Pregenerated sensors for GSTA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000170899Ensembl transcript IDs: ENST00000370959.1, ENST00000370960.5, ENST00000370963.9, ENST00000457564.1, ENST00000477599.5, ENST00000486559.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGAGAACAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTaGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACC | + |
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Preference number: 1 (lower is better) Translates to: RREQEILPILIMRMN*LQDMSSPIRSNLNT Trigger: GGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTGTTCTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| 3UTR CCA 72 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTaGCTACAGGACATGAGTAGCCCAATCAGATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: QEILPILIMRMN*LQDMSSPIRSN Trigger: GTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCGCTTTTCAGGCTTTCTaGAGTCCACTCGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSAFQAF*SPLGGL Trigger: CAGGCCTCCGAGTGGACTCCAGAAAGCCTGAAAAGC...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCGAGCTTGGGCCTTGCTaGCATGATAGCTTTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSELGPC*HDSFSG Trigger: GCCTGAAAAGCTATCATGGCAGCAAGGCCCAAGCTC...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTTCCGGCCTCTTCCGTTaGGATAGTGGAGCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLEEMISLTQKTQLRTQLSGLFR*DSGAWA Trigger: GGCCCAAGCTCCACTATCCCAACGGAAGAGGCCGGA...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCACCATGGGCACTTGTTaGAACAGCAGGTGGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSTMGTC*NSRWLP Trigger: TGGTAACCACCTGCTGTTCCAACAAGTGCCCATGGT...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR TCA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCACTGGCTACAGGACATaGGTAGCCCAATCAGATCTA | + |
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Preference number: 4 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSTGYRT*VAQSDL Trigger: TAGATCTGATTGGGCTACTCATGTCCTGTAGCCAGT...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTGGCTACAGGACATGAGTGAGGCTTCTTCTTGCTaGCAGGTTCAAGGAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEILPILIMRMNWLQDMSEASSC*QVQGIS Trigger: AGAGATTCCTTGAACCTGGCAGCAAGAAGAAGCCTC...ACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTGGGGAGGCTTCTTCTTaGTGCCAGGTTCAAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: FLEEMISLTQKTQLRTQLGEASS*CQVQGI Trigger: GATTCCTTGAACCTGGCAGCAAGAAGAAGCCTCCCC...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTCCGGCCTCTTCCGTTaGGATAGTGGAGCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTSGLFR*DSGAWA Trigger: GGCCCAAGCTCCACTATCCCAACGGAAGAGGCCGGA...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTGAGGCTTCTTCTTGCTaGCAGGTTCAAGGAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLEEMISLTQKTQLRTQLEASSC*QVQGIS Trigger: AGAGATTCCTTGAACCTGGCAGCAAGAAGAAGCCTC...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTGGCTACAGGACATGAGTTTCACTGTGTATTCCTaGAGGAAAGGAAATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QEILPILIMRMNWLQDMSFTVYS*RKGNAD Trigger: GTCTGCATTTCCTTTCCTCCAGGAATACACAGTGAA...ACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTGGCTACAGGACATGAGTACTGTCACTCACACATaGATGTGTTGTTTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEILPILIMRMNWLQDMSTVTHT*MCCFMA Trigger: GGCCATAAAACAACACATCCATGTGTGAGTGACAGT...ACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR TCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAATCAGGGTTCTCTCCTTaGGGTTCTTGCCAAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQSGFSP*GSCQRD Trigger: ATCTCTTTGGCAAGAACCTCAAGGAGAGAACCCTGA...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTGAGCTTGGGCCTTGCTaGCATGATAGCTTTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTELGPC*HDSFSG Trigger: GCCTGAAAAGCTATCATGGCAGCAAGGCCCAAGCTC...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTGGGGAGGCTTCTTCTTaGTGCCAGGTTCAAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTGEASS*CQVQGI Trigger: GATTCCTTGAACCTGGCAGCAAGAAGAAGCCTCCCC...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCGGATGTGTTGTTTTATaGCCTAAAGATGTTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSGCVVL*PKDVVD Trigger: GTCTACAACATCTTTAGGCCATAAAACAACACATCC...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR TCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAATGCTCAGGGGCGAAATaGATATTCAGGATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQCSGAK*IFRILA Trigger: TGCCAAAATCCTGAATATTCATTTCGCCCCTGAGCA...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370960.5 |
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| CDS-3UTR CCA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTACTGTCACTCACACATaGATGTGTTGTTTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLEEMISLTQKTQLRTQLTVTHT*MCCFMA Trigger: GGCCATAAAACAACACATCCATGTGTGAGTGACAGT...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTATTATGAGGATGAACTaGCTACAGGACATGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLEEMISLTQKTQLRTQLIMRMN*LQDMSS Trigger: GCTACTCATGTCCTGTAGCCAGTTCATCCTCATAAT...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAAGAGATTGTGCTTGTCTaGTATGTAGTGGAGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQEIVLV*YVVENA Trigger: AGCATTCTCCACTACATAGCAGACAAGCACAATCTC...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTGTTGGAACAGCAGGTaGTTACCATCCTGCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTCWNSR*LPSCNL Trigger: CAAGTTGCAGGATGGTAACCACCTGCTGTTCCAACA...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTAATTATAGCCTTCTaGGCCATGTTAACCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQLIIAF*AMLTTS Trigger: GGAAGTGGTTAACATGGCCCAGAAGGCTATAATTAG...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAATTCACTGTGTATTCCTaGAGGAAAGGAAATGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQFTVYS*RKGNAD Trigger: GTCTGCATTTCCTTTCCTCCAGGAATACACAGTGAA...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTTTCTGAAATACAAATaGAGCAGCTCGTCGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTFLKYK*SSSSQT Trigger: GGTCTGCGACGAGCTGCTGCATTTGTATTTCAGAAA...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370960.5 |
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| CDS-3UTR TCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAAACCACTTCCTTTTGCTaGTCATCTGGTTTTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQTTSFC*SSGFKK Trigger: TTTCTTAAAACCAGATGATCAGCAAAAGGAAGTGGT...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTAGGTGGTTACCATCCTaGAACTTGTACAACTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTRWLPS*NLYNCS Trigger: AGAACAGTTGTACAAGTTGCAGGATGGTAACCACCT...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAAGGATGTGTTGTTTTATaGCCTAAAGATGTTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQGCVVL*PKDVVD Trigger: GTCTACAACATCTTTAGGCCATAAAACAACACATCC...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CCA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAAGAATATTCAGGATTTTaGCACGGGAAACTGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: IFLEEMISLTQKTQLRTQEYSGF*HGKLFF Trigger: AAAGAACAGTTTCCCGTGCCAAAATCCTGAATATTC...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370960.5 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTGGTTTTAAGAAAGGATaGATGATAAGCAGTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTGFKKG*MISSSS Trigger: GCTGGAACTGCTTATCATGCATCCTTTCTTAAAACC...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR TCA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTACCACTTCCTTTTGCTaGTCATCTGGTTTTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KKVDISRRDDLVDTKDPTTTSFC*SSGFKK Trigger: TTTCTTAAAACCAGATGATCAGCAAAAGGAAGTGGT...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCGGGGGAGGCTTCTTCTaGCTGCCAGGTTCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSGGGFF*LPGSRN Trigger: ATTCCTTGAACCTGGCAGCAAGAAGAAGCCTCCCCC...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCCTCTCCTTGAGGTTCTaGCCAAAGAGATTGTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSLSLRF*PKRLCL Trigger: CAAGCACAATCTCTTTGGCAAGAACCTCAAGGAGAG...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTGGGGGAGGCTTCTTCTaGCTGCCAGGTTCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: FLEEMISLTQKTQLRTQLGGGFF*LPGSRN Trigger: ATTCCTTGAACCTGGCAGCAAGAAGAAGCCTCCCCC...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTGGCTACAGGACATGAGTATCAGGGTTCTCTCCTaGAGGTTCTTGCCAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QEILPILIMRMNWLQDMSIRVLS*RFLPKR Trigger: TCTCTTTGGCAAGAACCTCAAGGAGAGAACCCTGAT...ACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAATTCAACCATGGGCACTaGTTGGAACAGCAGGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: IFLEEMISLTQKTQLRTQFNHGH*LEQQVV Trigger: AACCACCTGCTGTTCCAACAAGTGCCCATGGTTGAA...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | TGGCTACAGGACATGAGTAGCCCAATCAGATCTAACTTAAATACCAGCCTCTCCTCACACATGGATGTGTaGTTTTATGGCCTAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: WLQDMSSPIRSNLNTSLSSHMDV*FYGLKM Trigger: CATCTTTAGGCCATAAAACAACACATCCATGTGTGA...GGAGAGGCTGGTATTTAAGTTAGATCTGATTGGGCTACTCATGTCCTGTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTAACCATGGGCACTTGTaGGAACAGCAGGTGGTTACC | + |
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Preference number: 5 (lower is better) Translates to: KKVDISRRDDLVDTKDPTNHGHL*EQQVVT Trigger: GGTAACCACCTGCTGTTCCAACAAGTGCCCATGGTT...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | CAAGAGATCCTGCCCATTCTTATTATGAGGATGAACTGGCTACAGGACATGAGTTTACCATCCTGCAACTaGTACAACTGTTCTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: QEILPILIMRMNWLQDMSLPSCN*YNCSFV Trigger: AACAAAAGAACAGTTGTACAAGTTGCAGGATGGTAA...ACTCATGTCCTGTAGCCAGTTCATCCTCATAATAAGAATGGGCAGGATCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370963.9 |
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| CDS CCA 90 bp | ATCTCTAGGAACACACTGTCACTCACACATGGATGTGTTGTTTTATaGCCTAAAGATGTTGTAGACGGTTCTCACATAAATTTCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: ISRNTLSLTHGCVVL*PKDVVDGSHINFIR Trigger: CCTGATGAAATTTATGTGAGAACCGTCTACAACATCTTTAGGCCATAAAACAACACATCCATGTGTGAGTGACAGTGTGTTCCTAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000370960.5 ENST00000370963.9 ENST00000477599.5 ENST00000486559.5 |
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| CDS-3UTR CAA 90 bp | TTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAACTTTCACACATGGATGTGTaGTTTTATGGCCTAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: FLEEMISLTQKTQLRTQLSHMDV*FYGLKM Trigger: CATCTTTAGGCCATAAAACAACACATCCATGTGTGA...AAGTTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | ATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTTAGGACCCAAGAAGAGATGATCTCGTaGACACAAAAGACCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: IFLEEMISLTQKTQLRTQEEMIS*TQKTQL Trigger: AAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTC...TTGGGTCCTAAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGGTTGATATTTCTAGAAGAGATGATCTCGTTGACACAAAAGACCCAACTGAAGAGATGATCTCGTaGACACAAAAGACCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: KKVDISRRDDLVDTKDPTEEMIS*TQKTQL Trigger: AAGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTC...AGTTGGGTCTTTTGTGTCAACGAGATCATCTCTTCTAGAAATATCAACCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370960.5 ENST00000370963.9 |
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| CDS TCA 72 bp | TCCCCTCCACGTACATGTCAATCAGGGTTCTCTCCTTaGGGTTCTTGCCAAAGAGATTGTGCTTGTCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SPPRTCQSGFSP*GSCQRDCACLL Trigger: TAGCAGACAAGCACAATCTCTTTGGCAAGAACCTCAAGGAGAGAACCCTGATTGACATGTACGTGGAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370959.1 ENST00000370963.9 ENST00000486559.5 |
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| CDS TCA 72 bp | AATTTCGCGTCTTCAACCCAGTGCTCAGGGGCGAAATaGATATTCAGGATTTTGGCACGGGAAACTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NFASSTQCSGAK*IFRILARETVL Trigger: AAGAACAGTTTCCCGTGCCAAAATCCTGAATATTCATTTCGCCCCTGAGCACTGGGTTGAAGACGCGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370960.5 |
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| CDS TCA 72 bp | ATAGCCTTCTGGGCCATGTTAACCACTTCCTTTTGCTaGTCATCTGGTTTTAAGAAAGGATGCATGATAAGC | + |
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Preference number: 6 (lower is better) Translates to: IAFWAMLTTSFC*SSGFKKGCMIS Trigger: GCTTATCATGCATCCTTTCTTAAAACCAGATGATCAGCAAAAGGAAGTGGTTAACATGGCCCAGAAGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000370959.1 ENST00000370960.5 ENST00000370963.9 ENST00000457564.1 ENST00000477599.5 ENST00000486559.5 |
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| CDS CCA 72 bp | AACACACTGTCACTCACACATGGATGTGTTGTTTTATaGCCTAAAGATGTTGTAGACGGTTCTCACATAAAT | + |
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Preference number: 6 (lower is better) Translates to: NTLSLTHGCVVL*PKDVVDGSHIN Trigger: ATTTATGTGAGAACCGTCTACAACATCTTTAGGCCATAAAACAACACATCCATGTGTGAGTGACAGTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000370960.5 ENST00000370963.9 ENST00000477599.5 ENST00000486559.5 |
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| CDS CAA 72 bp | TTTGAGGTGGGTGATGGATATCCTAATTACCCTGATTaGATCACTACACATGATACACATGTATCAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: FEVGDGYPNYPD*ITTHDTHVSKY Trigger: ATATTTTGATACATGTGTATCATGTGTAGTGATCAAATCAGGGTAATTAGGATATCCATCACCCACCTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486559.5 |
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