGGTGACTGAGC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATACCCACTCTCAGGGCTaGGGCATGAACCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDTHSQG*GMNLQP
Trigger: GGGCTGTAGGTTCATGCCCAAGCCCTGAGAGTGGGT...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp ACTATTCCTCCTGACATCACTGGGTATCCCTGCCATTTGGGCCCTCTGACCATCGGCAAAACATGGCAGTaGAATTGTCTGCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: TIPPDITGYPCHLGPLTIGKTWQ*NCLLST
Trigger: GGTGCTAAGCAGACAATTCAACTGCCATGTTTTGCC...GATGGTCAGAGGGCCCAAATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp CCAAGATACTGGCCTGAACACCTAATCCCTGCTCACAGGGGGTGGCAAAACATGGTACCACAGTTTTACTaGTGTTATCCTCACCCAGTC +
Preference number: 5 (lower is better)
Translates to: PRYWPEHLIPAHRGWQNMVPQFY*CYPHPV
Trigger: GACTGGGTGAGGATAACACAAGTAAAACTGTGGTAC...CATGTTTTGCCACCCCCTGTGAGCAGGGATTAGGTGTTCAGGCCAGTATCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp AGTTCCTTTCTATCCCTTCTCCTGAGACCTTCCCTCTCTATGTGCCTATCCATCCCTTCCTCAGCAGCCTaGCTGAAATGTCTGCCTATT +
Preference number: 5 (lower is better)
Translates to: SSFLSLLLRPSLSMCLSIPSSAA*LKCLPI
Trigger: AATAGGCAGACATTTCAGCAAGGCTGCTGAGGAAGG...GATGGATAGGCACATAGAGAGGGAAGGTCTCAGGAGAAGGGATAGAAAGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361066.7
CDS GCA 90 bp GAAAATACACCAAATCTTATAACGACCCCAACCCAGTCCAACAGATaGATACCAGAACAGCAACATTCACGTGTTGCCTGCGTCTACCTC +
Preference number: 5 (lower is better)
Translates to: ENTPNLITTPTQSNR*IPEQQHSRVACVYL
Trigger: GAGGTAGACGCAGGCAACACGTGAATGTTGCTGTTCTGGTATGCATCTGTTGGACTGGGTTGGGGTCGTTATAAGATTTGGTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476321.5
CDS-3UTR CAA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGACAGAGCCTTATCAGTaGTGTGCGGAAATCCATTAC +
Preference number: 5 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLTEPYQ*CAEIHY
Trigger: GTAATGGATTTCCGCACACAACTGATAAGGCTCTGT...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATACAGAGCCTTATCAGTaGTGTGCGGAAATCCATTAC +
Preference number: 5 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHTEPYQ*CAEIHY
Trigger: GTAATGGATTTCCGCACACAACTGATAAGGCTCTGT...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGGGTATCCCTGCCATTaGGGCCCTCTGACCATCACT +
Preference number: 5 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYGYPCH*GPLTIT
Trigger: AGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp CAGTTGGGGAGTAGGGAAATGCCAGTATCGCAGCGATTCAATTCATATCTTGATGGCAAAACATGGCAGTaGAATTGTCTGCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: QLGSREMPVSQRFNSYLDGKTWQ*NCLLST
Trigger: GGTGCTAAGCAGACAATTCAACTGCCATGTTTTGCC...ATCAAGATATGAATTGAATCGCTGCGATACTGGCATTTCCCTACTCCCCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp TTAGCACCTTCTGTCTGTACTATTCCTCCTGACATCACTGGGTATCCCTGCCATACGGTTTCCACTTATTaGTCATTACAGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: LAPSVCTIPPDITGYPCHTVSTY*SLQTMP
Trigger: TGGCATTGTCTGTAATGACAAATAAGTGGAAACCGT...ATGGCAGGGATACCCAGTGATGTCAGGAGGAATAGTACAGACAGAAGGTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGACGGTTTCCACTTATTaGTCATTACAGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLTVSTY*SLQTMP
Trigger: TGGCATTGTCTGTAATGACAAATAAGTGGAAACCGT...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGGGTATCCCTGCCATTaGGGCCCTCTGACCATCACT +
Preference number: 5 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLGYPCH*GPLTIT
Trigger: AGTGATGGTCAGAGGGCCCAAATGGCAGGGATACCC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp GTAAGGCGTCTGTGTTCTGTGTCTTTTATGTGGCAGAAGCTGGGAAGTCTTCTGGCTTTGTGTTTAATGTaGGGCCTTAAATTCCAGATT +
Preference number: 5 (lower is better)
Translates to: VRRLCSVSFMWQKLGSLLALCLM*GLKFQI
Trigger: AATCTGGAATTTAAGGCCCAACATTAAACACAAAGC...CAGAAGACTTCCCAGCTTCTGCCACATAAAAGACACAGAACACAGACGCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp CGCACCAAAGTTGGGATGGTCACTTCTGAGCAACATCCTAGCTTAAGGGTAACTGCTTTGTGTTTAATGTaGGGCCTTAAATTCCAGATT +
Preference number: 5 (lower is better)
Translates to: RTKVGMVTSEQHPSLRVTALCLM*GLKFQI
Trigger: AATCTGGAATTTAAGGCCCAACATTAAACACAAAGC...AGTTACCCTTAAGCTAGGATGTTGCTCAGAAGTGACCATCCCAACTTTGGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp TGGTACTCCATAGTATTGACAGGTATTTACACGGTTTCCACTTATTTGTCATTAGCTCAGTCACCCAGATaGGAGTGCAGTGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: WYSIVLTGIYTVSTYLSLAQSPR*ECSGKN
Trigger: GTTCTTGCCACTGCACTCCAATCTGGGTGACTGAGC...TAATGACAAATAAGTGGAAACCGTGTAAATACCTGTCAATACTATGGAGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATGTACCACAGTTTTACTaGTGTTATCCTCACCCAGTC +
Preference number: 5 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYVPQFY*CYPHPV
Trigger: GACTGGGTGAGGATAACACAAGTAAAACTGTGGTAC...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATAAGACTGTTATGAGTTaGGTGTTTCCCTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYKTVMS*VFPSRL
Trigger: GAGTCTGGAGGGAAACACCAAACTCATAACAGTCTT...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS-3UTR CAA 90 bp ACAAGGGTAGAGCATACCGCTCCCTCACACTATGGAAATTATATCAATAGTTATTTAATGAGTAAGCAATaGTCCCAACTCTATTGGCTA +
Preference number: 5 (lower is better)
Translates to: TRVEHTAPSHYGNYINSYLMSKQ*SQLYWL
Trigger: TAGCCAATAGAGTTGGGACAATTGCTTACTCATTAA...ATAACTATTGATATAATTTCCATAGTGTGAGGGAGCGGTATGCTCTACCCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS GCA 72 bp CGCCCTGACTCCGCCTCCGCCCCGTTCTCCGTCCCTTaGCTCCGCGGCTCCACAGGGCCGTGCGCAGGCGCG +
Preference number: 6 (lower is better)
Translates to: RPDSASAPFSVP*LRGSTGPCAGA
Trigger: CGCGCCTGCGCACGGCCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAACGGGGCGGAGGCGGAGTCAGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS CAA 90 bp TCCGCGGCTCCACAGGGCCGTGCGCAGGCGCGACTAATGCCGGCGTaGGGGTTCAGGGCCTGGCGACCCCGAGGCGGGACCCGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SAAPQGRAQARLMPA*GFRAWRPRGGTRAG
Trigger: TCCTGCCCGGGTCCCGCCTCGGGGTCGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCCGCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS CAA 72 bp CCACAGGGCCGTGCGCAGGCGCGACTAATGCCGGCGTaGGGGTTCAGGGCCTGGCGACCCCGAGGCGGGACC +
Preference number: 6 (lower is better)
Translates to: PQGRAQARLMPA*GFRAWRPRGGT
Trigger: GGTCCCGCCTCGGGGTCGCCAGGCCCTGAACCCCAACGCCGGCATTAGTCGCGCCTGCGCACGGCCCTGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS GCA 72 bp TTCTCCGTCCCTTGCCTCCGCGGCTCCACAGGGCCGTaGGCAGGCGCGACTAATGCCGGCGTTGGGGTTCAG +
Preference number: 6 (lower is better)
Translates to: FSVPCLRGSTGP*AGATNAGVGVQ
Trigger: CTGAACCCCAACGCCGGCATTAGTCGCGCCTGCGCACGGCCCTGTGGAGCCGCGGAGGCAAGGGACGGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256594.7
ENST00000361066.7
CDS CCA 72 bp CCGCGATCCCAGAGGCTGGGCAGGGGTCGACATCCGTaGCTCGGCAGCTCGAAAAGGCTCCCGCGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: PRSQRLGRGRHP*LGSSKRLPRRA
Trigger: AGCTCTACGCGGGAGCCTTTTCGAGCTGCCGAGCCACGGATGTCGACCCCTGCCCAGCCTCTGGGATCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488824.1
CDS TCA 72 bp GGACCCAGAGACCCGCCCTCTCCGCGTCAGTCTCTTTaGCCGAGCGGCTCTACCGTTGAGACGGCACTCACC +
Preference number: 6 (lower is better)
Translates to: GPRDPPSPRQSL*PSGSTVETALT
Trigger: GGTGAGTGCCGTCTCAACGGTAGAGCCGCTCGGTCAAAGAGACTGACGCGGAGAGGGCGGGTCTCTGGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488824.1
CDS CAA 72 bp CTCCGCGTCAGTCTCTTTGACCGAGCGGCTCTACCGTaGAGACGGCACTCACCCCACGAATATCCCAGTACC +
Preference number: 6 (lower is better)
Translates to: LRVSLFDRAALP*RRHSPHEYPST
Trigger: GGTACTGGGATATTCGTGGGGTGAGTGCCGTCTCAACGGTAGAGCCGCTCGGTCAAAGAGACTGACGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488824.1
CDS TCA 72 bp TCCTCCACTATGGATCTGCAGGTCCCAGGGGAGCTGTaGGTGTTTTATAGAGAAAGTGCAGAACGTCACCAA +
Preference number: 6 (lower is better)
Translates to: SSTMDLQVPGEL*VFYRESAERHQ
Trigger: TTGGTGACGTTCTGCACTTTCTCTATAAAACACTCACAGCTCCCCTGGGACCTGCAGATCCATAGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540225.2
CDS GCA 72 bp CCAAATCTTATAACGACCCCAACCCAGTCCAACAGATaGATACCAGAACAGCAACATTCACGTGTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PNLITTPTQSNR*IPEQQHSRVAC
Trigger: GCAGGCAACACGTGAATGTTGCTGTTCTGGTATGCATCTGTTGGACTGGGTTGGGGTCGTTATAAGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476321.5