RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSS (Homo sapiens)

Ensembl gene IDs: ENSG00000100983

Ensembl transcript IDs: ENST00000451957.2, ENST00000642493.1, ENST00000642498.1, ENST00000642538.1, ENST00000643188.1, ENST00000643203.1, ENST00000643271.1, ENST00000643443.1, ENST00000643502.1, ENST00000643628.1, ENST00000643690.1, ENST00000643908.1, ENST00000644197.1, ENST00000644538.1, ENST00000644608.1, ENST00000644694.1, ENST00000644793.1, ENST00000645102.1, ENST00000645328.1, ENST00000645408.1, ENST00000645723.1, ENST00000646405.1, ENST00000646497.1, ENST00000646502.1, ENST00000646512.1, ENST00000646735.1, ENST00000646766.1, ENST00000651619.1

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTaGACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: PGSNISSMPGLLSSC*TFLVPASWVAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR GCA 90 bp TGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGG +
Preference number: 1 (lower is better)
Translates to: WPGSNISSMPGLLSS*CTFLVPASWVAMSG
Trigger: CCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR CCA 90 bp GAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCACTCCCGCTGCCACACCACCATCTGC +
Preference number: 1 (lower is better)
Translates to: EDRRSRGLVVPSHRV*VVQDCHSRCHTTIC
Trigger: GCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 90 bp CGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTT +
Preference number: 1 (lower is better)
Translates to: RGLVVPSHRVWVVQD*HSRCHTTICMLDGF
Trigger: AAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 90 bp GGGTTGTCCAGGACTGCCACTCCCGCTGCCACACCACCATCTGCATaGTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTC +
Preference number: 1 (lower is better)
Translates to: GLSRTATPAATPPSA*SMALVRSRCPTCLF
Trigger: GAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR TCA 90 bp TTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAACACAGTCTGGGCAATGCCCTCTTT +
Preference number: 1 (lower is better)
Translates to: FQGWGAICAALEHVV*AIQAQEHSLGNALF
Trigger: AAAGAGGGCATTGCCCAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR CCA 90 bp CCAGGACTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGA +
Preference number: 1 (lower is better)
Translates to: PGLPLPLPHHHLHAR*LWFEVDAPRACSSR
Trigger: TCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR GCA 90 bp CAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCT +
Preference number: 1 (lower is better)
Translates to: QRCPALKCTGPLGQG*QAVAGNSQKAQVRS
Trigger: AGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR CCA 90 bp CTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCT +
Preference number: 1 (lower is better)
Translates to: LPLPLPHHHLHARWL*FEVDAPRACSSRVS
Trigger: AGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR CCA 90 bp GGGACACACATCACCTGGACTCAGCCCCAAACCCAGGACCTTCCCTaGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAAGAAA +
Preference number: 1 (lower is better)
Translates to: GTHITWTQPQTQDLP*TQLSSTWVTVYTKK
Trigger: TTTCTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGGGTTTGGGGCTGAGTCCAGGTGATGTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR TCA 90 bp TGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCT +
Preference number: 1 (lower is better)
Translates to: WRSLGGYPSGGLGEE*QIQRIEGPVAWLCP
Trigger: AGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 90 bp GCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCCTGACA +
Preference number: 1 (lower is better)
Translates to: ATPPSACSMALVRSR*PTCLFITSVFSCLT
Trigger: TGTCAGGCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR GCA 90 bp TGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTaGAAAGGACTTCTCATCAGGGCTTCATCTGATACCCTGGTAAGG +
Preference number: 1 (lower is better)
Translates to: CVLSPLGAIWSFLHG*KGLLIRASSDTLVR
Trigger: CCTTACCAGGGTATCAGATGAAGCCCTGATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR TCA 90 bp TCTCTGGAGTCTCCTTCTAGTCCTAGGTTGTCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAG +
Preference number: 1 (lower is better)
Translates to: SLESPSSPRLSNHVF*VLLVLFGVSFTVAK
Trigger: CTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGACTAGAAGGAGACTCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR GCA 90 bp CTTCTAGTCCTAGGTTGTCAAACCATGTGTTCTGAGTCCTCTTGGTaGTATTTGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCATCAG +
Preference number: 1 (lower is better)
Translates to: LLVLGCQTMCSESSW*YLEFPSRLQRTSHQ
Trigger: CTGATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGACTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CCA 90 bp TTAATAGATAAAGAAACAGGTAATAAAGCTAGTGATTGGCAGAGCTaGCACCGAAGCCCAGGATTCCTGACTCTTTCCAGTGTTCCCCTC +
Preference number: 1 (lower is better)
Translates to: LIDKETGNKASDWQS*HRSPGFLTLSSVPL
Trigger: GAGGGGAACACTGGAAAGAGTCAGGAATCCTGGGCTTCGGTGCCAGCTCTGCCAATCACTAGCTTTATTACCTGTTTCTTTATCTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CCA 90 bp CTCCTTCTAGTCCTAGGTTGTCAAACCATGTGTTCTGAGTCCTCTTaGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCAT +
Preference number: 1 (lower is better)
Translates to: LLLVLGCQTMCSESS*CYLEFPSRLQRTSH
Trigger: ATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGACTAGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CCA 90 bp TGGCCTCATTTAATAGATAAAGAAACAGGTAATAAAGCTAGTGATTaGCAGAGCTGGCACCGAAGCCCAGGATTCCTGACTCTTTCCAGT +
Preference number: 1 (lower is better)
Translates to: WPHLIDKETGNKASD*QSWHRSPGFLTLSS
Trigger: ACTGGAAAGAGTCAGGAATCCTGGGCTTCGGTGCCAGCTCTGCCAATCACTAGCTTTATTACCTGTTTCTTTATCTATTAAATGAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR CCA 90 bp CACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: HPHPVSRGQQRWRGGGPQSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CCACTCGGGCAGGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLGQGCQAVAGNSQKAQVMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...AACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR-3UTR CCA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp GACACTGAGAACATGTCGGTGCACAGCTGGGGTCCGGGAGGCCAGGCCCCCAAAGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: DTENMSVHSWGPGGQAPKGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...TTTGGGGGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 2 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR CAA 90 bp ATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCCGCTGCCACACCACCATCTGCATGC +
Preference number: 2 (lower is better)
Translates to: IEGPVAWLCPHTGYG*SRTATPAATPPSAC
Trigger: GCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR TCA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR-3UTR GCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 2 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 2 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR-3UTR GCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 2 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCAGCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LHLLSPSQLGGNVWALGSGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...GCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 2 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR-3UTR GCA 90 bp CCTTCTCTTGAGCAATCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: PSLEQSVAPEHWVSRRAPLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGATTGCTCAAGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp CATGTAGCCATCCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: HVAIPEVNHSNFLAIHKQRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...CTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCTACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp CAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: QAILKRLRFDLLHEDVGGRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...GCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR CAA 90 bp ACTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTC +
Preference number: 2 (lower is better)
Translates to: TATPAATPPSACSMA*VRSRCPTCLFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR CAA 90 bp TGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTC +
Preference number: 2 (lower is better)
Translates to: CTFLVPASWVAMSGH*AACDLSSSRRASQF
Trigger: GAATTGGGAAGCACGTCTACTGCTGGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp TCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTGAGCGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: SVSGLGSHLRCAGTCSLSVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...GCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp AATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 2 (lower is better)
Translates to: NFLAIHKQPSVLVQRPLFATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp CAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: QQFPGHPQTAFGLGPETPRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...AGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
3UTR CAA 90 bp TGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTA +
Preference number: 2 (lower is better)
Translates to: CTFLVPASWVAMSGH*AACDLSSSRRASQL
Trigger: TAATTGGGAAGCACGTCTACTGCTGGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 2 (lower is better)
Translates to: LPLPLPHHHLHARWLWFESRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...TTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCAGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 2 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAACCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: PQTAFGLGPETPFQRYLQPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...TTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
3UTR-3UTR GCA 90 bp GCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: AVSGPVPFPPHIGCYLHPGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...AGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR-3UTR CCA 90 bp AAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 2 (lower is better)
Translates to: KRLRFDLLHEDVGGPLLTPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...AGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp AGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCACCTTCTTAGTCAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: SNISSMPGLLSSCCTFLVNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...GACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 2 (lower is better)
Translates to: PHLKDLGASRSHLRETQLATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR-3UTR CCA 90 bp TCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: SACSMALVRSRCPTCLFIVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...GATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCATTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 2 (lower is better)
Translates to: PEHWVSRRAPRLWQFPGPFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...TGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR-3UTR TCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 2 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: SLSFSCFRACTISSPYRLATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCGTCTCTATGCCTCTCTaGAGTCTCCTTCTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: PLPHHHLHARWLWFEVDAVSMPL*SLLLVL
Trigger: TAGGACTAGAAGGAGACTCCAGAGAGGCATAGAGAC...GGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR CCA 90 bp CAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: QRIEGPVAWLCPHTGYGLHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...CAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 2 (lower is better)
Translates to: RRAPRLWQFPGPVPCWDYTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...ATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: FSEISSNVRRITWMFLASMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR CAA 90 bp GCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTGAGAACATGTCGGTGCACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ASPLLGLLERILPAS*VLLRTLRTCRCTAG
Trigger: CCCAGCTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR TCA 90 bp ACAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTACAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 2 (lower is better)
Translates to: TNTEDRRSRGLVVPSHRVQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...TACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR TCA 90 bp GCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: ALAIPRASPLLGLLERILLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...CAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp CCAGGACCTTCCCTGGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAACCTCTTGGTGCTATTTaGAGTTTCCTTCACGGTTGC +
Preference number: 2 (lower is better)
Translates to: PGPSLDPAEQYLGNCLYQPLGAI*SFLHGC
Trigger: GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGG...TTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 2 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp GAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: EMVLISICFRAGEPSALRSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp GTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTGGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: VTSPAVDVLPNYKQPSVLVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...CAAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: PFSEISSNVRRITWMFLASQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 2 (lower is better)
Translates to: LAGIIREDLASFFGLTQDDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...GTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp GGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTCCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 2 (lower is better)
Translates to: GFGNSQGQSLAGIIREDLPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...AAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR CAA 90 bp GCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCGG +
Preference number: 2 (lower is better)
Translates to: AIPRASPLLGLLERI*PASLVLLRTLRTCR
Trigger: CCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR TCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 2 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR TCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 2 (lower is better)
Translates to: RAAYPELYPHLKDLGASRQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR TCA 90 bp CCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: PGFGNSQGQSLAGIIREDWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...ATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR GCA 90 bp AATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 2 (lower is better)
Translates to: NFLAIHKQPSVLVQRPLFTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR-3UTR GCA 90 bp TCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: SLAGIIREDLASFFGLTQGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...CTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGGTCTCTATGCCTCTCTaGAGTCTCCTTCTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMVSMPL*SLLLVL
Trigger: TAGGACTAGAAGGAGACTCCAGAGAGGCATAGAGAC...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 2 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 2 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp CCTTCTCTTGAGCAATCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: PSLEQSVAPEHWVSRRAPSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGATTGCTCAAGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp AGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: SSQALAIPRASPLLGLLESHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp TGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: CSWPVAHSLWHAGQICFFSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...AAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp CTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: LAGIIREDLASFFGLTQDRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...GTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR TCA 90 bp TGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: CPSAVSGPVPFPPHIGCYFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...GTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 2 (lower is better)
Translates to: PELYPHLKDLGASRSHLRSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: PHLKDLGASRSHLRETQLCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGACCCAGGACCTTCCCTaGACCCAGCTGAGCAGTACC +
Preference number: 2 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLTQDLP*TQLSST
Trigger: GGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGGGT...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR CCA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAACCCAGGACCTTCCCTaGACCCAGCTGAGCAGTACC +
Preference number: 2 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVTQDLP*TQLSST
Trigger: GGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGGGT...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR CCA 90 bp ACAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTACATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: TNTEDRRSRGLVVPSHRVHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...TACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 2 (lower is better)
Translates to: RAAYPELYPHLKDLGASRHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRASQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp ACCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: TPFQRYLQMFVGSHGCSWRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...CCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp TGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCTTCTGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: WPVAHSLWHAGQICFFPSVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...AGAAGGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR CAA 90 bp TACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: YLRAAYPELYPHLKD*GASRSHLRETQLFW
Trigger: CCAGAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR GCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 2 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000646405.1
3UTR-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp TCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCATCAGGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: SSWCYLEFPSRLQRTSHQVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...CTGATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR CCA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: FSEISSNVRRITWMFLASVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp CTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCGGTGCACAGCTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 2 (lower is better)
Translates to: LASFFGLTQDTENMSVHSFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...GCTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp GGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGCCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 2 (lower is better)
Translates to: GIIREDLASFFGLTQDTEPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...CTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR CAA 90 bp GTCCTAGGTTGTCAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTaGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCATCAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: VLGCQTMCSESSWCY*EFPSRLQRTSHQGF
Trigger: GAAGCCCTGATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR TCA 90 bp CCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTTCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTT +
Preference number: 2 (lower is better)
Translates to: PGSKPQQFPGHPQTAFGLSNHVF*VLLVLF
Trigger: AAATAGCACCAAGAGGACTCAGAACACATGGTTTGA...AAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR TCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 2 (lower is better)
Translates to: PELYPHLKDLGASRSHLRGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR TCA 90 bp CCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 2 (lower is better)
Translates to: PLFRDIFKCSSDHMDVPGSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...GCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR GCA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: FSEISSNVRRITWMFLASGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp GTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: VTSPAVDVLPNYKQPSVLPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...CAAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642493.1
3UTR-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCCTCTTGGTGCTATTTaGAGTTTCCTTCACGGTTGC +
Preference number: 2 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIPLGAI*SFLHGC
Trigger: GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR CCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTACAGCTGAGCAGTACCTaGGTAACTGTCTATACCAAG +
Preference number: 2 (lower is better)
Translates to: YPELYPHLKDLGASRSHLQLSST*VTVYTK
Trigger: CTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTG...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTCCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 2 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR-3UTR CCA 90 bp CTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: LGLLERILPASLVLLRTLNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp GATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 2 (lower is better)
Translates to: DLLHEDVGGPLLTVLQLFVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...AAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR TCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGTCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTT +
Preference number: 2 (lower is better)
Translates to: ELYPHLKDLGASRSHLRESNHVF*VLLVLF
Trigger: AAATAGCACCAAGAGGACTCAGAACACATGGTTTGA...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR TCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: PFSEISSNVRRITWMFLAWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR GCA 90 bp CTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 2 (lower is better)
Translates to: LAGIIREDLASFFGLTQDTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...GTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CCA 90 bp GATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: DLLHEDVGGPLLTVLQLFFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...AAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR GCA 90 bp GTTCATCACGAGTGTCTTTTCCTGCCTATAGAAATGGAGGCAGGGGACACACATTCTGAGTCCTCTTGGTaGTATTTGGAGTTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: VHHECLFLPIEMEAGDTHSESSW*YLEFPS
Trigger: TGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGA...ATGTGTGTCCCCTGCCTCCATTTCTATAGGCAGGAAAAGACACTCGTGATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR-3UTR GCA 90 bp ATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATTCACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 2 (lower is better)
Translates to: ISSNVRRITWMFLASSSFTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...GAATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR-3UTR CCA 90 bp ATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCGGTGCACAGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 2 (lower is better)
Translates to: ILPASLVLLRTLRTCRCTVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...TGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp ACCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: TPFQRYLQMFVGSHGCSWSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp TGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCTTCTTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 2 (lower is better)
Translates to: WPVAHSLWHAGQICFFPSSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...AGAAGGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: PFSEISSNVRRITWMFLAFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CCA 90 bp CTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: LFRDIFKCSSDHMDVPGQFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...CTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR CCA 72 bp AGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCACTCCCGCTGCCACACC +
Preference number: 3 (lower is better)
Translates to: RSRGLVVPSHRV*VVQDCHSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 3 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp GCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCACCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: AGQGATSPACPACLAPAAPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...TGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR GCA 72 bp GTTGTGCCCTCACACAGGGTATGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACCACCATCTGCATGCTC +
Preference number: 3 (lower is better)
Translates to: VVPSHRVWVVQD*HSRCHTTICML
Trigger: GAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 72 bp AGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: SNISSMPGLLSS*CTFLVPASWVA
Trigger: TGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp CCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: PEHWVSRRAPRLWQFPGPAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...TGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp CTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCAGCGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: LHLLSPSQLGGNVWALGSAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...GCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR GCA 72 bp AGGACTGCCACTCCCGCTGCCACACCACCATCTGCATaGTCGATGGCTTTGGTTCGAAGTAGATGCCCCACG +
Preference number: 3 (lower is better)
Translates to: RTATPAATPPSA*SMALVRSRCPT
Trigger: CGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 72 bp CCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: PALKCTGPLGQG*QAVAGNSQKAQ
Trigger: CTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp AGGACTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 3 (lower is better)
Translates to: RTATPAATPPSACSMALVACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...AACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp GGCCAGGCCCCCAAAGCTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: GQAPKAGRDGVDFDLFQGPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...GCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAGCTTTGGGGGCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR TCA 72 bp TGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAACACAGTCTGGGCAAT +
Preference number: 3 (lower is better)
Translates to: WGAICAALEHVV*AIQAQEHSLGN
Trigger: ATTGCCCAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR CCA 72 bp CCACTCCCGCTGCCACACCACCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGT +
Preference number: 3 (lower is better)
Translates to: PLPLPHHHLHAR*LWFEVDAPRAC
Trigger: ACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
3UTR CCA 72 bp CCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: PEHWVSRRAPRL*QFPGPVPCWDY
Trigger: ATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp ACAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTACACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 3 (lower is better)
Translates to: TNTEDRRSRGLVVPSHRVHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...TACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: SQALEPAEKADEGLTGVGKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR-3UTR CAA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
3UTR GCA 72 bp CAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGGTTGTCCAGGACTGCC +
Preference number: 3 (lower is better)
Translates to: QIQRIEGPVAWL*PHTGYGLSRTA
Trigger: GGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
3UTR GCA 72 bp TTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTGAGCGATTCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: FRSVSGLGSHLR*AGTCSLSDSGP
Trigger: TGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
3UTR CCA 72 bp CCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCA +
Preference number: 3 (lower is better)
Translates to: PLPHHHLHARWL*FEVDAPRACSS
Trigger: TGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR CCA 72 bp GGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTC +
Preference number: 3 (lower is better)
Translates to: GRDGVDFDLFQG*GAICAALEHVV
Trigger: GACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp GCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: ALAIPRASPLLGLLERILPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...CAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR CCA 72 bp AGGATTCCTGACTCTTTCCAGTGTTCCCCTCTAGGCTaGCTCACTTGGCTGGCACTCTTGCAAGCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: RIPDSFQCSPLG*LTWLALLQAGS
Trigger: ACTACCTGCTTGCAAGAGTGCCAGCCAAGTGAGCCAGCCTAGAGGGGAACACTGGAAAGAGTCAGGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR-3UTR CAA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 3 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CAA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
3UTR TCA 72 bp AGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTaGGCTATACCCACATCTCAAGGATTTGGGGGCGTC +
Preference number: 3 (lower is better)
Translates to: RVHGPLPQSSLP*AIPTSQGFGGV
Trigger: GACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR-3UTR CAA 90 bp CCAGGACCTTCCCTGGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAATCCTCTTGGTGCTATTaGGAGTTTCCTTCACGGTTG +
Preference number: 3 (lower is better)
Translates to: PGPSLDPAEQYLGNCLYQSSWCY*EFPSRL
Trigger: CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGA...TTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR-3UTR CAA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp AGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: SCFRACTISSPYRLLPPPKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...GGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp GCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: AVSGPVPFPPHIGCYLHPKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...AGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp GTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: VDFDLFQGWGAICAALEHLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...ATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp TCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 3 (lower is better)
Translates to: SVAPEHWVSRRAPRLWQFILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...GAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp AGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCACCTTCTTAGTCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 3 (lower is better)
Translates to: SNISSMPGLLSSCCTFLVSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...GACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR GCA 72 bp CCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATCACGAGTGTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PSACSMALVRSR*PTCLFITSVFS
Trigger: GGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
3UTR GCA 72 bp TGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTCTTTTCCTGCCTGACA +
Preference number: 3 (lower is better)
Translates to: CSMALVRSRCPT*LFITSVFSCLT
Trigger: TGTCAGGCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp ATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCGGTGCACAAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: ILPASLVLLRTLRTCRCTKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...TGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
3UTR-3UTR CAA 90 bp CTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 3 (lower is better)
Translates to: LFRDIFKCSSDHMDVPGQKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...CTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
3UTR GCA 72 bp AGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTaGAAAGGACTTCTCATCAGGGCTTCATCTGATACC +
Preference number: 3 (lower is better)
Translates to: SPLGAIWSFLHG*KGLLIRASSDT
Trigger: GGTATCAGATGAAGCCCTGATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CCA 72 bp GTCCTAGGTTGTCAAACCATGTGTTCTGAGTCCTCTTaGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: VLGCQTMCSESS*CYLEFPSRLQR
Trigger: CCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR CCA 72 bp GCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCAGAGATATCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: AISWPSTNSLRS*SRDPFSEISSN
Trigger: ATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
3UTR-3UTR CAA 90 bp TGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCTTCTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 3 (lower is better)
Translates to: WPVAHSLWHAGQICFFPSILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...AGAAGGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
3UTR TCA 72 bp TCTCCTTCTAGTCCTAGGTTGTCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACG +
Preference number: 3 (lower is better)
Translates to: SPSSPRLSNHVF*VLLVLFGVSFT
Trigger: CGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAGGACTAGAAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR GCA 72 bp CTAGGTTGTCAAACCATGTGTTCTGAGTCCTCTTGGTaGTATTTGGAGTTTCCTTCACGGTTGCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: LGCQTMCSESSW*YLEFPSRLQRT
Trigger: AGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
3UTR CCA 72 bp GTCAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTaGAGTTTCCTTCACGGTTGCAAAGGACTTCTCATC +
Preference number: 3 (lower is better)
Translates to: VKPCVLSPLGAI*SFLHGCKGLLI
Trigger: GATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CCA 72 bp TTAATAGATAAAGAAACAGGTAATAAAGCTAGTGATTaGCAGAGCTGGCACCGAAGCCCAGGATTCCTGACT +
Preference number: 3 (lower is better)
Translates to: LIDKETGNKASD*QSWHRSPGFLT
Trigger: AGTCAGGAATCCTGGGCTTCGGTGCCAGCTCTGCCAATCACTAGCTTTATTACCTGTTTCTTTATCTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR GCA 90 bp GACACTGAGAACATGTCGGTGCACAGCTGGGGTCCGGGAGGCCAGGCCCCCAAACCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DTENMSVHSWGPGGQAPKPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...TTTGGGGGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGGTCGGCTGCCCAGGCTaGCCCCACTTCACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGVGCPG*PHFTGP
Trigger: CGGGCCCGTGAAGTGGGGCCAGCCTGGGCAGCCGAC...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644793.1
3UTR CAA 72 bp CCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCCGCTGCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: PVAWLCPHTGYG*SRTATPAATPP
Trigger: TGGTGGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGSCCLS*KRLPQL
Trigger: CAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCT...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp ATGCCCGGCCTGCTTAGCTCCTGCTGCACCTTCTTAGTCCCAGCCAGCTGGGTGCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: MPGLLSSCCTFLVPASWVPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...CACCCAGCTGGCTGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CCTCAGGCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PQAGQGATSPACPACLAPRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGCCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGGCAGGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GQGCQAVAGNSQKAQVRSPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...AGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGGACTGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: EGPVAWLCPHTGYGLSRTATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...AGTCCTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRAPRLWQFPGPVPCWDYMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...ATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AATPPSACSMALVRSRCPMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000643443.1
CDS-3UTR TCA 90 bp CACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HPHPVSRGQQRWRGGGPQVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGGGCTGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PVPFPPHIGCYLHPLSGAARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...AGCCCCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PGFGNSQGQSLAGIIREDARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...ATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp CCTCAGGCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PQAGQGATSPACPACLAPGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR GCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTCAGGCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: PQAGQGATSPACPACLAPRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCAGCTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LHLLSPSQLGGNVWALGSSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...GCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: LPLPLPHHHLHARWLWFEATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...TTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGCAGGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQGCQAVAGNSQKAQVRSQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...AGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCAGCACCCAGGACCTTCCCTaGACCCAGCTGAGCAGTACC +
Preference number: 4 (lower is better)
Translates to: LHLLSPSQLGGNVWALGSTQDLP*TQLSST
Trigger: GGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGGGT...GCTGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGGCGTCGGCTGCACCCTaGCGGATGGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLASAAP*RMDLGK
Trigger: CTTCCCAAGGTCCATCCGCCAGGGTGCAGCCGACGC...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS-3UTR TCA 90 bp CACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: HPHPVSRGQQRWRGGGPQHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CTTCACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCAAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: LHPHPVSRGQQRWRGGGPKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...TGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp ATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IPRASPLLGLLERILPASARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...AGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AIHKQPSVLVQRPLFRDIARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...GATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTGGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VTSPAVDVLPNYKQPSVLARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...CAAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCCCTTCTTCACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLLHPHPVSRGQQRWRGGGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...GCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAAGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: PLPHHHLHARWLWFEVDAPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...GGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GLPGRSRQFSKGSGSIFSPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...GGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: EMVLISICFRAGEPSALRPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...GCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp GCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCAGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AGQGATSPACPACLAPAAVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...TGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: HPHPVSRGQQRWRGGGPQNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGGACTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RTATPAATPPSACSMALVSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...AACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RACTISSPYRLLPPPSLWRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR CCA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCCAGAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: PQRCPALKCTGPLGQGCQKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...CTGGCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCGAAGCCCAGGATTCCTaGCTCTTTCCAGTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCEAQDS*LFPVFP
Trigger: GGGGAACACTGGAAAGAGTCAGGAATCCTGGGCTTC...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTACCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GLPGRSRQFSKGSGSIFSLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...GGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR GCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AATPPSACSMALVRSRCPSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: PQQFPGHPQTAFGLGPETATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...GGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CCA 90 bp GCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AIHKQPSVLVQRPLFRDIRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...GATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CCA 90 bp CAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: QRIEGPVAWLCPHTGYGLPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...CAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: EMVLISICFRAGEPSALRDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...GCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGCCACCACTCCTGATCTaGGCTCGCGATTTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGPPLLI*ARDFVP
Trigger: CGGAACGAAATCGCGAGCCCAGATCAGGAGTGGTGG...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp TGCTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCATGTTCCCCTCTAGGCTaGCTCACTTGGCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: CCTFLVPASWVAMSGHLACSPLG*LTWLAL
Trigger: GAGTGCCAGCCAAGTGAGCCAGCCTAGAGGGGAACA...TGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR TCA 90 bp AGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCACCTTCTTAGTCAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SNISSMPGLLSSCCTFLVRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...GACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLARSTA*RASSSS
Trigger: GCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGC...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGTGATTGGCAGAGCTGGCACCGAAGCCCAGGATTCCTGACTCTTTCCAGTGTTCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SDWQSWHRSPGFLTLSSVPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...AACACTGGAAAGAGTCAGGAATCCTGGGCTTCGGTGCCAGCTCTGCCAATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp AGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SCFRACTISSPYRLLPPPPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...GGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCAAAGCTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: PKLAEMVLISICFRAGEPWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...TGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR GCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTAACGACACGGTCGGCTaGCCAGGCTGGCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSNDTVG*PGWPHF
Trigger: GAAGTGGGGCCAGCCTGGGCAGCCGACCGTGTCGTT...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACCACCTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPPPPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGGTGG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCACCTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PQQFPGHPQTAFGLGPETPPPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGGTGG...GGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATCCACCTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYPPPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGGTGG...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGCTGGCTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSRGQQRWRGGGPQPQAGFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...GCCAGCCTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTGAGCGATTCAGGCAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLGSHLRCAGTCSLSDSGNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...GCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLSFSCFRACTISSPYRLRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSACSMALVRSRCPTCLFQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...GAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPGRSRQFSKGSGSIFSSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...GGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: AEMVLISICFRAGEPSALDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...CAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSAVSGPVPFPPHIGCYLMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...GAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLPHHHLHARWLWFEVDAPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...GGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: PSACSMALVRSRCPTCLFEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...GAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGGGACACACATCACCTaGACTCAGCCCCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: PLPLPHHHLHARWLWFEVGTHIT*TQPQTQ
Trigger: CTGGGTTTGGGGCTGAGTCCAGGTGATGTGTGTCCC...TACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR TCA 90 bp CCTTCTCTTGAGCAATCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCGTGAGGGGAAGAGCGTaGATGGGGCATAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PSLEQSVAPEHWVSRRAPVRGRA*MGHSSP
Trigger: TGGTGAGCTATGCCCCATTCACGCTCTTCCCCTCAC...GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGATTGCTCAAGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646405.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCACATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PEHWVSRRAPRLWQFPGPHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...TGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR TCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTGGAAGGGGCGGTCGATaGGAGGGCGGCCTTAGCATT +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSGRGGR*EGGLSI
Trigger: AATGCTAAGGCCGCCCTCTCATCGACCGCCCCTTCC...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS-3UTR GCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: AVSGPVPFPPHIGCYLHPWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...AGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: VDFDLFQGWGAICAALEHGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...ATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCACTGGCCTACATaGCCCGACACCGGCCCGATC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRSHWPT*PDTGPI
Trigger: GATCGGGCCGGTGTCGGGGCATGTAGGCCAGTGAGA...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR GCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCAGGACTTAGGCCAGTaGCTGGAAAGGCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSQDLGQ*LERPRG
Trigger: GCCTCGGGGCCTTTCCAGGCACTGGCCTAAGTCCTG...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR GCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAGGCTGGGGAGCCATCTaGGCTGCGCTGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLGWGAI*AALGNA
Trigger: GGCATTGCCCAGCGCAGCGCAGATGGCTCCCCAGCC...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643502.1
CDS-3UTR CCA 90 bp CCAGGACCTTCCCTGGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAAGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: PGPSLDPAEQYLGNCLYQGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...TTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DRRSRGLVVPSHRVWVVQVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...CTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GCTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGRDGVDFDLFQGWGAICLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...GCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRARGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LISICFRAGEPSALRWNMRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...CATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGCTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCACCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: CCTFLVPASWVAMSGHLAPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...TGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp CAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGCCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: QRIEGPVAWLCPHTGYGLPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...CAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGGGCACTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQGTPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGTGCC...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
3UTR CAA 72 bp CCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PAATPPSACSMA*VRSRCPTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LPLPLPHHHLHARWLWFEVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...TTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGAGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPAATPPSACSMALVRSRGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...TCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp ATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: IQRIEGPVAWLCPHTGYGCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ALAIPRASPLLGLLERILLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...CAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATATTAGGGAAAGGCTATaGCCCTCCACTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYIRERL*PSTPPP
Trigger: AGGAGGGGGAGTGGAGGGGCATAGCCTTTCCCTAAT...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTTGGCTGGCACTCTTGCAAGCAGGTAGTGGAAAGAGCTTCTCCTGATTGGCTCGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: LGWHSCKQVVERASPDWLGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...GAGCCAATCAGGAGAAGCTCTTTCCACTACCTGCTTGCAAGAGTGCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AVSGPVPFPPHIGCYLHPSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...AGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCATCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LHARWLWFEVDAPRACSSSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...TGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: SLSFSCFRACTISSPYRLATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: DRRSRGLVVPSHRVWVVQHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...CTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGGCTCCAGTCTCACTaGCCTACATGCCCCGACACC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRWLQSH*PTCPDT
Trigger: GGTGTCGGGGCATGTAGGCCAGTGAGACTGGAGCCA...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: DRRSRGLVVPSHRVWVVQFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...CTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGTGAGGGGAAGAGCGTaGATGGGGCATAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PGSKPQQFPGHPQTAFGLVRGRA*MGHSSP
Trigger: TGGTGAGCTATGCCCCATTCACGCTCTTCCCCTCAC...AAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR TCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGTGAGGGGAAGAGCGTaGATGGGGCATAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRVRGRA*MGHSSP
Trigger: TGGTGAGCTATGCCCCATTCACGCTCTTCCCCTCAC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCATTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCAGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: SVAPEHWVSRRAPRLWQFKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...GAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTAGTCAGGTGTCTTCAGTaGCCAGGATATGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELVRCLQ*PGYVGL
Trigger: GAGGCCAACATATCCTGGTCACTGAAGACACCTGAC...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR TCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACAACACCTTTGGCGCTaGGTCGAGGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRQHLWR*VEARKG
Trigger: CCCCTTCCTGGCCTCGACTCAGCGCCAAAGGTGTTG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS-3UTR GCA 90 bp CTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LAEMVLISICFRAGEPSAASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...CGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp CAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QIQRIEGPVAWLCPHTGYGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHIATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHICPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SMALVRSRCPTCLFITSVCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AEMVLISICFRAGEPSALCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...CAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR GCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAATGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTGGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: VTSPAVDVLPNYKQPSVLGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...CAAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CCA 90 bp CCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: PSACSMALVRSRCPTCLFRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...GAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCCCTTCTTCACCCACATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: PLLHPHPVSRGQQRWRGGVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GCCAGGCCCCCAAAGCTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ARPPKLAEMVLISICFRAVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...AGCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAGCTTTGGGGGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp ATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: IQRIEGPVAWLCPHTGYGNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLRESQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KRLRFDLLHEDVGGPLLTLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...AGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHILVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGCCACAGCCTCAGGCTaGCCAGGGAGCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKATASG*PGSNIS
Trigger: GGAGATGTTGCTCCCTGGCCAGCCTGAGGCTGTGGC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PEVNHSNFLAIHKQPSVLSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...CAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHISSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTATGTCGGTGCACAGCTaGGGTCCGGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LERILPASLVLLRTLRTCMSVHS*GPGGQA
Trigger: GGCCTGGCCTCCCGGACCCCAGCTGTGCACCGACAT...ACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GFGNSQGQSLAGIIREDLRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...AAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHIVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NFLAIHKQPSVLVQRPLFVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GFGNSQGQSLAGIIREDLPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...AAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHIPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGAAGGTCCCGTGGCCTaGTTGTGCCCTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKEGPVA*LCPHTG
Trigger: CCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTACGCTCGCTTCCACCCTaGACAAAGTTTGGCCCTAAT +
Preference number: 4 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELRSLPP*TKFGPN
Trigger: ATTAGGGCCAAACTTTGTCCAGGGTGGAAGCGAGCG...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR CAA 72 bp AGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSQALAIPRASP*LGLLERILPAS
Trigger: AGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR TCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMSCCLS*KRLPQL
Trigger: CAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCT...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVRSRCPTCLFITSVFSCATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...GCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSAVSGPVPFPPHIGCYLATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...GAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCCACTCGGGCAGGGCTaGCAGGCCGTAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEPLGQG*QAVAGN
Trigger: ATTGCCTGCTACGGCCTGGCAGCCCTGCCCGAGTGG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVRSRCPTCLFITSVFSCCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...GCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TCACATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATACTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SHGCSWPVAHSLWHAGQILRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...TATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGCCAGGCCCCCAAAGCTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: GQAPKAGRDGVDFDLFQGTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...GCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAGCTTTGGGGGCCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATCCACCTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDPPPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGGTGG...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: EHWVSRRAPRLWQFPGPVVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: CHSRCHTTICMLDGFGSKSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGCAGGGCTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: GQGCQAVAGNSQKAQVRSSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...AGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAGCCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGTGATTGGCAGAGCTGGCACCGAAGCCCAGGATTCCTGACTCTTTCCAGTGTTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SDWQSWHRSPGFLTLSSVVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...AACACTGGAAAGAGTCAGGAATCCTGGGCTTCGGTGCCAGCTCTGCCAATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AEMVLISICFRAGEPSALNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLFRDIFKCSSDHMDVPGQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...GCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATGTAGCCATCCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HVAIPEVNHSNFLAIHKQVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...CTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp CAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QAILKRLRFDLLHEDVGGVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...GCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CFRACTISSPYRLLPPPSVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTACCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: PLPLPHHHLHARWLWFEVPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...TACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGCCTCTTGGTGCTATTTaGAGTTTCCTTCACGGTTGC +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLPLGAI*SFLHGC
Trigger: GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGG...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTGGCTCCCCCAGTTGGTaGCCATCCCAACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLGSPSW*PSQHLW
Trigger: CCAAAGGTGTTGGGATGGCCACCAACTGGGGGAGCC...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS-3UTR TCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AVSGPVPFPPHIGCYLHPVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...AGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp TCCCTGGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAAGAAAGTGCTAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: SLDPAEQYLGNCLYQESAKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...AGCACTTTCTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR TCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHILEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR TCA 90 bp CCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: PLPLPHHHLHARWLWFEVGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...TACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATCAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: QIQRIEGPVAWLCPHTGYQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PEVNHSNFLAIHKQPSVLASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...CAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR GCA 90 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SMALVRSRCPTCLFITSVASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PQTAFGLGPETPFQRYLQATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...TTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR GCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: TPAATPPSACSMALVRSRLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...TCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: SGAGFMDLYLRAAYPELYTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...GTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: RACTISSPYRLLPPPSLWTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RWLWFEVDAPRACSSRVSCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...AGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGGACTGCCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RTATPAATPPSACSMALVPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...AACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGGCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGCCCGTGGCCTGGTTGTaGCCTCACACAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRPVAWL*PHTGYG
Trigger: CCCATACCCTGTGTGAGGGCACAACCAGGCCACGGG...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTCACTAGACACTAGTTaGCCCGCTCCTACGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDSLDTS*PAPTKG
Trigger: ACCCTTCGTAGGAGCGGGGCAACTAGTGTCTAGTGA...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR GCA 90 bp TGCTGCACCTTCTTAGTCCCAGCCAGCTGGGTGGCAATGTCTGGGCACTTGGCAATTTTAGAGTCTCTATaGCTCTCTGGAGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CCTFLVPASWVAMSGHLAILESL*LSGVSF
Trigger: GAAGGAGACTCCAGAGAGGCATAGAGACTCTAAAAT...TGCCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAAGAAGGTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCCACCTCCGAGGAAGTaGGCTCCTGTGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNPPPRK*APVRSS
Trigger: TGAGGACCTCACAGGAGCCCACTTCCTCGGAGGTGG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCGGTGCACAGGGGAAGAGCGTGAATaGGGCATAGCTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: ILPASLVLLRTLRTCRCTGEERE*GIAHHL
Trigger: GAGGTGGTGAGCTATGCCCCATTCACGCTCTTCCCC...TGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: EDRRSRGLVVPSHRVWVVVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RACTISSPYRLLPPPSLWNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TCAGTAGCACCAGAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SVAPEHWVSRRAPRLWQFTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...GAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GTTCATCACGAGTGTCTTTTCCTGCCTATAGAAATGGAGGCAGGGGACACACATCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: VHHECLFLPIEMEAGDTHPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...ATGTGTGTCCCCTGCCTCCATTTCTATAGGCAGGAAAAGACACTCGTGATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp TGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: CPSAVSGPVPFPPHIGCYPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...GTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPSAVSGPVPFPPHIGCYSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...GTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: QIQRIEGPVAWLCPHTGYHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGAACACAGTCTGGGCAATGCCCTCTTTTAGGACTTGCTTGTGGATGTCAAAGAGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GTQSGQCPLLGLACGCQRVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...TCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAGTAGCACCAGAGCATTaGGTGAGCCGTAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRVAPEH*VSRRAP
Trigger: GGGAGCTCTACGGCTCACCCAATGCTCTGGTGCTAC...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAAAGATCCGGAAAGTCTaGGATCAGTGCGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETKIRKV*DQCAPA
Trigger: GGCTGGCGCGCACTGATCCCAGACTTTCCGGATCTT...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACGTTGTAGCTCTAACTaGCTCCAGTCTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRRCSSN*LQSHWP
Trigger: AGGCCAGTGAGACTGGAGCCAGTTAGAGCTACAACG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGTGCTGTCTTCTCTTTaGAACTCTCGCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDVLSSL*NSRHHS
Trigger: GGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCAC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGCCCCCTTCCAGGACTTaGCACGTGCTGTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREPPSRT*HVLSSL
Trigger: AAGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGG...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGAGGCTCCCCCAGTTaGTGGCCATCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRARGSPS*WPSQHL
Trigger: AAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643188.1
ENST00000644793.1
CDS-3UTR CCA 90 bp CCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTCCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: PGSKPQQFPGHPQTAFGLPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...AAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGACCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: RACTISSPYRLLPPPSLWFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCACCCAGGACCTTCCCTaGACCCAGCTGAGCAGTACC +
Preference number: 4 (lower is better)
Translates to: KPCVLSPLGAIWSFLHGCTQDLP*TQLSST
Trigger: GGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGGGT...GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CCA 90 bp TTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCAGAGGCTCCCCCAGTTaGTGGCCATCCCAACACCTG +
Preference number: 4 (lower is better)
Translates to: FLASSSFSMARWSNMFLSRGSPS*WPSQHL
Trigger: CAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCT...GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS-3UTR TCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: QAILKRLRFDLLHEDVGGFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...GCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: CFRACTISSPYRLLPPPSFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR GCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCCAATTACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PNYKQPSVLVQRPLFRDIGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...GATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTAATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SMALVRSRCPTCLFITSVSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHITPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCTGGGTTGTCCAGGACTaGCACTCCCGCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLWVVQD*HSRCHT
Trigger: GGTGTGGCAGCGGGAGTGGCAGTCCTGGACAACCCA...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: PSAVSGPVPFPPHIGCYLVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...GAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp GATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: DGVDFDLFQGWGAICAALPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...CAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR GCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPLLGLLERILPASLVLLGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...GAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp CTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: LAGIIREDLASFFGLTQDGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...GTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLELRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGAAAGTCTGGGATCAGTaGGCGCCAGCCCAACCCCCT +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRKVWDQ*APAQPP
Trigger: AGGGGGTTGGGCTGGCGCGCACTGATCCCAGACTTT...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR GCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTCGCTGCGCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRARCAGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGCGCAGCG...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643502.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRARKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: HGCSWPVAHSLWHAGQICRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...ACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCGTAGCACCAGAGCACTaGAAAGAGTTTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHIVAPEH*KEFAPG
Trigger: TCCTGGAGCAAACTCTTTCCAGTGCTCTGGTGCTAC...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646735.1
CDS-3UTR CCA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQALEPAEKADEGLTGVGFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTGGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTGGGGAGCCATCTGCGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: LAEMVLISICFRAGEPSASHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: CFRACTISSPYRLLPPPSVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SMALVRSRCPTCLFITSVNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FGNSQGQSLAGIIREDLANSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...GGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLESQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGTCCCAGCCAGCTGGGTaGCAATGTCTGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRSQPAG*QCLGTW
Trigger: CCAAGTGCCCAGACATTGCCACCCAGCTGGCTGGGA...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAAGAGGCCAGCAAAGGTaGCGCGGAGGCGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIRGQQR*RGGGPQ
Trigger: CTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCT...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCAAGGGCCTCGGCGATaGCCTGGTCCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLQGPRR*PGPLLH
Trigger: GTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: LAGIIREDLASFFGLTQDPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...GTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRYLQMFVGSHGCSWPVASSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...AGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: TPAATPPSACSMALVRSRFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...TCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCATTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TPFQRYLQMFVGSHGCSWDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...CCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SEISSNVRRITWMFLASSRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...GCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCAGAGGCTCCCCCAGTTaGTGGCCATCCCAACACCTT +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFRGSPS*WPSQHL
Trigger: AAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCT...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643188.1
ENST00000644793.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILKRLRFDLLHEDVGGPLSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...GAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTGATACCCTGGTAAGGTaGGCAGGTCTTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIDTLVR*AGLGSL
Trigger: CAAGGACCCAAGACCTGCCCACCTTACCAGGGTATC...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp CCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAGATACCCTGGTAAGGTaGGCAGGTCTTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PQTAFGLGPETPFQRYLQDTLVR*AGLGSL
Trigger: CAAGGACCCAAGACCTGCCCACCTTACCAGGGTATC...TTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR TCA 90 bp ATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ILKRLRFDLLHEDVGGPLHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...GAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GGTTGTCAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCAAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GCQTMCSESSWCYLEFPSRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...TGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR TCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACATTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTTCACCCACATCCAGTaGGTAGAGGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIFTHIQ*VEASKG
Trigger: ACCTTTGCTGGCCTCTACTCACTGGATGTGGGTGAA...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HPQTAFGLGPETPFQRYLVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...AAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR TCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GCSWPVAHSLWHAGQICFLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...GAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ALAIPRASPLLGLLERILWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...CAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PSAVSGPVPFPPHIGCYLSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...GAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR TCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGATCTCGCCACCACTCCTaGTCTGGGCTCGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGSRHHS*SGLAIS
Trigger: CGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGA...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR TCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCTCTTCCCTGGGCGTaGAACAGATTCAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDSLPWA*NRFRVR
Trigger: CCTGACTCTGAATCTGTTTCACGCCCAGGGAAGAGA...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR TCA 90 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTCTTACTCAGGACACTaGGAACATGTCTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SMALVRSRCPTCLFITSVSYSGH*EHVWAM
Trigger: CATTGCCCAGACATGTTCTCAGTGTCCTGAGTAAGA...GACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR GCA 90 bp CATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HGCSWPVAHSLWHAGQICSCCLS*KRLPQL
Trigger: CAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCT...ACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp CATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HGCSWPVAHSLWHAGQICASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...ACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PFSEISSNVRRITWMFLAGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLFRDIFKCSSDHMDVPGGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...GCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LVRSRCPTCLFITSVFSCSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...GCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGCCATCCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: SHPGSKPQQFPGHPQTAFLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...GAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR GCA 90 bp CAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: QGSWTFTSEQLTLSYTHILVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...GATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: SLSFSCFRACTISSPYRLTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTATGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLCHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCCTGAGAACATGTCGGTaGACAGCTGGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLLRTCR*TAGVRE
Trigger: CTCCCGGACCCCAGCTGTGCACCGACATGTTCTCAG...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATATTTTAGAGTCTCTATaGCTCTCTGGAGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVGQGSWTFTSEQLTLSYILESL*LSGVSF
Trigger: GAAGGAGACTCCAGAGAGGCATAGAGACTCTAAAAT...ATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR GCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACACGAGTGTCTTTTCCTaGCTCCACCCTCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNTSVFS*LHPLSG
Trigger: CCCAGAGAGAGGGTGGAGGCAGGAAAAGACACTCGT...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645328.1
CDS-3UTR CCA 90 bp TTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGC +
Preference number: 4 (lower is better)
Translates to: FLASSSFSMARWSNMFLSRKAAF*LTASTS
Trigger: GCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCT...GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: QQFPGHPQTAFGLGPETPVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...AGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SQGQSLAGIIREDLASFFTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...AAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKDLGASRSTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RYLQMFVGSHGCSWPVAHLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...ATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGAGCTCTGAAATGCACTaGACCACTCGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRSSEMH*TTRAGL
Trigger: CAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCT...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATGTAGCCATCCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: HVAIPEVNHSNFLAIHKQHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...CTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643443.1
CDS-3UTR CCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCACCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PFQRYLQMFVGSHGCSWPPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...TGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QTMCSESSWCYLEFPSRLVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACATCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTGCTGGCTCACTTGGCTaGCACTCTTGCAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QRYLQMFVGSHGCSWPVAAGSLG*HSCKQV
Trigger: TACCTGCTTGCAAGAGTGCCAGCCAAGTGAGCCAGC...AGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp TCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCCTAGGCTGGCTCACTTaGCTGGCACTCTTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SEISSNVRRITWMFLASSLGWLT*LALLQA
Trigger: TGCTTGCAAGAGTGCCAGCCAAGTGAGCCAGCCTAG...GCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCAGCTGAGCAGTACCTaGGTAACTGTCTATACCAAG +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDQLSST*VTVYTK
Trigger: CTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTG...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642498.1
3UTR CAA 72 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCATCTAAGGGAGACACAA +
Preference number: 4 (lower is better)
Translates to: AAYPELYPHLKD*GASRSHLRETQ
Trigger: TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCTATGCCTCGTGAGGGGAAGAGCGTaGATGGGGCATAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LGNCLYQESARILESLCLVRGRA*MGHSSP
Trigger: TGGTGAGCTATGCCCCATTCACGCTCTTCCCCTCAC...GAGGCATAGAGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR TCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTGAGGGGAAGAGCGTaGATGGGGCATAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFVRGRA*MGHSSP
Trigger: TGGTGAGCTATGCCCCATTCACGCTCTTCCCCTCAC...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACAAGGCAGCGTTCTGGCTaGCAGCATCCACTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLERILPASLVLLRTLRTRQRSG*QHPLAG
Trigger: ACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCT...TGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRYLQMFVGSHGCSWPVAVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...AGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR TCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SPLLGLLERILPASLVLLLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...GAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: CFRACTISSPYRLLPPPSWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR TCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGCAGGTACCCAAGCCTTaGGTACTTGTTTCCTACATC +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRQVPKP*VLVSYI
Trigger: GATGTAGGAAACAAGTACTCAAGGCTTGGGTACCTG...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR TCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTTCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLSNHVF*VLLVLF
Trigger: AAATAGCACCAAGAGGACTCAGAACACATGGTTTGA...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCAGCATGCCCGGCCTaGTTAGCTCCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIPACPA*LAPAAP
Trigger: AGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGG...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGCAACATCTCCAGCATaGCCGGCCTGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLATSPA*PACLAP
Trigger: AGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGC...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTTGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFCPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: PLFRDIFKCSSDHMDVPGVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...GCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGTGCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFVLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGGAGCCATCTGCGCTaGGCTGGAACATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGGSHLR*AGTCSL
Trigger: CAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCC...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCAGTCTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: GCSWPVAHSLWHAGQICFSLERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGACT...GAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS-3UTR CCA 90 bp CTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCAGGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: LLHEDVGGPLLTVLQLFQVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...CTGAAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CCA 90 bp TCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SACSMALVRSRCPTCLFISHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGCCATCCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SHPGSKPQQFPGHPQTAFSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PFSEISSNVRRITWMFLAVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRANSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLERILPASLVLLRTLRTLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...TGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTTAGTCCCAGCCAGCTaGGTGGCAATGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLLVPAS*VAMSGH
Trigger: GTGCCCAGACATTGCCACCCAGCTGGCTGGGACTAA...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTCCTCCACCCTCTCTCTaGGGCTTTAGCACAAACCGG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFPPPSL*GFSTNR
Trigger: CCGGTTTGTGCTAAAGCCCCAGAGAGAGGGTGGAGG...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: SACSMALVRSRCPTCLFIHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...GATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CCCGGAAGTAAACCACAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PGSKPQQFPGHPQTAFGLFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...AAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGTTTACTTCCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CCA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCCCTCACACAGGGTATaGGTTGTCCAGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLPSHRV*VVQDCH
Trigger: GTGGCAGTCCTGGACAACCCATACCCTGTGTGAGGG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGCTCCCCCAGTTGGTaGCCATCCCAACACCTTCAA +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGGSPSW*PSQHLQ
Trigger: TTGAAGGTGTTGGGATGGCCACCAACTGGGGGAGCC...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTTTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSWPVAHSLWHAGQICFFVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...AAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTGGGGCAGGGTTCATaGACCTTTACCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEVGQGS*TFTSEQ
Trigger: CTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGCCTCTTGGTGCTATTTaGAGTTTCCTTCACGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLSFSCFRACTISSPYRLPLGAI*SFLHGC
Trigger: GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGG...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp CCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCGTAGCACCAGAGCACTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: PFSEISSNVRRITWMFLAVAPEH*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGTGCTCTGGTGCTAC...GGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGGTCTCTATGCCTCTCTaGAGTCTCCTTCTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SLSFSCFRACTISSPYRLVSMPL*SLLLVL
Trigger: TAGGACTAGAAGGAGACTCCAGAGAGGCATAGAGAC...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR TCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCTTCTCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: WPVAHSLWHAGQICFFPSLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...AGAAGGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACATGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCCAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: SEISSNVRRITWMFLASSQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...GCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR TCA 90 bp CTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGCCTGATTGGCTCACCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LFRDIFKCSSDHMDVPGQPDWLT*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGTGAGCCAATCAGG...CTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp ACCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TPFQRYLQMFVGSHGCSWASSSS*CLSCKR
Trigger: CCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGC...CCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGCACTGGAAAGAGTTTaGTCCAGGAAGGCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEALERV*SRKAAF
Trigger: GAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGTGC...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646735.1
CDS-3UTR GCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGCCTGCTTAGCTCCTaGTGCACCTTCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGGLLSS*CTFLVP
Trigger: TGGGACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCC...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFTPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGTGCCACACCACCATCTaGATGCTCGATGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLECHTTI*MLDGFG
Trigger: ACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCA...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GTTCATCACGAGTGTCTTTTCCTGCCTATAGAAATGGAGGCAGGGGACACACATACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: VHHECLFLPIEMEAGDTHTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...ATGTGTGTCCCCTGCCTCCATTTCTATAGGCAGGAAAAGACACTCGTGATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR GCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGAACATGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRNMSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACATGTT...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR GCA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAATTAGGGAAAGGCTATaGCCCTCCACTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVIRERL*PSTPPP
Trigger: AGGAGGGGGAGTGGAGGGGCATAGCCTTTCCCTAAT...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR GCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGATTAGGGAAAGGCTATaGCCCTCCACTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLIRERL*PSTPPP
Trigger: AGGAGGGGGAGTGGAGGGGCATAGCCTTTCCCTAAT...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCAGGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGFGNSQGQSLAGIIREDFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...ATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp ACAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TNTEDRRSRGLVVPSHRVFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CCA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: RAAYPELYPHLKDLGASRVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: PELYPHLKDLGASRSHLRSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRATTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: QAILKRLRFDLLHEDVGGFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...GCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIDLFQG*GAICAA
Trigger: CGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATC...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGTGACCAGGATATGTTaGCCTCTGTCCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGVTRIC*PLSPFQ
Trigger: CTGGAAGGGGGACAGAGGCCAACATATCCTGGTCAC...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCCCAGGAACACAGTCTaGGCAATGCCCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEPRNTV*AMPSFR
Trigger: CCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCCCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: GCSWPVAHSLWHAGQICFPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...GAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CCA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELYPHLKDLGASRSHLREETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCGTTCGATCTTCTCCATaGGGATGTAGGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLVRSSP*GCRRPS
Trigger: AGAGGGCCTCCTACATCCTCATGGAGAAGATCGAAC...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAAAGATGCCCAGCTCTaGAATGCACTGGACCACTCG +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLKDAQL*NALDHS
Trigger: CGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTT...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGTGTCTTTTCCTGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRVSFPA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCAGGAAAAGACAC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRYLQMFVGSHGCSWPVAWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...AGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QTMCSESSWCYLEFPSRLWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR TCA 90 bp CCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCATCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PFQRYLQMFVGSHGCSWPSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...TGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAAGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: YPHLKDLGASRSHLRETQGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TACCTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCTATGCCTTGGGTCCTTGGCCTaGCATAGACCCCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: YLGNCLYQESARILESLCLGSLA*HRPQRC
Trigger: GCATCTTTGGGGTCTATGTCAGGCCAAGGACCCAAG...GCATAGAGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR GCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGSCCLS*KRLPQL
Trigger: CAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCT...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFSCCLS*KRLPQL
Trigger: CAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCT...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATATGCCCAGCTCTGAAATaGACTGGACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRICPALK*TGPLGQ
Trigger: CTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCA...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRSRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLESRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGACACCACCATCTGCATaGTCGATGGCTTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLETPPSA*SMALVR
Trigger: TCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGT...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTCTTGGCTGGCACTCTTaGAAGCAGGTAGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCLGWHS*KQVVER
Trigger: TCTTTCCACTACCTGCTTGCAAGAGTGCCAGCCAAG...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp ATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCTCTGAGTCCTCTTGGTaGTATTTGGAGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ILKRLRFDLLHEDVGGPLSESSW*YLEFPS
Trigger: TGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGA...GAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR GCA 90 bp AGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATCAGAGCACTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: RYLQMFVGSHGCSWPVAHQSTGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGTGCTCTG...ATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CCA 90 bp CTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHARWLWFEVDAPRACSSFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: GCSWPVAHSLWHAGQICFSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRISHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTTCGTCGGATCACATaGATGTTCCTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFVRRIT*MFLASS
Trigger: GCTACTGGCCAGGAACATCCATGTGATCCGACGAAC...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: PHLKDLGASRSHLRETQLHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTACATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCCAATTACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PNYKQPSVLVQRPLFRDIFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...GATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
CDS-3UTR CCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAAGAGCTCCCAGGCTTTaGCAATTCCCAGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIRAPRL*QFPGPV
Trigger: GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCT...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAACACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: TMCSESSWCYLEFPSRLQHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...TTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
3UTR CAA 72 bp AGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SNFLAIHKQPSV*VQRPLFRDIFK
Trigger: TTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TACCTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCTATGCCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YLGNCLYQESARILESLCLEHVV*AIQAQE
Trigger: TTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAG...GCATAGAGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR TCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGTGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LLERILPASLVLLRTLRTSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...TGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR TCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTCTTACTCAGGACACTaGGAACATGTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLSYSGH*EHVGAQ
Trigger: CTGTGCACCGACATGTTCTCAGTGTCCTGAGTAAGA...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR TCA 90 bp AAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: KPCVLSPLGAIWSFLHGCGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...GCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR TCA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGGAACAGTGTTTGTCTTaGTCACTTCTCTACCTAGTA +
Preference number: 4 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGEQCLS*SLLYLV
Trigger: TACTAGGTAGAGAAGTGATCAAGACAAACACTGTTC...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR TCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGACAGAGCAGCTTACCCTaGGCTATACCCACATCTCAA +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGQSSLP*AIPTSQ
Trigger: TTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTG...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTATCAAACCATGTGTTCTaGGTCCTCTTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: YPELYPHLKDLGASRSHLSNHVF*VLLVLF
Trigger: AAATAGCACCAAGAGGACTCAGAACACATGGTTTGA...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR GCA 90 bp TGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: CSWPVAHSLWHAGQICFFLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...AAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSPLGAIWSFLHGCKGLLPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...GAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR GCA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR GCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR GCA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTACACAGTCTGGGCAATaGCCTCTTTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCTQSGQ*PLLGLA
Trigger: AGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGT...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000643443.1
CDS-3UTR GCA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCTGAGTCCTCTTGGTaGTATTTGGAGTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDSESSW*YLEFPS
Trigger: TGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGA...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: HKQPSVLVQRPLFRDIFKSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...TTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVNSLRS*SRDPFS
Trigger: TGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTT...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCCATGCTCGATGGCTTTaGTTCGAAGTAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLHARWL*FEVDAP
Trigger: TGGGGCATCTACTTCGAACCAAAGCCATCGAGCATG...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAAGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TMCSESSWCYLEFPSRLQETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...TTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TACCTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCTATGCTCCCAAGTCAGGCACTaGAACCTGCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YLGNCLYQESARILESLCSQVRH*NLLKRL
Trigger: CAGCCTTTTCAGCAGGTTCCAGTGCCTGACTTGGGA...GCATAGAGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGTCTCTATGCCTCTCTaGAGTCTCCTTCTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRVSMPL*SLLLVL
Trigger: TAGGACTAGAAGGAGACTCCAGAGAGGCATAGAGAC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CCA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTACCCAGGAACACAGTCTaGAAAGAGTTTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVPRNTV*KEFAPG
Trigger: TCCTGGAGCAAACTCTTTCCAGACTGTGTTCCTGGG...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646766.1
3UTR CAA 72 bp GTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VDVLPNYKQPSV*VQRPLFRDIFK
Trigger: TTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
CDS-3UTR TCA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLLVRSR*PTCLFI
Trigger: GATGAACAAGCACGTGGGGCATCTACTTCGAACCAA...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: DPAEQYLGNCLYQESARIFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...AATCCTAGCACTTTCTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CCA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LYPHLKDLGASRSHLRETFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CCCCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: PLFRDIFKCSSDHMDVPGVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CCA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGTAGCTCATTCTCTATaGCACGCTGGTCAAATATGT +
Preference number: 4 (lower is better)
Translates to: HLKDLGASRSHLRETQLFVAHSL*HAGQIC
Trigger: ACATATTTGACCAGCGTGCCATAGAGAATGAGCTAC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTACCACAGCAATTTCCTaGCCATCCACAAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSEISSNVRRITWMFLASTTAIS*PSTNSL
Trigger: AAGGCTGTTTGTGGATGGCCAGGAAATTGCTGTGGT...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CCA 90 bp GATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: DGKLGEGTSIYPSIKTLEHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...CTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAATGTCATCTGCATGCTCGATaGCTTTGGTTCGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KQPSVLVQRPLFRDIFKCHLHAR*LWFEVD
Trigger: ATCTACTTCGAACCAAAGCCATCGAGCATGCAGATG...ACATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CCA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAATCTCCCCAAATCCTATaGATTTTGCTGCCTAAGTAT +
Preference number: 4 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKSPQIL*ILLPKY
Trigger: ATACTTAGGCAGCAAAATCCATAGGATTTGGGGAGA...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGACCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCCCTCAGATGGAAAGCTaGGGGAAGGTACCAGTATTT +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLPQMES*GKVPVF
Trigger: AAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGG...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCACATCTCAAGGATTTaGGGGCGTCTAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLHISRI*GRLDLI
Trigger: GATGAGATCTAGACGCCCCCAAATCCTTGAGATGTG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTCAGCTGAGCAGTACCTaGGTAACTGTCTATACCAAG +
Preference number: 4 (lower is better)
Translates to: FSEISSNVRRITWMFLASQLSST*VTVYTK
Trigger: CTTGGTATAGACAGTTACCCAGGTACTGCTCAGCTG...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
3UTR CAA 72 bp TGTCAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTaGGAGTTTCCTTCACGGTTGCAAAGGACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: CQTMCSESSWCY*EFPSRLQRTSH
Trigger: ATGAGAAGTCCTTTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR TCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACATCCACTAGCAGGTTaGAGTCCATCTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIHPLAG*SPSAQH
Trigger: ATGCTGTGCAGATGGACTTCAACCTGCTAGTGGATG...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGGCTAGGAGAGGAATaGCAAATACAGAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFGLGEE*QIQRIE
Trigger: TTCTATCCTCTGTATTTGTCATTCCTCTCCTAGCCC...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRISRCPT*LFITSV
Trigger: GACACTCGTGATGAACAAGCACGTGGGGCATCTACT...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCTTCTCTCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ASSSFSMARWSNMFLSFSPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...AGAGAAGGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR GCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGATGTCTCCCACAAATCTaGTTCTTCTCTGATGAACCC +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGCLPQI*FFSDEP
Trigger: GGGTTCATCAGAGAAGAAGCAGATTTGTGGGAGACA...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGATCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGTCACATGGATGTTCCTaGCCAGTAGCTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLSHGCS*PVAHSL
Trigger: TAGAGAATGAGCTACTGGCCAGGAACATCCATGTGA...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCTTTAGGACTTGCTTGTaGATGTCAAAGAGACGAGCG +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLFRTCL*MSKRRA
Trigger: CGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAA...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATATTTCTGGTCCTCAGATaGAAAGCTGGGGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIFLVLR*KAGGRY
Trigger: GTACCTTCCCCCAGCTTTCCATCTGAGGACCAGAAA...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGAGACACAACTTTTCTaGTCCTCAGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFETQLF*SSDGKL
Trigger: CAGCTTTCCATCTGAGGACCAGAAAAGTTGTGTCTC...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR TCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATATGGCAGAGATGGTGTTaGTTTCGATCTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIWQRWC*FRSVSG
Trigger: CCCTGAAACAGATCGAAATCAACACCATCTCTGCCA...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR GCA 90 bp GAGCAGTACCTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: EQYLGNCLYQESARILESPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...AGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAGGTACTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CCA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCTTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CCA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR GCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIPSFRT*LWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGG...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CCA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATATTCTCTATGGCACGCTaGTCAAATATGTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIFSMAR*SNMFLS
Trigger: GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAA...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS GCA 90 bp TTAGGCCAGTGCCTGGAAAGGCCCCGAGGCAACGACACGGTCGGCTaGCCAGGCTGGCCCCACTTCACGGGCCCGCTCGCTTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: LGQCLERPRGNDTVG*PGWPHFTGPLASTL
Trigger: CAGGGTGGAAGCGAGCGGGCCCGTGAAGTGGGGCCAGCCTGGGCAGCCGACCGTGTCGTTGCCTCGGGGCCTTTCCAGGCACTGGCCTAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 90 bp TGCCTGGAAAGGCCCCGAGGCAACGACACGGTCGGCTGCCCAGGCTaGCCCCACTTCACGGGCCCGCTCGCTTCCACCCTGGACAAAGTT +
Preference number: 5 (lower is better)
Translates to: CLERPRGNDTVGCPG*PHFTGPLASTLDKV
Trigger: AACTTTGTCCAGGGTGGAAGCGAGCGGGCCCGTGAAGTGGGGCCAGCCTGGGCAGCCGACCGTGTCGTTGCCTCGGGGCCTTTCCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS TCA 90 bp CCCAACACCTTTGGCGCTGAGTCGAGGCCAGGAAGGGGCGGTCGATaGGAGGGCGGCCTTAGCATTAGGAGTGCGTCGGCTGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: PNTFGAESRPGRGGR*EGGLSIRSASAAPW
Trigger: CCAGGGTGCAGCCGACGCACTCCTAATGCTAAGGCCGCCCTCTCATCGACCGCCCCTTCCTGGCCTCGACTCAGCGCCAAAGGTGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS-3UTR CAA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS GCA 90 bp CGGTCCACGGCCTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RSTACRASSSSCCLS*KRLPQLVAIPTPEV
Trigger: CACCTCGGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645102.1
CDS GCA 90 bp CTGGGATCAGTGCGCGCCAGCCCAACCCCCTCACTAGACACTAGTTaGCCCGCTCCTACGAAGGGTTTCAGCCACAAGGTCTCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: LGSVRASPTPSLDTS*PAPTKGFSHKVSRP
Trigger: AGGCCGGGAGACCTTGTGGCTGAAACCCTTCGTAGGAGCGGGGCAACTAGTGTCTAGTGAGGGGGTTGGGCTGGCGCGCACTGATCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 90 bp CCCACAAGGAAATCGGTCGCACTTTATCGCCAGGACTTAGGCCAGTaGCTGGAAAGGCCCCGAGGCAACGACACGGTCGGCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PTRKSVALYRQDLGQ*LERPRGNDTVGCPG
Trigger: GCCTGGGCAGCCGACCGTGTCGTTGCCTCGGGGCCTTTCCAGGCACTGGCCTAAGTCCTGGCGATAAAGTGCGACCGATTTCCTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644793.1
ENST00000645723.1
ENST00000646502.1
CDS GCA 90 bp CGGTCCACGGCCTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: RSTACRASSSSCCLS*KRLPQLVAIPTPLA
Trigger: CGCCAAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS GCA 90 bp CGGTCCACGGCCTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACTAGTTCGC +
Preference number: 5 (lower is better)
Translates to: RSTACRASSSSCCLS*KRLPQLVAIPTLVR
Trigger: GCGAACTAGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000642493.1
ENST00000642498.1
ENST00000642538.1
ENST00000643203.1
ENST00000643443.1
ENST00000643628.1
ENST00000643908.1
ENST00000644197.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GCTGGCCAGGGAGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCAGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: AGQGATSPACPACLAPAAAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...TGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCTCCCTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS GCA 90 bp CGGTCCACGGCCTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: RSTACRASSSSCCLS*KRLPQLVAIPTPSN
Trigger: GTTTGAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 90 bp CCAGCAGGGCACTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACTAGTTCGC +
Preference number: 5 (lower is better)
Translates to: PAGHCRASSSSCCLS*KRLPQLVAIPTLVR
Trigger: GCGAACTAGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGTGCCCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643690.1
CDS GCA 90 bp CGGTCCACGGCCTGCCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTaGAAGAGGCTCCCCCAGTTGGTGGCCATCCCAACACCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: RSTACRASSSSCCLS*KRLPQLVAIPTPCD
Trigger: ATCACAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643271.1
CDS-3UTR CAA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCTGCACAGCATAGGCTaGCTCCAGCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYLHSIG*LQQGTG
Trigger: CCCAGTGCCCTGCTGGAGCAAGCCTATGCTGTGCAG...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAGCATTGGGTGAGCCGTAGAGCTCCCAGGCTTTGGCAATTCCCAGGGCCAGTCCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: EHWVSRRAPRLWQFPGPVHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...GACTGGCCCTGGGAATTGCCAAAGCCTGGGAGCTCTACGGCTCACCCAATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS CCA 90 bp CCTGGACAAAGTTTGGCCCTAATCGCTCCCCGTTGTAGCTCTAACTaGCTCCAGTCTCACTGGCCTACATGCCCCGACACCGGCCCGATC +
Preference number: 5 (lower is better)
Translates to: PGQSLALIAPRCSSN*LQSHWPTCPDTGPI
Trigger: GATCGGGCCGGTGTCGGGGCATGTAGGCCAGTGAGACTGGAGCCAGTTAGAGCTACAACGGGGAGCGATTAGGGCCAAACTTTGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 90 bp GCACGTGCTGTCTTCTCTTTGGAACTCTCGCCACCACTCCTGATCTaGGCTCGCGATTTCGTTCCGGAAGCTGTCCCTGTTCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: ARAVFSLELSPPLLI*ARDFVPEAVPVLRP
Trigger: GGGGCGGAGAACAGGGACAGCTTCCGGAACGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 90 bp TTTAGCACAAACCGGCTAGGGGCAGCAAGGGCCTCGGCGATGGCCTaGTCCCCTTCTTCACCCTGGCAGGAGGCAGAAAGCAGTTATCAA +
Preference number: 5 (lower is better)
Translates to: FSTNRLGAARASAMA*SPSSPWQEAESSYQ
Trigger: TTGATAACTGCTTTCTGCCTCCTGCCAGGGTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCTTGCTGCCCCTAGCCGGTTTGTGCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644694.1
CDS-3UTR CAA 90 bp GAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: EDRRSRGLVVPSHRVWVVAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...GACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CAA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SQALEPAEKADEGLTGVGAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: DRRSRGLVVPSHRVWVVQAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CATCCAGTGAGTAGAGGCCAGCAAAGGTGGCGCGGAGGCGGGCCACAGCCTCAGCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: HPVSRGQQRWRGGGPQPQLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...CTGAGGCTGTGGCCCGCCTCCGCGCCACCTTTGCTGGCCTCTACTCACTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000645408.1
CDS-3UTR CAA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SQALEPAEKADEGLTGVGPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS GCA 90 bp GCCCAGGAACACAGTCTGTGGGGAAAACTGAAGGCTGACAGTACCTaGCCAGGGACTGACTCTGAGGACCTAGCCACAGAGCACACAGGT +
Preference number: 5 (lower is better)
Translates to: AQEHSLWGKLKADST*PGTDSEDLATEHTG
Trigger: ACCTGTGTGCTCTGTGGCTAGGTCCTCAGAGTCAGTCCCTGGGCAGGTACTGTCAGCCTTCAGTTTTCCCCACAGACTGTGTTCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643908.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS-3UTR CAA 90 bp AGACCCCAAAGATGCCCAGCTCTGAAATGCACTGGACCACTCGGGCAGGGCTGCTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RPQRCPALKCTGPLGQGCSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GCAGCCCTGCCCGAGTGGTCCAGTGCATTTCAGAGCTGGGCATCTTTGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp ACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGACACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: TPAATPPSACSMALVRSRHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...TCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS TCA 90 bp ACTTGGCACGTGCTGTCTTCTCTTTGGAACTCTCGCCACCACTCCTaGTCTGGGCTCGCGATTTCGTTCCGGAAGCTGTCCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TWHVLSSLWNSRHHS*SGLAISFRKLSLFS
Trigger: GGAGAACAGGGACAGCTTCCGGAACGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACGTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS TCA 90 bp TTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAACACAGTCTGGAAAGAGTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: FQGWGAICAALEHVV*AIQAQEHSLERVCS
Trigger: GGAGCAAACTCTTTCCAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS GCA 90 bp GCCCCAGAGGCTAGGGCTCTGGCTGACTCACCTCTCTGTCCTCAGTaGCTACAATGGCCCGGCATAGAGCAGGCATTTGGTAAAGATTTG +
Preference number: 5 (lower is better)
Translates to: APEARALADSPLCPQ*LQWPGIEQAFGKDL
Trigger: CAAATCTTTACCAAATGCCTGCTCTATGCCGGGCCATTGTAGGCACTGAGGACAGAGAGGTGAGTCAGCCAGAGCCCTAGCCTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643628.1
CDS-3UTR CAA 90 bp GATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTCTGCACAGCATAGGCTaGCTCCAGCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: DLLHEDVGGPLLTVLQLFLHSIG*LQQGTG
Trigger: CCCAGTGCCCTGCTGGAGCAAGCCTATGCTGTGCAG...AAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TCTGTTTCAGGGCTGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTGAGCAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SVSGLGSHLRCAGTCSLSKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...GCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCAGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGGGCTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GADRSGAGFMDLYLRAAYSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: PAATPPSACSMALVRSRCACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...GCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000645328.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CAGCAATTTCCTGGCCATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: QQFPGHPQTAFGLGPETPPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...AGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATGGCCAGGAAATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: RAAYPELYPHLKDLGASRGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGCTGCACAGCATAGGCTaGCTCCAGCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: SWTFTSEQLTLSYTHISRLHSIG*LQQGTG
Trigger: CCCAGTGCCCTGCTGGAGCAAGCCTATGCTGTGCAG...CCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTGCACAGCATAGGCTaGCTCCAGCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: CFRACTISSPYRLLPPPSLHSIG*LQQGTG
Trigger: CCCAGTGCCCTGCTGGAGCAAGCCTATGCTGTGCAG...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000646405.1
CDS-3UTR CAA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: RACTISSPYRLLPPPSLWAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp AGCAACATCTCCAGCATGCCCGGCCTGCTTAGCTCCTGCTGCACCTTCTTAGTCTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SNISSMPGLLSSCCTFLVSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GACTAAGAAGGTGCAGCAGGAGCTAAGCAGGCCGGGCATGCTGGAGATGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp AGTCAGGCACTGGAACCTGCTGAAAAGGCTGATGAGGGGCTGACAGGAGTGGGGAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SQALEPAEKADEGLTGVGRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...CCCCACTCCTGTCAGCCCCTCATCAGCCTTTTCAGCAGGTTCCAGTGCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: LVRSRCPTCLFITSVFSCGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...GCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000646405.1
CDS-3UTR CAA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTACGTGCTGTCTTCTCTTaGGAACTCTCGCCACCACTC +
Preference number: 5 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELRAVFS*ELSPPL
Trigger: GAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACG...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGGCCATCCCAACACCTTaGGCGCTGAGTCGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGAIPTP*ALSRGQ
Trigger: CTGGCCTCGACTCAGCGCCAAAGGTGTTGGGATGGC...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS GCA 90 bp GCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATaGCCCACGTGCTTGTTCATCACGAGTGTCTTTTCCTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: ATPPSACSMALVRSR*PTCLFITSVFSCLH
Trigger: GTGGAGGCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645328.1
CDS CCA 90 bp AGCACCAGAGCACTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: STRALERVCSRKAAF*LTASTSRLKSICTA
Trigger: TGCTGTGCAGATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGTGCTCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451957.2
ENST00000646735.1
CDS-3UTR CAA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCTGCACAGCATAGGCTaGCTCCAGCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: WTFTSEQLTLSYTHISRILHSIG*LQQGTG
Trigger: CCCAGTGCCCTGCTGGAGCAAGCCTATGCTGTGCAG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCAGGACCTTCCCTGGACCCAGCTGAGCAGTACCTGGGTAACTGTCTATACCAATCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PGPSLDPAEQYLGNCLYQSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...TTGGTATAGACAGTTACCCAGGTACTGCTCAGCTGGGTCCAGGGAAGGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CAA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: RACTISSPYRLLPPPSLWACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: FTSEQLTLSYTHISRIWGHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...CCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACACAGGGTATGGGTTGTCCAGATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: DRRSRGLVVPSHRVWVVQILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...CTGGACAACCCATACCCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: AATPPSACSMALVRSRCPPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000645328.1
ENST00000646405.1
CDS CCA 90 bp CAGGAACACAGTCTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: QEHSLERVCSRKAAF*LTASTSRLKSICTA
Trigger: TGCTGTGCAGATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGACTGTGTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS-3UTR CAA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLSFSCFRACTISSPYRLAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: PELYPHLKDLGASRSHLRAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: CFRACTISSPYRLLPPPSAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...AGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: LYPHLKDLGASRSHLRETHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PAATPPSACSMALVRSRCLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...GCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000643443.1
CDS-3UTR CAA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TGTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: CDLSSSRRASQLQTAFGLPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...AAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642493.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS CCA 90 bp TGTTTGATGGTGCTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: CLMVLERVCSRKAAF*LTASTSRLKSICTA
Trigger: TGCTGTGCAGATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCACCATCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000642498.1
ENST00000642538.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000644793.1
ENST00000645102.1
ENST00000645723.1
ENST00000646405.1
ENST00000646497.1
ENST00000646502.1
ENST00000646512.1
ENST00000651619.1
CDS CCA 90 bp GGGAGGGACAGGTTACAGACTGGAGTAGGGCTGGGAATGGTTACCTaGGCAATGCCCTCTTTTAGGACTTGCTTGTGGATGTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: GRDRLQTGVGLGMVT*AMPSFRTCLWMSKR
Trigger: TCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCATTCCCAGCCCTACTCCAGTCTGTAACCTGTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CCA 90 bp GTGAAACAGATTCAGAGTCAGGTGTCTTCAGTGACCAGGATATGTTaGCCTCTGTCCCCCTTCCAGGACTTGGCACGTGCTGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VKQIQSQVSSVTRIC*PLSPFQDLARAVFS
Trigger: AGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCAACATATCCTGGTCACTGAAGACACCTGACTCTGAATCTGTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS-3UTR CAA 90 bp AAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: KRLRFDLLHEDVGGPLLTKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...AGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AAYPELYPHLKDLGASRSSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: ELYPHLKDLGASRSHLREACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: HLKDLGASRSHLRETQLFHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTACCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: YPELYPHLKDLGASRSHLPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PHLKDLGASRSHLRETQLPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...AAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAACACCCTGGACAAAGTTaGGCCCTAATCGCTCCCCGT +
Preference number: 5 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKHPGQS*ALIAPR
Trigger: ACGGGGAGCGATTAGGGCCAAACTTTGTCCAGGGTG...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTCCCCCTTCCAGGACTaGGCACGTGCTGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: WTFTSEQLTLSYTHISRISPFQD*ARAVFS
Trigger: AGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGA...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp GATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTACTTGGCTGGCACTCTaGCAAGCAGGTAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: DLLHEDVGGPLLTVLQLFTWLAL*QAGSGK
Trigger: CTTTCCACTACCTGCTTGCAAGAGTGCCAGCCAAGT...AAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS-3UTR CAA 90 bp TCACTGTCCTTCAGCTGTTTCAGGGCCTGTACCATTTCCTCCCCATATAGGTTGAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SLSFSCFRACTISSPYRLKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...CAACCTATATGGGGAGGAAATGGTACAGGCCCTGAAACAGCTGAAGGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: HLKDLGASRSHLRETQLFAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTTGTTCATCACGAGTGTCTAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RWLWFEVDAPRACSSRVSRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...AGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: HGCSWPVAHSLWHAGQICACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...ACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACAGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: LYPHLKDLGASRSHLRETACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...TGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGCACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTGACAGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: LTGVGQGSWTFTSEQLTLVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...CAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCACTCCCGCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: PLPLPHHHLHARWLWFEVVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...TACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGCGGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CTGCCAGGCCGTAGCAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: LPGRSRQFSKGSGSIFSMILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...CATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTGCTACGGCCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGCCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLAGIIREDLASFFGLTQPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...CTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp CTGGTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAGTGACCAGGATATGTaGGCCTCTGTCCCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: LVLRWKAGGRYQYLPFHKSDQDM*ASVPLP
Trigger: TGGAAGGGGGACAGAGGCCAACATATCCTGGTCACT...TTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp AGGGCCTGTACCATTTCCTCCCCATATAGGTTGTTACCTCCACCCTCTCTCTGGTCCTCTTGGTGCTATTaGGAGTTTCCTTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: RACTISSPYRLLPPPSLWSSWCY*EFPSRL
Trigger: CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGA...CCAGAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGAAATGGTACAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS GCA 90 bp GTAGGGCTGGGAATGGTTACCTGGGCAATGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: VGLGMVTWAMPSFRT*LWMSKRRAVKSSCL
Trigger: CAAACAGGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCATTCCCAGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS GCA 90 bp TTCAGGCCCAGGAACACAGTCTGGGCAATGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: FRPRNTVWAMPSFRT*LWMSKRRAVKSSCL
Trigger: CAAACAGGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGGCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000642493.1
ENST00000642498.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000644793.1
ENST00000646497.1
ENST00000646502.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATCCACAAACAGCCTTCGGTCTTGGTCCAGAGACCCCTTTTCAGAGATATCTTAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: HPQTAFGLGPETPFQRYLKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...AAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRASSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAATCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YPHLKDLGASRSHLRETQSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...TTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: ELYPHLKDLGASRSHLRERCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...CTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: HLKDLGASRSHLRETQLFACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: VGQGSWTFTSEQLTLSYTVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...GGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCATCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: GAGFMDLYLRAAYPELYPSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...TGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGCTTTGGCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GFGNSQGQSLAGIIREDLLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...AAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGCCAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp AGAGGAATGACAAATACAGAGGATAGAAGGTCCCGTGGCCTGGTTGTGCCCTCACTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGMTNTEDRRSRGLVVPSLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...TGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTGTCATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CAA 90 bp TCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: SQGQSLAGIIREDLASFFILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...AAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp AGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGAATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: RAAYPELYPHLKDLGASRILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...TCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GCTGCCACACCACCATCTGCATGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: AATPPSACSMALVRSRCPLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGCAGATGGTGGTGTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642498.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GGTTGTCAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACCCAGGGCCAGTCCCTaGCTGGGATTATTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: GCQTMCSESSWCYLEFPSPRASP*LGLLER
Trigger: CCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGG...TGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTGACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CAA 90 bp ACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCAAAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: TMCSESSWCYLEFPSRLQKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...TTGCAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CAA 90 bp TTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTTTCTTTCCAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FLASSSFSMARWSNMFLSKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...GGAAAGAAACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGCAATGTCTGGGCACTaGGCAGCATGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLAMSGH*AACDLS
Trigger: GGAGAGGTCACATGCTGCCAAGTGCCCAGACATTGC...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGGAGACACAACTTTTCTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HLKDLGASRSHLRETQLFSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GAAAAGTTGTGTCTCCCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: YPELYPHLKDLGASRSHLRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: GEGTSIYPSIKTLEVFRRACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...CCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTAAGGCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PELYPHLKDLGASRSHLRLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...CCTTAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TTCCTGCCTATAGAAATGGAGGCAGGGGACACACATCACCTGGACTCAGCCCCATTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: FLPIEMEAGDTHHLDSAPLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...TGGGGCTGAGTCCAGGTGATGTGTGTCCCCTGCCTCCATTTCTATAGGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CAA 90 bp AGGAGTGGGGCAGGGTTCATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: RSGAGFMDLYLRAAYPELLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...TAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCATGAACCCTGCCCCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAGGTCCCGTGGCCTGGTaGTGCCCTCACACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIGPVAW*CPHTGY
Trigger: ATACCCTGTGTGAGGGCACAACCAGGCCACGGGACC...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: WTFTSEQLTLSYTHISRIPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...AATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGACCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTACCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: YPELYPHLKDLGASRSHLPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATTCTCCTCCCCATATAGGTaGTTACCTCCACCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ISSNVRRITWMFLASSSFSSPYR*LPPPSL
Trigger: GAGAGAGGGTGGAGGTAACAACCTATATGGGGAGGA...GAATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACACACAGGGTATGGGTaGTCCAGGACTGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIHTGYG*SRTATP
Trigger: GGGAGTGGCAGTCCTGGACAACCCATACCCTGTGTG...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTCAGCTGTTTGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: DLLHEDVGGPLLTVLQLFVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...AAACAGCTGAAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTCATCTACTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: YPELYPHLKDLGASRSHLLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...TAGATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CATGGATGTTCCTGGCCAGTAGCTCATTCTCTATGGCACGCTGGTCAAATATGTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: HGCSWPVAHSLWHAGQICILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...ACATATTTGACCAGCGTGCCATAGAGAATGAGCTACTGGCCAGGAACATCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp TACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: YPSIKTLEVFRRIPLRRAILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...AGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCCCTCTCCTCACTGTCCTTTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LRFDLLHEDVGGPLLTVLLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...AAGGACAGTGAGGAGAGGGCCTCCTACATCCTCATGGAGAAGATCGAACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643443.1
ENST00000645408.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATGGAACAGTGTTTGTCTaGATCACTTCTCTACCTAGT +
Preference number: 5 (lower is better)
Translates to: EQLTLSYTHISRIWGRLDGTVFV*ITSLPS
Trigger: ACTAGGTAGAGAAGTGATCAAGACAAACACTGTTCC...ATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp CAAACCATGTGTTCTGAGTCCTCTTGGTGCTATTTGGAGTTTCCTTCACGGTTGCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: QTMCSESSWCYLEFPSRLPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGACTCAGAACACATGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642498.1
CDS-3UTR CAA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCCACATCTCAAGGATTaGGGGGCGTCTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNPHLKD*GASRSH
Trigger: ATGAGATCTAGACGCCCCCAAATCCTTGAGATGTGG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GGAACACAGTCTGGGCAATGCCCTCTTTTAGGACTTGCTTGTGGATGTCAAAGAGTAAAGTCATCCTGTTaGATGGTGCTCCGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GTQSGQCPLLGLACGCQRVKSSC*MVLRGS
Trigger: ACTTCCTCGGAGCACCATCAAACAGGATGACTTTAC...TCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642493.1
CDS-3UTR CAA 90 bp AGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RWKAGGRYQYLPFHKNFGKQPSV*VQRPLF
Trigger: GAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTT...TCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LFRDIFKCSSDHMDVPGQRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...CTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TGTGACCTCTCCAGCAGTAGACGTGCTTCCCAATTACAAACAGCCTTCGGTCTTGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: CDLSSSRRASQLQTAFGLVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...AAGACCGAAGGCTGTTTGTAATTGGGAAGCACGTCTACTGCTGGAGAGGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS-3UTR CAA 90 bp CAGGCAATTCTCAAAAGGCTCAGGTTCGATCTTCTCCATGAGGATGTAGGAGGCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: QAILKRLRFDLLHEDVGGSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...GCCTCCTACATCCTCATGGAGAAGATCGAACCTGAGCCTTTTGAGAATTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACCTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTGGGGGCGTCTAGATCTTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: AAYPELYPHLKDLGASRSLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...AGATCTAGACGCCCCCAAATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS GCA 90 bp TCTCCATACAACCAGAATAGAATTTGTTGTTGTCTCCCACAAATCTaGTTCTTCTCTGATGAACCCCACCCAGGTACCCAAGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SPYNQNRICCCLPQI*FFSDEPHPGTQALS
Trigger: ACTCAAGGCTTGGGTACCTGGGTGGGGTTCATCAGAGAAGAAGCAGATTTGTGGGAGACAACAACAAATTCTATTCTGGTTGTATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 90 bp CTCTACACAGAGATTAGAGGTACCAGCAAACACTCCCAAGCCCAGTaGAATCATTCTTCTGGTCATCCTAGAATTGGTCACTGGGATAAA +
Preference number: 5 (lower is better)
Translates to: LYTEIRGTSKHSQAQ*NHSSGHPRIGHWDK
Trigger: TTTATCCCAGTGACCAATTCTAGGATGACCAGAAGAATGATTCCACTGGGCTTGGGAGTGTTTGCTGGTACCTCTAATCTCTGTGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS-3UTR CAA 90 bp ACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: TSIYPSIKTLEVFRRIPLRCPTC*FITSVF
Trigger: AAAGACACTCGTGATGAACAAGCACGTGGGGCATCT...GAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATAGCATGCTCGATGGCTTaGGTTCGAAGTAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRIACSMA*VRSRCP
Trigger: GGGGCATCTACTTCGAACCAAAGCCATCGAGCATGC...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000645328.1
ENST00000646405.1
ENST00000646735.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGGCTAGGAGAGTAAAGTCATCCTGTTaGATGGTGCTGGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: SIKTLEVFRRIPLRRARRVKSSC*MVLERV
Trigger: AACTCTTTCCAGCACCATCAAACAGGATGACTTTAC...TCTCCTAGCCCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTTCCCAATTCTGTAGACTGTACTGACGAGGCATGTAGCCATCCCGGAAGTAAATCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: LPNSVDCTDEACSHPGSKSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...TTTACTTCCGGGATGGCTACATGCCTCGTCAGTACAGTCTACAGAATTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642538.1
ENST00000643443.1
CDS-3UTR CAA 90 bp CCTTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCACTGGCAGAGATGGTGTaGATTTCGATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PFQRYLQMFVGSHGCSWPLAEMV*ISICFR
Trigger: CCTGAAACAGATCGAAATCAACACCATCTCTGCCAG...TGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp TATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATTCTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: YLQMFVGSHGCSWPVAHSILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...AGAATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp AGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: RYLQMFVGSHGCSWPVAHILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...ATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp GTCCTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: VLRWKAGGRYQYLPFHKNSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...GTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTG +
Preference number: 5 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFILPAS*VLLRTL
Trigger: CAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGAT...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp ATGGACCTTTACCTCAGAGCAGCTTACCCTGAGCTATACCCACATCTCAAGGATTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: MDLYLRAAYPELYPHLKDLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...ATCCTTGAGATGTGGGTATAGCTCAGGGTAAGCTGCTCTGAGGTAAAGGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp CTGGGTAACTGTCTATACCAAGAAAGTGCTAGGATTTTAGAGTCTCTATGCCTCTCCTCTTGGTGCTATTaGGAGTTTCCTTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: LGNCLYQESARILESLCLSSWCY*EFPSRL
Trigger: CAACCGTGAAGGAAACTCCAAATAGCACCAAGAGGA...GAGGCATAGAGACTCTAAAATCCTAGCACTTTCTTGGTATAGACAGTTACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642498.1
ENST00000642538.1
CDS-3UTR CAA 90 bp ATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATACCCCTCAGGAGGTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: IYPSIKTLEVFRRIPLRRSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...CCTCCTGAGGGGTATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGCCAAGCCTTGAGTACTaGTTTCCTACATCTCACTCT +
Preference number: 5 (lower is better)
Translates to: SDGKLGEGTSIYPSIKTLPSLEY*FPTSHS
Trigger: AGAGTGAGATGTAGGAAACAAGTACTCAAGGCTTGG...CAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644793.1
CDS-3UTR CAA 90 bp TTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTATCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: FQRYLQMFVGSHGCSWPVSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...TACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp TTTTCAGAGATATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: FSEISSNVRRITWMFLASSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...ACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATATCTCTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000642538.1
ENST00000643443.1
ENST00000646405.1
CDS-3UTR CAA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFSFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TATCTTCAAATGTTCGTCGGATCACATGGATGTTCCTGGCCAGTAGCTCATTCTTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: YLQMFVGSHGCSWPVAHSLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...AGAATGAGCTACTGGCCAGGAACATCCATGTGATCCGACGAACATTTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646405.1
ENST00000646766.1
CDS-3UTR CAA 90 bp CTCAGATGGAAAGCTGGGGGAAGGTACCAGTATTTACCCTTCCATAAAAACTTTTTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LRWKAGGRYQYLPFHKNFLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...AAAGTTTTTATGGAAGGGTAAATACTGGTACCTTCCCCCAGCTTTCCATCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS-3UTR CAA 90 bp TTATTAGAGAGGATCTTGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LLERILPASLVLLRTLRTLLERI*PASLVL
Trigger: TAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA...TGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642493.1
ENST00000643443.1
ENST00000646766.1
CDS-3UTR CAA 90 bp GAAGGTACCAGTATTTACCCTTCCATAAAAACTTTGGAGGTCTTTAGGAGGATATCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGA +
Preference number: 5 (lower is better)
Translates to: EGTSIYPSIKTLEVFRRISFRTC*WMSKRR
Trigger: TCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGA...TATCCTCCTAAAGACCTCCAAAGTTTTTATGGAAGGGTAAATACTGGTACCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642498.1
ENST00000643188.1
ENST00000643502.1
ENST00000644793.1
ENST00000646405.1
ENST00000651619.1
CDS CCA 72 bp AGGCCCCGAGGCAACGACACGGTCGGCTGCCCAGGCTaGCCCCACTTCACGGGCCCGCTCGCTTCCACCCTG +
Preference number: 6 (lower is better)
Translates to: RPRGNDTVGCPG*PHFTGPLASTL
Trigger: CAGGGTGGAAGCGAGCGGGCCCGTGAAGTGGGGCCAGCCTGGGCAGCCGACCGTGTCGTTGCCTCGGGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp TGCCTGGAAAGGCCCCGAGGCAACGACACGGTCGGCTaGCCAGGCTGGCCCCACTTCACGGGCCCGCTCGCT +
Preference number: 6 (lower is better)
Translates to: CLERPRGNDTVG*PGWPHFTGPLA
Trigger: AGCGAGCGGGCCCGTGAAGTGGGGCCAGCCTGGGCAGCCGACCGTGTCGTTGCCTCGGGGCCTTTCCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS TCA 72 bp TTTGGCGCTGAGTCGAGGCCAGGAAGGGGCGGTCGATaGGAGGGCGGCCTTAGCATTAGGAGTGCGTCGGCT +
Preference number: 6 (lower is better)
Translates to: FGAESRPGRGGR*EGGLSIRSASA
Trigger: AGCCGACGCACTCCTAATGCTAAGGCCGCCCTCTCATCGACCGCCCCTTCCTGGCCTCGACTCAGCGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643188.1
CDS GCA 72 bp AGCAATACTCCCTCAGCCAGGGCCCGGTCCACGGCCTaGCGTGCCAGCTCCTCTAGCTGCTGTTTATCCTGC +
Preference number: 6 (lower is better)
Translates to: SNTPSARARSTA*RASSSSCCLSC
Trigger: GCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGGCCGTGGACCGGGCCCTGGCTGAGGGAGTATTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000451957.2
ENST00000642493.1
ENST00000642498.1
ENST00000642538.1
ENST00000643188.1
ENST00000643203.1
ENST00000643271.1
ENST00000643443.1
ENST00000643628.1
ENST00000643908.1
ENST00000644197.1
ENST00000644793.1
ENST00000645102.1
ENST00000645723.1
ENST00000646405.1
ENST00000646502.1
ENST00000646735.1
ENST00000646766.1
ENST00000651619.1
CDS GCA 72 bp GTGCGCGCCAGCCCAACCCCCTCACTAGACACTAGTTaGCCCGCTCCTACGAAGGGTTTCAGCCACAAGGTC +
Preference number: 6 (lower is better)
Translates to: VRASPTPSLDTS*PAPTKGFSHKV
Trigger: GACCTTGTGGCTGAAACCCTTCGTAGGAGCGGGGCAACTAGTGTCTAGTGAGGGGGTTGGGCTGGCGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp GCTCCAGCAGGGCACTGCCGTGCCAGCTCCTCTAGCTaGTGTTTATCCTGCAAGAGGCTCCCCCAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: APAGHCRASSSS*CLSCKRLPQLV
Trigger: CACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAGAGGAGCTGGCACGGCAGTGCCCTGCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643690.1
CDS CAA 90 bp CTGGCCCCACTTCACGGGCCCGCTCGCTTCCACCCTGGACAAAGTTaGGCCCTAATCGCTCCCCGTTGTAGCTCTAACTGGCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: LAPLHGPARFHPGQS*ALIAPRCSSNWLQS
Trigger: AGACTGGAGCCAGTTAGAGCTACAACGGGGAGCGATTAGGGCCAAACTTTGTCCAGGGTGGAAGCGAGCGGGCCCGTGAAGTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp AAATCGGTCGCACTTTATCGCCAGGACTTAGGCCAGTaGCTGGAAAGGCCCCGAGGCAACGACACGGTCGGC +
Preference number: 6 (lower is better)
Translates to: KSVALYRQDLGQ*LERPRGNDTVG
Trigger: GCCGACCGTGTCGTTGCCTCGGGGCCTTTCCAGGCACTGGCCTAAGTCCTGGCGATAAAGTGCGACCGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644793.1
ENST00000645723.1
ENST00000646502.1
CDS CCA 72 bp GCTGCTGTTTATCCTGCAAGAGGCTCCCCCAGTTGGTaGCCATCCCAACACCATGGGCCAGGTGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AAVYPARGSPSW*PSQHHGPGVVA
Trigger: AGCCACCACACCTGGCCCATGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644608.1
ENST00000646502.1
CDS TCA 72 bp TGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAACACAGTCTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: WGAICAALEHVV*AIQAQEHSLWG
Trigger: TCCCCACAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643908.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS TCA 72 bp GAGGCTCCCCCAGTTGGTGGCCATCCCAACACCTTGTaGTCCACACGCCTCGACCTCCCAAAGTACTGGGAT +
Preference number: 6 (lower is better)
Translates to: EAPPVGGHPNTL*STRLDLPKYWD
Trigger: ATCCCAGTACTTTGGGAGGTCGAGGCGTGTGGATCACAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643271.1
CDS CCA 72 bp CTAGCTGCTGTTTATCCTGCAAGAGGCTCCCCCAGTTaGTGGCCATCCCAACACCATGGGCCAGGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: LAAVYPARGSPS*WPSQHHGPGVV
Trigger: CACCACACCTGGCCCATGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644608.1
ENST00000646502.1
CDS CCA 72 bp GGCAGAGATGGTGTTGATTTCGATCTGTTTCAGGGCTaGGGAGCCATCTGCGCTGCGCTGGGCAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: GRDGVDFDLFQG*GAICAALGNAL
Trigger: GAGGGCATTGCCCAGCGCAGCGCAGATGGCTCCCCAGCCCTGAAACAGATCGAAATCAACACCATCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643502.1
CDS CAA 72 bp CTTCACGGGCCCGCTCGCTTCCACCCTGGACAAAGTTaGGCCCTAATCGCTCCCCGTTGTAGCTCTAACTGG +
Preference number: 6 (lower is better)
Translates to: LHGPARFHPGQS*ALIAPRCSSNW
Trigger: CCAGTTAGAGCTACAACGGGGAGCGATTAGGGCCAAACTTTGTCCAGGGTGGAAGCGAGCGGGCCCGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CAA 72 bp TCCCCCTTCCAGGACTTGGCACGTGCTGTCTTCTCTTaGGAACTCTCGCCACCACTCCTGATCTGGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SPFQDLARAVFS*ELSPPLLIWAR
Trigger: GCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CAA 90 bp TGGCCTCTGTCCCCCTTCCAGGACTTGGCACGTGCTGTCTTCTCTTaGGAACTCTCGCCACCACTCCTGATCTGGGCTCGCGATTTCGTT +
Preference number: 6 (lower is better)
Translates to: WPLSPFQDLARAVFS*ELSPPLLIWARDFV
Trigger: AACGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp GCTAGGGCTCTGGCTGACTCACCTCTCTGTCCTCAGTaGCTACAATGGCCCGGCATAGAGCAGGCATTTGGT +
Preference number: 6 (lower is better)
Translates to: ARALADSPLCPQ*LQWPGIEQAFG
Trigger: ACCAAATGCCTGCTCTATGCCGGGCCATTGTAGGCACTGAGGACAGAGAGGTGAGTCAGCCAGAGCCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643628.1
CDS CCA 72 bp AGTTTGGCCCTAATCGCTCCCCGTTGTAGCTCTAACTaGCTCCAGTCTCACTGGCCTACATGCCCCGACACC +
Preference number: 6 (lower is better)
Translates to: SLALIAPRCSSN*LQSHWPTCPDT
Trigger: GGTGTCGGGGCATGTAGGCCAGTGAGACTGGAGCCAGTTAGAGCTACAACGGGGAGCGATTAGGGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 72 bp GCTGCTGTTTATCCTGCAAGAGGCTCCCCCAGTTGGTaGCCATCCCAACACCTTGTGATCCACACGCCTCGA +
Preference number: 6 (lower is better)
Translates to: AAVYPARGSPSW*PSQHLVIHTPR
Trigger: TCGAGGCGTGTGGATCACAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643271.1
CDS TCA 72 bp GTGCTGTCTTCTCTTTGGAACTCTCGCCACCACTCCTaGTCTGGGCTCGCGATTTCGTTCCGGAAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: VLSSLWNSRHHS*SGLAISFRKLS
Trigger: GGACAGCTTCCGGAACGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS TCA 72 bp TGGGGAGCCATCTGCGCTGCGCTGGAACATGTAGTCTaGGCGATTCAGGCCCAGGAACACAGTCTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: WGAICAALEHVV*AIQAQEHSLER
Trigger: TCTTTCCAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAGATGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS GCA 72 bp CACAGTCTGTGGGGAAAACTGAAGGCTGACAGTACCTaGCCAGGGACTGACTCTGAGGACCTAGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: HSLWGKLKADST*PGTDSEDLATE
Trigger: CTCTGTGGCTAGGTCCTCAGAGTCAGTCCCTGGGCAGGTACTGTCAGCCTTCAGTTTTCCCCACAGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643908.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CCA 72 bp CTAGCTGCTGTTTATCCTGCAAGAGGCTCCCCCAGTTaGTGGCCATCCCAACACCTTGTGATCCACACGCCT +
Preference number: 6 (lower is better)
Translates to: LAAVYPARGSPS*WPSQHLVIHTP
Trigger: AGGCGTGTGGATCACAAGGTGTTGGGATGGCCACCAACTGGGGGAGCCTCTTGCAGGATAAACAGCAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643271.1
CDS CAA 90 bp TCTTCAGTGACCAGGATATGTTGGCCTCTGTCCCCCTTCCAGGACTaGGCACGTGCTGTCTTCTCTTTGGAACTCTCGCCACCACTCCTG +
Preference number: 6 (lower is better)
Translates to: SSVTRICWPLSPFQD*ARAVFSLELSPPLL
Trigger: CAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCAACATATCCTGGTCACTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CAA 90 bp GGTGGCCATCCCAACACCCGAGGTGATGACTGGTATAGCCTGGACTaGAACCCATGTCTCTGGACTCCCAGCCTAAAGGCTCTTCATTGG +
Preference number: 6 (lower is better)
Translates to: GGHPNTRGDDWYSLD*NPCLWTPSLKALHW
Trigger: CCAATGAAGAGCCTTTAGGCTGGGAGTCCAGAGACATGGGTTCAAGTCCAGGCTATACCAGTCATCACCTCGGGTGTTGGGATGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645102.1
CDS CCA 72 bp GTCTTCTCTTTGGAACTCTCGCCACCACTCCTGATCTaGGCTCGCGATTTCGTTCCGGAAGCTGTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: VFSLELSPPLLI*ARDFVPEAVPV
Trigger: AACAGGGACAGCTTCCGGAACGAAATCGCGAGCCCAGATCAGGAGTGGTGGCGAGAGTTCCAAAGAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 72 bp CCAGTTGGTGGCCATCCCAACACCCGAGGTGATGACTaGTATAGCCTGGACTTGAACCCATGTCTCTGGACT +
Preference number: 6 (lower is better)
Translates to: PVGGHPNTRGDD*YSLDLNPCLWT
Trigger: AGTCCAGAGACATGGGTTCAAGTCCAGGCTATACCAGTCATCACCTCGGGTGTTGGGATGGCCACCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645102.1
CDS CAA 72 bp GATTCAGAGTCAGGTGTCTTCAGTGACCAGGATATGTaGGCCTCTGTCCCCCTTCCAGGACTTGGCACGTGC +
Preference number: 6 (lower is better)
Translates to: DSESGVFSDQDM*ASVPLPGLGTC
Trigger: GCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCAACATATCCTGGTCACTGAAGACACCTGACTCTGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp AGGCAGGAGAATCGCTTGAAACTGGAAGTCAAAGGTTaGAGTGAGCCGAGATCGCACCACTGTACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENRLKLEVKG*SEPRSHHCTPA
Trigger: GGCTGGAGTACAGTGGTGCGATCTCGGCTCACTGCAACCTTTGACTTCCAGTTTCAAGCGATTCTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646502.1
CDS CCA 72 bp GCACTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATC +
Preference number: 6 (lower is better)
Translates to: ALERVCSRKAAF*LTASTSRLKSI
Trigger: GATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451957.2
ENST00000646735.1
CDS CCA 72 bp GTGCTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATC +
Preference number: 6 (lower is better)
Translates to: VLERVCSRKAAF*LTASTSRLKSI
Trigger: GATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000642498.1
ENST00000642538.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000644793.1
ENST00000645102.1
ENST00000645723.1
ENST00000646405.1
ENST00000646497.1
ENST00000646502.1
ENST00000646512.1
ENST00000651619.1
CDS CCA 72 bp ATTCAGAGTCAGGTGTCTTCAGTGACCAGGATATGTTaGCCTCTGTCCCCCTTCCAGGACTTGGCACGTGCT +
Preference number: 6 (lower is better)
Translates to: IQSQVSSVTRIC*PLSPFQDLARA
Trigger: AGCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCAACATATCCTGGTCACTGAAGACACCTGACTCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 72 bp AGGGCCTCGGCGATGGCCTGGTCCCCTTCTTCACCCTaGCAGGAGGCAGAAAGCAGTTATCAAAAGTTTAAA +
Preference number: 6 (lower is better)
Translates to: RASAMAWSPSSP*QEAESSYQKFK
Trigger: TTTAAACTTTTGATAACTGCTTTCTGCCTCCTGCCAGGGTGAAGAAGGGGACCAGGCCATCGCCGAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644694.1
CDS CAA 90 bp CGTGAAACAGATTCAGAGTCAGGTGTCTTCAGTGACCAGGATATGTaGGCCTCTGTCCCCCTTCCAGGACTTGGCACGTGCTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: RETDSESGVFSDQDM*ASVPLPGLGTCCLL
Trigger: GAGAAGACAGCACGTGCCAAGTCCTGGAAGGGGGACAGAGGCCAACATATCCTGGTCACTGAAGACACCTGACTCTGAATCTGTTTCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS GCA 72 bp TGCTCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTaGTTGTTCATCACGAGTGTCTTTTCCTGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: CSMALVRSRCPT*LFITSVFSCLH
Trigger: GTGGAGGCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645328.1
CDS CCA 72 bp GAAAACAAACAGAGATGGGAGGGACAGGTTACAGACTaGAGTAGGGCTGGGAATGGTTACCTGGGCAATGCC +
Preference number: 6 (lower is better)
Translates to: ENKQRWEGQVTD*SRAGNGYLGNA
Trigger: GGCATTGCCCAGGTAACCATTCCCAGCCCTACTCCAGTCTGTAACCTGTCCCTCCCATCTCTGTTTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CCA 72 bp AGTCTGGAAAGAGTTTGCTCCAGGAAGGCAGCGTTCTaGCTGACAGCATCCACTAGCAGGTTGAAGTCCATC +
Preference number: 6 (lower is better)
Translates to: SLERVCSRKAAF*LTASTSRLKSI
Trigger: GATGGACTTCAACCTGCTAGTGGATGCTGTCAGCCAGAACGCTGCCTTCCTGGAGCAAACTCTTTCCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646766.1
CDS CAA 72 bp TCGATGGCTTTGGTTCGAAGTAGATGCCCCACGTGCTaGTTCATCACGAGTGTCTTTTCCTGCCTCCACCCT +
Preference number: 6 (lower is better)
Translates to: SMALVRSRCPTC*FITSVFSCLHP
Trigger: AGGGTGGAGGCAGGAAAAGACACTCGTGATGAACAAGCACGTGGGGCATCTACTTCGAACCAAAGCCATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645328.1
CDS CAA 90 bp GCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTTGCCAGCTTCTTaGGTCTTACTCAGGACACTGAGAACATGTCTGGGCAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: ASPLLGLLERILPAS*VLLRTLRTCLGNAL
Trigger: GAGGGCATTGCCCAGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS GCA 72 bp GCACCAGAGCACTGGGCAATGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGACGAGCGGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: APEHWAMPSFRT*LWMSKRRAVKS
Trigger: TGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGTGCTCTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS CCA 72 bp AGGTTACAGACTGGAGTAGGGCTGGGAATGGTTACCTaGGCAATGCCCTCTTTTAGGACTTGCTTGTGGATG +
Preference number: 6 (lower is better)
Translates to: RLQTGVGLGMVT*AMPSFRTCLWM
Trigger: CATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCATTCCCAGCCCTACTCCAGTCTGTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CAA 72 bp CCAGAGCACTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: PEHWAMPSFRTC*WMSKRRAVKSS
Trigger: GGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS CAA 90 bp GGGCTGGGAATGGTTACCTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCCTGTTTGATG +
Preference number: 6 (lower is better)
Translates to: GLGMVTWAMPSFRTC*WMSKRRAVKSSCLM
Trigger: CATCAAACAGGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCATTCCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CAA 90 bp AGGCCCAGGAACACAGTCTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCCTGTTTGATG +
Preference number: 6 (lower is better)
Translates to: RPRNTVWAMPSFRTC*WMSKRRAVKSSCLM
Trigger: CATCAAACAGGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTTCCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000642493.1
ENST00000642498.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000644793.1
ENST00000646497.1
ENST00000646502.1
ENST00000651619.1
CDS CAA 90 bp GCAATTCCCAGGGCCAGTCCCTTGCTGGGATTATTAGAGAGGATCTaGCCAGCTTCTTTGGTCTTACTCAGGACACTGAGAACATGTCTG +
Preference number: 6 (lower is better)
Translates to: AIPRASPLLGLLERI*PASLVLLRTLRTCL
Trigger: CAGACATGTTCTCAGTGTCCTGAGTAAGACCAAAGAAGCTGGCAAGATCCTCTCTAATAATCCCAGCAAGGGACTGGCCCTGGGAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS CAA 90 bp TCAGTAGCACCAGAGCACTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCCTGTTTGATG +
Preference number: 6 (lower is better)
Translates to: SVAPEHWAMPSFRTC*WMSKRRAVKSSCLM
Trigger: CATCAAACAGGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGTGCTCTGGTGCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642538.1
CDS GCA 72 bp GGAATGGTTACCTGGGCAATGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGACGAGCGGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: GMVTWAMPSFRT*LWMSKRRAVKS
Trigger: TGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS GCA 72 bp AGGAACACAGTCTGGGCAATGCCCTCTTTTAGGACTTaGTTGTGGATGTCAAAGAGACGAGCGGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: RNTVWAMPSFRT*LWMSKRRAVKS
Trigger: TGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000642493.1
ENST00000642498.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000644793.1
ENST00000646497.1
ENST00000646502.1
ENST00000651619.1
CDS CAA 72 bp ATGGTTACCTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: MVTWAMPSFRTC*WMSKRRAVKSS
Trigger: GGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGGTAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CAA 72 bp AAGCCCAGTGGAATCATTCTTCTGGTCATCCTAGAATaGGTCACTGGGATAAACCCAGTGAGGACCAGTGAG +
Preference number: 6 (lower is better)
Translates to: KPSGIILLVILE*VTGINPVRTSE
Trigger: CTCACTGGTCCTCACTGGGTTTATCCCAGTGACCAATTCTAGGATGACCAGAAGAATGATTCCACTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643690.1
ENST00000643908.1
ENST00000644197.1
ENST00000644538.1
ENST00000645723.1
ENST00000646512.1
CDS CAA 72 bp TTCTTCTCTGATGAACCCCACCCAGGTACCCAAGCCTaGAGTACTTGTTTCCTACATCTCACTCTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: FFSDEPHPGTQA*STCFLHLTLPK
Trigger: TTTGGGGAGAGTGAGATGTAGGAAACAAGTACTCAAGGCTTGGGTACCTGGGTGGGGTTCATCAGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CAA 72 bp AACACAGTCTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: NTVWAMPSFRTC*WMSKRRAVKSS
Trigger: GGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000642493.1
ENST00000642498.1
ENST00000643188.1
ENST00000643271.1
ENST00000643443.1
ENST00000644793.1
ENST00000646497.1
ENST00000646502.1
ENST00000651619.1
CDS CAA 72 bp GAACATGTCTGGGCAATGCCCTCTTTTAGGACTTGCTaGTGGATGTCAAAGAGACGAGCGGTAAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: EHVWAMPSFRTC*WMSKRRAVKSS
Trigger: GGATGACTTTACCGCTCGTCTCTTTGACATCCACAAGCAAGTCCTAAAAGAGGGCATTGCCCAGACATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646405.1
CDS CAA 90 bp CAAATCTGCTTCTTCTCTGATGAACCCCACCCAGGTACCCAAGCCTaGAGTACTTGTTTCCTACATCTCACTCTCCCCAAATCCTATGGA +
Preference number: 6 (lower is better)
Translates to: QICFFSDEPHPGTQA*STCFLHLTLPKSYG
Trigger: TCCATAGGATTTGGGGAGAGTGAGATGTAGGAAACAAGTACTCAAGGCTTGGGTACCTGGGTGGGGTTCATCAGAGAAGAAGCAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644793.1
ENST00000645723.1
CDS CCA 72 bp CAGCAATTTCCTGGCCATCCAAACAGCCTTCGGTCTTaGTCCAGAGACCCCTTTTCAGAGATATCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: QQFPGHPNSLRS*SRDPFSEISSN
Trigger: ATTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGGATGGCCAGGAAATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646497.1
CDS CCA 72 bp GGATGTTCAGAGCATGGACTCAGGAGCCAAATTCCTTaGGTTCACATCCTGGCTCTGCCAATTATTTTACCA +
Preference number: 6 (lower is better)
Translates to: GCSEHGLRSQIP*VHILALPIILP
Trigger: TGGTAAAATAATTGGCAGAGCCAGGATGTGAACCCAAGGAATTTGGCTCCTGAGTCCATGCTCTGAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643628.1
CDS CAA 72 bp ACAGCAATTTCCTGGCCATCCAAACAGCCTTCGGTCTaGGTCCAGAGACCCCTTTTCAGAGATATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: TAISWPSKQPSV*VQRPLFRDIFK
Trigger: TTTGAAGATATCTCTGAAAAGGGGTCTCTGGACCAAGACCGAAGGCTGTTTGGATGGCCAGGAAATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646497.1
CDS CAA 72 bp TGGATGTTCAGAGCATGGACTCAGGAGCCAAATTCCTaGGGTTCACATCCTGGCTCTGCCAATTATTTTACC +
Preference number: 6 (lower is better)
Translates to: WMFRAWTQEPNS*GSHPGSANYFT
Trigger: GGTAAAATAATTGGCAGAGCCAGGATGTGAACCCAAGGAATTTGGCTCCTGAGTCCATGCTCTGAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643628.1