RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197448

Ensembl transcript IDs: ENST00000358406.10, ENST00000409500.7, ENST00000436038.5, ENST00000442394.5, ENST00000443571.6, ENST00000473649.1, ENST00000479303.1, ENST00000489654.1, ENST00000494735.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTaGGCTTCTGGTCCCAGCCCCATCTCAGTCACTGTGGTTGGTCAG +
Preference number: 1 (lower is better)
Translates to: HKLSQTLVPSAVHSH*ASGPSPISVTVVGQ
Trigger: CTGACCAACCACAGTGACTGAGATGGGGCTGGGACCAGAAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 90 bp CGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTaGAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCA +
Preference number: 1 (lower is better)
Translates to: RSNSSQFPGTALPWF*RCGWTQFKYLATSS
Trigger: TGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 90 bp CCTTGCCCTGGTTTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTaGCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTC +
Preference number: 1 (lower is better)
Translates to: PCPGFAGVAGPSLNI*PQAQPDSGSLGCSL
Trigger: GAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 90 bp AGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTaGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACTCTGG +
Preference number: 1 (lower is better)
Translates to: SQFPGTALPWFCRCG*TQFKYLATSSARLW
Trigger: CCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 90 bp CCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTaGTTTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACA +
Preference number: 1 (lower is better)
Translates to: PNRSNSSQFPGTALP*FCRCGWTQFKYLAT
Trigger: TGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 90 bp TCAGAATCTGCACTGAGGGTTAAGGGAGGTATCTATGAAAGGGTGTaGAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTAC +
Preference number: 1 (lower is better)
Translates to: SESALRVKGGIYERV*NFPKPQQLQPVSRY
Trigger: GTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTTCATAGATACCTCCCTTAACCCTCAGTGCAGATTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 90 bp GGCATTGCTCCTGAAACTCCTCCGGGCTATGTAAGGCTCCGTACTTaGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATAC +
Preference number: 1 (lower is better)
Translates to: GIAPETPPGYVRLRT*FPTMDPSEVSASKY
Trigger: GTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCAAGTACGGAGCCTTACATAGCCCGGAGGAGTTTCAGGAGCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR TCA 90 bp TTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCACTTGTaGGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTC +
Preference number: 1 (lower is better)
Translates to: LFCGKAELGLSERHL*GIEVKVATWLMVDV
Trigger: GACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
3UTR TCA 90 bp GATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTaGAAGGCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCT +
Preference number: 1 (lower is better)
Translates to: DGIRFILWESRIGAL*KALVRHRSKGCHMA
Trigger: AGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
3UTR CCA 90 bp GAAGTCAAAATACTATTGAAACAAGGGATTCTGATCATTGCACAATaGGCACAGCTAGAGGCAGGGACTTTGGGTCAATTACTGGGGGAA +
Preference number: 1 (lower is better)
Translates to: EVKILLKQGILIIAQ*AQLEAGTLGQLLGE
Trigger: TTCCCCCAGTAATTGACCCAAAGTCCCTGCCTCTAGCTGTGCCCATTGTGCAATGATCAGAATCCCTTGTTTCAATAGTATTTTGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR TCA 90 bp GGGCTATGTAAGGCTCCGTACTTGGTTCCCAACAATGGATCCAAGTaGGGTTTCAGCTTCCAAATACAGAGTATTCTTAAAGAAGTCAAA +
Preference number: 1 (lower is better)
Translates to: GLCKAPYLVPNNGSK*GFSFQIQSILKEVK
Trigger: TTTGACTTCTTTAAGAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCAAGTACGGAGCCTTACATAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTGCTGTTCACTCCCACTaGGCTTCTGGTCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: ATPASFPVLPCPGFAGVAAVHSH*ASGPSP
Trigger: GGGGCTGGGACCAGAAGCCCAGTGGGAGTGAACAGC...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: ATPASFPVLPCPGFAGVAPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: VATWLMVDVFLASLGVGEKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR CCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAACCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: VATWLMVDVFLASLGVGEPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR CAA 90 bp ACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTaGCCCTGGTTTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTG +
Preference number: 2 (lower is better)
Translates to: TSPNRSNSSQFPGTA*PWFCRCGWTQFKYL
Trigger: CAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTGTTGCAAAGTCCATCTaGCTTGGTTTTCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLVAKSI*LGFLLL
Trigger: CAGCAACAGAAAACCAAGCCAGATGGACTTTGCAAC...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTCCAAACTTGATTAGTTaGAAAGTCCATCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLPNLIS*KVHLAW
Trigger: CCAAGCCAGATGGACTTTGCAACTAATCAAGTTTGG...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR CCA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 2 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGSPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR CCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTAAAGTCCATCTGGCTTaGTTTTCTGTTGCTGATAGA +
Preference number: 2 (lower is better)
Translates to: ATPASFPVLPCPGFAGVAKVHLA*FSVADR
Trigger: TCTATCAGCAACAGAAAACCAAGCCAGATGGACTTT...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp AAAGGGTGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTCTCAGTCACTGTGGTTaGTCAGAAGACAGTAAATCC +
Preference number: 2 (lower is better)
Translates to: KGCATSPNRSNSSQFPGTLSHCG*SEDSKS
Trigger: GGATTTACTGTCTTCTGACCAACCACAGTGACTGAG...AGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp GCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: ALVRHRSKGCHMANGGRLKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...AAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR GCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: AETSIFIHKTGSTHPALGKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCGCCTTGCCCTGGTTTTaGAGGTGTGGCTGGACCCAG +
Preference number: 2 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFALPWF*RCGWTQ
Trigger: CTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGC...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 2 (lower is better)
Translates to: AETSIFIHKTGSTHPALGSPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CCA 90 bp CTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 2 (lower is better)
Translates to: LVRHRSKGCHMANGGRLPSPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...AGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR CCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCGTAAGGCTCCGTACTTaGTTCCCAACAATGGATCCA +
Preference number: 2 (lower is better)
Translates to: AETSIFIHKTGSTHPALGVRLRT*FPTMDP
Trigger: TGGATCCATTGTTGGGAACCAAGTACGGAGCCTTAC...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CAA 90 bp GGGATTCTGATCATTGCACAATGGGCACAGCTAGAGGCAGGGACTTaGGGTCAATTACTGGGGGAATGGAAAAGTTATATGTATGTAGTA +
Preference number: 2 (lower is better)
Translates to: GILIIAQWAQLEAGT*GQLLGEWKSYMYVV
Trigger: TACTACATACATATAACTTTTCCATTCCCCCAGTAATTGACCCAAAGTCCCTGCCTCTAGCTGTGCCCATTGTGCAATGATCAGAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR GCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCTTTATACGAAGAGTTTaGTTCCTCCGGGCAATCTTA +
Preference number: 2 (lower is better)
Translates to: AETSIFIHKTGSTHPALGFIRRV*FLRAIL
Trigger: TAAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAA...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CAA 90 bp GTACTTAATTTGGAGATGTTCTTTTGCCATTACTTCACAGATAAGTaGGGTAAAGATGATTTTAAATCCTGGAGGATGCTAGAGACATGG +
Preference number: 2 (lower is better)
Translates to: VLNLEMFFCHYFTDK*GKDDFKSWRMLETW
Trigger: CCATGTCTCTAGCATCCTCCAGGATTTAAAATCATCTTTACCCAACTTATCTGTGAAGTAATGGCAAAAGAACATCTCCAAATTAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 72 bp CCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTaGCTTGCCCTGGTTTTGCAGGTGTGGCTGGACCCA +
Preference number: 3 (lower is better)
Translates to: PKPQQLQPVSRY*LALVLQVWLDP
Trigger: TGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 72 bp AGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTaGGCTTCTGGTCCCAGCCCCATCTCAGTCACTGTG +
Preference number: 3 (lower is better)
Translates to: SQTLVPSAVHSH*ASGPSPISVTV
Trigger: CACAGTGACTGAGATGGGGCTGGGACCAGAAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 72 bp TCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTaGAGGTGTGGCTGGACCCAGTTTAAATATCTGGCC +
Preference number: 3 (lower is better)
Translates to: SSQFPGTALPWF*RCGWTQFKYLA
Trigger: GGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 72 bp GGTTTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTaGCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGC +
Preference number: 3 (lower is better)
Translates to: GFAGVAGPSLNI*PQAQPDSGSLG
Trigger: GCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 72 bp CAGTTTAAATATCTGGCCACAAGCTCAGCCAGACTCTaGTTCCCTCGGCTGTTCACTCCCACTGGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: QFKYLATSSARL*FPRLFTPTGLL
Trigger: CAGAAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 72 bp GCACTGAGGGTTAAGGGAGGTATCTATGAAAGGGTGTaGAACTTCCCCAAACCGCAGCAACTCCAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: ALRVKGGIYERV*NFPKPQQLQPV
Trigger: AACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTTCATAGATACCTCCCTTAACCCTCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 72 bp AGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTaGTTTTGCAGGTGTGGCTGGACCCAGTTTAAATAT +
Preference number: 3 (lower is better)
Translates to: SNSSQFPGTALP*FCRCGWTQFKY
Trigger: ATATTTAAACTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CCA 72 bp CCTGAAACTCCTCCGGGCTATGTAAGGCTCCGTACTTaGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: PETPPGYVRLRT*FPTMDPSEVSA
Trigger: AGCTGAAACCTCACTTGGATCCATTGTTGGGAACCAAGTACGGAGCCTTACATAGCCCGGAGGAGTTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 72 bp GAGTTTCTCTATCAGATAGAGAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCC +
Preference number: 3 (lower is better)
Translates to: EFLYQIEKSESQ*LMVEPRVKQMA
Trigger: GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR TCA 72 bp GGCAGAGAAGCCTTGGAGTTTTCTCAGAATCTGCACTaGGGGTTAAGGGAGGTATCTATGAAAGGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: GREALEFSQNLH*GLREVSMKGCA
Trigger: TGCACACCCTTTCATAGATACCTCCCTTAACCCTCAGTGCAGATTCTGAGAAAACTCCAAGGCTTCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR GCA 72 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCC +
Preference number: 3 (lower is better)
Translates to: KYLYQIEKSESQ*LMVEPRVKQMA
Trigger: GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
3UTR-3UTR CAA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACTTTTATACGAAGAGTTaGCTTCCTCCGGGCAATCTT +
Preference number: 3 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDFYTKS*LPPGNL
Trigger: AAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAAA...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR-3UTR CAA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCTTAGGCAGAGAAGCCTaGGAGTTTTCTCAGAATCTG +
Preference number: 3 (lower is better)
Translates to: AETSIFIHKTGSTHPALGLGREA*EFSQNL
Trigger: CAGATTCTGAGAAAACTCCAAGGCTTCTCTGCCTAA...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR TCA 72 bp AGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTaGAAGGCACTTGTGAGGCATAGAAGTAAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: RFILWESRIGAL*KALVRHRSKGC
Trigger: GCAACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
3UTR CCA 72 bp ATCCCAAACTTGATTAGTTGCAAAGTCCATCTGGCTTaGTTTTCTGTTGCTGATAGAGAGACCAGGGGAGTT +
Preference number: 3 (lower is better)
Translates to: IPNLISCKVHLA*FSVADRETRGV
Trigger: AACTCCCCTGGTCTCTCTATCAGCAACAGAAAACCAAGCCAGATGGACTTTGCAACTAATCAAGTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR TCA 72 bp CTCCTCCTGATAGGTGTTCAAGTTGTTCACAATTTTTaGTATCCACATATAGTGCTGAGACAAGCATCTTTA +
Preference number: 3 (lower is better)
Translates to: LLLIGVQVVHNF*YPHIVLRQASL
Trigger: TAAAGATGCTTGTCTCAGCACTATATGTGGATATCAAAAATTGTGAACAACTTGAACACCTATCAGGAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp CTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTGCAGGGGCCCCATGCTaGAGGCTCCGGAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPQTAATPASFPVLPCPGAGAPC*RLRKSS
Trigger: ACTGCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGC...ACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp CACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGCGGCAGGGGCCCCATaGTGCAGGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HMANGGRLPGILGGRGKTAAGAP*CRLRKS
Trigger: GCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGCCGC...TGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCGCGGCAGGGGCCCCATaGTGCAGGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACAAGAP*CRLRKS
Trigger: GCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGCCGC...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACAGCGGCAGGGGCCCCATaGTGCAGGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: WLMVDVFLASLGVGERQTAAGAP*CRLRKS
Trigger: GCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGCCGC...TGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTGCTGTTCACTCCCACTaGGCTTCTGGTCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLAVHSH*ASGPSP
Trigger: GGGGCTGGGACCAGAAGCCCAGTGGGAGTGAACAGC...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAACCACATGGGCCACGGTaGTGGGCAGCCCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGEPHGPR*WAAQRL
Trigger: GAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGG...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACCACATGGGCCACGGTaGTGGGCAGCCCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLASLGVGERPHGPR*WAAQRL
Trigger: GAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGG...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTGCCGCCAGGATGCTCTaGGGCTCGGTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLAARML*GSVMSS
Trigger: TGAAGACATCACCGAGCCGCAGAGCATCCTGGCGGC...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CAA 72 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTaGGGGGTAGGGGAAAGACAGACAGCTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLAS*GVGERQTAPRA
Trigger: GGCCCTGGGAGCTGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp GGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACAGCTCCCAGCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: GGRLPGILGGRGKTDSSQPSSRR*GNAWQT
Trigger: TGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGG...CTGGGAGCTGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTGCAGGGGCCCCATGCTaGAGGCTCCGGAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFAGAPC*RLRKSS
Trigger: ACTGCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGC...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACGCAGGGGCCCCATGCTaGAGGCTCCGGAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MANGGRLPGILGGRGKTDAGAPC*RLRKSS
Trigger: ACTGCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGC...GTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACGCGGCAGGGGCCCCATaGTGCAGGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDAAGAP*CRLRKS
Trigger: GCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGCCGC...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTGGTACTGCCTTGCCCTaGTTTTGCAGGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLGTALP*FCRCGW
Trigger: CCAGCCACACCTGCAAAACCAGGGCAAGGCAGTACC...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: ATPASFPVLPCPGFAGVAPSSRR*GNAWQT
Trigger: TGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGG...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp GGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACAGCTCCCAGTGCTCTGCGGCTCGGTaGTGTCTTCATTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GGRLPGILGGRGKTDSSQCSAAR*CLHSLT
Trigger: GGTCAAGGAATGAAGACATCACCGAGCCGCAGAGCA...CTGGGAGCTGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000443571.6
CDS-3UTR GCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTGCGGCAGGGGCCCCATaGTGCAGGCTCCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPAAGAP*CRLRKS
Trigger: GCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGCCGC...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGAGCCGCCAGGATGCTCTaGGGCTCGGTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLASLGVGERAARML*GSVMSS
Trigger: TGAAGACATCACCGAGCCGCAGAGCATCCTGGCGGC...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTGAACCCGGCAGAGGCTaGCCAGCTTCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGEPGRG*PASGPA
Trigger: GGCAGGCCCAGAAGCTGGGCAGCCTCTGCCGGGTTC...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409500.7
CDS-3UTR GCA 90 bp CTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTCCCGGTACTGCCTTaGCCTGGTTTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LPQTAATPASFPVLPCPGFPVLP*PGFAGV
Trigger: CACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAA...ACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp CTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LPQTAATPASFPVLPCPGSGIHG*RYRAHP
Trigger: TGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGA...ACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAGGAGAGGGGTGTGACTaGGAGGACAGTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGEGEGCD*EDSRSP
Trigger: GGGGGATCTACTGTCCTCCCAGTCACACCCCTCTCC...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479303.1
CDS-3UTR TCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTCCACATGGGCCACGGTaGTGGGCAGCCCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGPHGPR*WAAQRL
Trigger: GAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGG...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTAAGTGGCATTGCTCCTaGAACTCCTCCGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LPQTAATPASFPVLPCPGKWHCS*NSSGLC
Trigger: ACATAGCCCGGAGGAGTTTCAGGAGCAATGCCACTT...ACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCGCAGGGGCCCCATGCTaGAGGCTCCGGAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGAGAPC*RLRKSS
Trigger: ACTGCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGC...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGCCGCCAGGATGCTCTaGGGCTCGGTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HMANGGRLPGILGGRGKTAARML*GSVMSS
Trigger: TGAAGACATCACCGAGCCGCAGAGCATCCTGGCGGC...TGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGAGCGGGGAAGCAGACCTaGAGGCTTGTTTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLASLGVGERAGKQT*RLVSTV
Trigger: GACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGC...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCGTTTGGCCATCCACATaGGCCACGGTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAVWPST*ATVMGS
Trigger: GCTGCCCATCACCGTGGCCCATGTGGATGGCCAAAC...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTGATGTCTTCATTCCTTaGCCAGACGCGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: ATPASFPVLPCPGFAGVADVFIP*PDAHPQ
Trigger: CTGTGGATGCGCGTCTGGTCAAGGAATGAAGACATC...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCCACATGGGCCACGGTaGTGGGCAGCCCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMPHGPR*WAAQRL
Trigger: GAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCAGGGGCCCCATGCTaGAGGCTCCGGAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMAGAPC*RLRKSS
Trigger: ACTGCTCTTCCGGAGCCTGCAGCATGGGGCCCCTGC...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAATCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGESSISG*SKFTAV
Trigger: CACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGA...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTCATACCAGCCTTCTCTaGAGCCGCCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFHTSLL*SRQDAL
Trigger: CAGAGCATCCTGGCGGCTGCAGAGAAGGCTGGTATG...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp ATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACGCGGGGAAGCAGACCTaGAGGCTTGTTTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: MANGGRLPGILGGRGKTDAGKQT*RLVSTV
Trigger: GACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGC...GTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR TCA 90 bp AGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SKGCHMANGGRLPGILGGPSSRR*GNAWQT
Trigger: TGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGG...ACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGAGATGTCTTCATTCCTTaGCCAGACGCGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLASLGVGERDVFIP*PDAHPQ
Trigger: CTGTGGATGCGCGTCTGGTCAAGGAATGAAGACATC...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000443571.6
CDS-3UTR TCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTCTGCGGCTCGGTaGTGTCTTCATTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMACSAAR*CLHSLT
Trigger: GGTCAAGGAATGAAGACATCACCGAGCCGCAGAGCA...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000442394.5
ENST00000443571.6
CDS-3UTR GCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGGCTGGGCCGCAACTaGAGGTTGATGTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGERLGRN*RLMFQI
Trigger: TATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCT...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFSSISG*SKFTAV
Trigger: CACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGA...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLLHLWR*DLFQKS
Trigger: GGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAG...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp AAAGGGTGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KGCATSPNRSNSSQFPGTSVSAG*LSGLLE
Trigger: CTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGA...AGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMASVSAG*LSGLLE
Trigger: CTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGA...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTCAAAGGCTCCGTATCTaGAGGCTGCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFQRLRI*RLPQWS
Trigger: AGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTG...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGTTCTCTCTCCGTATCTaGAGGCTGCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: CATSPNRSNSSQFPGTALFSLRI*RLPQWS
Trigger: AGACCACTGAGGCAGCCTGCAGATACGGAGAGAGAA...CAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACGCCTTGCCCTGGTTTTaGAGGTGTGGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDALPWF*RCGWTQ
Trigger: CTGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGC...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTTTGCCCAAGCTGGAGTaGAATAGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLLPKLE*NSAISA
Trigger: AGCTGAGATTGCACTATTGCACTCCAGCTTGGGCAA...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp TGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CATSPNRSNSSQFPGTALPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...CAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCAGCTCAGCCAGACTCTaGTTCCCTCGGCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACSSARL*FPRLFT
Trigger: AGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCT...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAPQWSP*AGSSPL
Trigger: CAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGG...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AAGGCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCCCCACACTCACCCTTaGCCAGACGCGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: KALVRHRSKGCHMANGGRPHTHP*PDAHPQ
Trigger: CTGTGGATGCGCGTCTGGTCAAGGGTGAGTGTGGGG...ACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479303.1
CDS-3UTR GCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTAGGCTGGGCCGCAACTaGAGGTTGATGTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFRLGRN*RLMFQI
Trigger: TATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCT...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTCAAAGGCTCCGTATCTaGAGGCTGCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SKGCHMANGGRLPGILGGQRLRI*RLPQWS
Trigger: AGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTG...ACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp GCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCCCACTGGGCTTAGGGATTCTGATCATTaGACAATGGGCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ATSSARLWFPRLFTPTGLRDSDH*TMGTAR
Trigger: TCTAGCTGTGCCCATTGTGCAATGATCAGAATCCCT...AAGCCCAGTGGGAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAPWGSG*ESGDGV
Trigger: GACACCATCTCCAGATTCCCATCCACTTCCCCAAGG...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTGTTTGGCCATCCACATaGGCCACGGTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPVWPST*ATVMGS
Trigger: GCTGCCCATCACCGTGGCCCATGTGGATGGCCAAAC...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPSGIHG*RYRAHP
Trigger: TGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGA...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCCTGATCATTGCACAATaGGCACAGCTAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACLIIAQ*AQLEAG
Trigger: CCCTGCCTCTAGCTGTGCCCATTGTGCAATGATCAG...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp AAAGGGTGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGGGGAAAATGGACTATaGGAAGAGCCAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: KGCATSPNRSNSSQFPGTGENGL*EEPDPE
Trigger: CTCTGGGTCTGGCTCTTCCCATAGTCCATTTTCCCC...AGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAGCCGCAACTGCAGGTTaGTGTTCCAGATATTCTGAT +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGEAATAG*CSRYSD
Trigger: ATCAGAATATCTGGAACATCAACCTGCAGTTGCGGC...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPPQWSP*AGSSPL
Trigger: CAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGG...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTCTTCTCTGCAGCCCTTaGCCAGACGCGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: QGHRKYLYQIEKSESQCLLLCSP*PDAHPQ
Trigger: CTGTGGATGCGCGTCTGGTCAAGGGCTGCAGAGAAG...AAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409500.7
CDS-3UTR GCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGCCGCCAGGATGCTCTaGGGCTCGGTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILAARML*GSVMSS
Trigger: TGAAGACATCACCGAGCCGCAGAGCATCCTGGCGGC...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTTCCCTGGGCTTGTTCTaGAGACATACCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPSLGLF*RHTSLL
Trigger: GAGAAGGCTGGTATGTCTGCAGAACAAGCCCAGGGA...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SKGCHMANGGRLPGILGGKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...ACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTTTTGCAGGTGTGGCTTTTTCCAGAAGTCCCTaGGCTTGTTCTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: ATPASFPVLPCPGFAGVAFSRSP*ACSADI
Trigger: TATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAA...AGCCACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGGTTTGGCCATCCACATaGGCCACGGTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKVWPST*ATVMGS
Trigger: GCTGCCCATCACCGTGGCCCATGTGGATGGCCAAAC...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAGGCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTGTTTGGCCATCCACATaGGCCACGGTGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KALVRHRSKGCHMANGGRVWPST*ATVMGS
Trigger: GCTGCCCATCACCGTGGCCCATGTGGATGGCCAAAC...ACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp TGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACAAATAACATGTGGGTTTaGCCATCCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: WLMVDVFLASLGVGERQTNNMWV*PSTWAT
Trigger: CGTGGCCCATGTGGATGGCCAAACCCACATGTTATT...TGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAGAGCCAAATAACATGTaGGTTTGGCCATCCACATGG +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGEEPNNM*VWPSTW
Trigger: CCATGTGGATGGCCAAACCCACATGTTATTTGGCTC...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTTGCTCTGCGGCTCGGTaGTGTCTTCATTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVCSAAR*CLHSLT
Trigger: GGTCAAGGAATGAAGACATCACCGAGCCGCAGAGCA...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000442394.5
ENST00000443571.6
CDS-3UTR GCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDPCIVL*GEADLE
Trigger: CTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGG...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVSSISG*SKFTAV
Trigger: CACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGA...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMSVSAG*LSGLLE
Trigger: CTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGA...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVSVSAG*LSGLLE
Trigger: CTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGA...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPSVSAG*LSGLLE
Trigger: CTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGA...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTCAAAGGCTCCGTATCTaGAGGCTGCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPQRLRI*RLPQWS
Trigger: AGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTG...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTATGACCCTGAAAACGTaGCTGGGGAAGGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPMTLKT*LGKVRK
Trigger: CTTTCTGACCTTCCCCAGGCACGTTTTCAGGGTCAT...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479303.1
CDS-3UTR CCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGGCGGGGAAGCAGACCTaGAGGCTTGTTTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKAGKQT*RLVSTV
Trigger: GACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGC...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDPWGSG*ESGDGV
Trigger: GACACCATCTCCAGATTCCCATCCACTTCCCCAAGG...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp ATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACGTAAAGGTTGCCACATaGCTAATGGTGGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: MANGGRLPGILGGRGKTDVKVAT*LMVDVF
Trigger: GAAGACGTCCACCATTAGCCATGTGGCAACCTTTAC...GTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAAGGGTGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTCCCAGTTTAAATATCTaGCCACAAGCTCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KGCATSPNRSNSSQFPGTPSLNI*PQAQPD
Trigger: GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGG...AGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGAPSSRR*GNAWQT
Trigger: TGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGG...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMPQWSP*AGSSPL
Trigger: CAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAATCTGAAAGGCACTTGTaGGGCATAGAAGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: VATWLMVDVFLASLGVGESERHL*GIEVKV
Trigger: AACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGA...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTAGAATTGGGGCTCTCTaGAAGGCACTTGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGRIGAL*KALVRH
Trigger: ATGCCTCACAAGTGCCTTTCAGAGAGCCCCAATTCT...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAGGCTGGGCCGCAACTaGAGGTTGATGTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVRLGRN*RLMFQI
Trigger: TATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCT...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPPCIVL*GEADLE
Trigger: CTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGG...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVPCIVL*GEADLE
Trigger: CTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGG...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR GCA 90 bp CAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QGHRKYLYQIEKSESQCLSSISG*SKFTAV
Trigger: CACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGA...AAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTTCCCTGGGCTTGTTCTaGAGACATACCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVSLGLF*RHTSLL
Trigger: GAGAAGGCTGGTATGTCTGCAGAACAAGCCCAGGGA...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPLHLWR*DLFQKS
Trigger: GGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAG...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTCAAAGGCTCCGTATCTaGAGGCTGCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILQRLRI*RLPQWS
Trigger: AGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTG...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACTGGTTCCACTCACCCTaGTCTGGGCAGCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDWFHSP*SGQLSF
Trigger: AAAACTAAGCTGCCCAGAGCAGGGTGAGTGGAACCA...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCGCGGGGAAGCAGACCTaGAGGCTTGTTTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGAAGKQT*RLVSTV
Trigger: GACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGC...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCATGGGAATCTGGAGATaGTGTCTCAGGAGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACMGIWR*CLRSFK
Trigger: CTTAAAGCTCCTGAGACACCATCTCCAGATTCCCAT...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CCA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCCAGACAAGAAATCCTTaGGGAAGTGGATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAQTRNP*GSGWES
Trigger: AGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTG...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCCAGACAAGAAATCCTTaGGGAAGTGGATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACQTRNP*GSGWES
Trigger: AGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTG...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTTCCAGAAGTCCCTaGGCTTGTTCTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: KSESQCLMVEPRVKQMACFSRSP*ACSADI
Trigger: TATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAA...GCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILSGIHG*RYRAHP
Trigger: TGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGA...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMSPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCGTGGGAAAGCAGAATTaGGGCTCTCTGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGVGKQN*GSLKGT
Trigger: AGTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCAC...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CCA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTCTTGGTTCCCAACAATaGATCCAAGTGAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SESQCLMVEPRVKQMACFLGSQQ*IQVRFQ
Trigger: CTGAAACCTCACTTGGATCCATTGTTGGGAACCAAG...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTATGTTCCAGATATTCTaGTACCGGCACAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGMFQIF*YRHRIS
Trigger: CGAGATCCTGTGCCGGTATCAGAATATCTGGAACAT...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTGCCGCAACTGCAGGTTaGTGTTCCAGATATTCTGAT +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGAATAG*CSRYSD
Trigger: ATCAGAATATCTGGAACATCAACCTGCAGTTGCGGC...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGACCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGPSSRR*GNAWQT
Trigger: TGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGG...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AAGGCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: KALVRHRSKGCHMANGGRPQWSP*AGSSPL
Trigger: CAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGG...ACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTG +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKPQWSP*AGSSPL
Trigger: CAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGG...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGAGGCTGGGCCGCAACTaGAGGTTGATGTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKRLGRN*RLMFQI
Trigger: TATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCT...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTAGGCTGGGCCGCAACTaGAGGTTGATGTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILRLGRN*RLMFQI
Trigger: TATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCT...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILPCIVL*GEADLE
Trigger: CTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGG...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp CTGATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCATACCAGCCTTCTCTaGAGCCGCCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: LMALGLFCGKAELGLSERHTSLL*SRQDAL
Trigger: CAGAGCATCCTGGCGGCTGCAGAGAAGGCTGGTATG...CCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGACATACCAGCCTTCTCTaGAGCCGCCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGHTSLL*SRQDAL
Trigger: CAGAGCATCCTGGCGGCTGCAGAGAAGGCTGGTATG...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCACCATACCAGCCTTCTCTaGAGCCGCCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: MALGLFCGKAELGLSERHHTSLL*SRQDAL
Trigger: CAGAGCATCCTGGCGGCTGCAGAGAAGGCTGGTATG...GTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGTCCCTGGGCTTGTTCTaGAGACATACCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKSLGLF*RHTSLL
Trigger: GAGAAGGCTGGTATGTCTGCAGAACAAGCCCAGGGA...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAGGTGTGAGCCACCGTaGTGGCCCTCATATACAATT +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVRCEPP*WPSYTI
Trigger: AATTGTATATGAGGGCCAGCACGGTGGCTCACACCT...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp CTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVRHRSKGCHMANGGRLPPWGSG*ESGDGV
Trigger: GACACCATCTCCAGATTCCCATCCACTTCCCCAAGG...AGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CCA 90 bp CAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: QGHRKYLYQIEKSESQCLPWGSG*ESGDGV
Trigger: GACACCATCTCCAGATTCCCATCCACTTCCCCAAGG...AAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTAATAACATGTGGGTTTaGCCATCCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPNNMWV*PSTWAT
Trigger: CGTGGCCCATGTGGATGGCCAAACCCACATGTTATT...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGAATAACATGTGGGTTTaGCCATCCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVNNMWV*PSTWAT
Trigger: CGTGGCCCATGTGGATGGCCAAACCCACATGTTATT...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALVRHRSKGCHMANGGRLPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...AAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTCCCAGTGCCTTATGGTaGAGCCAAGGGTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HRSKGCHMANGGRLPGILPSALW*SQGLSR
Trigger: TCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGG...AAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTATGTTCCAGATATTCTaGTACCGGCACAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVMFQIF*YRHRIS
Trigger: CGAGATCCTGTGCCGGTATCAGAATATCTGGAACAT...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCGATGTCTTCATTCCTTaGCCAGACGCGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGADVFIP*PDAHPQ
Trigger: CTGTGGATGCGCGTCTGGTCAAGGAATGAAGACATC...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000443571.6
CDS-3UTR TCA 90 bp GCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTAGAATTGGGGCTCTCTaGAAGGCACTTGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALVRHRSKGCHMANGGRLRIGAL*KALVRH
Trigger: ATGCCTCACAAGTGCCTTTCAGAGAGCCCCAATTCT...AAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp ATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCACTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: MALGLFCGKAELGLSERHSSISG*SKFTAV
Trigger: CACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGA...GTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVLHLWR*DLFQKS
Trigger: GGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAG...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMLHLWR*DLFQKS
Trigger: GGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPLHLWR*DLFQKS
Trigger: GGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAG...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp ATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACTTTATACGAAGAGTTTaGTTCCTCCGGGCAATCTTA +
Preference number: 4 (lower is better)
Translates to: MANGGRLPGILGGRGKTDFIRRV*FLRAIL
Trigger: TAAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAA...GTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMLVLHL*RCDLFQ
Trigger: CTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGGAGCCAAATAACATGTaGGTTTGGCCATCCACATGG +
Preference number: 4 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVEPNNM*VWPSTW
Trigger: CCATGTGGATGGCCAAACCCACATGTTATTTGGCTC...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: HRKYLYQIEKSESQCLMVSGIHG*RYRAHP
Trigger: TGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGA...CACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RKYLYQIEKSESQCLMVESGIHG*RYRAHP
Trigger: TGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGA...CTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGASPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTGTAAAGGTTGCCACATaGCTAATGGTGGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVVKVAT*LMVDVF
Trigger: GAAGACGTCCACCATTAGCCATGTGGCAACCTTTAC...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGAATTAGGTTTATTTTGTaGGAAAGCAGAATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ATWLMVDVFLASLGVGERIRFIL*ESRIGA
Trigger: AGCCCCAATTCTGCTTTCCCACAAAATAAACCTAAT...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR TCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGGCCGCAACTGCAGGTTaGTGTTCCAGATATTCTGAT +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKAATAG*CSRYSD
Trigger: ATCAGAATATCTGGAACATCAACCTGCAGTTGCGGC...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACCCAAACTTGATTAGTTaGAAAGTCCATCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDPNLIS*KVHLAW
Trigger: CCAAGCCAGATGGACTTTGCAACTAATCAAGTTTGG...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCCCAGTTTCCCGGTACTaGCTTGCCCTGGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFPVSRY*LALVLQ
Trigger: CTGCAAAACCAGGGCAAGGCAGTACCGGGAAACTGG...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCATCTATGAAAGGGTGTaGAACTTCCCCAAACCGCAG +
Preference number: 4 (lower is better)
Translates to: AETSIFIHKTGSTHPALGIYERV*NFPKPQ
Trigger: CTGCGGTTTGGGGAAGTTGCACACCCTTTCATAGAT...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCGGGATTACAGGCACGTaGCACCACACCCGGTTACTT +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFGITGT*HHTRLL
Trigger: AAGTAACCGGGTGTGGTGGCACGTGCCTGTAATCCC...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGTTTTCCAGAAGTCCCTaGGCTTGTTCTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMFSRSP*ACSADI
Trigger: TATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAA...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AETSIFIHKTGSTHPALGLVLHL*RCDLFQ
Trigger: CTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAG...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp CTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGAGCCAAATAACATGTaGGTTTGGCCATCCACATGG +
Preference number: 4 (lower is better)
Translates to: LVRHRSKGCHMANGGRLPEPNNM*VWPSTW
Trigger: CCATGTGGATGGCCAAACCCACATGTTATTTGGCTC...AGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGAGTCCCAGTGCCTTATaGTGGAGCCAAGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: RKYLYQIEKSESQCLMVESPSAL*WSQGLS
Trigger: GCTTAACCCTTGGCTCCACCATAAGGCACTGGGACT...CTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAGGCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTGTAAAGGTTGCCACATaGCTAATGGTGGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: KALVRHRSKGCHMANGGRVKVAT*LMVDVF
Trigger: GAAGACGTCCACCATTAGCCATGTGGCAACCTTTAC...ACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCGTGGGAAAGCAGAATTaGGGCTCTCTGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGAVGKQN*GSLKGT
Trigger: AGTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCAC...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CCA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTCTCAGTCACTGTGGTTaGTCAGAAGACAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVLSHCG*SEDSKS
Trigger: GGATTTACTGTCTTCTGACCAACCACAGTGACTGAG...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGGTAAGGCTCCGTACTTaGTTCCCAACAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKVRLRT*FPTMDP
Trigger: TGGATCCATTGTTGGGAACCAAGTACGGAGCCTTAC...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAATGTTCCAGATATTCTaGTACCGGCACAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPMFQIF*YRHRIS
Trigger: CGAGATCCTGTGCCGGTATCAGAATATCTGGAACAT...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAGCCGCAACTGCAGGTTaGTGTTCCAGATATTCTGAT +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPAATAG*CSRYSD
Trigger: ATCAGAATATCTGGAACATCAACCTGCAGTTGCGGC...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp TTTGCAGGTGTGGCTGGACCCAGTTTAAATATCTGGCCACAAGCTCAGCCAGACAACAATGGATCCAAGTaGGGTTTCAGCTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: FAGVAGPSLNIWPQAQPDNNGSK*GFSFQI
Trigger: TATTTGGAAGCTGAAACCTCACTTGGATCCATTGTT...GTCTGGCTGAGCTTGTGGCCAGATATTTAAACTGGGTCCAGCCACACCTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCTCCCTGGGCTTGTTCTaGAGACATACCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFSLGLF*RHTSLL
Trigger: GAGAAGGCTGGTATGTCTGCAGAACAAGCCCAGGGA...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTTTATACGAAGAGTTTaGTTCCTCCGGGCAATCTTA +
Preference number: 4 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGFIRRV*FLRAIL
Trigger: TAAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAA...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCAAATCCGAGTCCCAGTaGCTTATGGTGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFKSESQ*LMVEPR
Trigger: CCTTGGCTCCACCATAAGGCACTGGGACTCGGATTT...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCATAGAAGTAAAGGTTaGCACATGGCTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMHRSKG*HMANGG
Trigger: TCCACCATTAGCCATGTGGCAACCTTTACTTCTATG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGALVLHL*RCDLFQ
Trigger: CTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAG...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCACTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPLVLHL*RCDLFQ
Trigger: CTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAG...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAAATAACATGTGGGTTTaGCCATCCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGNNMWV*PSTWAT
Trigger: CGTGGCCCATGTGGATGGCCAAACCCACATGTTATT...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGGTTGCAAAGTCCATCTaGCTTGGTTTTCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKVAKSI*LGFLLL
Trigger: CAGCAACAGAAAACCAAGCCAGATGGACTTTGCAAC...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCTGTGAGCCACCGTGCTaGCCCTCATATACAATTTTT +
Preference number: 4 (lower is better)
Translates to: AETSIFIHKTGSTHPALGCEPPC*PSYTIF
Trigger: AAAAATTGTATATGAGGGCCAGCACGGTGGCTCACA...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp ATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCACATGTTCCAGATATTCTaGTACCGGCACAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: MALGLFCGKAELGLSERHMFQIF*YRHRIS
Trigger: CGAGATCCTGTGCCGGTATCAGAATATCTGGAACAT...GTGCCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR TCA 90 bp AGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGGCCGCAACTGCAGGTTaGTGTTCCAGATATTCTGAT +
Preference number: 4 (lower is better)
Translates to: RKYLYQIEKSESQCLMVEAATAG*CSRYSD
Trigger: ATCAGAATATCTGGAACATCAACCTGCAGTTGCGGC...CTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCATTTTCCAGAAGTCCCTaGGCTTGTTCTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPFSRSP*ACSADI
Trigger: TATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAA...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp AGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RKYLYQIEKSESQCLMVELVLHL*RCDLFQ
Trigger: CTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAG...CTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCATGTTCCAGATATTCTaGTACCGGCACAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFMFQIF*YRHRIS
Trigger: CGAGATCCTGTGCCGGTATCAGAATATCTGGAACAT...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCATCTGAAAGGCACTTGTaGGGCATAGAAGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPSERHL*GIEVKV
Trigger: AACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGA...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCTCTGAAAGGCACTTGTaGGGCATAGAAGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KIPLSDREIRVPVPYGGASERHL*GIEVKV
Trigger: AACCTTTACTTCTATGCCTCACAAGTGCCTTTCAGA...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR TCA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCTCTCAGAATCTGCACTaGGGGTTAAGGGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFSQNLH*GLREVS
Trigger: AGATACCTCCCTTAACCCTCAGTGCAGATTCTGAGA...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR TCA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGCCCATGAAACTCCTTTaGAGAAAAGGAGTACTTAAT +
Preference number: 4 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMPMKLL*RKGVLN
Trigger: ATTAAGTACTCCTTTTCTTCAAAGGAGTTTCATGGG...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR GCA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGTTTATACGAAGAGTTTaGTTCCTCCGGGCAATCTTA +
Preference number: 4 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKFIRRV*FLRAIL
Trigger: TAAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAA...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCACATAGAAGTAAAGGTTaGCACATGGCTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPHRSKG*HMANGG
Trigger: TCCACCATTAGCCATGTGGCAACCTTTACTTCTATG...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGACAGACAAGAAATCCTTaGGGAAGTGGATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGQTRNP*GSGWES
Trigger: AGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTG...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CCA 90 bp CTGATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGTTTTCCAGAAGTCCCTaGGCTTGTTCTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: LMALGLFCGKAELGLSERFSRSP*ACSADI
Trigger: TATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAA...CCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CCA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTATTAGGTTTATTTTGTaGGAAAGCAGAATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPIRFIL*ESRIGA
Trigger: AGCCCCAATTCTGCTTTCCCACAAAATAAACCTAAT...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR GCA 90 bp AAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCATTTATACGAAGAGTTTaGTTCCTCCGGGCAATCTTA +
Preference number: 4 (lower is better)
Translates to: KYLYQIEKSESQCLMVEPFIRRV*FLRAIL
Trigger: TAAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAA...TGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR GCA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGACATAGAAGTAAAGGTTaGCACATGGCTAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGHRSKG*HMANGG
Trigger: TCCACCATTAGCCATGTGGCAACCTTTACTTCTATG...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CCA 90 bp GCTGAGACAAGCATCTTTATTCATAAAACTGGTTCCACTCACCCTGCTCTGGGCCTTTGGGTCAATTACTaGGGGAATGGAAAAGTTATA +
Preference number: 4 (lower is better)
Translates to: AETSIFIHKTGSTHPALGLWVNY*GNGKVI
Trigger: TATAACTTTTCCATTCCCCCAGTAATTGACCCAAAG...GCCCAGAGCAGGGTGAGTGGAACCAGTTTTATGAATAAAGATGCTTGTCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442394.5
3UTR CAA 72 bp TTGGAGATGTTCTTTTGCCATTACTTCACAGATAAGTaGGGTAAAGATGATTTTAAATCCTGGAGGATGCTA +
Preference number: 4 (lower is better)
Translates to: LEMFFCHYFTDK*GKDDFKSWRML
Trigger: TAGCATCCTCCAGGATTTAAAATCATCTTTACCCAACTTATCTGTGAAGTAATGGCAAAAGAACATCTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS CCA 90 bp GCAGAGGGCAGCTTTCTGGCTGCCAGTGCCAATATAAGGACCCGCTaGGGTCGGCTCTCTTGGGCCACTGAGATCACCCCTGCCCCGACC +
Preference number: 5 (lower is better)
Translates to: AEGSFLAASANIRTR*GRLSWATEITPAPT
Trigger: GGTCGGGGCAGGGGTGATCTCAGTGGCCCAAGAGAGCCGACCCCAGCGGGTCCTTATATTGGCACTGGCAGCCAGAAAGCTGCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS CCA 90 bp TGCGCCAGCAGCTCCATCCGGTCAGAGCCAAATAACATGTGGGTTTaGCCATCCACATGGGCCACGGTGATGGGCAGCCCAAAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: CASSSIRSEPNNMWV*PSTWATVMGSPKAP
Trigger: CGGAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGGATGGCCAAACCCACATGTTATTTGGCTCTGACCGGATGGAGCTGCTGGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 90 bp GGGCAGAGGCACCCAGAGGCAGGGCTCCTCTTGCTGCTTTCCTGGTaGAGGACTAGCTCTTCCTTGCTTCTGACATCCCCCAGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GQRHPEAGLLLLLSW*RTSSSLLLTSPRAP
Trigger: AGGAGCTCTGGGGGATGTCAGAAGCAAGGAAGAGCTAGTCCTCCACCAGGAAAGCAGCAAGAGGAGCCCTGCCTCTGGGTGCCTCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 90 bp GTGGGGCAGAGGCACCCAGAGGCAGGGCTCCTCTTGCTGCTTTCCTaGTGGAGGACTAGCTCTTCCTTGCTTCTGACATCCCCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VGQRHPEAGLLLLLS*WRTSSSLLLTSPRA
Trigger: AGCTCTGGGGGATGTCAGAAGCAAGGAAGAGCTAGTCCTCCACCAGGAAAGCAGCAAGAGGAGCCCTGCCTCTGGGTGCCTCTGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 90 bp AGCAGGTGCGCCAGCAGCTCCATCCGGTCAGAGCCAAATAACATGTaGGTTTGGCCATCCACATGGGCCACGGTGATGGGCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SRCASSSIRSEPNNM*VWPSTWATVMGSPK
Trigger: CTTTGGGCTGCCCATCACCGTGGCCCATGTGGATGGCCAAACCCACATGTTATTTGGCTCTGACCGGATGGAGCTGCTGGCGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS TCA 90 bp GGGACGCTTTCTCCAGCATCTCTGGATGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACAAACTTCCTGTGGGGCAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: GTLSPASLDAPSSRR*GNAWQTNFLWGRGT
Trigger: GGTGCCTCTGCCCCACAGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGAAAGCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS-3UTR CAA 90 bp CTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTGCCTTGCCCTGGTCAGAAGTCCCTGGGCTaGTTCTGCAGACATACCAGC +
Preference number: 5 (lower is better)
Translates to: LPQTAATPASFPVLPCPGQKSLG*FCRHTS
Trigger: GCTGGTATGTCTGCAGAACAAGCCCAGGGACTTCTG...ACCAGGGCAAGGCAGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS GCA 90 bp ACGCGCATCCACAGCTCCCGGGACGCTTTCTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTGAGGAAACGCATGGCAGACAAACTT +
Preference number: 5 (lower is better)
Translates to: TRIHSSRDAFSSISG*SKFTAVRKRMADKL
Trigger: AAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGAAAGCGTCCCGGGAGCTGTGGATGCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS GCA 90 bp CTCCGCCCTCAGCCTCTCACCCAAGGTTCCCATGACCTATTTGCCTaGTCTTCTTCCCTTTCATGCCCGGCAACCTTCAGCTCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LRPQPLTQGSHDLFA*SSSLSCPATFSSLK
Trigger: CTTGAGCGAGCTGAAGGTTGCCGGGCATGAAAGGGAAGAAGAGCAGGCAAATAGGTCATGGGAACCTTGGGTGAGAGGCTGAGGGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 90 bp GTTGGGCTAAGAGGTGGCCGTGTTCTGCATTTCTCCCTGAATGTTTaGAGCCGCCCCTCTTTCCACCACCGTGGGAAACTGCAGTCGGGA +
Preference number: 5 (lower is better)
Translates to: VGLRGGRVLHFSLNV*SRPSFHHRGKLQSG
Trigger: TCCCGACTGCAGTTTCCCACGGTGGTGGAAAGAGGGGCGGCTCCAAACATTCAGGGAGAAATGCAGAACACGGCCACCTCTTAGCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CCA 90 bp AGAGTTTGCTTCCTCCGGGCAATCTTAAAGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCACTTCTCTCCCAGCAGGTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RVCFLRAILKSGIHG*RYRAHPLLSQQVRQ
Trigger: CTGGCGCACCTGCTGGGAGAGAAGTGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGACTTTAAGATTGCCCGGAGGAAGCAAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS-3UTR CAA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCGTCTTCCTGGCATCCTaGGGGGTAGGGGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAVFLAS*GVGERQ
Trigger: CTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGAC...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCGCCCCACACTCACCCTaGACCAGACGCGCATCCACA +
Preference number: 5 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGAPHSP*TRRAST
Trigger: TGTGGATGCGCGTCTGGTCAAGGGTGAGTGTGGGGC...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479303.1
CDS TCA 90 bp GCAGCCCAAAGGCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: AAQRLRICRLPQWSP*AGSSPLALRSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 90 bp CCAAAGGCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTGAGCTaGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PKAPYLQAASVVSLS*FFTFGVAIFSRSPW
Trigger: CCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS-3UTR CAA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCCAGAAGTCCCTGGGCTaGTTCTGCAGACATACCAGC +
Preference number: 5 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAQKSLG*FCRHTS
Trigger: GCTGGTATGTCTGCAGAACAAGCCCAGGGACTTCTG...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTCAGAAGTCCCTGGGCTaGTTCTGCAGACATACCAGC +
Preference number: 5 (lower is better)
Translates to: SESQCLMVEPRVKQMACFQKSLG*FCRHTS
Trigger: GCTGGTATGTCTGCAGAACAAGCCCAGGGACTTCTG...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp GCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGAGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: ATWLMVDVFLASLGVGERASVVS*SWFFTF
Trigger: AAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGC...TCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTCCTTCTCTGCAGCCCTaGACCAGACGCGCATCCACA +
Preference number: 5 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGPSLQP*TRRAST
Trigger: TGTGGATGCGCGTCTGGTCAAGGGCTGCAGAGAAGG...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409500.7
CDS-3UTR CAA 90 bp TTAAATATCTGGCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCTGCCTTGCCCTGGTTTaGCAGGTGTGGCTGGACCCA +
Preference number: 5 (lower is better)
Translates to: LNIWPQAQPDSGSLGCSLCLALV*QVWLDP
Trigger: TGGGTCCAGCCACACCTGCAAAACCAGGGCAAGGCA...GAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS TCA 90 bp GTTATGAGGCTGGGCCGCAACTGCAGGTTGATGTTCCAGATATTCTaGTACCGGCACAGGATCTGCGGGCAGAGGTCAAGAACGATTGCC +
Preference number: 5 (lower is better)
Translates to: VMRLGRNCRLMFQIF*YRHRICGQRSRTIA
Trigger: GGCAATCGTTCTTGACCTCTGCCCGCAGATCCTGTGCCGGTATCAGAATATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCTCATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS GCA 90 bp GGCTGCCTCAGTGGTCTCCTTGAGCTGGTTCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCCCTGGGCTTGTTCTGCAGACATACC +
Preference number: 5 (lower is better)
Translates to: GCLSGLLELVLHLWR*DLFQKSLGLFCRHT
Trigger: GGTATGTCTGCAGAACAAGCCCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS GCA 90 bp ACCCAAGGTTCCCATGACCTATTTGCCTGCTCTTCTTCCCTTTCATaGCCGGCAACCTTCAGCTCGCTCAAGGCTGATCCTGAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: TQGSHDLFACSSSLS*PATFSSLKADPEVS
Trigger: GGAAACCTCAGGATCAGCCTTGAGCGAGCTGAAGGTTGCCGGGCATGAAAGGGAAGAAGAGCAGGCAAATAGGTCATGGGAACCTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 90 bp TCTGCAGGCTGCCTCAGTGGTCTCCTTGAGCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAGAAGTCCCTGGGCTTGTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SAGCLSGLLELVLHL*RCDLFQKSLGLFCR
Trigger: TCTGCAGAACAAGCCCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 90 bp CTTCTCTCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTGAGCTaGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LLSPYLQAASVVSLS*FFTFGVAIFSRSPW
Trigger: CCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CAA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGCAGACCTGGAGGCTaGTTTCCACTGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: VATWLMVDVFLASLGVGESRPGG*FPLSFM
Trigger: CATGAAAGACAGTGGAAACAAGCCTCCAGGTCTGCT...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CAA 90 bp TGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACAGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: WLMVDVFLASLGVGERQTASVVS*SWFFTF
Trigger: AAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGC...TGTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp AAAGGGTGTGCAACTTCCCCAAACCGCAGCAACTCCAGCCAGTTTCCCGGTACTCTAGAGGCAGGGACTTaGGGTCAATTACTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: KGCATSPNRSNSSQFPGTLEAGT*GQLLGE
Trigger: TTCCCCCAGTAATTGACCCAAAGTCCCTGCCTCTAG...AGTACCGGGAAACTGGCTGGAGTTGCTGCGGTTTGGGGAAGTTGCACACCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS GCA 90 bp GCCGAGGGAAAGGGAAGGGAGGCGCTAAGTGCAGAGCAGGGGTTATaGGGACACCCTACATTGTTTGGTTTGAAATTGGCAAAACTCTCC +
Preference number: 5 (lower is better)
Translates to: AEGKGREALSAEQGL*GHPTLFGLKLAKLS
Trigger: GGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAGCGCCTCCCTTCCCTTTCCCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CCA 90 bp AGAGTTTGCTTCCTCCGGGCAATCTTAAAGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCACTTCTCTCTCCGTATCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RVCFLRAILKSGIHG*RYRAHPLLSPYLQA
Trigger: AGCCTGCAGATACGGAGAGAGAAGTGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGACTTTAAGATTGCCCGGAGGAAGCAAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CAA 90 bp GTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCCAGAAGTCCCTGGGCTaGTTCTGCAGACATACCAGC +
Preference number: 5 (lower is better)
Translates to: VRHRSKGCHMANGGRLPGQKSLG*FCRHTS
Trigger: GCTGGTATGTCTGCAGAACAAGCCCAGGGACTTCTG...GCCAGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGGTCTTCCTGGCATCCTaGGGGGTAGGGGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVVFLAS*GVGERQ
Trigger: CTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGAC...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTGTCTTCCTGGCATCCTaGGGGGTAGGGGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPVFLAS*GVGERQ
Trigger: CTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGAC...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp TTAAATATCTGGCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCGAAGGGAAAGTGGCATaGCTCCTGAAACTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LNIWPQAQPDSGSLGCSLEGKVA*LLKLLR
Trigger: CCGGAGGAGTTTCAGGAGCAATGCCACTTTCCCTTC...GAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS TCA 90 bp GGGACGCTTTCTCCAGCATCTCTGGATGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACAAACTTCCTTTTTCAAGCATCACAG +
Preference number: 5 (lower is better)
Translates to: GTLSPASLDAPSSRR*GNAWQTNFLFQASQ
Trigger: CTGTGATGCTTGAAAAAGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGAAAGCGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS TCA 90 bp ATCCACTTCTCTCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: IHFSLRICRLPQWSP*AGSSPLALRSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGAGAGAAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CAA 90 bp AGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTAGCAGACCTGGAGGCTaGTTTCCACTGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: RNPSPSALWWSQGLSRWPSRPGG*FPLSFM
Trigger: CATGAAAGACAGTGGAAACAAGCCTCCAGGTCTGCT...AGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CAA 90 bp CACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACATCTTCACCTTTGGCGTaGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HMANGGRLPGILGGRGKTSSPLA*RSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGA...TGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTCTTCACCTTTGGCGTaGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: EKSESQCLMVEPRVKQMASSPLA*RSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGA...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTTCTTCACCTTTGGCGTaGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: SESQCLMVEPRVKQMACFSSPLA*RSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGA...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS GCA 90 bp GATGGTGTCTCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAGGCTTGTTTCCTGCCAGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: DGVSGALSHLPCIVL*GEADLEACFLPGEG
Trigger: ACCTTCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS-3UTR CAA 90 bp GCACTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTGCCATGTATAGTCCTTaGCGGGGAAGCAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: ALVRHRSKGCHMANGGRLAMYSP*RGSRPG
Trigger: TCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGC...AAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CAA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTGCTGGTTCTTCACCTTaGGCGTTGCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGAGSSP*ALRSFP
Trigger: TGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGC...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMASVVS*SWFFTF
Trigger: AAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGC...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp GTTGCCACATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAATTTTATACGAAGAGTTaGCTTCCTCCGGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: VATWLMVDVFLASLGVGEFYTKS*LPPGNL
Trigger: AAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAAA...TTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCATGTGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTTTAGGCAGAGAAGCCTaGGAGTTTTCTCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: SESQCLMVEPRVKQMACFLGREA*EFSQNL
Trigger: CAGATTCTGAGAAAACTCCAAGGCTTCTCTGCCTAA...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS TCA 90 bp GTTATGAGGCTGGGCCGCAACTGCAGGTTGATGTTCCAGATATTCTaGTACCGGCACAGGATCAACTCCATCGTGCCTTTAACCTCCAAA +
Preference number: 5 (lower is better)
Translates to: VMRLGRNCRLMFQIF*YRHRINSIVPLTSK
Trigger: TTTGGAGGTTAAAGGCACGATGGAGTTGATCCTGTGCCGGTATCAGAATATCTGGAACATCAACCTGCAGTTGCGGCCCAGCCTCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436038.5
CDS-3UTR CAA 90 bp CCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTAGCAGACCTGGAGGCTaGTTTCCACTGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: PGPQKIPLSDREIRVPVPSRPGG*FPLSFM
Trigger: CATGAAAGACAGTGGAAACAAGCCTCCAGGTCTGCT...AGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp TCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTGCTTTGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SESQCLMVEPRVKQMACFGALSH*PCIVLC
Trigger: GCAAAGGACTATACATGGCAAATGACTTAAAGCTCC...AAAGCAGGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CAA 90 bp ATGGCTAATGGTGGACGTCTTCCTGGCATCCTTGGGGGTAGGGGAAAGACAGACGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: MANGGRLPGILGGRGKTDGALSH*PCIVLC
Trigger: GCAAAGGACTATACATGGCAAATGACTTAAAGCTCC...GTCTGTCTTTCCCCTACCCCCAAGGATGCCAGGAAGACGTCCACCATTAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CAA 90 bp TTAAATATCTGGCCACAAGCTCAGCCAGACTCTGGTTCCCTCGGCTGTTCACTCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: LNIWPQAQPDSGSLGCSLTDKKS*GKWMGI
Trigger: GATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGT...GAGTGAACAGCCGAGGGAACCAGAGTCTGGCTGAGCTTGTGGCCAGATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS-3UTR CAA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTGCTGGTTCTTCACCTTaGGCGTTGCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVAGSSP*ALRSFP
Trigger: TGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGC...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGGCTGGTTCTTCACCTTaGGCGTTGCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVAGSSP*ALRSFP
Trigger: TGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGC...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: LVRHRSKGCHMANGGRLPASVVS*SWFFTF
Trigger: AAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGC...AGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp GAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGGCCTTTTATACGAAGAGTTaGCTTCCTCCGGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: EKSESQCLMVEPRVKQMAFYTKS*LPPGNL
Trigger: AAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAAA...GGCCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTGATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGCAGAAGTCCCTGGGCTaGTTCTGCAGACATACCAGC +
Preference number: 5 (lower is better)
Translates to: LMALGLFCGKAELGLSERQKSLG*FCRHTS
Trigger: GCTGGTATGTCTGCAGAACAAGCCCAGGGACTTCTG...CCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS-3UTR CAA 90 bp ATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGCAGATGTCTTCACCTTTGGCGTaGCGATCTTTTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: IEKSESQCLMVEPRVKQMSSPLA*RSFPEV
Trigger: GACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGA...CATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTTGTGAGGCATAGAAGTAAAGGTTGCCACATGGCTAATGGTGGACGTCTTCCTGCTGGTTCTTCACCTTaGGCGTTGCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LVRHRSKGCHMANGGRLPAGSSP*ALRSFP
Trigger: TGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGC...AGGAAGACGTCCACCATTAGCCATGTGGCAACCTTTACTTCTATGCCTCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: KIPLSDREIRVPVPYGGAASVVS*SWFFTF
Trigger: AAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGC...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAGCAGACCTGGAGGCTaGTTTCCACTGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: KIPLSDREIRVPVPYGGASRPGG*FPLSFM
Trigger: CATGAAAGACAGTGGAAACAAGCCTCCAGGTCTGCT...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp CCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PLSDREIRVPVPYGGAKGGALSH*PCIVLC
Trigger: GCAAAGGACTATACATGGCAAATGACTTAAAGCTCC...ACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp TATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTAAGACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: YQIEKSESQCLMVEPRVKTDKKS*GKWMGI
Trigger: GATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGT...CTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000479303.1
CDS-3UTR CAA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCTTTCCCGGTACTGCCTaGCCCTGGTTTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFFPGTA*PWFCRC
Trigger: ACACCTGCAAAACCAGGGCAAGGCAGTACCGGGAAA...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS CCA 90 bp TCCCACTCTCTTCACCTTTTTCAAGCATCACAGACAAGAAATCCTTaGGGAAGTGGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTTA +
Preference number: 5 (lower is better)
Translates to: SHSLHLFQASQTRNP*GSGWESGDGVSGAL
Trigger: TAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGTGAAGAGAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS-3UTR CAA 90 bp CTCCCAGGGCCACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LPGPQKIPLSDREIRVPVGALSH*PCIVLC
Trigger: GCAAAGGACTATACATGGCAAATGACTTAAAGCTCC...CACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTGGCCCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp AAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: KIPLSDREIRVPVPYGGATDKKS*GKWMGI
Trigger: GATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGT...GGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp CACAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGCTGGTTCTTCACCTTaGGCGTTGCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: HRKYLYQIEKSESQCLMVAGSSP*ALRSFP
Trigger: TGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGC...CACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000479303.1
CDS-3UTR CAA 90 bp CTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAGCCAAGGGTTTTTTATACGAAGAGTTaGCTTCCTCCGGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: LYQIEKSESQCLMVEPRVFYTKS*LPPGNL
Trigger: AAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAAA...AACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000479303.1
CDS CCA 90 bp TGGCAGACAAACTTCCTTTTTCAAGCATCACAGACAAGAAATCCTTaGGGAAGTGGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTTA +
Preference number: 5 (lower is better)
Translates to: WQTNFLFQASQTRNP*GSGWESGDGVSGAL
Trigger: TAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGAAGTTTGTCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS CCA 90 bp CACCTTTTTCAAGCATCACAGACAAGAAATCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTTGCCA +
Preference number: 5 (lower is better)
Translates to: HLFQASQTRNPWGSG*ESGDGVSGALSHLP
Trigger: TGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473649.1
ENST00000489654.1
ENST00000494735.1
CDS CCA 90 bp GGCGCTAAGTGCAGAGCAGGGGTTATGCGGACACCCTACATTGTTTaGTTTGAAATTGGCAAAACTCTCCTCACTACTAGAAATCTATTC +
Preference number: 5 (lower is better)
Translates to: GAKCRAGVMRTPYIV*FEIGKTLLTTRNLF
Trigger: GAATAGATTTCTAGTAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAGCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS-3UTR CAA 90 bp CAGAAAATACCTCTATCAGATAGAGAAATCCGAGTCCCAGTGCCTTATGGTGGAACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATC +
Preference number: 5 (lower is better)
Translates to: QKIPLSDREIRVPVPYGGTDKKS*GKWMGI
Trigger: GATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGT...TCCACCATAAGGCACTGGGACTCGGATTTCTCTATCTGATAGAGGTATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000479303.1
CDS-3UTR CAA 90 bp TGGTTCCCAACAATGGATCCAAGTGAGGTTTCAGCTTCCAAATACAGAGTATTCTGTAAGGCTCCGTACTaGGTTCCCAACAATGGATCC +
Preference number: 5 (lower is better)
Translates to: WFPTMDPSEVSASKYRVFCKAPY*VPNNGS
Trigger: GGATCCATTGTTGGGAACCAAGTACGGAGCCTTACA...GAATACTCTGTATTTGGAAGCTGAAACCTCACTTGGATCCATTGTTGGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS CCA 90 bp ATCACAGACAAGAAATCCTTGGGGAAGTGGATGGGAATCTGGAGATaGTGTCTCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: ITDKKSLGKWMGIWR*CLRSFKSFAMYSPL
Trigger: CAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS CCA 90 bp TTCCTTTTTCAAGCATCACAGACAAGAAATCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTTGCCA +
Preference number: 5 (lower is better)
Translates to: FLFQASQTRNPWGSG*ESGDGVSGALSHLP
Trigger: TGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS CCA 90 bp CTCCATCCTATCAATCCCTCAATCTCCGACTTCTGTGTTTTTCACTaGATACCCTGTCTACATCCCACTCTCTTCACCTTTTTCAAGCAT +
Preference number: 5 (lower is better)
Translates to: LHPINPSISDFCVFH*IPCLHPTLFTFFKH
Trigger: ATGCTTGAAAAAGGTGAAGAGAGTGGGATGTAGACAGGGTATCCAGTGAAAAACACAGAAGTCGGAGATTGAGGGATTGATAGGATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS CCA 90 bp TCTTCACCTTTTTCAAGCATCACAGACAAGAAATCCTTGGGGAAGTaGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: SSPFSSITDKKSLGK*MGIWRWCLRSFKSF
Trigger: AAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS-3UTR CAA 90 bp CTGATGGCATTAGGTTTATTTTGTGGGAAAGCAGAATTGGGGCTCTCTGAAAGGTTTTATACGAAGAGTTaGCTTCCTCCGGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: LMALGLFCGKAELGLSERFYTKS*LPPGNL
Trigger: AAGATTGCCCGGAGGAAGCAAACTCTTCGTATAAAA...CCTTTCAGAGAGCCCCAATTCTGCTTTCCCACAAAATAAACCTAATGCCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358406.10
ENST00000479303.1
CDS CCA 90 bp AAACTTCCTTTTTCAAGCATCACAGACAAGAAATCCTTGGGGAAGTaGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: KLPFSSITDKKSLGK*MGIWRWCLRSFKSF
Trigger: AAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS CCA 72 bp TCAGCCCCGGAGCTCTCCCTGCTTGCCTTAACCCCTTaGGCGGCGCCAGGAGTTACACGAGACCTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: SAPELSLLALTP*AAPGVTRDLCP
Trigger: GGGACAGAGGTCTCGTGTAACTCCTGGCGCCGCCCAAGGGGTTAAGGCAAGCAGGGAGAGCTCCGGGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 72 bp TTCAGCCCCGGAGCTCTCCCTGCTTGCCTTAACCCCTaGGGCGGCGCCAGGAGTTACACGAGACCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FSPGALPACLNP*GGARSYTRPLS
Trigger: GGACAGAGGTCTCGTGTAACTCCTGGCGCCGCCCAAGGGGTTAAGGCAAGCAGGGAGAGCTCCGGGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp AAAGTGACCTTCAGCCCCGGAGCTCTCCCTGCTTGCCTTAACCCCTaGGGCGGCGCCAGGAGTTACACGAGACCTCTGTCCCGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: KVTFSPGALPACLNP*GGARSYTRPLSRSP
Trigger: AGGGCTCCGGGACAGAGGTCTCGTGTAACTCCTGGCGCCGCCCAAGGGGTTAAGGCAAGCAGGGAGAGCTCCGGGGCTGAAGGTCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp CATCCAAGGTCCTCCCAGAGGATTCCCAGAGCCCCACACTCACCCTaGACCAGACGCGCATCCACAGCTCCCGGGACGCTTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: HPRSSQRIPRAPHSP*TRRASTAPGTLSPA
Trigger: TGCTGGAGAAAGCGTCCCGGGAGCTGTGGATGCGCGTCTGGTCAAGGGTGAGTGTGGGGCTCTGGGAATCCTCTGGGAGGACCTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479303.1
CDS GCA 72 bp CACAAAGTGACCTTCAGCCCCGGAGCTCTCCCTGCTTaGCTTAACCCCTTGGGCGGCGCCAGGAGTTACACG +
Preference number: 6 (lower is better)
Translates to: HKVTFSPGALPA*LNPLGGARSYT
Trigger: CGTGTAACTCCTGGCGCCGCCCAAGGGGTTAAGGCAAGCAGGGAGAGCTCCGGGGCTGAAGGTCACTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS GCA 72 bp CACAGCTCCCGGGACGCTTTCTCCAGCATCTCTGGATaGTCCAAGTTCACGGCGGTGAGGAAACGCATGGCA +
Preference number: 6 (lower is better)
Translates to: HSSRDAFSSISG*SKFTAVRKRMA
Trigger: TGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGAAAGCGTCCCGGGAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS GCA 72 bp TTTGGAGCCGCCCCTCTTTCCACCACCGTGGGAAACTaGAGTCGGGATATAAAGGCTCGGGTTGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: FGAAPLSTTVGN*SRDIKARVGAS
Trigger: GCTGGCTCCAACCCGAGCCTTTATATCCCGACTGCAGTTTCCCACGGTGGTGGAAAGAGGGGCGGCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CCA 72 bp GCCAGCAGCTCCATCCGGTCAGAGCCAAATAACATGTaGGTTTGGCCATCCACATGGGCCACGGTGATGGGC +
Preference number: 6 (lower is better)
Translates to: ASSSIRSEPNNM*VWPSTWATVMG
Trigger: GCCCATCACCGTGGCCCATGTGGATGGCCAAACCCACATGTTATTTGGCTCTGACCGGATGGAGCTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 72 bp AGCTTTCTGGCTGCCAGTGCCAATATAAGGACCCGCTaGGGTCGGCTCTCTTGGGCCACTGAGATCACCCCT +
Preference number: 6 (lower is better)
Translates to: SFLAASANIRTR*GRLSWATEITP
Trigger: AGGGGTGATCTCAGTGGCCCAAGAGAGCCGACCCCAGCGGGTCCTTATATTGGCACTGGCAGCCAGAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS CAA 90 bp CGTTGGGCTAAGAGGTGGCCGTGTTCTGCATTTCTCCCTGAATGTTaGGAGCCGCCCCTCTTTCCACCACCGTGGGAAACTGCAGTCGGG +
Preference number: 6 (lower is better)
Translates to: RWAKRWPCSAFLPEC*EPPLFPPPWETAVG
Trigger: CCCGACTGCAGTTTCCCACGGTGGTGGAAAGAGGGGCGGCTCCAAACATTCAGGGAGAAATGCAGAACACGGCCACCTCTTAGCCCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS TCA 72 bp ATAACATGTGGGTTTGGCCATCCACATGGGCCACGGTaGTGGGCAGCCCAAAGGCTCCGTATCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ITCGFGHPHGPR*WAAQRLRICRL
Trigger: CAGCCTGCAGATACGGAGCCTTTGGGCTGCCCATCACCGTGGCCCATGTGGATGGCCAAACCCACATGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS GCA 72 bp GGTGATGGGCAGCCCAAAGGCTCCGTATCTGCAGGCTaGCTCAGTGGTCTCCTTGAGCTGGTTCTTCACCTT +
Preference number: 6 (lower is better)
Translates to: GDGQPKGSVSAG*LSGLLELVLHL
Trigger: AAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTGGGCTGCCCATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 72 bp AGCTCCATCCGGTCAGAGCCAAATAACATGTGGGTTTaGCCATCCACATGGGCCACGGTGATGGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: SSIRSEPNNMWV*PSTWATVMGSP
Trigger: TGGGCTGCCCATCACCGTGGCCCATGTGGATGGCCAAACCCACATGTTATTTGGCTCTGACCGGATGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CAA 90 bp TTGCGGGGAAGCAGACCTGGAGGCTTGTTTCCTGCCAGGAGAAGGTaGGGCACGCTAAGTGAGAAAAGACCTAAGGGTCCCAGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: LRGSRPGGLFPARRR*GTLSEKRPKGPRFG
Trigger: CCCAAACCTGGGACCCTTAGGTCTTTTCTCACTTAGCGTGCCCAACCTTCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS TCA 72 bp CTGGGCCGCAACTGCAGGTTGATGTTCCAGATATTCTaGTACCGGCACAGGATCTCGAAGCCCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LGRNCRLMFQIF*YRHRISKPSQE
Trigger: CTCCTGGCTGGGCTTCGAGATCCTGTGCCGGTATCAGAATATCTGGAACATCAACCTGCAGTTGCGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
CDS TCA 72 bp TCTCCAGCATCTCTGGATGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACAAACTTCCTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SPASLDAPSSRR*GNAWQTNFLWG
Trigger: GCCCCACAGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 72 bp AGAGGTGGCCGTGTTCTGCATTTCTCCCTGAATGTTTaGAGCCGCCCCTCTTTCCACCACCGTGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: RGGRVLHFSLNV*SRPSFHHRGKL
Trigger: CAGTTTCCCACGGTGGTGGAAAGAGGGGCGGCTCCAAACATTCAGGGAGAAATGCAGAACACGGCCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp GGCAGCCCAAAGGCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: GSPKAPYLQAASVVS*SWFFTFGVAIFSRS
Trigger: ACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGCCTTTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS TCA 72 bp CTGGGCCGCAACTGCAGGTTGATGTTCCAGATATTCTaGTACCGGCACAGGATCTGCGGGCAGAGGTCAAGA +
Preference number: 6 (lower is better)
Translates to: LGRNCRLMFQIF*YRHRICGQRSR
Trigger: TCTTGACCTCTGCCCGCAGATCCTGTGCCGGTATCAGAATATCTGGAACATCAACCTGCAGTTGCGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS GCA 72 bp CAGCCTCTCACCCAAGGTTCCCATGACCTATTTGCCTaGTCTTCTTCCCTTTCATGCCCGGCAACCTTCAGC +
Preference number: 6 (lower is better)
Translates to: QPLTQGSHDLFA*SSSLSCPATFS
Trigger: GCTGAAGGTTGCCGGGCATGAAAGGGAAGAAGAGCAGGCAAATAGGTCATGGGAACCTTGGGTGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 72 bp TTCCTCCGGGCAATCTTAAAGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCACTTCTCTCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: FLRAILKSGIHG*RYRAHPLLSQQ
Trigger: CTGCTGGGAGAGAAGTGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGACTTTAAGATTGCCCGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CAA 72 bp AAGAGGTGGCCGTGTTCTGCATTTCTCCCTGAATGTTaGGAGCCGCCCCTCTTTCCACCACCGTGGGAAACT +
Preference number: 6 (lower is better)
Translates to: KRWPCSAFLPEC*EPPLFPPPWET
Trigger: AGTTTCCCACGGTGGTGGAAAGAGGGGCGGCTCCAAACATTCAGGGAGAAATGCAGAACACGGCCACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS TCA 72 bp AGGCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTT +
Preference number: 6 (lower is better)
Translates to: RLRICRLPQWSP*AGSSPLALRSF
Trigger: AAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS TCA 72 bp GGAGCCAGCGACTCTATTCCGTTTAAAAGCACAAAGTaGCCTTCAGCCCCGGAGCTCTCCCTGCTTGCCTTA +
Preference number: 6 (lower is better)
Translates to: GASDSIPFKSTK*PSAPELSLLAL
Trigger: TAAGGCAAGCAGGGAGAGCTCCGGGGCTGAAGGTCACTTTGTGCTTTTAAACGGAATAGAGTCGCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS GCA 72 bp AGGCTGATCCTGAGGTTTCCCAAGGCAGGCTTCACTTaGTTTAGTCTCCCGCAGCCCCTCCATCCTATCAAT +
Preference number: 6 (lower is better)
Translates to: RLILRFPKAGFT*FSLPQPLHPIN
Trigger: ATTGATAGGATGGAGGGGCTGCGGGAGACTAAAGCAAGTGAAGCCTGCCTTGGGAAACCTCAGGATCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS GCA 72 bp TCCCATGACCTATTTGCCTGCTCTTCTTCCCTTTCATaGCCGGCAACCTTCAGCTCGCTCAAGGCTGATCCT +
Preference number: 6 (lower is better)
Translates to: SHDLFACSSSLS*PATFSSLKADP
Trigger: AGGATCAGCCTTGAGCGAGCTGAAGGTTGCCGGGCATGAAAGGGAAGAAGAGCAGGCAAATAGGTCATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473649.1
CDS CCA 72 bp TGCCTCAGTGGTCTCCTTGAGCTGGTTCTTCACCTTTaGCGTTGCGATCTTTTCCAGAAGTCCCTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: CLSGLLELVLHL*RCDLFQKSLGL
Trigger: CAAGCCCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CAA 72 bp ATGTATAGTCCTTTGCGGGGAAGCAGACCTGGAGGCTaGTTTCCTGCCAGGAGAAGGTTGGGCACGCTAAGT +
Preference number: 6 (lower is better)
Translates to: MYSPLRGSRPGG*FPARRRLGTLS
Trigger: ACTTAGCGTGCCCAACCTTCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS TCA 72 bp TCTCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTTaGGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTT +
Preference number: 6 (lower is better)
Translates to: SLRICRLPQWSP*AGSSPLALRSF
Trigger: AAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS TCA 72 bp TCTCCAGCATCTCTGGATGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACAAACTTCCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: SPASLDAPSSRR*GNAWQTNFHCL
Trigger: AAGACAGTGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443571.6
CDS GCA 72 bp AGTGGTCTCCTTGAGCTGGTTCTTCACCTTTGGCGTTaGGATCTTTTCCAGAAGTCCCTGGGCTTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SGLLELVLHLWR*DLFQKSLGLFC
Trigger: GCAGAACAAGCCCAGGGACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000442394.5
ENST00000443571.6
ENST00000473649.1
ENST00000479303.1
CDS CCA 72 bp TTCCTCCGGGCAATCTTAAAGTCTGGCATTCACGGCTaGAGGTATAGGGCCCATCCACTTCTCTCTCCGTAT +
Preference number: 6 (lower is better)
Translates to: FLRAILKSGIHG*RYRAHPLLSPY
Trigger: ATACGGAGAGAGAAGTGGATGGGCCCTATACCTCCAGCCGTGAATGCCAGACTTTAAGATTGCCCGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS CAA 90 bp CATCCACTTCTCTCTCCGTATCTGCAGGCTGCCTCAGTGGTCTCCTaGAGCTGGTTCTTCACCTTTGGCGTTGCGATCTTTTCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: HPLLSPYLQAASVVS*SWFFTFGVAIFSRS
Trigger: ACTTCTGGAAAAGATCGCAACGCCAAAGGTGAAGAACCAGCTCAAGGAGACCACTGAGGCAGCCTGCAGATACGGAGAGAGAAGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442394.5
CDS CAA 90 bp TCATTTGCCATGTATAGTCCTTTGCGGGGAAGCAGACCTGGAGGCTaGTTTCCTGCCAGGAGAAGGTTGGGCACGCTAAGTGAGAAAAGA +
Preference number: 6 (lower is better)
Translates to: SFAMYSPLRGSRPGG*FPARRRLGTLSEKR
Trigger: TCTTTTCTCACTTAGCGTGCCCAACCTTCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS CAA 90 bp AGATGGTGTCTCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTaGCGGGGAAGCAGACCTGGAGGCTTGTTTCCTGCCAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RWCLRSFKSFAMYSP*RGSRPGGLFPARRR
Trigger: CCTTCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489654.1
CDS TCA 72 bp CTGGGCCGCAACTGCAGGTTGATGTTCCAGATATTCTaGTACCGGCACAGGATCAACTCCATCGTGCCTTTA +
Preference number: 6 (lower is better)
Translates to: LGRNCRLMFQIF*YRHRINSIVPL
Trigger: TAAAGGCACGATGGAGTTGATCCTGTGCCGGTATCAGAATATCTGGAACATCAACCTGCAGTTGCGGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436038.5
CDS GCA 72 bp AAGGGAAGGGAGGCGCTAAGTGCAGAGCAGGGGTTATaGGGACACCCTACATTGTTTGGTTTGAAATTGGCA +
Preference number: 6 (lower is better)
Translates to: KGREALSAEQGL*GHPTLFGLKLA
Trigger: TGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAGCGCCTCCCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp AGTGGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGCGGGGAAGCAGACCTGGAGGCTTGT +
Preference number: 6 (lower is better)
Translates to: SGWESGDGVSGALSH*PCIVLCGEADLEAC
Trigger: ACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS TCA 72 bp TCTCCAGCATCTCTGGATGCTCCAAGTTCACGGCGGTaGGGAAACGCATGGCAGACAAACTTCCTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: SPASLDAPSSRR*GNAWQTNFLFQ
Trigger: TTGAAAAAGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS TCA 72 bp CGTGCCTTTAACCTCCAAACTGCCCTTGGTCATTCCTaGGCATGGGACGAGCTGATCTTGGTTTCAAAACTG +
Preference number: 6 (lower is better)
Translates to: RAFNLQTALGHS*AWDELILVSKL
Trigger: CAGTTTTGAAACCAAGATCAGCTCGTCCCATGCTCAGGAATGACCAAGGGCAGTTTGGAGGTTAAAGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436038.5
CDS CAA 72 bp CTCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTaGCGGGGAAGCAGACCTGGAGGCTTGTTTCCACTG +
Preference number: 6 (lower is better)
Translates to: LRSFKSFAMYSP*RGSRPGGLFPL
Trigger: CAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000494735.1
CDS GCA 72 bp TCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTTaGGGGGAAGCAGACCTGGAGGCTTGTTTCCACTGT +
Preference number: 6 (lower is better)
Translates to: SGALSHLPCIVL*GEADLEACFHC
Trigger: ACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000494735.1
CDS CAA 72 bp GAATCTGGAGATGGTGTCTCAGGAGCTTTAAGTCATTaGCCATGTATAGTCCTTTGCGGGGAAGCAGACCTG +
Preference number: 6 (lower is better)
Translates to: ESGDGVSGALSH*PCIVLCGEADL
Trigger: CAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS CAA 90 bp AGATGGTGTCTCAGGAGCTTTAAGTCATTTGCCATGTATAGTCCTTaGCGGGGAAGCAGACCTGGAGGCTTGTTTCCACTGTCTTTCATG +
Preference number: 6 (lower is better)
Translates to: RWCLRSFKSFAMYSP*RGSRPGGLFPLSFM
Trigger: CATGAAAGACAGTGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000494735.1
CDS CAA 90 bp AGGGAGGCGCTAAGTGCAGAGCAGGGGTTATGCGGACACCCTACATaGTTTGGTTTGAAATTGGCAAAACTCTCCTCACTACTAGAAATC +
Preference number: 6 (lower is better)
Translates to: REALSAEQGLCGHPT*FGLKLAKLSSLLEI
Trigger: GATTTCTAGTAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAGCGCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp ATCCCACTCTCTTCACCTTTTTCAAGCATCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: IPLSSPFSSITDKKS*GKWMGIWRWCLRSF
Trigger: AAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGTGAAGAGAGTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS CCA 72 bp CAAGCATCACAGACAAGAAATCCTTGGGGAAGTGGATaGGAATCTGGAGATGGTGTCTCAGGAGCTTTAAGT +
Preference number: 6 (lower is better)
Translates to: QASQTRNPWGSG*ESGDGVSGALS
Trigger: ACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS CAA 90 bp ATGGCAGACAAACTTCCTTTTTCAAGCATCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: MADKLPFSSITDKKS*GKWMGIWRWCLRSF
Trigger: AAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGAAGTTTGTCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS CCA 72 bp TTTTCAAGCATCACAGACAAGAAATCCTTGGGGAAGTaGATGGGAATCTGGAGATGGTGTCTCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: FSSITDKKSLGK*MGIWRWCLRSF
Trigger: AAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS CAA 72 bp TCTTCACCTTTTTCAAGCATCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATCTGGAGATGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: SSPFSSITDKKS*GKWMGIWRWCL
Trigger: GAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473649.1
ENST00000489654.1
CDS CAA 72 bp CTAAGTGCAGAGCAGGGGTTATGCGGACACCCTACATaGTTTGGTTTGAAATTGGCAAAACTCTCCTCACTA +
Preference number: 6 (lower is better)
Translates to: LSAEQGLCGHPT*FGLKLAKLSSL
Trigger: TAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp GCAGAGCAGGGGTTATGCGGACACCCTACATTGTTTGGTTTGAAATaGGCAAAACTCTCCTCACTACTAGAAATCTATTCCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: AEQGLCGHPTLFGLK*AKLSSLLEIYSRIF
Trigger: GAAGATCCTGGAATAGATTTCTAGTAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CAA 90 bp CTAAGTGCAGAGCAGGGGTTATGCGGACACCCTACATTGTTTGGTTaGAAATTGGCAAAACTCTCCTCACTACTAGAAATCTATTCCAGG +
Preference number: 6 (lower is better)
Translates to: LSAEQGLCGHPTLFG*KLAKLSSLLEIYSR
Trigger: CCTGGAATAGATTTCTAGTAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCCCTGCTCTGCACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494735.1
CDS CCA 72 bp AAGAAATCCTTGGGGAAGTGGATGGGAATCTGGAGATaGTGTCTCAGGAGCTTTAAGTCATTTGCCATGTAT +
Preference number: 6 (lower is better)
Translates to: KKSLGKWMGIWR*CLRSFKSFAMY
Trigger: ATACATGGCAAATGACTTAAAGCTCCTGAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000473649.1
ENST00000479303.1
ENST00000489654.1
ENST00000494735.1
CDS CAA 72 bp AAACTTCCTTTTTCAAGCATCACAGACAAGAAATCCTaGGGGAAGTGGATGGGAATCTGGAGATGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: KLPFSSITDKKS*GKWMGIWRWCL
Trigger: GAGACACCATCTCCAGATTCCCATCCACTTCCCCAAGGATTTCTTGTCTGTGATGCTTGAAAAAGGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358406.10
ENST00000409500.7
ENST00000436038.5
ENST00000442394.5
ENST00000479303.1
CDS CAA 72 bp GGGTTATGCGGACACCCTACATTGTTTGGTTTGAAATaGGCAAAACTCTCCTCACTACTAGAAATCTATTCC +
Preference number: 6 (lower is better)
Translates to: GLCGHPTLFGLK*AKLSSLLEIYS
Trigger: GGAATAGATTTCTAGTAGTGAGGAGAGTTTTGCCAATTTCAAACCAAACAATGTAGGGTGTCCGCATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494735.1