RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSTCD (Homo sapiens)

Ensembl gene IDs: ENSG00000138780

Ensembl transcript IDs: ENST00000360505.9, ENST00000394728.4, ENST00000394730.7, ENST00000484843.1, ENST00000503409.1, ENST00000507281.5, ENST00000509336.5, ENST00000510865.5, ENST00000512828.1, ENST00000515255.5, ENST00000515279.6

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCTGAATGCC +
Preference number: 1 (lower is better)
Translates to: KISLLLSFLSTIGSR*LMLFPSYAKNLLNA
Trigger: GGCATTCAGGAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR TCA 90 bp TTTGAATTAAACATCACATTGGCAAGATCAGAGGAGCTTGTGAAGTaGGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATT +
Preference number: 1 (lower is better)
Translates to: FELNITLARSEELVK*EGNCYSCDGTSTSI
Trigger: AATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTCACTTCACAAGCTCCTCTGATCTTGCCAATGTGATGTTTAATTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR GCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCCAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 2 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR GCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTAGCTGAGGCAGGAGAATaGAGAGGTTGTGGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: TIPICLPPPPILPCKIFLAEAGE*RGCGEP
Trigger: TGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGC...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 2 (lower is better)
Translates to: CDALQGAFTSKISLLLSFPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGGCGGCTGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNGGWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCAGCCGCC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR GCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 2 (lower is better)
Translates to: CDALQGAFTSKISLLLSFQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 2 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTTGAACCCGGGAGGCTaGGGTTCCAGTGAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGLNPGG*GSSEPR
Trigger: TCTCGGCTCACTGGAACCCCAGCCTCCCGGGTTCAA...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATGCCAAGAACCTCCTaGATGCCACTGGGCATCCAA +
Preference number: 2 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTMPRTS*MPLGIQ
Trigger: TTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCAT...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR TCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 2 (lower is better)
Translates to: GTSTSIILLAAETSGDSHTGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTATAATCCTGGCACTTTaGGAGGCTGAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGIILAL*EAEAAG
Trigger: TCCAGCCGCCTCAGCCTCCCAAAGTGCCAGGATTAT...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR TCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTAAGTGCTTTCTCCTCATaGTACATGTTACACAGGGGT +
Preference number: 2 (lower is better)
Translates to: TIPICLPPPPILPCKIFLSAFSS*YMLHRG
Trigger: ACCCCTGTGTAACATGTATCATGAGGAGAAAGCACT...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
3UTR CAA 90 bp ATTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTaGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTG +
Preference number: 2 (lower is better)
Translates to: ICDALQGAFTSKISL*LSFLSTIGSRWLML
Trigger: CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR GCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGCATTTGTGATGCTTTaGAGGGAGCCTTTACTTCCA +
Preference number: 2 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTAFVML*REPLLP
Trigger: TGGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCGCTGTAGTCCTTATGTaGAAGAAAACAGGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPAVVLM*KKTGRV
Trigger: GACTCTGCCTGTTTTCTTTCACATAAGGACTACAGC...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCATTTAAAAGCATATTaGGTCCGAGTGGTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPHLKAY*VRVVAE
Trigger: TTCAGCCACCACTCGGACTCAATATGCTTTTAAATG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATCAAACCACTGGTCTCTaGCACTCATACTCTAGAATG +
Preference number: 2 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNQTTGL*HSYSRM
Trigger: CATTCTAGAGTATGAGTGTCAGAGACCAGTGGTTTG...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: CDALQGAFTSKISLLLSFTIGSR*LMLFPS
Trigger: ACTAGGAAACAGCATTAGCCATCTTGAACCTATTGT...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR CAA 90 bp GGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTaGGCAGCTGAGACTTCAGGGGATTCTCACTATAAAAACCAGCAG +
Preference number: 2 (lower is better)
Translates to: GNCYSCDGTSTSIIL*AAETSGDSHYKNQQ
Trigger: CTGCTGGTTTTTATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR TCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 2 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWTGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR GCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCAGTCAAATAAAGGTGTaGAGAATCAAGGAGCCAAAC +
Preference number: 2 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPSQIKV*RIKEPN
Trigger: GTTTGGCTCCTTGATTCTGCACACCTTTATTTGACT...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTCAACGTGAAGACGGATaGCAAAATATCAAATGTGAA +
Preference number: 2 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTQREDG*QNIKCE
Trigger: TTCACATTTGATATTTTGCCATCCGTCTTCACGTTG...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPTIGSR*LMLFPS
Trigger: ACTAGGAAACAGCATTAGCCATCTTGAACCTATTGT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATAAAATTAGCCAGATATaGTGGCGGGCTCCTATAATC +
Preference number: 2 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNKISQI*WRAPII
Trigger: GATTATAGGAGCCCGCCACCATATCTGGCTAATTTT...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCGTAAATTTAGTAAACTaGGTCACAGCCTTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPVNLVN*VTAFSR
Trigger: TCTTGAGAAGGCTGTGACTCAGTTTACTAAATTTAC...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR CCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATCAACGTGAAGACGGATaGCAAAATATCAAATGTGAA +
Preference number: 2 (lower is better)
Translates to: TSTSIILLAAETSGDSHYQREDG*QNIKCE
Trigger: TTCACATTTGATATTTTGCCATCCGTCTTCACGTTG...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGCCTGGCCAATATGGTaGAACTTCATATTTACTAAA +
Preference number: 2 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNAWPIW*NFIFTK
Trigger: TTTAGTAAATATGAAGTTTCACCATATTGGCCAGGC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
3UTR-3UTR CCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAACGTGAAGACGGATaGCAAAATATCAAATGTGAA +
Preference number: 2 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWQREDG*QNIKCE
Trigger: TTCACATTTGATATTTTGCCATCCGTCTTCACGTTG...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR GCA 72 bp TATTTTGAGTCTGGGTCTCATTTTCCCAGGCAGGAGTaGAGTGGCGCTATCAAGGCTCACTGCAGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: YFESGSHFPRQE*SGAIKAHCSLD
Trigger: GTCAAGGCTGCAGTGAGCCTTGATAGCGCCACTGCACTCCTGCCTGGGAAAATGAGACCCAGACTCAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
3UTR-3UTR CAA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATAGCATTTGTGATGCTTaGCAGGGAGCCTTTACTTCC +
Preference number: 3 (lower is better)
Translates to: TSTSIILLAAETSGDSHYSICDA*QGAFTS
Trigger: GGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGCT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR CCA 72 bp CTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTC +
Preference number: 3 (lower is better)
Translates to: LLLSFLSTIGSR*LMLFPSYAKNL
Trigger: GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR TCA 72 bp AACATCACATTGGCAAGATCAGAGGAGCTTGTGAAGTaGGAAGGAAATTGTTATTCCTGTGATGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: NITLARSEELVK*EGNCYSCDGTS
Trigger: GGAGGTTCCATCACAGGAATAACAATTTCCTTCTCACTTCACAAGCTCCTCTGATCTTGCCAATGTGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
3UTR CCA 72 bp ATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTaGCAGCTGAGACTTCAGGGGATTCTCACTATAAAA +
Preference number: 3 (lower is better)
Translates to: IPVMEPPLVLFF*QLRLQGILTIK
Trigger: TTTTATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACC +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAARQGG*VSVSAT
Trigger: GGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGC...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEGREGA*ACRRPG
Trigger: CCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCC...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCATGCAGAGGTTGTGGTaGGCCAAGATCGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAMQRLW*AKIEPL
Trigger: CAGTGGCTCGATCTTGGCTCACCACAACCTCTGCAT...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGGCGGCTGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFGGWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCAGCCGCC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTTGAACCCGGGAGGCTaGGGTTCCAGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFLNPGG*GSSEPR
Trigger: TCTCGGCTCACTGGAACCCCAGCCTCCCGGGTTCAA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSGREGA*ACRRPG
Trigger: CCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCC...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTAAGCGTGTCGGCGACCTaGGCCGCCTGCGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLSVSAT*AACAFP
Trigger: CGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCT...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCCATAGCCTGGTCCACTaGCTAACCTCTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAHSLVH*LTSLVT
Trigger: TGTCACCAAAGAGGTTAGTCAGTGGACCAGGCTATG...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394730.7
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFPSAFC*LSFCLR
Trigger: CCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFHMLQR*KVGGFC
Trigger: GCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAGAGCCTTCGTTGGGGTaGGAGCTGGACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKEPSLG*ELDSCL
Trigger: CAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTC...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGACAGCCACCTTATGTaGAAAATACTCGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFDSHLM*KILAPA
Trigger: GGCCGGCGCGAGTATTTTCCACATAAGGTGGCTGTC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCATCTTCCTTTGGGCTaGCTGCTGCAGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFHLPLG*LLQGEH
Trigger: ATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGATG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCTTCCAGACTCTTGGATaGAGAATCCAACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAFQTLG*RIQPFR
Trigger: TCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAA...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCCTGTACTGTGAGCTTTaGGAATGCCACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRALYCEL*ECHFQF
Trigger: GAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAG...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNGREGA*ACRRPG
Trigger: CCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKPSAFC*LSFCLR
Trigger: CCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGTGGACCTTGCTCTTTaGCTTTCCCTTAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFVDLAL*LSLSKG
Trigger: CCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCAC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGCCTCTGGGAGCTGCTaGCCGCAGACCACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLASGSC*PQTTRL
Trigger: GAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGCTGCCTCTGGGAGCTaGTGCCCGCAGACCACTCGC +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLAASGS*CPQTTR
Trigger: GCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACC +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLARQGG*VSVSAT
Trigger: GGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGC...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACC +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPARQGG*VSVSAT
Trigger: GGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGC...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAGAGCCTTCGTTGGGGTaGGAGCTGGACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIEPSLG*ELDSCL
Trigger: CAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTC...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATTTCCAAGGCTGCCTCTaGGAGCTGCTGCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNFQGCL*ELLPAD
Trigger: GTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAA...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATAGCGTGTCGGCGACCTaGGCCGCCTGCGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNSVSAT*AACAFP
Trigger: CGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCT...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATGCCAAGAACCTCCTaGATGCCACTGGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKMPRTS*MPLGIQ
Trigger: TTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCAT...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCCCACACTTAGAAGCTaGTGTTTTTACTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFPTLRS*CFYSWH
Trigger: GTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGGCCTCTGGGAGCTGCTaGCCGCAGACCACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMASGSC*PQTTRL
Trigger: GAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGC...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCTGGAATTCCAAGGCTaGCTCTGGGAGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPELEFQG*LWELLP
Trigger: GGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPERWGGS*TAVWSA
Trigger: TGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNRWGGS*TAVWSA
Trigger: TGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTTCCAAGGCTGCCTCTaGGAGCTGCTGCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFFQGCL*ELLPAD
Trigger: GTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCTCTACAAAAATTGTCTaGTCGTTCTACTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRASTKIV*SFYYCR
Trigger: CCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGA...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515279.6
CDS-3UTR GCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATACCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIPSAFC*LSFCLR
Trigger: CCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCAAGGTCGGAGGCTTTTaGTTTTCTGATGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFKVGGF*FSDVRR
Trigger: CCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTGCCTCTGGGAGCTGCTaGCCGCAGACCACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGASGSC*PQTTRL
Trigger: GAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGC...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTGCTGCCTCTGGGAGCTaGTGCCCGCAGACCACTCGC +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGAASGS*CPQTTR
Trigger: GCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGC...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTTCTACAGGTATAGTTaGGGGCTGGTCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFFYRYS*GLVRRF
Trigger: GAATCTTCTGACCAGCCCCCAACTATACCTGTAGAA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTTTCATTGGGTCACCTaGTCGCAGAGGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSFHWVT*SQRRGQ
Trigger: CTGGCCGCGCCTCTGCGACCAGGTGACCCAATGAAA...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACATCCTTCTGTTTGGTaGGAAAAGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKHPSVW*EKSRYR
Trigger: CCTGTACCTGGACTTTTCTCACCAAACAGAAGGATG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCACATAGCCTGGTCCACTaGCTAACTTCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISHSLVH*LTSAQA
Trigger: AGCCTGTGCTGAAGTTAGTCAGTGGACCAGGCTATG...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATACCTTCCTTTGGGCTaGCTGCTGCAGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIYLPLG*LLQGEH
Trigger: ATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACATGATGGCAGCATGTaGGCAAGGACAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKHDGSM*ARTIPT
Trigger: TGTTGGAATTGTCCTTGCTCACATGCTGCCATCATG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAAGGAAGCCCGTGTTTTaGTACAGTGCTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKRKPVF*YSAQSP
Trigger: TGGTGATTGAGCACTGTATCAAAACACGGGCTTCCT...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATGCACTGTTTTCCTATaGGCCTTCGTTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKICTVFL*AFVGVG
Trigger: TCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAATGCCAAGAACCTCCTaGATGCCACTGGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIMPRTS*MPLGIQ
Trigger: TTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCAT...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCATTTAAAAGCATATTaGGTCCGAGTGGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFHLKAY*VRVVAE
Trigger: TTCAGCCACCACTCGGACTCAATATGCTTTTAAATG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNPSAFC*LSFCLR
Trigger: CCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEPSAFC*LSFCLR
Trigger: CCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCACAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCTGGAATTCCAAGGCTaGCTCTGGGAGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPLEFQG*LWELLP
Trigger: GGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTCAGTTCCAGACTCTTaGATGAAGAATCCAACCCTT +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFSVPDS*MKNPTL
Trigger: AAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNRWGGS*TAVWSA
Trigger: TGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGAGCCTTCGTTGGGGTaGGAGCTGGACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTEPSLG*ELDSCL
Trigger: CAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRATIGSR*LMLFPS
Trigger: ACTAGGAAACAGCATTAGCCATCTTGAACCTATTGT...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCCGCCCAGTCCGAGCTaGAATTCCAAGGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPPPSPS*NSKAAS
Trigger: AGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCAAAATTAGCCAGATATaGTGGCGGGCTCCTATAATC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFKISQI*WRAPII
Trigger: GATTATAGGAGCCCGCCACCATATCTGGCTAATTTT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCAGCCTTCTGTTGCTTaGGCTTCTGCCTGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFQPSVA*ASACGV
Trigger: AACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACCAGCCTTCTGTTGCTTaGGCTTCTGCCTGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHQPSVA*ASACGV
Trigger: AACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTG...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACAATATCTGCCAGAGTaGAGTAAAGCCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKQYLPE*SKALLQ
Trigger: TTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCATAATTACCAAGAAATaGTGGATACAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFIITKK*WIQGKS
Trigger: GCTCTTGCCCTGTATCCATCATTTCTTGGTAATTAT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGTACCTTCCTTTGGGCTaGCTGCTGCAGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEYLPLG*LLQGEH
Trigger: ATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTA...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAATATTCTTTTGGCAGCTaGGACTTCAGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKYSFGS*DFRGFS
Trigger: TGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATA...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACCCAAGATCGAGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHPRSSH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATTCAGTGGCTCGATCTTGG...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCCAAGATCGAGCCACTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFPRSSH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATTCAGTGGCTCGATCTTGG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCATGCAGAGGTTGTGGTaGGCCAAGATCGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSMQRLW*AKIEPL
Trigger: CAGTGGCTCGATCTTGGCTCACCACAACCTCTGCAT...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCAGCTACTCGGGAGGCTaGGGCAGGAGAATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLSYSGG*GRRMQR
Trigger: CCTCTGCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAGTGGACCTTGCTCTTTaGCTTTCCCTTAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISVDLAL*LSLSKG
Trigger: CCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCAC...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFSHKFG*CSVEVV
Trigger: GACAACCTCAACTGAACAGCATCCAAACTTATGTGA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCAAAACATCACTTCAATaGCCTTTTCCATTAACTTGG +
Preference number: 4 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAKTSLQ*PFPLTW
Trigger: CCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATACTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATC +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKILWADC*RENIPI
Trigger: GATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAG...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGCCTCTGGGAGCTaGTGCCCGCAGACCACTCGC +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAAASGS*CPQTTR
Trigger: GCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGC...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACGCTGAGGCAGGAGAATaGAGAGGTTGTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHAEAGE*RGCGEP
Trigger: TGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGC...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACACCCCCACCCATACTaGCCTGTAAAATATTCCTAT +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKHPHPY*PVKYSY
Trigger: ATAGGAATATTTTACAGGGCAGTATGGGTGGGGGTG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCAGTCAAATAAAGGTGTaGAGAATCAAGGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFSQIKV*RIKEPN
Trigger: GTTTGGCTCCTTGATTCTGCACACCTTTATTTGACT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKDVSCV*TLLFAF
Trigger: AAAGGCAAAGAGCAAGGTCCACACACAGGAAACATC...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLHMLQR*KVGGFC
Trigger: GCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGGTAAATGGAGAAATTaGATCCCACACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFGKWRN*IPHLEA
Trigger: AGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMRWGGS*TAVWSA
Trigger: TGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACG...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATGAGCCTTCGTTGGGGTaGGAGCTGGACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYEPSLG*ELDSCL
Trigger: CAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTC...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTAGACAGCCACCTTATGTaGAAAATACTCGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLDSHLM*KILAPA
Trigger: GGCCGGCGCGAGTATTTTCCACATAAGGTGGCTGTC...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTTCCAAGGCTGCCTCTaGGAGCTGCTGCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNFQGCL*ELLPAD
Trigger: GTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCCGCCCAGTCCGAGCTaGAATTCCAAGGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPPPSPS*NSKAAS
Trigger: AGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGCCGCCCAGTCCGAGCTaGAATTCCAAGGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKPPSPS*NSKAAS
Trigger: AGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGG...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCTTTCATTGGGTCACCTaGTCGCAGAGGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLFHWVT*SQRRGQ
Trigger: CTGGCCGCGCCTCTGCGACCAGGTGACCCAATGAAA...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATTTTCTTCTTTCATTaGGTCACCTGGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKIFFFH*VTWSQR
Trigger: CCTCTGCGACCAGGTGACCCAATGAAAGAAGAAAAT...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCACAGACACAAAAATGTaGCTTCGATTTAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFTDTKM*LRFKAQ
Trigger: CTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCATAGCCTGGTCCACTaGCTAACTTCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSHSLVH*LTSAQA
Trigger: AGCCTGTGCTGAAGTTAGTCAGTGGACCAGGCTATG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR TCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTCAGCCTTCTGTTGCTTaGGCTTCTGCCTGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAQPSVA*ASACGV
Trigger: AACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTG...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAGGAAGCCCGTGTTTTaGTACAGTGCTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISRKPVF*YSAQSP
Trigger: TGGTGATTGAGCACTGTATCAAAACACGGGCTTCCT...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKITGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGCCTGGCCAATATGGTaGAACTTCATATTTACTAAA +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFAWPIW*NFIFTK
Trigger: TTTAGTAAATATGAAGTTTCACCATATTGGCCAGGC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACCTTCTGCAAACACATaGTCCAGAGGTGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLPSANT*SRGGRS
Trigger: CGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACCCTTCTGCAAACACATaGTCCAGAGGTGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHPSANT*SRGGRS
Trigger: CGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGG...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISFFCSS*SIQIHQ
Trigger: TTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATCTGGAATTCCAAGGCTaGCTCTGGGAGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNLEFQG*LWELLP
Trigger: GGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAG...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGCTGAGGCAGGAGAATaGAGAGGTTGTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTAEAGE*RGCGEP
Trigger: TGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAATCAGTTCCAGACTCTTaGATGAAGAATCCAACCCTT +
Preference number: 4 (lower is better)
Translates to: CQEPPECHWASNVKTDGKSVPDS*MKNPTL
Trigger: AAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGA...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNHMLQR*KVGGFC
Trigger: GCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGACAGCCACCTTATGTaGAAAATACTCGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLDSHLM*KILAPA
Trigger: GGCCGGCGCGAGTATTTTCCACATAAGGTGGCTGTC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTTTCATTGGGTCACCTaGTCGCAGAGGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNFHWVT*SQRRGQ
Trigger: CTGGCCGCGCCTCTGCGACCAGGTGACCCAATGAAA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCAGGCAGGAGTGCAGTaGCGCTATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLQAGVQ*RYQGSL
Trigger: CAGTGAGCCTTGATAGCGCCACTGCACTCCTGCCTG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTAATTTCAGCACTTTaGGAGGCTGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNVISAL*EAEAGR
Trigger: TCTACCCGCCTCAGCCTCCCAAAGTGCTGAAATTAC...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCAGCCTTCTGTTGCTTaGGCTTCTGCCTGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPQPSVA*ASACGV
Trigger: AACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATTCCAGACTCTTGGATaGAGAATCCAACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISFQTLG*RIQPFR
Trigger: TCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCACTGTACTGTGAGCTTTaGGAATGCCACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISLYCEL*ECHFQF
Trigger: GAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAG...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAAGGCTTTTGCTTTTCTaGTGTGAGAAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIRLLLF*CEKALC
Trigger: ACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCT...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTACCTTCCTTTGGGCTaGCTGCTGCAGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLYLPLG*LLQGEH
Trigger: ATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTA...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTACCTTCCTTTGGGCTaGCTGCTGCAGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTYLPLG*LLQGEH
Trigger: ATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGGTA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAGGAAGCCCGTGTTTTaGTACAGTGCTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNRKPVF*YSAQSP
Trigger: TGGTGATTGAGCACTGTATCAAAACACGGGCTTCCT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTAACAGCAAGGGCATGTaGCGAAGGAAGCCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPNSKGM*RRKPVF
Trigger: AAACACGGGCTTCCTTCGTCACATGCCCTTGCTGTT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTAACAGCAAGGGCATGTaGCGAAGGAAGCCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTNSKGM*RRKPVF
Trigger: AAACACGGGCTTCCTTCGTCACATGCCCTTGCTGTT...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATAACAGCAAGGGCATGTaGCGAAGGAAGCCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNNSKGM*RRKPVF
Trigger: AAACACGGGCTTCCTTCGTCACATGCCCTTGCTGTT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATTGAGGTGTTCTGAATaGAACCATAACAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKILRCSE*NHNSKG
Trigger: GCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNTGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATGTTGCTTGAGCTTCTaGCTGCGGAGTTTATCATCA +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISCCLSF*LRSLSS
Trigger: TGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATGTTGCTTGAGCTTCTaGCTGCGGAGTTTATCATCA +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKICCLSF*LRSLSS
Trigger: TGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCCTTCTGCAAACACATaGTCCAGAGGTGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNPSANT*SRGGRS
Trigger: CGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEEVKPF*KHMLQR
Trigger: CCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCCCACACTTAGAAGCTaGTGTTTTTACTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNPTLRS*CFYSWH
Trigger: GTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCAAAACATCACTTCAATaGCCTTTTCCATTAACTTGG +
Preference number: 4 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFKTSLQ*PFPLTW
Trigger: CCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATC +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSLWADC*RENIPI
Trigger: GATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACCTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATC +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHLWADC*RENIPI
Trigger: GATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAG...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATC +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLLWADC*RENIPI
Trigger: GATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGCATGGCCCCCACCGCTaGAGAAATCCACAATTCTGT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLHGPHR*RNPQFC
Trigger: ACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATG...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTTTCCCAGGCAGGAGTaGAGTGGCGCTATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKFPRQE*SGAIKA
Trigger: AGCCTTGATAGCGCCACTGCACTCCTGCCTGGGAAA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATTTTCCCAGGCAGGAGTaGAGTGGCGCTATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYFPRQE*SGAIKA
Trigger: AGCCTTGATAGCGCCACTGCACTCCTGCCTGGGAAA...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATACACCCCCACCCATACTaGCCTGTAAAATATTCCTAT +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIHPHPY*PVKYSY
Trigger: ATAGGAATATTTTACAGGGCAGTATGGGTGGGGGTG...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLHMLQR*KVGGFC
Trigger: GCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCCTCCTGAATGCCACTaGGCATCCAACGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLPPECH*ASNVKT
Trigger: CGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTAGTTCGAAACCAGCCTaGCCAACATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSSKPA*PTWRNP
Trigger: GGGGTTTCTCCATGTTGGCCAGGCTGGTTTCGAACT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACGTAATTTCAGCACTTTaGGAGGCTGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHVISAL*EAEAGR
Trigger: TCTACCCGCCTCAGCCTCCCAAAGTGCTGAAATTAC...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCTGTACTGTGAGCTTTaGGAATGCCACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNLYCEL*ECHFQF
Trigger: GAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATTTGCTTTTCTGATGTaGGAAGGCTCTCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIFAFLM*EGSLLV
Trigger: TACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCAATATCTGCCAGAGTaGAGTAAAGCCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEQYLPE*SKALLQ
Trigger: TTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGTTGAGGTGTTCTGAATaGAACCATAACAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPELRCSE*NHNSKG
Trigger: GCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAA...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTGCACTGTTTTCCTATaGGCCTTCGTTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKCTVFL*AFVGVG
Trigger: TCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGTGCACTGTTTTCCTATaGGCCTTCGTTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMCTVFL*AFVGVG
Trigger: TCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCA...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFTGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAGAGGAGCTTGTGAAGTaGGAAGGAAATTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKIEELVK*EGNCYS
Trigger: GGAATAACAATTTCCTTCTCACTTCACAAGCTCCTC...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAGCTACTCGGGAGGCTaGGGCAGGAGAATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASYSGG*GRRMQR
Trigger: CCTCTGCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCCTTCTGCAAACACATaGTCCAGAGGTGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMPSANT*SRGGRS
Trigger: CGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGG...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISNKGSL*SSTPGT
Trigger: AGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATT...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATTGTTCAACTGTTGCTaGTTCCTCAAAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKILFNCC*FLKARS
Trigger: TGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAGGTTGTTCAACTGTTaGTGCTTCCTCAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNRLFNC*CFLKAR
Trigger: TCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGAGGTTGTTCAACTGTTaGTGCTTCCTCAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPERLFNC*CFLKAR
Trigger: TCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGCATGGCCCCCACCGCTaGAGAAATCCACAATTCTGT +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKHGPHR*RNPQFC
Trigger: ACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATG...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATCATGGCCCCCACCGCTaGAGAAATCCACAATTCTGT +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYHGPHR*RNPQFC
Trigger: ACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATG...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAGCCACTCCACAAGCATaGAATGCTACTCCAATATTA +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISATPQA*NATPIL
Trigger: TAATATTGGAGTAGCATTGCATGCTTGTGGAGTGGC...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGAATCACCATGTCTGTTaGCACTCCACAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPENHHVC*HSTSMQ
Trigger: TTGCATGCTTGTGGAGTGGCAACAGACATGGTGATT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFFFCSS*SIQIHQ
Trigger: TTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSVSTFF*SSCSIQ
Trigger: CTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATAC...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGGCATTTGTGATGCTTTaGAGGGAGCCTTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEAFVML*REPLLP
Trigger: TGGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGC...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEDVSCV*TLLFAF
Trigger: AAAGGCAAAGAGCAAGGTCCACACACAGGAAACATC...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAGTTCCAGACTCTTaGATGAAGAATCCAACCCTT +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKISVPDS*MKNPTL
Trigger: AAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCA +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHQVGQG*GENITS
Trigger: TGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTG...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCAGCTCTCTGGCTCCATaGATATCACTTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFSSLAP*ISLERS
Trigger: ACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCT...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATACTAGTATTATTCTTTTaGCAGCTGAGACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEPPECHWASNVKTDGKILVLFF*QLRLQG
Trigger: CCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAG...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATATAATCCTGGCACTTTaGGAGGCTGAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNIILAL*EAEAAG
Trigger: TCCAGCCGCCTCAGCCTCCCAAAGTGCCAGGATTAT...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTCATCCTTCTGTTTGGTaGGAAAAGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTHPSVW*EKSRYR
Trigger: CCTGTACCTGGACTTTTCTCACCAAACAGAAGGATG...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTTCCAGACTCTTGGATaGAGAATCCAACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFFQTLG*RIQPFR
Trigger: TCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCGTTCTTCCTGTACTGTaGGCTTTGAGAATGCCACTT +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSVLPVL*ALRMPL
Trigger: AAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAAC...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCAATATCTGCCAGAGTaGAGTAAAGCCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFQYLPE*SKALLQ
Trigger: TTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTCATGATGGCAGCATGTaGGCAAGGACAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTHDGSM*ARTIPT
Trigger: TGTTGGAATTGTCCTTGCTCACATGCTGCCATCATG...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTACTGGGCATCCAACGTaGAGACGGATGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPTGHPT*RRMAKY
Trigger: ATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGAGGAGCTTGTGAAGTaGGAAGGAAATTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNEELVK*EGNCYS
Trigger: GGAATAACAATTTCCTTCTCACTTCACAAGCTCCTC...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGACTAGGCCAAGGTCTTaGAAATACTGGATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPETRPRS*KYWILN
Trigger: ATTGAGGATCCAGTATTTTCAAGACCTTGGCCTAGT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACAGTGCTTTCTCCTCATaGTACATGTTACACAGGGGT +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHSAFSS*YMLHRG
Trigger: ACCCCTGTGTAACATGTATCATGAGGAGAAAGCACT...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATGTGGACCTTGCTCTTTaGCTTTCCCTTAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYVDLAL*LSLSKG
Trigger: CCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCAC...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATCCTTCTGCAAACACATaGTCCAGAGGTGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNPSANT*SRGGRS
Trigger: CGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGG...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPEVKPF*KHMLQR
Trigger: CCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGCCCACACTTAGAAGCTaGTGTTTTTACTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLPTLRS*CFYSWH
Trigger: GTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGG...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCCCACACTTAGAAGCTaGTGTTTTTACTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNPTLRS*CFYSWH
Trigger: GTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCCCACACTTAGAAGCTaGTGTTTTTACTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPPTLRS*CFYSWH
Trigger: GTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EPPECHWASNVKTDGKISSHKFG*CSVEVV
Trigger: GACAACCTCAACTGAACAGCATCCAAACTTATGTGA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGCCACTCCACAAGCATaGAATGCTACTCCAATATTA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNATPQA*NATPIL
Trigger: TAATATTGGAGTAGCATTGCATGCTTGTGGAGTGGC...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCAATCACCATGTCTGTTaGCACTCCACAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFNHHVC*HSTSMQ
Trigger: TTGCATGCTTGTGGAGTGGCAACAGACATGGTGATT...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPFFCSS*SIQIHQ
Trigger: TTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTVSTFF*SSCSIQ
Trigger: CTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATAC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTGGCAAACAGCAATTTTaGACTATTGGTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPGKQQF*TIGGSS
Trigger: GGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCC...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGGTATAGTTGGGGGCTaGTCAGAAGATTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTGIVGG*SEDSLR
Trigger: TCTCAGAGAATCTTCTGACCAGCCCCCAACTATACC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTTCTACAGGTATAGTTaGGGGCTGGTCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSFYRYS*GLVRRF
Trigger: GAATCTTCTGACCAGCCCCCAACTATACCTGTAGAA...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GTSTSIILLAAETSGDSHDVSCV*TLLFAF
Trigger: AAAGGCAAAGAGCAAGGTCCACACACAGGAAACATC...GTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCCATTAACTTGGCCATaGTTGGTCTTGGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPPLTWP*LVLVLL
Trigger: TAGGAGGACCAAGACCAACCATGGCCAAGTTAATGG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCCATTAACTTGGCCATaGTTGGTCTTGGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNPLTWP*LVLVLL
Trigger: TAGGAGGACCAAGACCAACCATGGCCAAGTTAATGG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCCTTTTCCATTAACTTaGCCATGGTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFPFPLT*PWLVLV
Trigger: GACCAAGACCAACCATGGCCAAGTTAATGGAAAAGG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCA +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNQVGQG*GENITS
Trigger: TGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCA +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPQVGQG*GENITS
Trigger: TGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGTTCTGTCACCAGGTTTaGCCTGATTTGTTACCACAT +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEFCHQV*PDLLPH
Trigger: ATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAA...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATTTCTGTCACCAGGTTTaGCCTGATTTGTTACCACAT +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNFCHQV*PDLLPH
Trigger: ATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAA...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTAGCTCTCTGGCTCCATaGATATCACTTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANASSLAP*ISLERS
Trigger: ACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCT...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTAGCTCTCTGGCTCCATaGATATCACTTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTSSLAP*ISLERS
Trigger: ACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCT...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACAGGCAGGAGTGCAGTaGCGCTATCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAQAGVQ*RYQGSL
Trigger: CAGTGAGCCTTGATAGCGCCACTGCACTCCTGCCTG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCATCCTTCTGTTTGGTaGGAAAAGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLHPSVW*EKSRYR
Trigger: CCTGTACCTGGACTTTTCTCACCAAACAGAAGGATG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACAGCCTTCTGTTGCTTaGGCTTCTGCCTGCGGAGTT +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAQPSVA*ASACGV
Trigger: AACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCTGTACTGTGAGCTTTaGGAATGCCACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNLYCEL*ECHFQF
Trigger: GAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTCTTCCTGTACTGTaGGCTTTGAGAATGCCACTT +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAVLPVL*ALRMPL
Trigger: AAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAAC...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGAGGCTTTTGCTTTTCTaGTGTGAGAAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLRLLLF*CEKALC
Trigger: ACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCT...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATAGGCTTTTGCTTTTCTaGTGTGAGAAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNRLLLF*CEKALC
Trigger: ACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTGGATGCTGTTCAGTTaGGGTTGTCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNWMLFS*GCQQLW
Trigger: CCAAAGTTGTTGACAACCTCAACTGAACAGCATCCA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGCATGATGGCAGCATGTaGGCAAGGACAATTCCAACA +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKHDGSM*ARTIPT
Trigger: TGTTGGAATTGTCCTTGCTCACATGCTGCCATCATG...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCAGGAAGCCCGTGTTTTaGTACAGTGCTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLRKPVF*YSAQSP
Trigger: TGGTGATTGAGCACTGTATCAAAACACGGGCTTCCT...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGAACAGCAAGGGCATGTaGCGAAGGAAGCCCGTGTTT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAENSKGM*RRKPVF
Trigger: AAACACGGGCTTCCTTCGTCACATGCCCTTGCTGTT...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTTGAGGTGTTCTGAATaGAACCATAACAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTLRCSE*NHNSKG
Trigger: GCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGTGCACTGTTTTCCTATaGGCCTTCGTTGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAECTVFL*AFVGVG
Trigger: TCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCA...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATCATAGCCTGGTCCACTaGCTAACCTCTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNHSLVH*LTSLVT
Trigger: TGTCACCAAAGAGGTTAGTCAGTGGACCAGGCTATG...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTATTCTTTTGGCAGCTaGGACTTCAGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNYSFGS*DFRGFS
Trigger: TGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATAGTGCTTTCTCCTCATaGTACATGTTACACAGGGGT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNSAFSS*YMLHRG
Trigger: ACCCCTGTGTAACATGTATCATGAGGAGAAAGCACT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGATTGGTGGGAGCTCCTaGCTTGAAATAATCTGTATT +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEIGGSS*LEIICI
Trigger: AATACAGATTATTTCAAGGCAGGAGCTCCCACCAAT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR GCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTAAGGTCGGAGGCTTTTaGTTTTCTGATGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAKVGGF*FSDVRR
Trigger: CCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTT...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMEVKPF*KHMLQR
Trigger: CCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYEVKPF*KHMLQR
Trigger: CCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPEVKPF*KHMLQR
Trigger: CCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNSHKFG*CSVEVV
Trigger: GACAACCTCAACTGAACAGCATCCAAACTTATGTGA...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSNKGSL*SSTPGT
Trigger: AGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATT...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTCTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATC +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGLWADC*RENIPI
Trigger: GATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAG...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGCATGGCCCCCACCGCTaGAGAAATCCACAATTCTGT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAEHGPHR*RNPQFC
Trigger: ACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATG...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCGCCACTCCACAAGCATaGAATGCTACTCCAATATTA +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFATPQA*NATPIL
Trigger: TAATATTGGAGTAGCATTGCATGCTTGTGGAGTGGC...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTAATCACCATGTCTGTTaGCACTCCACAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTNHHVC*HSTSMQ
Trigger: TTGCATGCTTGTGGAGTGGCAACAGACATGGTGATT...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCGTGTTTTGATACAGTaGTCAATCACCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNRVLIQ*SITMSV
Trigger: AACAGACATGGTGATTGAGCACTGTATCAAAACACG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTCTGGTCTGCAAATCTaGACAGAATCATGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSSGLQI*TESCVP
Trigger: AGGAACACATGATTCTGTGCAGATTTGCAGACCAGA...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYVSTFF*SSCSIQ
Trigger: CTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATAC...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMVSTFF*SSCSIQ
Trigger: CTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATAC...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGGGTATAGTTGGGGGCTaGTCAGAAGATTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMGIVGG*SEDSLR
Trigger: TCTCAGAGAATCTTCTGACCAGCCCCCAACTATACC...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTTCTACAGGTATAGTTaGGGGCTGGTCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNFYRYS*GLVRRF
Trigger: GAATCTTCTGACCAGCCCCCAACTATACCTGTAGAA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTTCTACAGGTATAGTTaGGGGCTGGTCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTFYRYS*GLVRRF
Trigger: GAATCTTCTGACCAGCCCCCAACTATACCTGTAGAA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLDVSCV*TLLFAF
Trigger: AAAGGCAAAGAGCAAGGTCCACACACAGGAAACATC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTGTTGGTAGTAGCTaGTTCTTCCTGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSVGSS*FFLYCE
Trigger: CTCACAGTACAGGAAGAACCAGCTACTACCAACAGA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTCTGTTGGTAGTAGCTaGTTCTTCCTGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTSVGSS*FFLYCE
Trigger: CTCACAGTACAGGAAGAACCAGCTACTACCAACAGA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCCATTAACTTGGCCATaGTTGGTCTTGGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPPLTWP*LVLVLL
Trigger: TAGGAGGACCAAGACCAACCATGGCCAAGTTAATGG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCCTTTTCCATTAACTTaGCCATGGTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPPFPLT*PWLVLV
Trigger: GACCAAGACCAACCATGGCCAAGTTAATGGAAAAGG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCA +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPQVGQG*GENITS
Trigger: TGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTATTTTCTTCTTTCATTaGGTCACCTGGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAIFFFH*VTWSQR
Trigger: CCTCTGCGACCAGGTGACCCAATGAAAGAAGAAAAT...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACTAGTATTATTCTTTTaGCAGCTGAGACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TIPICLPPPPILPCKIFLLVLFF*QLRLQG
Trigger: CCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTCATCCTTCTGTTTGGTaGGAAAAGTCCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGHPSVW*EKSRYR
Trigger: CCTGTACCTGGACTTTTCTCACCAAACAGAAGGATG...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTTCCAGACTCTTGGATaGAGAATCCAACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKFQTLG*RIQPFR
Trigger: TCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTCCAGACTCTTGGATaGAGAATCCAACCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPFQTLG*RIQPFR
Trigger: TCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAA...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCTGTACTGTGAGCTTTaGGAATGCCACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPLYCEL*ECHFQF
Trigger: GAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCGTTCTTCCTGTACTGTaGGCTTTGAGAATGCCACTT +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLVLPVL*ALRMPL
Trigger: AAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAAC...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTTTGCTTTTCTGATGTaGGAAGGCTCTCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPFAFLM*EGSLLV
Trigger: TACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATAGGCTTTTGCTTTTCTaGTGTGAGAAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYRLLLF*CEKALC
Trigger: ACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCAATATCTGCCAGAGTaGAGTAAAGCCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPQYLPE*SKALLQ
Trigger: TTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTGGATGCTGTTCAGTTaGGGTTGTCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKWMLFS*GCQQLW
Trigger: CCAAAGTTGTTGACAACCTCAACTGAACAGCATCCA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATTGGATGCTGTTCAGTTaGGGTTGTCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYWMLFS*GCQQLW
Trigger: CCAAAGTTGTTGACAACCTCAACTGAACAGCATCCA...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGTTGAGGTGTTCTGAATaGAACCATAACAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMLRCSE*NHNSKG
Trigger: GCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAA...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGATGCCAAGAACCTCCTaGATGCCACTGGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWMPRTS*MPLGIQ
Trigger: TTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCAT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCTATTCTTTTGGCAGCTaGGACTTCAGGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLYSFGS*DFRGFS
Trigger: TGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATA...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGAGGAGCTTGTGAAGTaGGAAGGAAATTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAEELVK*EGNCYS
Trigger: GGAATAACAATTTCCTTCTCACTTCACAAGCTCCTC...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTGTTGCTTGAGCTTCTaGCTGCGGAGTTTATCATCA +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKCCLSF*LRSLSS
Trigger: TGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGAAGGTCGGAGGCTTTTaGTTTTCTGATGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMKVGGF*FSDVRR
Trigger: CCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAAGGTCGGAGGCTTTTaGTTTTCTGATGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKKVGGF*FSDVRR
Trigger: CCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTT...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNNKGSL*SSTPGT
Trigger: AGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLNKGSL*SSTPGT
Trigger: AGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATT...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTTTGTTCAACTGTTGCTaGTTCCTCAAAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANALFNCC*FLKARS
Trigger: TGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAA...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTGTTCAACTGTTGCTaGTTCCTCAAAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLLFNCC*FLKARS
Trigger: TGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAA...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTGGTCTGCAAATCTaGACAGAATCATGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSGLQI*TESCVP
Trigger: AGGAACACATGATTCTGTGCAGATTTGCAGACCAGA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTCTGGTCTGCAAATCTaGACAGAATCATGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLSGLQI*TESCVP
Trigger: AGGAACACATGATTCTGTGCAGATTTGCAGACCAGA...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACAAGAACCTCCTGAATaGCACTGGGCATCCAACGTG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAQEPPE*HWASNV
Trigger: CACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGGCATTTGTGATGCTTTaGAGGGAGCCTTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMAFVML*REPLLP
Trigger: TGGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGC...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTAGGCATGAGCCACCATaGCTGGCAGAAATATATTTA +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTRHEPP*LAEIYL
Trigger: TAAATATATTTCTGCCAGGCATGGTGGCTCATGCCT...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTAGGCATGAGCCACCATaGCTGGCAGAAATATATTTA +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPRHEPP*LAEIYL
Trigger: TAAATATATTTCTGCCAGGCATGGTGGCTCATGCCT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCAGTTCCAGACTCTTaGATGAAGAATCCAACCCTT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSVPDS*MKNPTL
Trigger: AAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTCAGTTCCAGACTCTTaGATGAAGAATCCAACCCTT +
Preference number: 4 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTSVPDS*MKNPTL
Trigger: AAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAACAACTTTGGTAAATaGAGAAATTGGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNNNFGK*RNWIPH
Trigger: GTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGCCTTTTCCATTAACTTaGCCATGGTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKPFPLT*PWLVLV
Trigger: GACCAAGACCAACCATGGCCAAGTTAATGGAAAAGG...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTCAAAGCTCGATCACTaGACATTTTACCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFSKLDH*TFYLPL
Trigger: CAAAGGAAGGTAAAATGTCCAGTGATCGAGCTTTGA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTTTCTGTCACCAGGTTTaGCCTGATTTGTTACCACAT +
Preference number: 4 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAFCHQV*PDLLPH
Trigger: ATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAA...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTTCTGTCACCAGGTTTaGCCTGATTTGTTACCACAT +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPFCHQV*PDLLPH
Trigger: ATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGCAATCATGTTATTTTTaGGAGAGCAGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLQSCYF*ESSSLA
Trigger: AGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTG...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCAACGTGAAGACGGATaGCAAAATATCAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNQREDG*QNIKCE
Trigger: TTCACATTTGATATTTTGCCATCCGTCTTCACGTTG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNTIGSR*LMLFPS
Trigger: ACTAGGAAACAGCATTAGCCATCTTGAACCTATTGT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTGGGAGCTCCTGCCTTaGAATAATCTGTATTTCAAC +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKWELLP*NNLYFN
Trigger: GTTGAAATACAGATTATTTCAAGGCAGGAGCTCCCA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR TCA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTACAAAAATTGTCTaGTCGTTCTACTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSTKIV*SFYYCR
Trigger: CCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGA...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR TCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTGTTCTTCCTGTACTGTaGGCTTTGAGAATGCCACTT +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGVLPVL*ALRMPL
Trigger: AAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAAC...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATAGGCTTTTGCTTTTCTaGTGTGAGAAGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNRLLLF*CEKALC
Trigger: ACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCT...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTGGATGCTGTTCAGTTaGGGTTGTCAACAACTTTGG +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNWMLFS*GCQQLW
Trigger: CCAAAGTTGTTGACAACCTCAACTGAACAGCATCCA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCTCCATGGATATCACTTaGACGGAGTATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLSMDIT*TEYPHS
Trigger: AGAATGTGGATACTCCGTTCAAGTGATATCCATGGA...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGACTAGGCCAAGGTCTTaGAAATACTGGATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMTRPRS*KYWILN
Trigger: ATTGAGGATCCAGTATTTTCAAGACCTTGGCCTAGT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTCAAACCACTGGTCTCTaGCACTCATACTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGQTTGL*HSYSRM
Trigger: CATTCTAGAGTATGAGTGTCAGAGACCAGTGGTTTG...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGCTGTAGTCCTTATGTaGAAGAAAACAGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNAVVLM*KKTGRV
Trigger: GACTCTGCCTGTTTTCTTTCACATAAGGACTACAGC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGATTGGTGGGAGCTCCTaGCTTGAAATAATCTGTATT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLIGGSS*LEIICI
Trigger: AATACAGATTATTTCAAGGCAGGAGCTCCCACCAAT...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATATTGGTGGGAGCTCCTaGCTTGAAATAATCTGTATT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNIGGSS*LEIICI
Trigger: AATACAGATTATTTCAAGGCAGGAGCTCCCACCAAT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR GCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTGTTGCTTGAGCTTCTaGCTGCGGAGTTTATCATCA +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGCCLSF*LRSLSS
Trigger: TGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACA...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGTGGACCTTGCTCTTTaGCTTTCCCTTAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAVDLAL*LSLSKG
Trigger: CCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCAC...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNSHKFG*CSVEVV
Trigger: GACAACCTCAACTGAACAGCATCCAAACTTATGTGA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGAAAACATCACTTCAATaGCCTTTTCCATTAACTTGG +
Preference number: 4 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEKTSLQ*PFPLTW
Trigger: CCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAAAACATCACTTCAATaGCCTTTTCCATTAACTTGG +
Preference number: 4 (lower is better)
Translates to: PPECHWASNVKTDGKISNKTSLQ*PFPLTW
Trigger: CCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCGCCACTCCACAAGCATaGAATGCTACTCCAATATTA +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLATPQA*NATPIL
Trigger: TAATATTGGAGTAGCATTGCATGCTTGTGGAGTGGC...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCGTGTTTTGATACAGTaGTCAATCACCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ECHWASNVKTDGKISNVNRVLIQ*SITMSV
Trigger: AACAGACATGGTGATTGAGCACTGTATCAAAACACG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTCTGGTCTGCAAATCTaGACAGAATCATGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKSGLQI*TESCVP
Trigger: AGGAACACATGATTCTGTGCAGATTTGCAGACCAGA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGTTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAA +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAEFFCSS*SIQIHQ
Trigger: TTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAA...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCATTTTCTTCTTTCATTaGGTCACCTTAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSIFFFH*VTLATN
Trigger: GTTTGTGGCTAAGGTGACCCAATGAAAGAAGAAAAT...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360505.9
CDS-3UTR CCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNDVSCV*TLLFAF
Trigger: AAAGGCAAAGAGCAAGGTCCACACACAGGAAACATC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTCTGTTGGTAGTAGCTaGTTCTTCCTGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGSVGSS*FFLYCE
Trigger: CTCACAGTACAGGAAGAACCAGCTACTACCAACAGA...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGGTAAATGGAGAAATTaGATCCCACACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLGKWRN*IPHLEA
Trigger: AGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTCCTTTTCCATTAACTTaGCCATGGTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGPFPLT*PWLVLV
Trigger: GACCAAGACCAACCATGGCCAAGTTAATGGAAAAGG...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGAGCTCTCTGGCTCCATaGATATCACTTGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAESSLAP*ISLERS
Trigger: ACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCT...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCAATCATGTTATTTTTaGGAGAGCAGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLQSCYF*ESSSLA
Trigger: AGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCAATCATGTTATTTTTaGGAGAGCAGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMQSCYF*ESSSLA
Trigger: AGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTG...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCAACGTGAAGACGGATaGCAAAATATCAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSQREDG*QNIKCE
Trigger: TTCACATTTGATATTTTGCCATCCGTCTTCACGTTG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTATTTTCTTCTTTCATTaGGTCACCTGGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGIFFFH*VTWSQR
Trigger: CCTCTGCGACCAGGTGACCCAATGAAAGAAGAAAAT...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTTTGCTTTTCTGATGTaGGAAGGCTCTCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNFAFLM*EGSLLV
Trigger: TACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR TCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGATAATTACCAAGAAATaGTGGATACAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKIITKK*WIQGKS
Trigger: GCTCTTGCCCTGTATCCATCATTTCTTGGTAATTAT...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGATAATTACCAAGAAATaGTGGATACAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMIITKK*WIQGKS
Trigger: GCTCTTGCCCTGTATCCATCATTTCTTGGTAATTAT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATATAATTACCAAGAAATaGTGGATACAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYIITKK*WIQGKS
Trigger: GCTCTTGCCCTGTATCCATCATTTCTTGGTAATTAT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMSHKFG*CSVEVV
Trigger: GACAACCTCAACTGAACAGCATCCAAACTTATGTGA...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGNKGSL*SSTPGT
Trigger: AGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATT...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR GCA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCAAAACATCACTTCAATaGCCTTTTCCATTAACTTGG +
Preference number: 4 (lower is better)
Translates to: CDALQGAFTSKISLLLSFKTSLQ*PFPLTW
Trigger: CCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCGTGTTTTGATACAGTaGTCAATCACCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLRVLIQ*SITMSV
Trigger: AACAGACATGGTGATTGAGCACTGTATCAAAACACG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGGCAAACAGCAATTTTaGACTATTGGTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAGKQQF*TIGGSS
Trigger: GGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCC...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGGGTAAATGGAGAAATTaGATCCCACACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKGKWRN*IPHLEA
Trigger: AGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACC...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACCATTAACTTGGCCATaGTTGGTCTTGGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAPLTWP*LVLVLL
Trigger: TAGGAGGACCAAGACCAACCATGGCCAAGTTAATGG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWQVGQG*GENITS
Trigger: TGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTG...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTCAAAGCTCGATCACTaGACATTTTACCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKSKLDH*TFYLPL
Trigger: CAAAGGAAGGTAAAATGTCCAGTGATCGAGCTTTGA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATTCAAAGCTCGATCACTaGACATTTTACCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYSKLDH*TFYLPL
Trigger: CAAAGGAAGGTAAAATGTCCAGTGATCGAGCTTTGA...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGGTTCTTCCTGTACTGTaGGCTTTGAGAATGCCACTT +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWVLPVL*ALRMPL
Trigger: AAGTGGCATTCTCAAAGCTCACAGTACAGGAAGAAC...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAATATCTGCCAGAGTaGAGTAAAGCCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWQYLPE*SKALLQ
Trigger: TTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTG...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATAACTCATCTTTGAATTaGAAAGAAACTAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYNSSLN*KETRPR
Trigger: CCTTGGCCTAGTTTCTTTTCAATTCAAAGATGAGTT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATTTCTATAGGCACAAATaGCTAAAATACTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: TSTSIILLAAETSGDSHYFYRHK*LKYSGL
Trigger: TAGCCCTGAGTATTTTAGTCATTTGTGCCTATAGAA...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAGGTTGTTCAACTGTTaGTGCTTCCTCAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLARLFNC*CFLKAR
Trigger: TCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCT...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGAGGTTGTTCAACTGTTaGTGCTTCCTCAAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWRLFNC*CFLKAR
Trigger: TCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATTCTACAGGTATAGTTaGGGGCTGGTCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAFYRYS*GLVRRF
Trigger: GAATCTTCTGACCAGCCCCCAACTATACCTGTAGAA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATCTGTTGGTAGTAGCTaGTTCTTCCTGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASVGSS*FFLYCE
Trigger: CTCACAGTACAGGAAGAACCAGCTACTACCAACAGA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGAACAACTTTGGTAAATaGAGAAATTGGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMNNFGK*RNWIPH
Trigger: GTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCAACAACTTTGGTAAATaGAGAAATTGGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPNNFGK*RNWIPH
Trigger: GTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTT...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCCTTTTCCATTAACTTaGCCATGGTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWPFPLT*PWLVLV
Trigger: GACCAAGACCAACCATGGCCAAGTTAATGGAAAAGG...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGCAATCATGTTATTTTTaGGAGAGCAGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAEQSCYF*ESSSLA
Trigger: AGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTG...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGTTTGCTTTTCTGATGTaGGAAGGCTCTCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWFAFLM*EGSLLV
Trigger: TACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAA...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGATAATTACCAAGAAATaGTGGATACAGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAEIITKK*WIQGKS
Trigger: GCTCTTGCCCTGTATCCATCATTTCTTGGTAATTAT...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATCCATGGATATCACTTaGACGGAGTATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASMDIT*TEYPHS
Trigger: AGAATGTGGATACTCCGTTCAAGTGATATCCATGGA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGAGTTTATCATCATTATaGACTCTAACAGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMSLSSL*TLTGSL
Trigger: TAGTGAGCCTGTTAGAGTGCATAATGATGATAAACT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCAGTTTATCATCATTATaGACTCTAACAGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLSLSSL*TLTGSL
Trigger: TAGTGAGCCTGTTAGAGTGCATAATGATGATAAACT...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR GCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGTTGTTCAACTGTTGCTaGTTCCTCAAAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWLFNCC*FLKARS
Trigger: TGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAA...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGGGTAAATGGAGAAATTaGATCCCACACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAEGKWRN*IPHLEA
Trigger: AGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACC...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACTAGTATTATTCTTTTaGCAGCTGAGACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLALVLFF*QLRLQG
Trigger: CCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATCTACAAAAATTGTCTaGTCGTTCTACTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASTKIV*SFYYCR
Trigger: CCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394728.4
ENST00000515279.6
CDS-3UTR GCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCGTGTTTTGATACAGTaGTCAATCACCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWRVLIQ*SITMSV
Trigger: AACAGACATGGTGATTGAGCACTGTATCAAAACACG...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATCAAAGCTCGATCACTaGACATTTTACCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASKLDH*TFYLPL
Trigger: CAAAGGAAGGTAAAATGTCCAGTGATCGAGCTTTGA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACAATAGGTTCAAGATaGCTAATGCTGTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: NCYSCDGTSTSIILLAAETIGSR*LMLFPS
Trigger: ACTAGGAAACAGCATTAGCCATCTTGAACCTATTGT...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAACTCATCTTTGAATTaGAAAGAAACTAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLANSSLN*KETRPR
Trigger: CCTTGGCCTAGTTTCTTTTCAATTCAAAGATGAGTT...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR TCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATTCTATAGGCACAAATaGCTAAAATACTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAFYRHK*LKYSGL
Trigger: TAGCCCTGAGTATTTTAGTCATTTGTGCCTATAGAA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAACAACTTTGGTAAATaGAGAAATTGGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: EGNCYSCDGTSTSIILLANNFGK*RNWIPH
Trigger: GTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTT...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CCA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGAACAACTTTGGTAAATaGAGAAATTGGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWNNFGK*RNWIPH
Trigger: GTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp GCGCCCTCTTTACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: APSLPGRRGAARQGG*VSVSATWAACAFPP
Trigger: GGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTAAAGAGGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512828.1
CDS TCA 90 bp TTGGGTCACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LGHLVAEARPGREGA*ACRRPGPPAPSRPV
Trigger: GACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTGACCCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515279.6
CDS TCA 90 bp CCTCTTTACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLYLVAEARPGREGA*ACRRPGPPAPSRPV
Trigger: GACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTAAAGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512828.1
CDS GCA 90 bp TTCATTGGGTCACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: FIGSPGRRGAARQGG*VSVSATWAACAFPP
Trigger: GGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTGACCCAATGAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515279.6
CDS TCA 90 bp GATAATTACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTGCGTaGGCGTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: DNYLVAEARPGREGA*ACRRPGPPAPSRPV
Trigger: GACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTAATTATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515255.5
CDS GCA 90 bp GCCAGGCAGGGAGGGTGCGTGAGCGTGTCGGCGACCTGGGCCGCCTaGGCCTTCCCGCCCAGTCCGAGCTGGAATTCCAAGGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ARQGGCVSVSATWAA*AFPPSPSWNSKAAS
Trigger: AGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 90 bp GGCCGCCTGCGCCTTCCCGCCCAGTCCGAGCTGGAATTCCAAGGCTaGCTCTGGGAGCTGCTGCCCGCAGACCACTCGCCTCCACAGACG +
Preference number: 5 (lower is better)
Translates to: GRLRLPAQSELEFQG*LWELLPADHSPPQT
Trigger: CGTCTGTGGAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCGCAGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp GTGTCGGCGACCTGGGCCGCCTGCGCCTTCCCGCCCAGTCCGAGCTaGAATTCCAAGGCTGCCTCTGGGAGCTGCTGCCCGCAGACCACT +
Preference number: 5 (lower is better)
Translates to: VSATWAACAFPPSPS*NSKAASGSCCPQTT
Trigger: AGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp CTGCGCCTTCCCGCCCAGTCCGAGCTGGAATTCCAAGGCTGCCTCTaGGAGCTGCTGCCCGCAGACCACTCGCCTCCACAGACGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LRLPAQSELEFQGCL*ELLPADHSPPQTPG
Trigger: TCCTGGCGTCTGTGGAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 90 bp CCGCCCAGTCCGAGCTGGAATTCCAAGGCTGCCTCTGGGAGCTGCTaGCCGCAGACCACTCGCCTCCACAGACGCCAGGAGAAAAACGAC +
Preference number: 5 (lower is better)
Translates to: PPSPSWNSKAASGSC*PQTTRLHRRQEKND
Trigger: GTCGTTTTTCTCCTGGCGTCTGTGGAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 90 bp TTCCCGCCCAGTCCGAGCTGGAATTCCAAGGCTGCCTCTGGGAGCTaGTGCCCGCAGACCACTCGCCTCCACAGACGCCAGGAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: FPPSPSWNSKAASGS*CPQTTRLHRRQEKN
Trigger: GTTTTTCTCCTGGCGTCTGTGGAGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp ACTCGCCTCCACAGACGCCAGGAGAAAAACGACAGCCACCTTATGTaGAAAATACTCGCGCCGGCCGTCATTCATAATCCGGCGGACCGG +
Preference number: 5 (lower is better)
Translates to: TRLHRRQEKNDSHLM*KILAPAVIHNPADR
Trigger: CCGGTCCGCCGGATTATGAATGACGGCCGGCGCGAGTATTTTCCACATAAGGTGGCTGTCGTTTTTCTCCTGGCGTCTGTGGAGGCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp CTCGGGAGGCTGAGGCAGGAGAATGCAGAGGTTGTGGTGAGCCAAGATCGAGCCCCCTTTTCCATTAACTaGGCCATGGTTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LGRLRQENAEVVVSQDRAPFSIN*AMVGLG
Trigger: ACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGG...GGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCTCCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCCCTTTTCCATTAACTaGGCCATGGTTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFPFSIN*AMVGLG
Trigger: ACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGG...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGATGCATCCTTCTGTTaGGTGAGAAAAGTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFDASFC*VRKVQV
Trigger: TACCTGGACTTTTCTCACCAAACAGAAGGATGCATC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISSAFCC*SFCLRS
Trigger: ACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QEPPECHWASNVKTDGKISISLL*LELLPA
Trigger: CGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAATCCTGTGTGTGGACCTaGCTCTTTGCCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: CQEPPECHWASNVKTDGKSCVWT*LFAFPL
Trigger: TAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGA...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCT +
Preference number: 5 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFFSSRL*DEESNP
Trigger: AGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFGLHIS*DAVQLR
Trigger: CCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACAATCACCATGTCTGTaGCCACTCCACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: CQEPPECHWASNVKTDGKQSPCL*PLHKHA
Trigger: TGCATGCTTGTGGAGTGGCAACAGACATGGTGATTG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTCCTATGAGCCTTCGTaGGGGTGGGAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: CDALQGAFTSKISLLLSFSYEPS*GWELDS
Trigger: GCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTCCTATGAGCCTTCGTaGGGGTGGGAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSSYEPS*GWELDS
Trigger: GCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGA...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTATCCTATGAGCCTTCGTaGGGGTGGGAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: TIPICLPPPPILPCKIFLSYEPS*GWELDS
Trigger: GCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGA...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp AGAATCCAACCCTTCAGATGTTTCCTGTGTGTGGACCTTGCTCTTTaGCTTTCCCTTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: RIQPFRCFLCVDLAL*LSLSKGRPNSISLL
Trigger: CAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 90 bp AAGCACATGCACTGTTTTCCTATGAGCCTTCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCAAATCTGCACAGAATCATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KHMHCFPMSLRWGGS*TAVWSANLHRIMCS
Trigger: GGAACACATGATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCATGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PPECHWASNVKTDGKISNSISLL*LELLPA
Trigger: CGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGA...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTCCTATGAGCCTTCGTaGGGGTGGGAGCTGGACAGC +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNSYEPS*GWELDS
Trigger: GCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp GCCTTTCCCTTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGGAGTTTATCATCATTATGCACTCTA +
Preference number: 5 (lower is better)
Translates to: AFPLVRGGPTPSAFC*LSFCLRSLSSLCTL
Trigger: TAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAAGGGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS GCA 90 bp ACAGGGCAAGAGCACAATATCTGCCAGAGTGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGGTGGAAGGTCGGAGGCTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: TGQEHNICQSEVKPF*KHMLQRWKVGGFCF
Trigger: AAAGCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTGTGCTCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 90 bp TGCCAGAGTGAAGTAAAGCCCTTCTGCAAACACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGCTTTTCTGATGTGAGAAGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: CQSEVKPFCKHMLQR*KVGGFCFSDVRRLS
Trigger: AGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS-3UTR CAA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTATCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: TIPICLPPPPILPCKIFLSAFCC*SFCLRS
Trigger: ACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGA...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: CDALQGAFTSKISLLLSFSISLL*LELLPA
Trigger: CGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGA...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATACAATCACCATGTCTGTaGCCACTCCACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: QEPPECHWASNVKTDGKIQSPCL*PLHKHA
Trigger: TGCATGCTTGTGGAGTGGCAACAGACATGGTGATTG...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGCCAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAACTCCATGGATATCACTaGAACGGAGTATCCACATTC +
Preference number: 5 (lower is better)
Translates to: CQEPPECHWASNVKTDGKLHGYH*NGVSTF
Trigger: GAATGTGGATACTCCGTTCAAGTGATATCCATGGAG...TTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp CTCTGGCTCCATGGATATCACTTGAACGGAGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAGATCCACCAAGCACATGCACTGTTT +
Preference number: 5 (lower is better)
Translates to: LWLHGYHLNGVSTFF*SSCSIQIHQAHALF
Trigger: AAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp AGACTCTTGGATGAAGAATCCAACCCTTCAGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTTCCCTTAGTAAGGGGAGGCCCAACT +
Preference number: 5 (lower is better)
Translates to: RLLDEESNPSDVSCV*TLLFAFPLVRGGPT
Trigger: AGTTGGGCCTCCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 90 bp GCTGCAGGGAGAACATTCCAATCAAGAGTCCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCAATGCCCTTTTCCATTAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: AAGRTFQSRVQVGQG*GENITSMPFSINLA
Trigger: GGCCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp CATGGCCCCCACCGCTGCAGAAATCCACAATTCTGTCACCAGGTTTaGCCTGATTTGTTACCACATAGACAAGGTTGTTCAACTGTTGCT +
Preference number: 5 (lower is better)
Translates to: HGPHRCRNPQFCHQV*PDLLPHRQGCSTVA
Trigger: AGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISKVVQL*LLPQSS
Trigger: CGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTT...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGATTCTTCTGCAGCTCTaGCTCGATCCAGATCCACCA +
Preference number: 5 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEILLQL*LDPDPP
Trigger: TGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAAT...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAGCATTTGTGATGCTTaGCAGGGAGCCTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISSICDA*QGAFTS
Trigger: GGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGCT...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GCTACTTGGGAGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTGGGGTTCTTCAAGCAGATTTTATaGAGGATGACAAGCTACACA +
Preference number: 5 (lower is better)
Translates to: ATWEAEAAELLEPGRLGFFKQIL*RMTSYT
Trigger: TGTGTAGCTTGTCATCCTCAATAAAATCTGCTTGAA...GAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCTCCCAAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS TCA 90 bp TGGATCCCACACTTAGAAGCTGCTGTTTTTACTCCTGGCACTTCCTaGATCCTCTGGTACCAAGAGGCTAGCAATGGAAATTCTACCAGC +
Preference number: 5 (lower is better)
Translates to: WIPHLEAAVFTPGTS*ILWYQEASNGNSTS
Trigger: GCTGGTAGAATTTCCATTGCTAGCCTCTTGGTACCAGAGGATTCAGGAAGTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGTCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMSAFCC*SFCLRS
Trigger: ACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGA...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPSAFCC*SFCLRS
Trigger: ACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGA...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGCCCTTTTCCATTAACTaGGCCATGGTTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEPFSIN*AMVGLG
Trigger: ACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGG...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCAATCACCATGTCTGTaGCCACTCCACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSQSPCL*PLHKHA
Trigger: TGCATGCTTGTGGAGTGGCAACAGACATGGTGATTG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATAAGGAAGCCCGTGTTTaGATACAGTGCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: PPECHWASNVKTDGKISNKEARV*IQCSIT
Trigger: GGTGATTGAGCACTGTATCAAAACACGGGCTTCCTT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAACAATCATGTTATTTTaGGGAGAGCAGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISTIMLF*GEQLSG
Trigger: GCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGT...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS TCA 90 bp ATGTTATTTTTGGGAGAGCAGCTCTCTGGCTCCATGGATATCACTTaGACGGAGTATCCACATTCTTCTGCAGCTCTTGCTCGATCCAGA +
Preference number: 5 (lower is better)
Translates to: MLFLGEQLSGSMDIT*TEYPHSSAALARSR
Trigger: TCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS GCA 90 bp CATGGATATCACTTGAACGGAGTATCCACATTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAAGCACATGCACTGTTTTCCTATGAG +
Preference number: 5 (lower is better)
Translates to: HGYHLNGVSTFFCSS*SIQIHQAHALFSYE
Trigger: CTCATAGGAAAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp TGTTTTCCTATGAGCCTTCGTTGGGGTGGGAGCTGGACAGCTGTCTaGTCTGCAAATCTGCACAGAATCATGTGTTCCTTGTATGATAAA +
Preference number: 5 (lower is better)
Translates to: CFPMSLRWGGSWTAV*SANLHRIMCSLYDK
Trigger: TTTATCATACAAGGAACACATGATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp CTCCCACAATCATGTTATTTTTGGGAGAGCAGCTCTCTGGCTCCATaGATATCACTTGAACGGAGTATCCACATTCTTCTGCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPQSCYFWESSSLAP*ISLERSIHILLQLL
Trigger: CAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp AATGGGGACTCCCACAATCATGTTATTTTTGGGAGAGCAGCTCTCTaGCTCCATGGATATCACTTGAACGGAGTATCCACATTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: NGDSHNHVIFGRAAL*LHGYHLNGVSTFFC
Trigger: GCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGTGGGAGTCCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTAGCAATTTTGGACTATaGGTGGGAGCTCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPSNFGL*VGAPAL
Trigger: CAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp ATGACAAGCTACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: MTSYTDTKMWLRFKAQKGSISLL*LELLPA
Trigger: CGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGA...ACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGTAGCTTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCT +
Preference number: 5 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEFSSRL*DEESNP
Trigger: AGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAA...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCATTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISLDAVQ*RLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAA...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: QEPPECHWASNVKTDGKILDAVQ*RLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAA...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCCCTTTTCCATTAACTaGGCCATGGTTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSPFSIN*AMVGLG
Trigger: ACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSKVVQL*LLPQSS
Trigger: CGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTT...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTAAAGGAAGCCCGTGTTTaGATACAGTGCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: TIPICLPPPPILPCKIFLKEARV*IQCSIT
Trigger: GGTGATTGAGCACTGTATCAAAACACGGGCTTCCTT...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATATTCTTCTGCAGCTCTaGCTCGATCCAGATCCACCA +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNILLQL*LDPDPP
Trigger: TGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAAT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATACAATCATGTTATTTTaGGGAGAGCAGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PPECHWASNVKTDGKISNTIMLF*GEQLSG
Trigger: GCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGT...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAGCAATTTTGGACTATaGGTGGGAGCTCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKSNFGL*VGAPAL
Trigger: CAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCT...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATAGCAATTTTGGACTATaGGTGGGAGCTCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: TSTSIILLAAETSGDSHYSNFGL*VGAPAL
Trigger: CAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATAGGCAAACAGCAATTTaGGACTATTGGTGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNRQTAI*DYWWEL
Trigger: GAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCT...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCACCTGCTCTACAAAAATaGTCTGATCGTTCTACTACT +
Preference number: 5 (lower is better)
Translates to: EPPECHWASNVKTDGKISPALQK*SDRSTT
Trigger: AGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGG...TGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: NCYSCDGTSTSIILLAAESISLL*LELLPA
Trigger: CGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGA...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGTCCTGTGTGTGGACCTaGCTCTTTGCCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMSCVWT*LFAFPL
Trigger: TAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGA...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CAAGAACCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATAGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: QEPPECHWASNVKTDGKIAVQLR*STTLVN
Trigger: ATTTACCAAAGTTGTTGACAACCTCAACTGAACAGC...TATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CDALQGAFTSKISLLLSFGLHIS*DAVQLR
Trigger: CCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAKVVQL*LLPQSS
Trigger: CGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTT...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCCAGGTTTGGCCTGATTaGTTACCACATAGACAAGGT +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSQVWPD*LPHRQG
Trigger: ACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTG...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACGATTCCAATATGTCTCCCACCCCCACCCATACTGCCCTGTAAAATATTCCTACAGGTTTGGCCTGATTaGTTACCACATAGACAAGGT +
Preference number: 5 (lower is better)
Translates to: TIPICLPPPPILPCKIFLQVWPD*LPHRQG
Trigger: ACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTG...TAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCAATCACCATGTCTGTaGCCACTCCACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMQSPCL*PLHKHA
Trigger: TGCATGCTTGTGGAGTGGCAACAGACATGGTGATTG...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGAAGGAAGCCCGTGTTTaGATACAGTGCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLKEARV*IQCSIT
Trigger: GGTGATTGAGCACTGTATCAAAACACGGGCTTCCTT...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATATTCTTCTGCAGCTCTaGCTCGATCCAGATCCACCA +
Preference number: 5 (lower is better)
Translates to: TSTSIILLAAETSGDSHYILLQL*LDPDPP
Trigger: TGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAAT...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCATTTTCTTCTTTCATaGGGTCACCTGGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPHFLLS*GHLVAE
Trigger: CTCTGCGACCAGGTGACCCAATGAAAGAAGAAAATG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGAGCATTTGTGATGCTTaGCAGGGAGCCTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLSICDA*QGAFTS
Trigger: GGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGCT...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp TTGGCCATGGTTGGTCTTGGTCCTCCTATAAATAAAGGATCGCTTTaGTCTTCTACACCTGGGACTTCACATAAGTTTGGATGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LAMVGLGPPINKGSL*SSTPGTSHKFGCCS
Trigger: TGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTATTTATAGGAGGACCAAGACCAACCATGGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CCA 90 bp AAAATACCCCACCGCTGCAGAAATCCACAATTCTGTCACCAGGTTTaGCCTGATTTGTTACCACATAGACAAGGTTGTTCAACTGTTGCT +
Preference number: 5 (lower is better)
Translates to: KIPHRCRNPQFCHQV*PDLLPHRQGCSTVA
Trigger: AGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484843.1
CDS-3UTR CAA 90 bp CCTCCTGAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATCATTTTCTTCTTTCATaGGGTCACCTTAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: PPECHWASNVKTDGKISNHFLLS*GHLSHK
Trigger: TTTGTGGCTAAGGTGACCCAATGAAAGAAGAAAATG...ATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360505.9
CDS-3UTR CAA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTGATGCATCCTTCTGTTaGGTGAGAAAAGTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPDASFC*VRKVQV
Trigger: TACCTGGACTTTTCTCACCAAACAGAAGGATGCATC...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATGATGCATCCTTCTGTTaGGTGAGAAAAGTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNDASFC*VRKVQV
Trigger: TACCTGGACTTTTCTCACCAAACAGAAGGATGCATC...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGATGCATCCTTCTGTTaGGTGAGAAAAGTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLDASFC*VRKVQV
Trigger: TACCTGGACTTTTCTCACCAAACAGAAGGATGCATC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGAGGCAAACAGCAATTTaGGACTATTGGTGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMRQTAI*DYWWEL
Trigger: GAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCT...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAGGCAAACAGCAATTTaGGACTATTGGTGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKRQTAI*DYWWEL
Trigger: GAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCT...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCATCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: EGNCYSCDGTSTSIILLASAFCC*SFCLRS
Trigger: ACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGA...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTCCTGTGTGTGGACCTaGCTCTTTGCCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNSCVWT*LFAFPL
Trigger: TAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNGLHIS*DAVQLR
Trigger: CCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLGLHIS*DAVQLR
Trigger: CCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCCCCTTTTCCATTAACTaGGCCATGGTTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLPFSIN*AMVGLG
Trigger: ACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGG...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKKVVQL*LLPQSS
Trigger: CGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTT...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTCAGGTTTGGCCTGATTaGTTACCACATAGACAAGGT +
Preference number: 5 (lower is better)
Translates to: DFPVAFLPEHNRFKMANAQVWPD*LPHRQG
Trigger: ACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTG...AGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTCTCCATGGATATCACTaGAACGGAGTATCCACATTC +
Preference number: 5 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTLHGYH*NGVSTF
Trigger: GAATGTGGATACTCCGTTCAAGTGATATCCATGGAG...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTCTCCATGGATATCACTaGAACGGAGTATCCACATTC +
Preference number: 5 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPLHGYH*NGVSTF
Trigger: GAATGTGGATACTCCGTTCAAGTGATATCCATGGAG...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTTGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTACAATCATGTTATTTTaGGGAGAGCAGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: FVMLCREPLLPRFPCCFPTIMLF*GEQLSG
Trigger: GCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGT...AGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTATCATTTTCTTCTTTCATaGGGTCACCTGGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: TSTSIILLAAETSGDSHYHFLLS*GHLVAE
Trigger: CTCTGCGACCAGGTGACCCAATGAAAGAAGAAAATG...ATAGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ACACAGACACAAAAATGTGGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCCATTTTCTTCTTTCATaGGGTCACCTGGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: TQTQKCGFDLRHRKVNEPHFLLS*GHLVAE
Trigger: CTCTGCGACCAGGTGACCCAATGAAAGAAGAAAATG...GGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCCACATTTTTGTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp TGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCTGAGGAATTAAACATCACATaGGCAAGATCAGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: CFAGSLYFQDFPVAFLPEELNIT*ARSEEL
Trigger: AAGCTCCTCTGATCTTGCCAATGTGATGTTTAATTC...CTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp GCCTTCTGTTGCTTGAGCTTCTGCCTGCGGAGTTTATCATCATTATaGACTCTAACAGGCTCACTAAGCTTTTTCTCTAGCTGTAGTATT +
Preference number: 5 (lower is better)
Translates to: AFCCLSFCLRSLSSL*TLTGSLSFFSSCSI
Trigger: AATACTACAGCTAGAGAAAAAGCTTAGTGAGCCTGTTAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 90 bp TGCTGTTCAGTTGAGGTTGTCAACAACTTTGGTAAATGGAGAAATTaGATCCCACACTTAGAAGCTGCTGTTTTTACTCCTGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: CCSVEVVNNFGKWRN*IPHLEAAVFTPGTS
Trigger: GGAAGTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCCCTGCTCTACAAAAATaGTCTGATCGTTCTACTACT +
Preference number: 5 (lower is better)
Translates to: CDALQGAFTSKISLLLSFPALQK*SDRSTT
Trigger: AGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGG...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp AGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGAACCTCTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCT +
Preference number: 5 (lower is better)
Translates to: STIGSRWLMLFPSYAKNLFSSRL*DEESNP
Trigger: AGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAA...GAGGTTCTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCT +
Preference number: 5 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKFSSRL*DEESNP
Trigger: AGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAA...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp CCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: PVAFLPEHNRFKMANAVSAVQLR*STTLVN
Trigger: ATTTACCAAAGTTGTTGACAACCTCAACTGAACAGC...GGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNLDAVQ*RLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGTTTCCTAGTTATGCCAAGGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: FLSTIGSRWLMLFPSYAKGLHIS*DAVQLR
Trigger: CCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC...CTTGGCATAACTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp AAGATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCAGGTTTGGCCTGATTaGTTACCACATAGACAAGGT +
Preference number: 5 (lower is better)
Translates to: KISLLLSFLSTIGSRWLMQVWPD*LPHRQG
Trigger: ACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTG...CATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp TGTGATGCTTTGCAGGGAGCCTTTACTTCCAAGATTTCCCTGTTGCTTTCCTTCGAATTAAACATCACATaGGCAAGATCAGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: CDALQGAFTSKISLLLSFELNIT*ARSEEL
Trigger: AAGCTCCTCTGATCTTGCCAATGTGATGTTTAATTC...GAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCCCTGCAAAGCATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp GGATCGCTTTGCTCTTCTACACCTGGGACTTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTCAACAACTTTGGTAAATGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: GSLCSSTPGTSHKFG*CSVEVVNNFGKWRN
Trigger: ATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATTCTCTACTCACCTCTTaGGTGACAACTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNSLLTS*VTTKQI
Trigger: AATTTGCTTAGTTGTCACCAAAGAGGTGAGTAGAGA...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTTCTCTACTCACCTCTTaGGTGACAACTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTSLLTS*VTTKQI
Trigger: AATTTGCTTAGTTGTCACCAAAGAGGTGAGTAGAGA...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAATGCCACTGGGCATCCAACGTGAAGACGGATGGCAAAATATCAAATGTGAATCCTGCTCTACAAAAATaGTCTGATCGTTCTACTACT +
Preference number: 5 (lower is better)
Translates to: ECHWASNVKTDGKISNVNPALQK*SDRSTT
Trigger: AGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGG...ATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000515279.6
CDS-3UTR CAA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGTCCTGTGTGTGGACCTaGCTCTTTGCCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWSCVWT*LFAFPL
Trigger: TAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGA...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLAVQLR*STTLVN
Trigger: ATTTACCAAAGTTGTTGACAACCTCAACTGAACAGC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGACTTCAGGGGATTCTCACTGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: EPPLVLFFWQLRLQGILTAVQLR*STTLVN
Trigger: ATTTACCAAAGTTGTTGACAACCTCAACTGAACAGC...AGTGAGAATCCCCTGAAGTCTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp ATTTCCCTGTTGCTTTCCTTCCTGAGCACAATAGGTTCAAGATGGCTAATGCTGGAATTAAACATCACATaGGCAAGATCAGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: ISLLLSFLSTIGSRWLMLELNIT*ARSEEL
Trigger: AAGCTCCTCTGATCTTGCCAATGTGATGTTTAATTC...CAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATTTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNLDAVQ*RLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAA...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAAAGGAAGCCCGTGTTTaGATACAGTGCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: EGNCYSCDGTSTSIILLAKEARV*IQCSIT
Trigger: GGTGATTGAGCACTGTATCAAAACACGGGCTTCCTT...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGAGCATTTGTGATGCTTaGCAGGGAGCCTTTACTTCC +
Preference number: 5 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWSICDA*QGAFTS
Trigger: GGAAGTAAAGGCTCCCTGCAAAGCATCACAAATGCT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS CCA 90 bp CAAAAATTGTCTGATCGTTCTACTACTGCAGGCAAACAGCAATTTTaGACTATTGGTGGGAGCTCCTGCCTTGAAATAATCTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: QKLSDRSTTAGKQQF*TIGGSSCLEIICIS
Trigger: TGAAATACAGATTATTTCAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCTGCAGTAGTAGAACGATCAGACAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000484843.1
ENST00000509336.5
ENST00000510865.5
ENST00000515279.6
CDS CCA 90 bp AAGTTTGGATGCTGTTCAGTTGAGGTTGTCAACAACTTTGGTAAATaGAGAAATTGGATCCCACACTTAGAAGCTGCTGTTTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: KFGCCSVEVVNNFGK*RNWIPHLEAAVFTP
Trigger: AGGAGTAAAAACAGCAGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS-3UTR CAA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCT +
Preference number: 5 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWFSSRL*DEESNP
Trigger: AGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAA...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GGCTTCGATTTAAGGCACAGAAAGGTTAATGAGCCCTTGACAACTACAGATAATGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: GFDLRHRKVNEPLTTTDNAVQLR*STTLVN
Trigger: ATTTACCAAAGTTGTTGACAACCTCAACTGAACAGC...ATTATCTGTAGTTGTCAAGGGCTCATTAACCTTTCTGTGCCTTAAATCGAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS-3UTR CAA 90 bp AATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCAGCTGAGTTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTG +
Preference number: 5 (lower is better)
Translates to: NCYSCDGTSTSIILLAAELDAVQ*RLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAA...CTCAGCTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGCACTCCATGGATATCACTaGAACGGAGTATCCACATTC +
Preference number: 5 (lower is better)
Translates to: EGNCYSCDGTSTSIILLALHGYH*NGVSTF
Trigger: GAATGTGGATACTCCGTTCAAGTGATATCCATGGAG...TGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS-3UTR CAA 90 bp GAGAAGGAAATTGTTATTCCTGTGATGGAACCTCCACTAGTATTATTCTTTTGGACAATCATGTTATTTTaGGGAGAGCAGCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EKEIVIPVMEPPLVLFFWTIMLF*GEQLSG
Trigger: GCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGT...CCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394728.4
ENST00000394730.7
ENST00000515279.6
CDS GCA 90 bp AGTAAGATAACAGAAATAAAGTTACAGATGTATGAAGAGGAAAGATaGATCCTTCTGTTTGGTGAGAAAAGTCCAGGTACAGGTATTCTT +
Preference number: 5 (lower is better)
Translates to: SKITEIKLQMYEEER*ILLFGEKSPGTGIL
Trigger: AAGAATACCTGTACCTGGACTTTTCTCACCAAACAGAAGGATGCATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGTTATCTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000509336.5
ENST00000510865.5
ENST00000512828.1
ENST00000515279.6
CDS CCA 72 bp GCCAGGCAGGGAGGGTGCGTGAGCGTGTCGGCGACCTaGGCCGCCTGCGCCTTCCCGCCCAGTCCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ARQGGCVSVSAT*AACAFPPSPSW
Trigger: CCAGCTCGGACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp TTACCTGGTCGCAGAGGCGCGGCCAGGCAGGGAGGGTaGGTGAGCGTGTCGGCGACCTGGGCCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: LPGRRGAARQGG*VSVSATWAACA
Trigger: GGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCCCTGCCTGGCCGCGCCTCTGCGACCAGGTAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512828.1
ENST00000515255.5
CDS GCA 72 bp GGAGGGTGCGTGAGCGTGTCGGCGACCTGGGCCGCCTaGGCCTTCCCGCCCAGTCCGAGCTGGAATTCCAAG +
Preference number: 6 (lower is better)
Translates to: GGCVSVSATWAA*AFPPSPSWNSK
Trigger: CTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCGCAGGCGGCCCAGGTCGCCGACACGCTCACGCACCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp CGCCTTCCCGCCCAGTCCGAGCTGGAATTCCAAGGCTaGCTCTGGGAGCTGCTGCCCGCAGACCACTCGCCT +
Preference number: 6 (lower is better)
Translates to: RLPAQSELEFQG*LWELLPADHSP
Trigger: AGGCGAGTGGTCTGCGGGCAGCAGCTCCCAGAGGCAGCCTTGGAATTCCAGCTCGGACTGGGCGGGAAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS TCA 72 bp CGAAGAAAAGACCAGTTCTTAGGGGGTCGCGGAGGCTaGGAAGCCGGCGGCCCGAGCGCCCTCTTTACCTGG +
Preference number: 6 (lower is better)
Translates to: RRKDQFLGGRGG*EAGGPSALFTW
Trigger: CCAGGTAAAGAGGGCGCTCGGGCCGCCGGCTTCTCAGCCTCCGCGACCCCCTAAGAACTGGTCTTTTCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512828.1
CDS CAA 72 bp GGGCGGGAGAAAAATCAGGACGATGATACCACGCCCTaGTCCTTCCCACCCTTCCCCCGCATCCTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: GREKNQDDDTTP*SFPPFPRILSP
Trigger: AGGGCTGAGGATGCGGGGGAAGGGTGGGAAGGACAAGGGCGTGGTATCATCGTCCTGATTTTTCTCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512828.1
CDS TCA 72 bp GCAGAATTACTTGAACCCGGGAGGCTGGGGTTCCAGTaGGCCGAGACTACACCACTGCATTCCAGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: AELLEPGRLGFQ*AETTPLHSSLS
Trigger: ACTCAGGCTGGAATGCAGTGGTGTAGTCTCGGCTCACTGGAACCCCAGCCTCCCGGGTTCAAGTAATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS CCA 72 bp AGGCTGAAGCAGCAGAATTACTTGAACCCGGGAGGCTaGGGTTCCAGTGAGCCGAGACTACACCACTGCATT +
Preference number: 6 (lower is better)
Translates to: RLKQQNYLNPGG*GSSEPRLHHCI
Trigger: AATGCAGTGGTGTAGTCTCGGCTCACTGGAACCCCAGCCTCCCGGGTTCAAGTAATTCTGCTGCTTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS CCA 72 bp GCACATGCACTGTTTTCCTATGAGCCTTCGTTGGGGTaGGAGCTGGACAGCTGTCTGGTCTGCAAATCTGCA +
Preference number: 6 (lower is better)
Translates to: AHALFSYEPSLG*ELDSCLVCKSA
Trigger: TGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp GAGCACAATATCTGCCAGAGTGAAGTAAAGCCCTTCTaGAAACACATGCTCCAGAGGTGGAAGGTCGGAGGC +
Preference number: 6 (lower is better)
Translates to: EHNICQSEVKPF*KHMLQRWKVGG
Trigger: GCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 72 bp CACTGTTTTCCTATGAGCCTTCGTTGGGGTGGGAGCTaGACAGCTGTCTGGTCTGCAAATCTGCACAGAATC +
Preference number: 6 (lower is better)
Translates to: HCFPMSLRWGGS*TAVWSANLHRI
Trigger: GATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGAAAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 72 bp CACAGACGCCAGGAGAAAAACGACAGCCACCTTATGTaGAAAATACTCGCGCCGGCCGTCATTCATAATCCG +
Preference number: 6 (lower is better)
Translates to: HRRQEKNDSHLM*KILAPAVIHNP
Trigger: CGGATTATGAATGACGGCCGGCGCGAGTATTTTCCACATAAGGTGGCTGTCGTTTTTCTCCTGGCGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000512828.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp GGGCATGTGACGAAGGAAGCCCGTGTTTTGATACAGTaGTCAATCACCATGTCTGTTGCCACTCCACAAGCA +
Preference number: 6 (lower is better)
Translates to: GHVTKEARVLIQ*SITMSVATPQA
Trigger: TGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACACGGGCTTCCTTCGTCACATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CAA 72 bp GTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGTTTATCATCATTATGC +
Preference number: 6 (lower is better)
Translates to: VRGGPTPSAFCC*SFCLRSLSSLC
Trigger: GCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 90 bp TGCCTTTCCCTTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCGGAGTTTATCATCATTATGCACTCT +
Preference number: 6 (lower is better)
Translates to: CLSLSKGRPNSISLL*LELLPAEFIIIMHS
Trigger: AGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAAGGGAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS TCA 72 bp TTGGGAGAGCAGCTCTCTGGCTCCATGGATATCACTTaGACGGAGTATCCACATTCTTCTGCAGCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: LGEQLSGSMDIT*TEYPHSSAALA
Trigger: AGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp ACAGAGCAAGACTCCATCTTCCTTTGGGCTGACTGCTaGAGGGAGAACATTCCAATCAAGAGTCCAAGTAGG +
Preference number: 6 (lower is better)
Translates to: TEQDSIFLWADC*RENIPIKSPSR
Trigger: CCTACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGATGGAGTCTTGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507281.5
CDS CAA 72 bp CTTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTaGCTTGAGCTTCTGCCTGCGGAGTTTATCATCATT +
Preference number: 6 (lower is better)
Translates to: LSKGRPNSISLL*LELLPAEFIII
Trigger: AATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 90 bp TTGGATGAAGAATCCAACCCTTCAGATGTTTCCTGTGTGTGGACCTaGCTCTTTGCCTTTCCCTTAGTAAGGGGAGGCCCAACTCCATCA +
Preference number: 6 (lower is better)
Translates to: LDEESNPSDVSCVWT*LFAFPLVRGGPTPS
Trigger: TGATGGAGTTGGGCCTCCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS GCA 72 bp TTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTTaGTTGAGCTTCTGCCTGCGGAGTTTATCATCATTA +
Preference number: 6 (lower is better)
Translates to: LVRGGPTPSAFC*LSFCLRSLSSL
Trigger: TAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS GCA 72 bp CACTTGAACGGAGTATCCACATTCTTCTGCAGCTCTTaGTCGATCCAGATCCACCAAGCACATGCACTGTTT +
Preference number: 6 (lower is better)
Translates to: HLNGVSTFFCSS*SIQIHQAHALF
Trigger: AAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 72 bp GAAGTAAAGCCCTTCTGCAAACACATGCTCCAGAGGTaGAAGGTCGGAGGCTTTTGCTTTTCTGATGTGAGA +
Preference number: 6 (lower is better)
Translates to: EVKPFCKHMLQR*KVGGFCFSDVR
Trigger: TCTCACATCAGAAAAGCAAAAGCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 72 bp TCACTTGAACGGAGTATCCACATTCTTCTGCAGCTCTaGCTCGATCCAGATCCACCAAGCACATGCACTGTT +
Preference number: 6 (lower is better)
Translates to: SLERSIHILLQL*LDPDPPSTCTV
Trigger: AACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp TTTCCCTTAGTAAGGGGAGGCCCAACTCCATCAGCCTTCTGTTGCTaGAGCTTCTGCCTGCGGAGTTTATCATCATTATGCACTCTAACA +
Preference number: 6 (lower is better)
Translates to: FPLVRGGPTPSAFCC*SFCLRSLSSLCTLT
Trigger: TGTTAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGGAGTTGGGCCTCCCCTTACTAAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 90 bp CATGTTATTTTTGGGAGAGCAGCTCTCTGGCTCCATGGATATCACTaGAACGGAGTATCCACATTCTTCTGCAGCTCTTGCTCGATCCAG +
Preference number: 6 (lower is better)
Translates to: HVIFGRAALWLHGYH*NGVSTFFCSSCSIQ
Trigger: CTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp TCCTGTACTGTGAGCTTTGAGAATGCCACTTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCTTCAGATGTTTCCTGTGTGTGGACC +
Preference number: 6 (lower is better)
Translates to: SCTVSFENATFSSRL*DEESNPSDVSCVWT
Trigger: GGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 90 bp CACCGCTGCAGAAATCCACAATTCTGTCACCAGGTTTGGCCTGATTaGTTACCACATAGACAAGGTTGTTCAACTGTTGCTGCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: HRCRNPQFCHQVWPD*LPHRQGCSTVAASS
Trigger: TGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp CATGGATATCACTTGAACGGAGTATCCACATTCTTCTaGAGCTCTTGCTCGATCCAGATCCACCAAGCACAT +
Preference number: 6 (lower is better)
Translates to: HGYHLNGVSTFF*SSCSIQIHQAH
Trigger: ATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 72 bp GATGAAGAATCCAACCCTTCAGATGTTTCCTGTGTGTaGACCTTGCTCTTTGCCTTTCCCTTAGTAAGGGGA +
Preference number: 6 (lower is better)
Translates to: DEESNPSDVSCV*TLLFAFPLVRG
Trigger: TCCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTGGATTCTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CCA 72 bp CACCGCTGCAGAAATCCACAATTCTGTCACCAGGTTTaGCCTGATTTGTTACCACATAGACAAGGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: HRCRNPQFCHQV*PDLLPHRQGCS
Trigger: TGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp TGCTTGAGCTTCTGCCTGCGGAGTTTATCATCATTATaGACTCTAACAGGCTCACTAAGCTTTTTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: CLSFCLRSLSSL*TLTGSLSFFSS
Trigger: GCTAGAGAAAAAGCTTAGTGAGCCTGTTAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS GCA 72 bp CCGTGTTTTGATACAGTGCTCAATCACCATGTCTGTTaGCACTCCACAAGCATGCAATGCTACTCCAATATT +
Preference number: 6 (lower is better)
Translates to: PCFDTVLNHHVC*HSTSMQCYSNI
Trigger: AATATTGGAGTAGCATTGCATGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000515255.5
ENST00000515279.6
CDS CCA 72 bp TCTGATCGTTCTACTACTGCAGGCAAACAGCAATTTTaGACTATTGGTGGGAGCTCCTGCCTTGAAATAATC +
Preference number: 6 (lower is better)
Translates to: SDRSTTAGKQQF*TIGGSSCLEII
Trigger: GATTATTTCAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCTGCAGTAGTAGAACGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000484843.1
ENST00000509336.5
ENST00000510865.5
ENST00000515279.6
CDS CCA 72 bp AGAACATTCCAATCAAGAGTCCAAGTAGGGCAAGGGTaGGGAGAAAACATCACTTCAATGCCCTTTTCCATT +
Preference number: 6 (lower is better)
Translates to: RTFQSRVQVGQG*GENITSMPFSI
Trigger: AATGGAAAAGGGCATTGAAGTGATGTTTTCTCCCCACCCTTGCCCTACTTGGACTCTTGATTGGAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CAA 72 bp GTGAGCTTTGAGAATGCCACTTTCAGTTCCAGACTCTaGGATGAAGAATCCAACCCTTCAGATGTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: VSFENATFSSRL*DEESNPSDVSC
Trigger: ACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAAAGTGGCATTCTCAAAGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000515279.6
CDS CAA 72 bp CGCTTTGCTCTTCTACACCTGGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGGTTGTCAACAACTTTG +
Preference number: 6 (lower is better)
Translates to: RFALLHLGLHIS*DAVQLRLSTTL
Trigger: CAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp GCTCTTCTACACCTGGGACTTCACATAAGTTTGGATGCTGTTCAGTaGAGGTTGTCAACAACTTTGGTAAATGGAGAAATTGGATCCCAC +
Preference number: 6 (lower is better)
Translates to: ALLHLGLHISLDAVQ*RLSTTLVNGEIGSH
Trigger: GTGGGATCCAATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp AGGTTTGGCCTGATTTGTTACCACATAGACAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCGATCACTGGACATTTTACCTTCCTT +
Preference number: 6 (lower is better)
Translates to: RFGLICYHIDKVVQL*LLPQSSITGHFTFL
Trigger: AAGGAAGGTAAAATGTCCAGTGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp TGCTCTTCTACACCTGGGACTTCACATAAGTTTGGATaGTGTTCAGTTGAGGTTGTCAACAACTTTGGTAAA +
Preference number: 6 (lower is better)
Translates to: CSSTPGTSHKFG*CSVEVVNNFGK
Trigger: TTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CAA 72 bp TGTCTCAATACAACAGCAAGTCCTGCTCTACAAAAATaGTCTGATCGTTCTACTACTGCAGGCAAACAGCAA +
Preference number: 6 (lower is better)
Translates to: CLNTTASPALQK*SDRSTTAGKQQ
Trigger: TTGCTGTTTGCCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000484843.1
ENST00000509336.5
ENST00000510865.5
ENST00000515279.6
CDS CAA 72 bp CTGATTTGTTACCACATAGACAAGGTTGTTCAACTGTaGCTGCTTCCTCAAAGCTCGATCACTGGACATTTT +
Preference number: 6 (lower is better)
Translates to: LICYHIDKVVQL*LLPQSSITGHF
Trigger: AAAATGTCCAGTGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000515255.5
ENST00000515279.6
CDS CAA 72 bp AGAAATCCACAATTCTGTCACCAGGTTTGGCCTGATTaGTTACCACATAGACAAGGTTGTTCAACTGTTGCT +
Preference number: 6 (lower is better)
Translates to: RNPQFCHQVWPD*LPHRQGCSTVA
Trigger: AGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCAGGCCAAACCTGGTGACAGAATTGTGGATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp ATAAAGGATCGCTTTGCTCTTCTACACCTGGGACTTCACATAAGTTaGGATGCTGTTCAGTTGAGGTTGTCAACAACTTTGGTAAATGGA +
Preference number: 6 (lower is better)
Translates to: IKDRFALLHLGLHIS*DAVQLRLSTTLVNG
Trigger: TCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCGATCCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS CAA 90 bp TGGATTATGTGTCTCAATACAACAGCAAGTCCTGCTCTACAAAAATaGTCTGATCGTTCTACTACTGCAGGCAAACAGCAATTTTGGACT +
Preference number: 6 (lower is better)
Translates to: WIMCLNTTASPALQK*SDRSTTAGKQQFWT
Trigger: AGTCCAAAATTGCTGTTTGCCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTGAGACACATAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000484843.1
ENST00000509336.5
ENST00000510865.5
ENST00000515279.6
CDS TCA 72 bp CAATACAACAGCAAGTCCTGCTCTACAAAAATTGTCTaGTCGTTCTACTACTGCAGGCAAACAGCAATTTTG +
Preference number: 6 (lower is better)
Translates to: QYNSKSCSTKIV*SFYYCRQTAIL
Trigger: CAAAATTGCTGTTTGCCTGCAGTAGTAGAACGATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000484843.1
ENST00000509336.5
ENST00000510865.5
ENST00000515279.6
CDS TCA 72 bp ATTTCCTTTTATCTCTTATTCTGGCTTTACCTGACATaGTGGCAGCATGTGAGCAAGGACAATTCCAACATG +
Preference number: 6 (lower is better)
Translates to: ISFYLLFWLYLT*WQHVSKDNSNM
Trigger: CATGTTGGAATTGTCCTTGCTCACATGCTGCCATCATGTCAGGTAAAGCCAGAATAAGAGATAAAAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484843.1
CDS CAA 72 bp GGACTTCACATAAGTTTGGATGCTGTTCAGTTGAGGTaGTCAACAACTTTGGTAAATGGAGAAATTGGATCC +
Preference number: 6 (lower is better)
Translates to: GLHISLDAVQLR*STTLVNGEIGS
Trigger: GGATCCAATTTCTCCATTTACCAAAGTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000507281.5
ENST00000515255.5
ENST00000515279.6
CDS GCA 72 bp ACAGAAATAAAGTTACAGATGTATGAAGAGGAAAGATaGATCCTTCTGTTTGGTGAGAAAAGTCCAGGTACA +
Preference number: 6 (lower is better)
Translates to: TEIKLQMYEEER*ILLFGEKSPGT
Trigger: TGTACCTGGACTTTTCTCACCAAACAGAAGGATGCATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360505.9
ENST00000394728.4
ENST00000394730.7
ENST00000484843.1
ENST00000503409.1
ENST00000507281.5
ENST00000509336.5
ENST00000510865.5
ENST00000512828.1
ENST00000515279.6