RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSR (Homo sapiens)

Ensembl gene IDs: ENSG00000104687

Ensembl transcript IDs: ENST00000221130.11, ENST00000521479.1, ENST00000523295.5, ENST00000537535.5, ENST00000541648.5, ENST00000546342.5, ENST00000643525.1, ENST00000643653.1

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGTTCTCAACGAAGTGTGACCAGCTCTTCTGAAGAGGTAGGGTaGATGGCGACTGTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATC +
Preference number: 1 (lower is better)
Translates to: PGSQRSVTSSSEEVG*MATVLSKSAFVAPI
Trigger: GATGGGAGCAACGAAGGCAGACTTTGACAACACAGTCGCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACACTTCGTTGAGAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 90 bp GCCACACGTGTCTCCTGGTTCTCAACGAAGTGTGACCAGCTCTTCTaGAGAGGTAGGGTGAATGGCGACTGTGTTGTCAAAGTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: ATRVSWFSTKCDQLF*RGRVNGDCVVKVCL
Trigger: AAGGCAGACTTTGACAACACAGTCGCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACACTTCGTTGAGAACCAGGAGACACGTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR CCA 90 bp CCTTGTCATCGGTTTGAATCCCCAGTTTGTTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGCAGTCAACAT +
Preference number: 1 (lower is better)
Translates to: PCHRFESPVCLNSGP*YSGPAQWPRAGSQH
Trigger: ATGTTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGGGGATTCAAACCGATGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR GCA 90 bp AGAGGTAGGGTGAATGGCGACTGTGTTGTCAAAGTCTGCCTTCGTTaGTCCCATCTTCACTGCAACAGCAAAACCCTGCAGCATTTCATC +
Preference number: 1 (lower is better)
Translates to: RGRVNGDCVVKVCLR*SHLHCNSKTLQHFI
Trigger: GATGAAATGCTGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTCGCCATTCACCCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR GCA 90 bp TTTCCCACTGACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGAAAGAATAATGGAACC +
Preference number: 1 (lower is better)
Translates to: FPTDLYCGLGITREG*MATDDFYMGKNNGT
Trigger: GGTTCCATTATTCTTTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR CCA 90 bp CCACTGACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATATGGGAAAGAATAATGGAACCATGT +
Preference number: 1 (lower is better)
Translates to: PLTSIVGLGSLVKAA*PRMISIWERIMEPC
Trigger: ACATGGTTCCATTATTCTTTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 90 bp TTAGCAGAGGAAGGGACTTTTGATGTATTTGAATCCACCTCCTTCTaGAAGCAGGAATCACTTCTAAATGTCTCTCATATCTTTCTTCAA +
Preference number: 1 (lower is better)
Translates to: LAEEGTFDVFESTSF*KQESLLNVSHIFLQ
Trigger: TTGAAGAAAGATATGAGAGACATTTAGAAGTGATTCCTGCTTTCAGAAGGAGGTGGATTCAAATACATCAAAAGTCCCTTCCTCTGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
3UTR CCA 90 bp TGGAACCATGTAAGCATGATTACAAAGTGGAATGCTTTAACATATTaGAACGTGCTTGATTCTGAATTGAGTTATCTTCTTCTTTCCCTG +
Preference number: 1 (lower is better)
Translates to: WNHVSMITKWNALTY*NVLDSELSYLLLSL
Trigger: CAGGGAAAGAAGAAGATAACTCAATTCAGAATCAAGCACGTTCCAATATGTTAAAGCATTCCACTTTGTAATCATGCTTACATGGTTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp TATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAAGTGTGACCCTGGAATCATGGTCATaGCTGGTAGCCTACCGGGAA +
Preference number: 2 (lower is better)
Translates to: YGSHCPPHVSPGSQRSVTLESWS*LVAYRE
Trigger: TTCCCGGTAGGCTACCAGTCATGACCATGATTCCAG...GGTCACACTTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp GTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAAACCCTCGGGACCCGCCCAATaGCCCAGAGCAGGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: VLSKSAFVAPIFTATAKPSGPAQ*PRAGSQ
Trigger: TTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGA...GGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp TATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAAGTGTGACCCAGGCAGTCAACATCTaGAATCATGGTCATGACTGG +
Preference number: 2 (lower is better)
Translates to: YGSHCPPHVSPGSQRSVTQAVNI*NHGHDW
Trigger: CCAGTCATGACCATGATTCCAGATGTTGACTGCCTG...GGTCACACTTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp CCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGACTGAAGGTGGGAGTTTaGGACCAGCCTGACCAACAT +
Preference number: 2 (lower is better)
Translates to: PVCLNSGPWYSGPAQWPRLKVGV*DQPDQH
Trigger: ATGTTGGTCAGGCTGGTCTCAAACTCCCACCTTCAG...TCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp CGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTGGCTCTCATGAGGGGTaGAGGGCATACCACCTGTGG +
Preference number: 2 (lower is better)
Translates to: RWASFRPAAIATGVRRAFGSHEG*RAYHLW
Trigger: CCACAGGTGGTATGCCCTCCACCCCTCATGAGAGCC...AAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGAGGGATCTGGCTCTCATaGGGGGTGGAGGGCATACCA +
Preference number: 2 (lower is better)
Translates to: KSRWASFRPAAIATGVRRGIWLS*GVEGIP
Trigger: TGGTATGCCCTCCACCCCTCATGAGAGCCAGATCCC...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp GACTGTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAACTTAGAACCCAGGGCTaGCAGGATCCCTGCCATCTC +
Preference number: 2 (lower is better)
Translates to: DCVVKVCLRCSHLHCNSKLRTQG*QDPCHL
Trigger: GAGATGGCAGGGATCCTGTCAGCCCTGGGTTCTAAG...TTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR CAA 90 bp ATGTGTGGGGCGGTGTACTTTTTCCCACTGACCTCTATTGTGGGCTaGGGATCACTCGTGAAGGCTGCATGGCCACGGATGATTTCTATA +
Preference number: 2 (lower is better)
Translates to: MCGAVYFFPLTSIVG*GSLVKAAWPRMISI
Trigger: TATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGGGAAAAAGTACACCGCCCCACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp CCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAGGAATTCGTCTACGATaGTATGACCCTTGTCATCGG +
Preference number: 2 (lower is better)
Translates to: PVCLNSGPWYSGPAQWPRGIRLR*YDPCHR
Trigger: CCGATGACAAGGGTCATATCATCGTAGACGAATTCC...TCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR TCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTGCTTGGGATCACTCGTaGAGGCTGCATGGCCACGGA +
Preference number: 2 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSAWDHS*RLHGHG
Trigger: TCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGC...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AGAAGATCTATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAACTGCATAGATGCCTTTaGCGTTGGTATTCTGGAATT +
Preference number: 2 (lower is better)
Translates to: RRSMGPTARHTCLLVLNELHRCL*RWYSGI
Trigger: AATTCCAGAATACCAACGTCAAAGGCATCTATGCAG...TTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATAGATCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGTCGGGACCCGCCCAATaGCCCAGAGCAGGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMSGPAQ*PRAGSQ
Trigger: TTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGA...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR GCA 90 bp TTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACATCTATGGGTCCCACTaGCCGCCACACGTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: FLIFKKSMGKFSASSYCNIYGSH*PPHVSP
Trigger: AGGAGACACGTGTGGCGGGCAGTGGGACCCATAGAT...GTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp GACTGTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAAATTTCAGAAGATCTATaGGTCCCACTGCCCGCCACA +
Preference number: 2 (lower is better)
Translates to: DCVVKVCLRCSHLHCNSKISEDL*VPLPAT
Trigger: TGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAAT...TTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AGAAGATCTATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAATGCTTGATTCTGAATTaGGTTATCTTCTTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: RRSMGPTARHTCLLVLNECLILN*VIFFFP
Trigger: GGGAAAGAAGAAGATAACTCAATTCAGAATCAAGCA...TTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATAGATCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR GCA 90 bp ACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCAGTCAGGCATGGTGGTaGGTGCCTGTAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: TYIPNCIDAFDVGILEFVSQAWW*VPVIPA
Trigger: AGCTGGAATTACAGGCACGCACCACCATGCCTGACT...GACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp TCTTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAGGCGATCAGGATGTGTaGGGCGGTGTACTTTTTCCC +
Preference number: 2 (lower is better)
Translates to: SSLYSKSRWASFRPAAIAGDQDV*GGVLFP
Trigger: GGGAAAAAGTACACCGCCCCACACATCCTGATCGCC...TGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGAGGCAGAGGTTGTGGTaGGCTGAAATAGCACCACCG +
Preference number: 2 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMRQRLW*AEIAPP
Trigger: CGGTGGTGCTATTTCAGCTCACCACAACCTCTGCCT...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp TGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCGGAATTCGTCTACGATaGTATGACCCTTGTCATCGG +
Preference number: 2 (lower is better)
Translates to: CNWSKKSFSTYIPNCIDAGIRLR*YDPCHR
Trigger: CCGATGACAAGGGTCATATCATCGTAGACGAATTCC...GGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR GCA 90 bp ACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTCGGCCAGCAGCTATTaGAACTGGAGTAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: TYIPNCIDAFDVGILEFVSASSY*NWSKKS
Trigger: GCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGA...GACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR GCA 90 bp CTTCTAAGTACCTTATCATGCCGTATCATCAGTGATGTCTTAGAACCCAGGGCTTCGGCCAGCAGCTATTaGAACTGGAGTAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: LLSTLSCRIISDVLEPRASASSY*NWSKKS
Trigger: GCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGA...AGCCCTGGGTTCTAAGACATCACTGATGATACGGCATGATAAGGTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR GCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTATCACTCGTGAAGGCTaGATGGCCACGGATGATTTC +
Preference number: 2 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSITREG*MATDDF
Trigger: GAAATCATCCGTGGCCATGCAGCCTTCACGAGTGAT...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTTTAACCTCCTTGACCTaGGAGAACTTCAGCACCTCC +
Preference number: 2 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSLTSLT*ENFSTS
Trigger: GGAGGTGCTGAAGTTCTCCCAGGTCAAGGAGGTTAA...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATA +
Preference number: 2 (lower is better)
Translates to: KSRWASFRPAAIATGVRRLVKAA*PRMISI
Trigger: TATAGAAATCATCCGTGGCCATGCAGCCTTCACGAG...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGGTGGGCGGATCACCTaGAGGTGGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHGGRIT*RWEFET
Trigger: GGTCTCAAACTCCCACCTTCAGGTGATCCGCCCACC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGACCGTGCAGTTGGTGCTaGTCATTGAATCAAAACTTC +
Preference number: 2 (lower is better)
Translates to: KSRWASFRPAAIATGVRRPCSWC*SLNQNF
Trigger: GAAGTTTTGATTCAATGATCAGCACCAACTGCACGG...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR TCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGCTGGAATCATGGTCATaGCTGGTAGCCTACCGGGAA +
Preference number: 2 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMLESWS*LVAYRE
Trigger: TTCCCGGTAGGCTACCAGTCATGACCATGATTCCAG...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR GCA 90 bp GACTGTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAACTAAGTACCTTATCATaGCGTATCATCAGTGATGTC +
Preference number: 2 (lower is better)
Translates to: DCVVKVCLRCSHLHCNSKLSTLS*RIISDV
Trigger: GACATCACTGATGATACGGCATGATAAGGTACTTAG...TTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATACAGGCAGTCAACATCTaGAATCATGGTCATGACTGG +
Preference number: 2 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCIQAVNI*NHGHDW
Trigger: CCAGTCATGACCATGATTCCAGATGTTGACTGCCTG...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAA +
Preference number: 2 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMLNSGP*YSGPAQ
Trigger: TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAA...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAGGCAGAGGTTGTGGTaGGCTGAAATAGCACCACCG +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHRQRLW*AEIAPP
Trigger: CGGTGGTGCTATTTCAGCTCACCACAACCTCTGCCT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR TCA 90 bp TGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGACCCCGTGCAGTTGGTGCTaGTCATTGAATCAAAACTTC +
Preference number: 2 (lower is better)
Translates to: CIDAFDVGILEFVYDDMTPCSWC*SLNQNF
Trigger: GAAGTTTTGATTCAATGATCAGCACCAACTGCACGG...GGTCATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGATGCCGTATCATCAGTaGTGTCTTAGAACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: ALFTCEELPSTSVKISKLMPYHQ*CLRTQG
Trigger: GCCCTGGGTTCTAAGACATCACTGATGATACGGCAT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCTGAAGGTGGGAGTTTaGGACCAGCCTGACCAACAT +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHLKVGV*DQPDQH
Trigger: ATGTTGGTCAGGCTGGTCTCAAACTCCCACCTTCAG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCCCTTGTCATCGGTTTaGATCCCCAGTTTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: ALFTCEELPSTSVKISKLPLSSV*IPSLFK
Trigger: TTTAAACAAACTGGGGATTCAAACCGATGACAAGGG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCTGCATGGCCACGGATaGTTTCTATATGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHLHGHG*FLYGKE
Trigger: TTCTTTCCCATATAGAAATCATCCGTGGCCATGCAG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATTCTTTCTTCAAGGAGTaGTTTTCCAGGAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSFFKE*FSRRFP
Trigger: TGGGAACCTCCTGGAAAACCACTCCTTGAAGAAAGA...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221130.11
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGGCACTGTTTACATGTaGAGAATTGCCATCAACTTC +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHGTVYM*RIAINF
Trigger: GAAGTTGATGGCAATTCTTCACATGTAAACAGTGCC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAAAATTAGTCAGGCATaGTGGTGCGTGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHKISQA*WCVPVI
Trigger: AATTACAGGCACGCACCACCATGCCTGACTAATTTT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAAAGGTTCTGTGCACTaGCACTGTTTACATGTGAAG +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHKGSVH*HCLHVK
Trigger: CTTCACATGTAAACAGTGCCAGTGCACAGAACCTTT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAGCAGCTATTGCAACTaGAGTAAGAAGAGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSSYCN*SKKSFS
Trigger: GGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCGGATGATTTCTATATaGGAAAGAATAATGGAACCA +
Preference number: 2 (lower is better)
Translates to: ALFTCEELPSTSVKISKLRMISI*ERIMEP
Trigger: TGGTTCCATTATTCTTTCCCATATAGAAATCATCCG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAATCTTTCCCAAGTTTaGTGCACTTCACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHNLSQV*CTSPHK
Trigger: TTTATGAGGTGAAGTGCATCAAACTTGGGAAAGATT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
3UTR CCA 72 bp CTAAGCTGGCACCGGGGATCTGGCTCTCATGAGGGGTaGAGGGCATACCACCTGTGGCGATCAGGATGTGTG +
Preference number: 3 (lower is better)
Translates to: LSWHRGSGSHEG*RAYHLWRSGCV
Trigger: CACACATCCTGATCGCCACAGGTGGTATGCCCTCCACCCCTCATGAGAGCCAGATCCCCGGTGCCAGCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp GTTATTCCTAAGCTGGCACCGGGGATCTGGCTCTCATaGGGGGTGGAGGGCATACCACCTGTGGCGATCAGG +
Preference number: 3 (lower is better)
Translates to: VIPKLAPGIWLS*GVEGIPPVAIR
Trigger: CCTGATCGCCACAGGTGGTATGCCCTCCACCCCTCATGAGAGCCAGATCCCCGGTGCCAGCTTAGGAATAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR CCA 72 bp CGGTTTGAATCCCCAGTTTGTTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: RFESPVCLNSGP*YSGPAQWPRAG
Trigger: GCCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGGGGATTCAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR CCA 72 bp TTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATaGCCCAGAGCAGGCAGTCAACATCTGGAATCATGG +
Preference number: 3 (lower is better)
Translates to: LNSGPWYSGPAQ*PRAGSQHLESW
Trigger: CCATGATTCCAGATGTTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CAA 90 bp TTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGAGCTCCTCCGTGCAGTaGGTGCTGATCATTGAATCA +
Preference number: 3 (lower is better)
Translates to: LFKLRSLVFGTRPMAQSRSSSVQ*VLIIES
Trigger: TGATTCAATGATCAGCACCAACTGCACGGAGGAGCT...CCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CAA 90 bp CCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAAGCTCCTCCGTGCAGTaGGTGCTGATCATTGAATCA +
Preference number: 3 (lower is better)
Translates to: PVCLNSGPWYSGPAQWPRSSSVQ*VLIIES
Trigger: TGATTCAATGATCAGCACCAACTGCACGGAGGAGCT...TCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CAA 90 bp TATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAAGTGTGACCACCACCTTTTCTTCCTaGTTAGCACAGACCATTTTC +
Preference number: 3 (lower is better)
Translates to: YGSHCPPHVSPGSQRSVTTTFSS*LAQTIF
Trigger: GAAAATGGTCTGTGCTAACAAGGAAGAAAAGGTGGT...GGTCACACTTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp CCAACAATGACGCTGCGGCCGGGCAATTCTTCCAGCTaGAAAAATCCATCGCTGGTTATTCCTAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: PTMTLRPGNSSS*KNPSLVIPKLA
Trigger: TGCCAGCTTAGGAATAACCAGCGATGGATTTTTTCAGCTGGAAGAATTGCCCGGCCGCAGCGTCATTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp CAACGAAGTGTGACCAGCTCTTCTGAAGAGGTAGGGTaGATGGCGACTGTGTTGTCAAAGTCTGCCTTCGTT +
Preference number: 3 (lower is better)
Translates to: QRSVTSSSEEVG*MATVLSKSAFV
Trigger: AACGAAGGCAGACTTTGACAACACAGTCGCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACACTTCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp GTCTCCTGGTTCTCAACGAAGTGTGACCAGCTCTTCTaGAGAGGTAGGGTGAATGGCGACTGTGTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: VSWFSTKCDQLF*RGRVNGDCVVK
Trigger: TTTGACAACACAGTCGCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACACTTCGTTGAGAACCAGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR GCA 72 bp GTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTaGAACAGCAAAACCCTGCAGCATTTCATCACACCC +
Preference number: 3 (lower is better)
Translates to: VVKVCLRCSHLH*NSKTLQHFITP
Trigger: GGGTGTGATGAAATGCTGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR GCA 72 bp AGAGGTAGGGTGAATGGCGACTGTGTTGTCAAAGTCTaGCTTCGTTGCTCCCATCTTCACTGCAACAGCAAA +
Preference number: 3 (lower is better)
Translates to: RGRVNGDCVVKV*LRCSHLHCNSK
Trigger: TTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTCGCCATTCACCCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR GCA 72 bp GACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGAAAGAAT +
Preference number: 3 (lower is better)
Translates to: DLYCGLGITREG*MATDDFYMGKN
Trigger: ATTCTTTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CAA 90 bp ACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTTTAAACTCAGGTCCTaGGTATTCGGGACCCGCCCA +
Preference number: 3 (lower is better)
Translates to: TYIPNCIDAFDVGILEFVFKLRS*VFGTRP
Trigger: TGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAA...GACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR GCA 72 bp TTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTaGCCGCCACACGTGTCTCCTGGTTCTCAACGAAGT +
Preference number: 3 (lower is better)
Translates to: LFVSFQKIYGSH*PPHVSPGSQRS
Trigger: ACTTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR-3UTR CAA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTGTCTTTTTAACCTCCTaGACCTGGGAGAACTTCAGC +
Preference number: 3 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSVFLTS*TWENFS
Trigger: GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGAC...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR CCA 72 bp TCTATTGTGGGCTTGGGATCACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATATGGGAAAGAATAATG +
Preference number: 3 (lower is better)
Translates to: SIVGLGSLVKAA*PRMISIWERIM
Trigger: CATTATTCTTTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp GTTCTCCAGCTCCTCCGTGCAGTTGGTGCTGATCATTaGATCAAAACTTCTAAGTACCTTATCATGCCGTAT +
Preference number: 3 (lower is better)
Translates to: VLQLLRAVGADH*IKTSKYLIMPY
Trigger: ATACGGCATGATAAGGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGAGCTGGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
3UTR-3UTR CAA 90 bp TCTTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAGTGCTTGATTCTGAATaGAGTTATCTTCTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: SSLYSKSRWASFRPAAIAVLDSE*SYLLLS
Trigger: GGAAAGAAGAAGATAACTCAATTCAGAATCAAGCAC...TGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR TCA 72 bp CTCACATTACATGCTTTTAGAAAAAGGTCTCATCCTTaGAGCAGCTTTGTTATATGCAGAGCACAGTACTGG +
Preference number: 3 (lower is better)
Translates to: LTLHAFRKRSHP*SSFVICRAQYW
Trigger: CCAGTACTGTGCTCTGCATATAACAAAGCTGCTTCAAGGATGAGACCTTTTTCTAAAAGCATGTAATGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR TCA 72 bp GAAGGGACTTTTGATGTATTTGAATCCACCTCCTTCTaGAAGCAGGAATCACTTCTAAATGTCTCTCATATC +
Preference number: 3 (lower is better)
Translates to: EGTFDVFESTSF*KQESLLNVSHI
Trigger: GATATGAGAGACATTTAGAAGTGATTCCTGCTTTCAGAAGGAGGTGGATTCAAATACATCAAAAGTCCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
3UTR-3UTR CAA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCAGAGGAAGGGACTTTaGATGTATTTGAATCCACCT +
Preference number: 3 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHQRKGL*MYLNPP
Trigger: AGGTGGATTCAAATACATCAAAAGTCCCTTCCTCTG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR TCA 90 bp CCTGGGAGAACTTCAGCACCTCCACGCCAGCGTTCTCCAGCTCCTCCGTGCAGTCTGGAATCATGGTCATaGCTGGTAGCCTACCGGGAA +
Preference number: 4 (lower is better)
Translates to: PGRTSAPPRQRSPAPPCSLESWS*LVAYRE
Trigger: TTCCCGGTAGGCTACCAGTCATGACCATGATTCCAG...ACTGCACGGAGGAGCTGGAGAACGCTGGCGTGGAGGTGCTGAAGTTCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp CCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAGGGATCTGGCTCTCATaGGGGGTGGAGGGCATACCA +
Preference number: 4 (lower is better)
Translates to: PVCLNSGPWYSGPAQWPRGIWLS*GVEGIP
Trigger: TGGTATGCCCTCCACCCCTCATGAGAGCCAGATCCC...TCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp CCTGGGAGAACTTCAGCACCTCCACGCCAGCGTTCTCCAGCTCCTCCGTGCAGTCTTTTGGTAACTGCGTaGTACATCGGGGTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGRTSAPPRQRSPAPPCSLLVTA*YIGVKL
Trigger: GAGCTTTACCCCGATGTATCACGCAGTTACCAAAAG...ACTGCACGGAGGAGCTGGAGAACGCTGGCGTGGAGGTGCTGAAGTTCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTGCGGCTGCGGCTCCTaGCTGCAGGCCATGGCACGG +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTCGCGS*LQAMAR
Trigger: CCGTGCCATGGCCTGCAGGCAGGAGCCGCAGCCGCA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR CCA 90 bp GACTGTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAAGTGCCACCCAGCTTGTaGCTCTCCACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DCVVKVCLRCSHLHCNSKVPPSL*LSTTAA
Trigger: GGCCGCCGTGGTGGAGAGCCACAAGCTGGGTGGCAC...TTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGTGCCACCCAGCTTGTaGCTCTCCACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTVPPSL*LSTTAA
Trigger: GGCCGCCGTGGTGGAGAGCCACAAGCTGGGTGGCAC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCAGTGCCACCCAGCTTGTaGCTCTCCACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAIATGVRRAFPHTSPTAVPPSL*LSTTAA
Trigger: GGCCGCCGTGGTGGAGAGCCACAAGCTGGGTGGCAC...TGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp TTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGCACAGCAATGTAACCTaGACCAACAATGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: LFKLRSLVFGTRPMAQSRHSNVT*TNNDAA
Trigger: CGCAGCGTCATTGTTGGTGCAGGTTACATTGCTGTG...CCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCCTGCCTGCAGGCCATaGCACGGGAGAGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLPACRP*HGRGRA
Trigger: CGCGCGCCCTCTCCCGTGCCATGGCCTGCAGGCAGG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR CCA 90 bp GCAGGTGCCAGGCTTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCGGCTCTCATGAGGGGTaGAGGGCATACCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGARLNQAESRSKTKSTGGSHEG*RAYHLW
Trigger: CCACAGGTGGTATGCCCTCCACCCCTCATGAGAGCC...GCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAAGCCTGGCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTCGGGACCCGCCCAATaGCCCAGAGCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTSGPAQ*PRAGSQ
Trigger: TTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp CTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAACCTGCACCAACAATaGCGCTGCGGCCGGGCAATT +
Preference number: 4 (lower is better)
Translates to: LTSKPDKVFLTSLTWENFNLHQQ*RCGRAI
Trigger: AATTGCCCGGCCGCAGCGTCATTGTTGGTGCAGGTT...GAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp CGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTCTTAGAACCCAGGGCTaGCAGGATCCCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: RWASFRPAAIATGVRRAFLRTQG*QDPCHL
Trigger: GAGATGGCAGGGATCCTGTCAGCCCTGGGTTCTAAG...AAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GGGAACTGCAGTAACCATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTAGAACCCAGGGCTaGCAGGATCCCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: GNCSNHADFQARQSLFNLLRTQG*QDPCHL
Trigger: GAGATGGCAGGGATCCTGTCAGCCCTGGGTTCTAAG...GAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATGGTTACTGCAGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGGTGGGCGGATCACCTaGAGGTGGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTGGRIT*RWEFET
Trigger: GGTCTCAAACTCCCACCTTCAGGTGATCCGCCCACC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCGGTGGGCGGATCACCTaGAGGTGGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: CNWSKKSFSTYIPNCIDAGGRIT*RWEFET
Trigger: GGTCTCAAACTCCCACCTTCAGGTGATCCGCCCACC...GGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp GCAGGTGCCAGGCTTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCAGGGCATACCACCTGTaGCGATCAGGATGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGARLNQAESRSKTKSTGRAYHL*RSGCVG
Trigger: CCCCACACATCCTGATCGCCACAGGTGGTATGCCCT...GCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAAGCCTGGCACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGGCTCTCATGAGGGGTaGAGGGCATACCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTGSHEG*RAYHLW
Trigger: CCACAGGTGGTATGCCCTCCACCCCTCATGAGAGCC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTTCGGGACCCGCCCAATaGCCCAGAGCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSSGPAQ*PRAGSQ
Trigger: TTGACTGCCTGCTCTGGGCCATTGGGCGGGTCCCGA...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCTTAGAACCCAGGGCTaGCAGGATCCCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLRTQG*QDPCHL
Trigger: GAGATGGCAGGGATCCTGTCAGCCCTGGGTTCTAAG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp AGAAGATCTATGGGTCCCACTGCCCGCCACACGTGTCTCCTGGTTCTCAACGAACGGGGTAAAGCTCGTTaGATAGGTCTTCACATTTTC +
Preference number: 4 (lower is better)
Translates to: RRSMGPTARHTCLLVLNERGKAR*IGLHIF
Trigger: GAAAATGTGAAGACCTATTCAACGAGCTTTACCCCG...TTCGTTGAGAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATAGATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp ACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAGCAACCTGCACCAACAATaGCGCTGCGGCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSKPDKVFLTSLTWENFSNLHQQ*RCGLVR
Trigger: TCTCACCAAGCCGCAGCGTCATTGTTGGTGCAGGTT...GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523295.5
CDS-3UTR CCA 90 bp GGGAACTGCAGTAACCATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCGGCGATCAGGATGTGTaGGGCGGTGTACTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GNCSNHADFQARQSLFNLGDQDV*GGVLFP
Trigger: GGGAAAAAGTACACCGCCCCACACATCCTGATCGCC...GAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATGGTTACTGCAGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCACTATGCTGTGCATGCTaGCCTCAAACTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTALCCAC*PQTCRL
Trigger: GAGCCTACAAGTTTGAGGCCAGCATGCACAGCATAG...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
3UTR CAA 72 bp GGTGAATGGCGACTGTGTTGTCAAAGTCTGCCTTCGTaGCTCCCATCTTCACTGCAACAGCAAAACCCTGCA +
Preference number: 4 (lower is better)
Translates to: GEWRLCCQSLPS*LPSSLQQQNPA
Trigger: TGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACACAGTCGCCATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGCTTGGGATCACTCGTaGAGGCTGCATGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCIAWDHS*RLHGHG
Trigger: TCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGC...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCAGGAATTCGTCTACGATaGTATGACCCTTGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTAGIRLR*YDPCHR
Trigger: CCGATGACAAGGGTCATATCATCGTAGACGAATTCC...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TCCAGCTCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCAGGCAGAGGTTGTGGTaGGCTGAAATAGCACCACCG +
Preference number: 4 (lower is better)
Translates to: SSSSVQLVLIIESKLLSTRQRLW*AEIAPP
Trigger: CGGTGGTGCTATTTCAGCTCACCACAACCTCTGCCT...GGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGATCACCCAAGCTCAAGTaGTCCTCTCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KSRWASFRPAAIATGVRRSPKLK*SSHLSL
Trigger: GAGGCTGAGGTGAGAGGATCACTTGAGCTTGGGTGA...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTTGAGTGCAGCAGCATaGTCAGGACTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLSAAA*SGLTAA
Trigger: GGCTGCAGTGAGTCCTGATCATGCTGCTGCACTCAA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp ACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAGCCAACATTCACGCAAGTaGCACCCAGCTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSKPDKVFLTSLTWENFSQHSRK*HPACGS
Trigger: AGAGCCACAAGCTGGGTGGCACTTGCGTGAATGTTG...GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp GTGTTGTCAAAGTCTGCCTTCGTTGCTCCCATCTTCACTGCAACAGCAAAACCCGATGCAGTCTTGCTATaGTGTGCATGCTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: VLSKSAFVAPIFTATAKPDAVLL*CACWPQ
Trigger: TTGAGGCCAGCATGCACAGCATAGCAAGACTGCATC...GGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp CTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCTGGTTATTCCTAAGCTaGCACCGGGGATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LTSKPDKVFLTSLTWENFWLFLS*HRGSGS
Trigger: AGAGCCAGATCCCCGGTGCCAGCTTAGGAATAACCA...GAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp CATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAATCTGAAGAGGTAGGGTaGATGGCGACTGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HADFQARQSLFNLLDLGESEEVG*MATVLS
Trigger: TGACAACACAGTCGCCATTCACCCTACCTCTTCAGA...TTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp TCCAGCTCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCTGTGACCAGCTCTTCTaGAGAGGTAGGGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: SSSSVQLVLIIESKLLSTCDQLF*RGRVNG
Trigger: GCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACA...GGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp GCAGGTGCCAGGCTTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCGTTCTCAACGAAGTGTaGCCAGCTCTTCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGARLNQAESRSKTKSTGVLNEV*PALLKR
Trigger: CCTCTTCAGAAGAGCTGGTCACACTTCGTTGAGAAC...GCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAAGCCTGGCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp ACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAGCGACGCTGCGGCTTGGTaGGATTGTTTTGATAGATGG +
Preference number: 4 (lower is better)
Translates to: TSKPDKVFLTSLTWENFSDAAAW*DCFDRW
Trigger: CCATCTATCAAAACAATCTCACCAAGCCGCAGCGTC...GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523295.5
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGCTGCGGCTCCTGCCTaGAGGCCATGGCACGGGAGA +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHAAAPA*RPWHGR
Trigger: TCTCCCGTGCCATGGCCTGCAGGCAGGAGCCGCAGC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR GCA 90 bp TTCGTTGCTCCCATCTTCACTGCAACAGCAAAACCCTGCAGCATTTCATCACACCACAGCAATGTAACCTaGACCAACAATGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: FVAPIFTATAKPCSISSHHSNVT*TNNDAA
Trigger: CGCAGCGTCATTGTTGGTGCAGGTTACATTGCTGTG...GTGTGATGAAATGCTGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp CATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAATCGGCCAGCAGCTATTaGAACTGGAGTAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HADFQARQSLFNLLDLGESASSY*NWSKKS
Trigger: GCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGA...TTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp TTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGTTTCCTTTTGGTAACTaGGTGATACATCGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LFKLRSLVFGTRPMAQSRFPFGN*VIHRGK
Trigger: TTTACCCCGATGTATCACGCAGTTACCAAAAGGAAA...CCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TTCGTTGCTCCCATCTTCACTGCAACAGCAAAACCCTGCAGCATTTCATCACACGTAGAGATGCAGTCTTaGTATGCTGTGCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: FVAPIFTATAKPCSISSHVEMQS*YAVHAG
Trigger: GCCAGCATGCACAGCATAGCAAGACTGCATCTCTAC...GTGTGATGAAATGCTGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCTGCATGGCCACGGATaGTTTCTATATGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLHGHG*FLYGTW
Trigger: CCAAGTCCCATATAGAAATCATCCGTGGCCATGCAG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGGGATCTGGCTCTCATaGGGGGTGGAGGGCATACCA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLGIWLS*GVEGIP
Trigger: TGGTATGCCCTCCACCCCTCATGAGAGCCAGATCCC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCATGCCGTATCATCAGTaGTGTCTTAGAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CNWSKKSFSTYIPNCIDAMPYHQ*CLRTQG
Trigger: GCCCTGGGTTCTAAGACATCACTGATGATACGGCAT...GGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGTTCTCAACGAAGTGTaGCCAGCTCTTCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTVLNEV*PALLKR
Trigger: CCTCTTCAGAAGAGCTGGTCACACTTCGTTGAGAAC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGACCTTGAGTGCAGCAGCATaGTCAGGACTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CIDAFDVGILEFVYDDMTLSAAA*SGLTAA
Trigger: GGCTGCAGTGAGTCCTGATCATGCTGCTGCACTCAA...GGTCATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp CTTCTAAGTACCTTATCATGCCGTATCATCAGTGATGTCTTAGAACCCAGGGCTAGTCAGGCATGGTGGTaGGTGCCTGTAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSTLSCRIISDVLEPRASQAWW*VPVIPA
Trigger: AGCTGGAATTACAGGCACGCACCACCATGCCTGACT...AGCCCTGGGTTCTAAGACATCACTGATGATACGGCATGATAAGGTACTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGTAGAGATGCAGTCTTaGTATGCTGTGCATGCTGGC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTVEMQS*YAVHAG
Trigger: GCCAGCATGCACAGCATAGCAAGACTGCATCTCTAC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GGGAACTGCAGTAACCATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTCGTGAAGGCTGCATaGCCACGGATGATTTCTATA +
Preference number: 4 (lower is better)
Translates to: GNCSNHADFQARQSLFNLLVKAA*PRMISI
Trigger: TATAGAAATCATCCGTGGCCATGCAGCCTTCACGAG...GAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATGGTTACTGCAGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TTTGAATCCCCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAACAGGCAGTCAACATCTaGAATCATGGTCATGACTGG +
Preference number: 4 (lower is better)
Translates to: FESPVCLNSGPWYSGPAQQAVNI*NHGHDW
Trigger: CCAGTCATGACCATGATTCCAGATGTTGACTGCCTG...TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGGGGATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLNSGP*YSGPAQ
Trigger: TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCAAGCAGCTATTGCAACTaGAGTAAGAAGAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTASSYCN*SKKSFS
Trigger: GGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCT...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTGCCACACGTGTCTCCTaGTTCTCAACGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSATRVS*FSTKCD
Trigger: GTCACACTTCGTTGAGAACCAGGAGACACGTGTGGC...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCATTTCAGAAGATCTATaGGTCCCACTGCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: CNWSKKSFSTYIPNCIDAISEDL*VPLPAT
Trigger: TGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAAT...GGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCTATGCTGTGCATGCTaGCCTCAAACTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLCCAC*PQTCRL
Trigger: GAGCCTACAAGTTTGAGGCCAGCATGCACAGCATAG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAACCTGCACCAACAATaGCGCTGCGGCCGGGCAATT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLNLHQQ*RCGRAI
Trigger: AATTGCCCGGCCGCAGCGTCATTGTTGGTGCAGGTT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTATGCCGTATCATCAGTaGTGTCTTAGAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSMPYHQ*CLRTQG
Trigger: GCCCTGGGTTCTAAGACATCACTGATGATACGGCAT...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp CGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTTGCCATCAACTTCTGTaGAAATTAGCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RWASFRPAAIATGVRRAFCHQLL*KLASWH
Trigger: GTGCCAGCTTGCTAATTTTCACAGAAGTTGATGGCA...AAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp CTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCCTGCATGGCCACGGATaGTTTCTATATGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LTSKPDKVFLTSLTWENFLHGHG*FLYGKE
Trigger: TTCTTTCCCATATAGAAATCATCCGTGGCCATGCAG...GAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TCTTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCACAACATTCACGCAAGTaGCACCCAGCTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLYSKSRWASFRPAAIAQHSRK*HPACGS
Trigger: AGAGCCACAAGCTGGGTGGCACTTGCGTGAATGTTG...TGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCACTAAGTACCTTATCATaGCGTATCATCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTALSTLS*RIISDV
Trigger: GACATCACTGATGATACGGCATGATAAGGTACTTAG...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGCAACAGCAAAACCCTaGAGCATTTCATCACACCCA +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTATAKP*SISSHP
Trigger: TGGGTGTGATGAAATGCTGCAGGGTTTTGCTGTTGC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGATCTATGGGTCCCACTaGCCGCCACACGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLIYGSH*PPHVSP
Trigger: AGGAGACACGTGTGGCGGGCAGTGGGACCCATAGAT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp TCCACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCAGGCCTGAGCCACCGTaGCTTGCCACAAACTATTTT +
Preference number: 4 (lower is better)
Translates to: STYIPNCIDAFDVGILEFRPEPP*LATNYF
Trigger: AAAATAGTTTGTGGCAAGGCACGGTGGCTCAGGCCT...GAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAGGGCATACCACCTGTaGCGATCAGGATGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLRAYHL*RSGCVG
Trigger: CCCCACACATCCTGATCGCCACAGGTGGTATGCCCT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp CTTCTAAGTACCTTATCATGCCGTATCATCAGTGATGTCTTAGAACCCAGGGCTTTAACCTCCTTGACCTaGGAGAACTTCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LLSTLSCRIISDVLEPRALTSLT*ENFSTS
Trigger: GGAGGTGCTGAAGTTCTCCCAGGTCAAGGAGGTTAA...AGCCCTGGGTTCTAAGACATCACTGATGATACGGCATGATAAGGTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp CTTCTAAGTACCTTATCATGCCGTATCATCAGTGATGTCTTAGAACCCAGGGCTTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLSTLSCRIISDVLEPRALNSGP*YSGPAQ
Trigger: TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAA...AGCCCTGGGTTCTAAGACATCACTGATGATACGGCATGATAAGGTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTCAGCATGATCATGCATaGATTCAGAGTGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSQHDHA*IQSGQL
Trigger: CAGCTGTCCACTCTGAATTCATGCATGATCATGCTG...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGCTTGGGATCACTCGTaGAGGCTGCATGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHAWDHS*RLHGHG
Trigger: TCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCACCGTGCAGTTGGTGCTaGTCATTGAATCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: AAIATGVRRAFPHTSPTAPCSWC*SLNQNF
Trigger: GAAGTTTTGATTCAATGATCAGCACCAACTGCACGG...TGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCTTATCACTGGAATCATGGTCATaGCTGGTAGCCTACCGGGAA +
Preference number: 4 (lower is better)
Translates to: SSVQLVLIIESKLLSTLSLESWS*LVAYRE
Trigger: TTCCCGGTAGGCTACCAGTCATGACCATGATTCCAG...TGATAAGGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GGGAACTGCAGTAACCATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCCCTTGTCATCGGTTTaGATCCCCAGTTTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GNCSNHADFQARQSLFNLPLSSV*IPSLFK
Trigger: TTTAAACAAACTGGGGATTCAAACCGATGACAAGGG...GAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATGGTTACTGCAGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCGGGGTAAAGCTCGTTaGATAGGTCTTCACATTTTC +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTRGKAR*IGLHIF
Trigger: GAAAATGTGAAGACCTATTCAACGAGCTTTACCCCG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAGGCAGAGGTTGTGGTaGGCTGAAATAGCACCACCG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLRQRLW*AEIAPP
Trigger: CGGTGGTGCTATTTCAGCTCACCACAACCTCTGCCT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCAGGTGCCAGGCTTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCGGCACTGTTTACATGTaGAGAATTGCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: AGARLNQAESRSKTKSTGGTVYM*RIAINF
Trigger: GAAGTTGATGGCAATTCTTCACATGTAAACAGTGCC...GCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAAGCCTGGCACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACATCACTCGTGAAGGCTaGATGGCCACGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: FLIFKKSMGKFSASSYCNITREG*MATDDF
Trigger: GAAATCATCCGTGGCCATGCAGCCTTCACGAGTGAT...GTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAAAGTCTGCCTTCGTTaGTCCCATCTTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: YSKSRWASFRPAAIATGVKVCLR*SHLHCN
Trigger: GTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTT...TACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTGTGTTGTCAAAGTCTaGCTTCGTTGCTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTCVVKV*LRCSHL
Trigger: AAGATGGGAGCAACGAAGGCAGACTTTGACAACACA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGGCGATCAGGATGTGTaGGGCGGTGTACTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLGDQDV*GGVLFP
Trigger: GGGAAAAAGTACACCGCCCCACACATCCTGATCGCC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp ACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCCAGGCAGTCAACATCTaGAATCATGGTCATGACTGG +
Preference number: 4 (lower is better)
Translates to: TYIPNCIDAFDVGILEFVQAVNI*NHGHDW
Trigger: CCAGTCATGACCATGATTCCAGATGTTGACTGCCTG...GACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATATTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCILNSGP*YSGPAQ
Trigger: TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAA...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp CATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAATATTCAAAAAGTCGATaGGCAAGTTTTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HADFQARQSLFNLLDLGEYSKSR*ASFRPA
Trigger: TGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATA...TTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTGGAATCATGGTCATaGCTGGTAGCCTACCGGGAA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLESWS*LVAYRE
Trigger: TTCCCGGTAGGCTACCAGTCATGACCATGATTCCAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCTGCATAGATGCCTTTaGCGTTGGTATTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLHRCL*RWYSGI
Trigger: AATTCCAGAATACCAACGTCAAAGGCATCTATGCAG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCACTGCATAGATGCCTTTaGCGTTGGTATTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: AAIATGVRRAFPHTSPTALHRCL*RWYSGI
Trigger: AATTCCAGAATACCAACGTCAAAGGCATCTATGCAG...TGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTGTGACCAGCTCTTCTaGAGAGGTAGGGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLCDQLF*RGRVNG
Trigger: GCCATTCACCCTACCTCTTCAGAAGAGCTGGTCACA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCAACATTCACGCAAGTaGCACCCAGCTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLQHSRK*HPACGS
Trigger: AGAGCCACAAGCTGGGTGGCACTTGCGTGAATGTTG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATATCTATGGGTCCCACTaGCCGCCACACGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHIYGSH*PPHVSP
Trigger: AGGAGACACGTGTGGCGGGCAGTGGGACCCATAGAT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGGATTGTTTTGATAGATaGCATTCAGGCGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTDCFDR*HSGGSH
Trigger: ATGTGAGCCGCCTGAATGCCATCTATCAAAACAATC...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTGGTTATTCCTAAGCTaGCACCGGGGATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLWLFLS*HRGSGS
Trigger: AGAGCCAGATCCCCGGTGCCAGCTTAGGAATAACCA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGTTAACCTCCTTGACCTaGGAGAACTTCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMLTSLT*ENFSTS
Trigger: GGAGGTGCTGAAGTTCTCCCAGGTCAAGGAGGTTAA...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp TCCAGCTCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCAGCAGCTATTGCAACTaGAGTAAGAAGAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SSSSVQLVLIIESKLLSTSSYCN*SKKSFS
Trigger: GGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGCT...GGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGATATTCAAAAAGTCGATaGGCAAGTTTTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KSRWASFRPAAIATGVRRYSKSR*ASFRPA
Trigger: TGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATA...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGCCACACGTGTCTCCTaGTTCTCAACGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLATRVS*FSTKCD
Trigger: GTCACACTTCGTTGAGAACCAGGAGACACGTGTGGC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGAAAATTAGTCAGGCATaGTGGTGCGTGCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTKISQA*WCVPVI
Trigger: AATTACAGGCACGCACCACCATGCCTGACTAATTTT...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp TGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCAAAGGTTCTGTGCACTaGCACTGTTTACATGTGAAG +
Preference number: 4 (lower is better)
Translates to: CNWSKKSFSTYIPNCIDAKGSVH*HCLHVK
Trigger: CTTCACATGTAAACAGTGCCAGTGCACAGAACCTTT...GGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp TTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCCTCCAGAACACCAGGCAATTCTTCCAGCTaGAAAAATCCATCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LIKLNQGQRQNPQASRTPGNSSS*KNPSLV
Trigger: AACCAGCGATGGATTTTTTCAGCTGGAAGAATTGCC...TGGTGTTCTGGAGGCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTCTGAAGAGGTAGGGTaGATGGCGACTGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLSEEVG*MATVLS
Trigger: TGACAACACAGTCGCCATTCACCCTACCTCTTCAGA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATTCACCCAAGCTCAAGTaGTCCTCTCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSPKLK*SSHLSL
Trigger: GAGGCTGAGGTGAGAGGATCACTTGAGCTTGGGTGA...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TTTGAATCCCCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATGCTTGATTCTGAATTaGGTTATCTTCTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FESPVCLNSGPWYSGPAQCLILN*VIFFFP
Trigger: GGGAAAGAAGAAGATAACTCAATTCAGAATCAAGCA...TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGGGGATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLITREG*MATDDF
Trigger: GAAATCATCCGTGGCCATGCAGCCTTCACGAGTGAT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCACAGCAATGTAACCTaGACCAACAATGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLHSNVT*TNNDAA
Trigger: CGCAGCGTCATTGTTGGTGCAGGTTACATTGCTGTG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp AAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAAGAAGACTAAGTACCTTATCATaGCGTATCATCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: KSRWASFRPAAIATGVRRLSTLS*RIISDV
Trigger: GACATCACTGATGATACGGCATGATAAGGTACTTAG...TCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp TTCGTTGCTCCCATCTTCACTGCAACAGCAAAACCCTGCAGCATTTCATCACACTATATAAAGGTTCTGTaGACTGGCACTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: FVAPIFTATAKPCSISSHYIKVL*TGTVYM
Trigger: CATGTAAACAGTGCCAGTGCACAGAACCTTTATATA...GTGTGATGAAATGCTGCAGGGTTTTGCTGTTGCAGTGAAGATGGGAGCAACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAGGCCTGAGCCACCGTaGCTTGCCACAAACTATTTT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLRPEPP*LATNYF
Trigger: AAAATAGTTTGTGGCAAGGCACGGTGGCTCAGGCCT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGATGCAGTCTTGCTATaGTGTGCATGCTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLDAVLL*CACWPQ
Trigger: TTGAGGCCAGCATGCACAGCATAGCAAGACTGCATC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTGATTGTTTTGATAGATaGCATTCAGGCGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSDCFDR*HSGGSH
Trigger: ATGTGAGCCGCCTGAATGCCATCTATCAAAACAATC...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTTAACCTCCTTGACCTaGGAGAACTTCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLTSLT*ENFSTS
Trigger: GGAGGTGCTGAAGTTCTCCCAGGTCAAGGAGGTTAA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCAGCATGATCATGCATaGATTCAGAGTGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLQHDHA*IQSGQL
Trigger: CAGCTGTCCACTCTGAATTCATGCATGATCATGCTG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TTCCTTATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACCCCTTGTCATCGGTTTaGATCCCCAGTTTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: FLIFKKSMGKFSASSYCNPLSSV*IPSLFK
Trigger: TTTAAACAAACTGGGGATTCAAACCGATGACAAGGG...GTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATATAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGGAATTCGTCTACGATaGTATGACCCTTGTCATCGG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLGIRLR*YDPCHR
Trigger: CCGATGACAAGGGTCATATCATCGTAGACGAATTCC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTCTATTCCATATTTATaGATGGCTTCATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTSIPYL*MASSSV
Trigger: CACGGAAGATGAAGCCATTCATAAATATGGAATAGA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTTTTGGTAACTGCGTaGTACATCGGGGTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLLVTA*YIGVKL
Trigger: GAGCTTTACCCCGATGTATCACGCAGTTACCAAAAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGAATCTTTCCCAAGTTTaGTGCACTTCACCTCATAAA +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTNLSQV*CTSPHK
Trigger: TTTATGAGGTGAAGTGCATCAAACTTGGGAAAGATT...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR GCA 90 bp AACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCTTTACATACATCCCCAACTaGATAGATGCCTTTGACGTT +
Preference number: 4 (lower is better)
Translates to: NWSKKSFSTYIPNCIDAFTYIPN*IDAFDV
Trigger: AACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT...AAAGGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAAAGTCTGCCTTCGTTaGTCCCATCTTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLKVCLR*SHLHCN
Trigger: GTTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAGTCAGGCATGGTGGTaGGTGCCTGTAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSQAWW*VPVIPA
Trigger: AGCTGGAATTACAGGCACGCACCACCATGCCTGACT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp TTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCCTCCAGAACACCAAGCAGCTTTGTTATATaGAGAGCACAGTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: LIKLNQGQRQNPQASRTPSSFVI*RAQYWL
Trigger: AAGCCAGTACTGTGCTCTGCATATAACAAAGCTGCT...TGGTGTTCTGGAGGCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTCGTGAAGGCTGCATaGCCACGGATGATTTCTATA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLVKAA*PRMISI
Trigger: TATAGAAATCATCCGTGGCCATGCAGCCTTCACGAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTTGACGTTGGTATTCTaGAATTCGTCTACGATGATA +
Preference number: 4 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLTLVF*NSSTMI
Trigger: TATCATCGTAGACGAATTCCAGAATACCAACGTCAA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCAGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATTGACGTTGGTATTCTaGAATTCGTCTACGATGATA +
Preference number: 4 (lower is better)
Translates to: AAIATGVRRAFPHTSPTALTLVF*NSSTMI
Trigger: TATCATCGTAGACGAATTCCAGAATACCAACGTCAA...TGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp ACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAGCCGGATGATTTCTATATaGGAAAGAATAATGGAACCA +
Preference number: 4 (lower is better)
Translates to: TSKPDKVFLTSLTWENFSRMISI*ERIMEP
Trigger: TGGTTCCATTATTCTTTCCCATATAGAAATCATCCG...GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATATGCCGTATCATCAGTaGTGTCTTAGAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHMPYHQ*CLRTQG
Trigger: GCCCTGGGTTCTAAGACATCACTGATGATACGGCAT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCCGTGCAGTTGGTGCTaGTCATTGAATCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLPCSWC*SLNQNF
Trigger: GAAGTTTTGATTCAATGATCAGCACCAACTGCACGG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCTTATCACTGCATAGATGCCTTTaGCGTTGGTATTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SSVQLVLIIESKLLSTLSLHRCL*RWYSGI
Trigger: AATTCCAGAATACCAACGTCAAAGGCATCTATGCAG...TGATAAGGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTGCCATCAACTTCTGTaGAAATTAGCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLCHQLL*KLASWH
Trigger: GTGCCAGCTTGCTAATTTTCACAGAAGTTGATGGCA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGAATCCACCTCCTTCTaGAAGCAGGAATCACTTCTA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLESTSF*KQESLL
Trigger: TAGAAGTGATTCCTGCTTTCAGAAGGAGGTGGATTC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATTCGGCCAGCAGCTATTaGAACTGGAGTAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSASSY*NWSKKS
Trigger: GCTCTTCTTACTCCAGTTGCAATAGCTGCTGGCCGA...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTGTGTTGTCAAAGTCTaGCTTCGTTGCTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLCVVKV*LRCSHL
Trigger: AAGATGGGAGCAACGAAGGCAGACTTTGACAACACA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATATTTCAGAAGATCTATaGGTCCCACTGCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHISEDL*VPLPAT
Trigger: TGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAAT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCAGCATGATCATGCATaGATTCAGAGTGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHQHDHA*IQSGQL
Trigger: CAGCTGTCCACTCTGAATTCATGCATGATCATGCTG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp TCCTCCGTGCAGTTGGTGCTGATCATTGAATCAAAACTTCTAAGTACCTTATCAATCTGCAATGCTTGGTaGGATTGTTTTGATAGATGG +
Preference number: 4 (lower is better)
Translates to: SSVQLVLIIESKLLSTLSICNAW*DCFDRW
Trigger: CCATCTATCAAAACAATCTCACCAAGCATTGCAGAT...TGATAAGGTACTTAGAAGTTTTGATTCAATGATCAGCACCAACTGCACGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGACATACATCCCCAACTaGATAGATGCCTTTGACGTT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLTYIPN*IDAFDV
Trigger: AACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGATTGTTTTGATAGATaGCATTCAGGCGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLDCFDR*HSGGSH
Trigger: ATGTGAGCCGCCTGAATGCCATCTATCAAAACAATC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCAGGCAGTCAACATCTaGAATCATGGTCATGACTGG +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHQAVNI*NHGHDW
Trigger: CCAGTCATGACCATGATTCCAGATGTTGACTGCCTG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATATTGACGTTGGTATTCTaGAATTCGTCTACGATGATA +
Preference number: 4 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCILTLVF*NSSTMI
Trigger: TATCATCGTAGACGAATTCCAGAATACCAACGTCAA...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTATTCAAAAAGTCGATaGGCAAGTTTTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLYSKSR*ASFRPA
Trigger: TGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAAAATTAGTCAGGCATaGTGGTGCGTGCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLKISQA*WCVPVI
Trigger: AATTACAGGCACGCACCACCATGCCTGACTAATTTT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTATATGGGACTTGGTaGGATTGTTTTGATAGATGG +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLYGTW*DCFDRW
Trigger: CCATCTATCAAAACAATCTCACCAAGTCCCATATAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR TCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGGCAATTCTTCCAGCTaGAAAAATCCATCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHGNSSS*KNPSLV
Trigger: AACCAGCGATGGATTTTTTCAGCTGGAAGAATTGCC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR TCA 90 bp AACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGTCTATTCCATATTTATaGATGGCTTCATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: NCIDAFDVGILEFVYDDMSIPYL*MASSSV
Trigger: CACGGAAGATGAAGCCATTCATAAATATGGAATAGA...CATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTAAGTACCTTATCATaGCGTATCATCAGTGATGTC +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLSTLS*RIISDV
Trigger: GACATCACTGATGATACGGCATGATAAGGTACTTAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTTTCCTTTTGGTAACTaGGTGATACATCGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLFPFGN*VIHRGK
Trigger: TTTACCCCGATGTATCACGCAGTTACCAAAAGGAAA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATACATACATCCCCAACTaGATAGATGCCTTTGACGTT +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHTYIPN*IDAFDV
Trigger: AACGTCAAAGGCATCTATGCAGTTGGGGATGTATGT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAGCAGCTTTGTTATATaGAGAGCACAGTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSSFVI*RAQYWL
Trigger: AAGCCAGTACTGTGCTCTGCATATAACAAAGCTGCT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTCCACATTACCTTTTTaGGTACACATCCAACATTCA +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLSTLPF*VHIQHS
Trigger: TGAATGTTGGATGTGTACCCAAAAAGGTAATGTGGA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CCA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCGGATGATTTCTATATaGGACTTGGTGAGATTGTTT +
Preference number: 4 (lower is better)
Translates to: ALFTCEELPSTSVKISKLRMISI*DLVRLF
Trigger: AAACAATCTCACCAAGTCCCATATAGAAATCATCCG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR GCA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATTATATAAAGGTTCTGTaGACTGGCACTGTTTACATG +
Preference number: 4 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHYIKVL*TGTVYM
Trigger: CATGTAAACAGTGCCAGTGCACAGAACCTTTATATA...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
3UTR CAA 72 bp ATACATAAAACTCAAACAGTAAGTCAATGTGATTATTaGTTTCATTTCAGAAGATCTATGGGTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: IHKTQTVSQCDY*FHFRRSMGPTA
Trigger: GGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACATTGACTTACTGTTTGAGTTTTATGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCACAAGTGCCACCCAGCTaGTGGCTCTCCACCACGGCG +
Preference number: 5 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTAQVPPS*WLSTTA
Trigger: CGCCGTGGTGGAGAGCCACAAGCTGGGTGGCACTTG...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS CCA 90 bp CCACTGACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATATGGGACCAGGCGTGGTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: PLTSIVGLGSLVKAA*PRMISIWDQAWWCT
Trigger: TGTGCACCACCACGCCTGGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS GCA 90 bp TTTCCCACTGACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGACCAGGCGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FPTDLYCGLGITREG*MATDDFYMGPGVVV
Trigger: CACCACCACGCCTGGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS-3UTR CAA 90 bp AACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCTTTCAAGTGCCACCCAGCTaGTGGCTCTCCACCACGGCG +
Preference number: 5 (lower is better)
Translates to: NWSKKSFSTYIPNCIDAFQVPPS*WLSTTA
Trigger: CGCCGTGGTGGAGAGCCACAAGCTGGGTGGCACTTG...AAAGGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp AGGCAGTCAACATCTGGAATCATGGTCATGACTGGTAGCCTACCGGGAACTGCAACCTCTATTGTGGGCTaGGGATCACTCGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RQSTSGIMVMTGSLPGTATSIVG*GSLVKA
Trigger: AGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGT...TGCAGTTCCCGGTAGGCTACCAGTCATGACCATGATTCCAGATGTTGACTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS GCA 90 bp TTTTGGGTACACATCCAACATTCACCTACTCAAGGTCGCCTTGGCTaGAATTCAGATCACCCGAAAATCCCAAAGCCCAGGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: FWVHIQHSPTQGRLG*NSDHPKIPKPRLHF
Trigger: GAAGTGCAGCCTGGGCTTTGGGATTTTCGGGTGATCTGAATTGCAGCCAAGGCGACCTTGAGTAGGTGAATGTTGGATGTGTACCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521479.1
CDS CCA 90 bp ACCTTTTTGGGTACACATCCAACATTCACCTACTCAAGGTCGCCTTaGCTGCAATTCAGATCACCCGAAAATCCCAAAGCCCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: TFLGTHPTFTYSRSP*LQFRSPENPKAQAA
Trigger: TGCAGCCTGGGCTTTGGGATTTTCGGGTGATCTGAATTGCAGCCAAGGCGACCTTGAGTAGGTGAATGTTGGATGTGTACCCAAAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521479.1
CDS-3UTR CAA 90 bp TTTGAATCCCCAGTTTGTTTAAACTCAGGTCCTTGGTATTCGGGACCCGCCCAATTTAAACTCAGGTCCTaGGTATTCGGGACCCGCCCA +
Preference number: 5 (lower is better)
Translates to: FESPVCLNSGPWYSGPAQFKLRS*VFGTRP
Trigger: TGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAA...TTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGGGGATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS GCA 90 bp TTTCCCACTGACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGACTTGGTGAGATTGTT +
Preference number: 5 (lower is better)
Translates to: FPTDLYCGLGITREG*MATDDFYMGLGEIV
Trigger: AACAATCTCACCAAGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTCAGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
CDS-3UTR CAA 90 bp CATGCTGACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAAAGCTCCTCCGTGCAGTaGGTGCTGATCATTGAATCA +
Preference number: 5 (lower is better)
Translates to: HADFQARQSLFNLLDLGESSSVQ*VLIIES
Trigger: TGATTCAATGATCAGCACCAACTGCACGGAGGAGCT...TTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGTCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGTTTAAACTCAGGTCCTaGGTATTCGGGACCCGCCCA +
Preference number: 5 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTFKLRS*VFGTRP
Trigger: TGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAA...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATCAAGTGCCACCCAGCTaGTGGCTCTCCACCACGGCG +
Preference number: 5 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHQVPPS*WLSTTA
Trigger: CGCCGTGGTGGAGAGCCACAAGCTGGGTGGCACTTG...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp ACTTCCAAGCCCGACAAAGTCTTTTTAACCTCCTTGACCTGGGAGAACTTCAGCGTCTTTTTAACCTCCTaGACCTGGGAGAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: TSKPDKVFLTSLTWENFSVFLTS*TWENFS
Trigger: GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGAC...GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGACTTTGTCGGGCTTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCAAAGTCTGCCTTCGTaGCTCCCATCTTCACTGCAA +
Preference number: 5 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTQSLPS*LPSSLQ
Trigger: TTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp ATATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTAGCTCCTCCGTGCAGTaGGTGCTGATCATTGAATCA +
Preference number: 5 (lower is better)
Translates to: IFKKSMGKFSASSYCNWSSSSVQ*VLIIES
Trigger: TGATTCAATGATCAGCACCAACTGCACGGAGGAGCT...ACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp AACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCTTTTTTAAACTCAGGTCCTaGGTATTCGGGACCCGCCCA +
Preference number: 5 (lower is better)
Translates to: NWSKKSFSTYIPNCIDAFFKLRS*VFGTRP
Trigger: TGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAA...AAAGGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGCTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCG +
Preference number: 5 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTLGEIV*IDGIQA
Trigger: CGCCTGAATGCCATCTATCAAAACAATCTCACCAAG...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAGATGCCTTTCAAAGTCTGCCTTCGTaGCTCCCATCTTCACTGCAA +
Preference number: 5 (lower is better)
Translates to: NWSKKSFSTYIPNCIDAFQSLPS*LPSSLQ
Trigger: TTGCAGTGAAGATGGGAGCAACGAAGGCAGACTTTG...AAAGGCATCTATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CAA 90 bp GCAGGTGCCAGGCTTAATCAAGCTGAATCAAGGTCAAAGACAAAATCCACAGGCATTTACCCTCACAACTaGGAAAGCCATAATCAGCAT +
Preference number: 5 (lower is better)
Translates to: AGARLNQAESRSKTKSTGIYPHN*ESHNQH
Trigger: ATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAAT...GCCTGTGGATTTTGTCTTTGACCTTGATTCAGCTTGATTAAGCCTGGCACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CAA 90 bp TATTCAAAAAGTCGATGGGCAAGTTTTCGGCCAGCAGCTATTGCAACTGGAGTACTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCG +
Preference number: 5 (lower is better)
Translates to: YSKSRWASFRPAAIATGVLGEIV*IDGIQA
Trigger: CGCCTGAATGCCATCTATCAAAACAATCTCACCAAG...TACTCCAGTTGCAATAGCTGCTGGCCGAAAACTTGCCCATCGACTTTTTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGACCTCTATTGTGGGCTaGGGATCACTCGTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLTSIVG*GSLVKA
Trigger: AGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGACCACCTTTTCTTCCTaGTTAGCACAGACCATTTTC +
Preference number: 5 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTTTFSS*LAQTIF
Trigger: GAAAATGGTCTGTGCTAACAAGGAAGAAAAGGTGGT...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp TGTGATTATTTGTTTCATTTCAGAAGATCTATGGGTCCCACTGCCCGCCACACGATCCTTGAAGCAGCTTaGTTATATGCAGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: CDYLFHFRRSMGPTARHTILEAA*LYAEHS
Trigger: ACTGTGCTCTGCATATAACAAAGCTGCTTCAAGGAT...CGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAATGAAACAAATAATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp TCCACATACATCCCCAACTGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCTTCCACATTACCTTTTaGGGTACACATCCAACATTC +
Preference number: 5 (lower is better)
Translates to: STYIPNCIDAFDVGILEFFHITF*GTHPTF
Trigger: GAATGTTGGATGTGTACCCAAAAAGGTAATGTGGAA...GAATTCCAGAATACCAACGTCAAAGGCATCTATGCAGTTGGGGATGTATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAATCCTTGAAGCAGCTTaGTTATATGCAGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCIILEAA*LYAEHS
Trigger: ACTGTGCTCTGCATATAACAAAGCTGCTTCAAGGAT...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS TCA 90 bp ATTTACCCTCACAACTTGGAAAGCCATAATCAGCATGATCATGCATaGATTCAGAGTGGACAGCTGTGTTCCACATTACCTTTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: IYPHNLESHNQHDHA*IQSGQLCSTLPFWV
Trigger: TACCCAAAAAGGTAATGTGGAACACAGCTGTCCACTCTGAATTCATGCATGATCATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000523295.5
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
ENST00000643525.1
ENST00000643653.1
CDS CCA 90 bp CCGCTTTTCCTTAATAACACGCCAATTGAATTTACCCTCACAACTTaGAAAGCCATAATCAGCATGATCATGCATGAATTCAGAGTGGAC +
Preference number: 5 (lower is better)
Translates to: PLFLNNTPIEFTLTT*KAIISMIMHEFRVD
Trigger: GTCCACTCTGAATTCATGCATGATCATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAATTCAATTGGCGTGTTATTAAGGAAAAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000523295.5
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
ENST00000643525.1
ENST00000643653.1
CDS-3UTR CAA 90 bp AGCTATTGCAACTGGAGTAAGAAGAGCTTTTCCACATACATCCCCAACTGCATAATTTACCCTCACAACTaGGAAAGCCATAATCAGCAT +
Preference number: 5 (lower is better)
Translates to: SYCNWSKKSFSTYIPNCIIYPHN*ESHNQH
Trigger: ATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAAT...TATGCAGTTGGGGATGTATGTGGAAAAGCTCTTCTTACTCCAGTTGCAATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523295.5
ENST00000643653.1
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCG +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLLGEIV*IDGIQA
Trigger: CGCCTGAATGCCATCTATCAAAACAATCTCACCAAG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATAGCTCCTCCGTGCAGTaGGTGCTGATCATTGAATCA +
Preference number: 5 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHSSSVQ*VLIIES
Trigger: TGATTCAATGATCAGCACCAACTGCACGGAGGAGCT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATGTCTTTTTAACCTCCTaGACCTGGGAGAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHVFLTS*TWENFS
Trigger: GCTGAAGTTCTCCCAGGTCAAGGAGGTTAAAAAGAC...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp TGCATAGATGCCTTTGACGTTGGTATTCTGGAATTCGTCTACGATGATATGACCAAAAAGGTCTCATCCTaGAAGCAGCTTTGTTATATG +
Preference number: 5 (lower is better)
Translates to: CIDAFDVGILEFVYDDMTKKVSS*KQLCYM
Trigger: CATATAACAAAGCTGCTTCAAGGATGAGACCTTTTT...GGTCATATCATCGTAGACGAATTCCAGAATACCAACGTCAAAGGCATCTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGCAGAGGAAGGGACTTTaGATGTATTTGAATCCACCT +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLQRKGL*MYLNPP
Trigger: AGGTGGATTCAAATACATCAAAAGTCCCTTCCTCTG...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGTTCCACATTACCTTTTaGGGTACACATCCAACATTC +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLFHITF*GTHPTF
Trigger: GAATGTTGGATGTGTACCCAAAAAGGTAATGTGGAA...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGGGACTTTTGATGTATTaGAATCCACCTCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLGLLMY*NPPPSE
Trigger: TTCAGAAGGAGGTGGATTCAAATACATCAAAAGTCC...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221130.11
CDS-3UTR CAA 90 bp GCACTGTTTACATGTGAAGAATTGCCATCAACTTCTGTGAAAATTAGCAAGCTGAAAAAGGTCTCATCCTaGAAGCAGCTTTGTTATATG +
Preference number: 5 (lower is better)
Translates to: ALFTCEELPSTSVKISKLKKVSS*KQLCYM
Trigger: CATATAACAAAGCTGCTTCAAGGATGAGACCTTTTT...CAGCTTGCTAATTTTCACAGAAGTTGATGGCAATTCTTCACATGTAAACAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS-3UTR CAA 90 bp AAAATATATAAAGGTTCTGTGCACTGGCACTGTTTACATGTGAAGAATTGCCATATTTACCCTCACAACTaGGAAAGCCATAATCAGCAT +
Preference number: 5 (lower is better)
Translates to: KIYKGSVHWHCLHVKNCHIYPHN*ESHNQH
Trigger: ATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAAT...ATGGCAATTCTTCACATGTAAACAGTGCCAGTGCACAGAACCTTTATATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221130.11
ENST00000643653.1
CDS CCA 72 bp ACACGGCAAGACTCAGTTTGTTTAAACTCAGGTCCTTaGTATTCGGGACCCGCCCAATGGCCCAGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: TRQDSVCLNSGP*YSGPAQWPRAG
Trigger: GCCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGAGTCTTGCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS GCA 72 bp GACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGACCAGGC +
Preference number: 6 (lower is better)
Translates to: DLYCGLGITREG*MATDDFYMGPG
Trigger: GCCTGGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS CCA 72 bp TCTATTGTGGGCTTGGGATCACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATATGGGACCAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: SIVGLGSLVKAA*PRMISIWDQAW
Trigger: CCACGCCTGGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS CAA 72 bp AACACGGCAAGACTCAGTTTGTTTAAACTCAGGTCCTaGGTATTCGGGACCCGCCCAATGGCCCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: NTARLSLFKLRS*VFGTRPMAQSR
Trigger: CCTGCTCTGGGCCATTGGGCGGGTCCCGAATACCAAGGACCTGAGTTTAAACAAACTGAGTCTTGCCGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643525.1
CDS GCA 72 bp GACCTCTATTGTGGGCTTGGGATCACTCGTGAAGGCTaGATGGCCACGGATGATTTCTATATGGGACTTGGT +
Preference number: 6 (lower is better)
Translates to: DLYCGLGITREG*MATDDFYMGLG
Trigger: ACCAAGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
CDS CAA 72 bp GCACCAACAATGACGCTGCGGCTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCGGCTCACATAGGCATC +
Preference number: 6 (lower is better)
Translates to: APTMTLRLGEIV*IDGIQAAHIGI
Trigger: GATGCCTATGTGAGCCGCCTGAATGCCATCTATCAAAACAATCTCACCAAGCCGCAGCGTCATTGTTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523295.5
CDS CAA 90 bp TACCTTTTTGGGTACACATCCAACATTCACCTACTCAAGGTCGCCTaGGCTGCAATTCAGATCACCCGAAAATCCCAAAGCCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: YLFGYTSNIHLLKVA*AAIQITRKSQSPGC
Trigger: GCAGCCTGGGCTTTGGGATTTTCGGGTGATCTGAATTGCAGCCAAGGCGACCTTGAGTAGGTGAATGTTGGATGTGTACCCAAAAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521479.1
CDS CCA 72 bp TCTATTGTGGGCTTGGGATCACTCGTGAAGGCTGCATaGCCACGGATGATTTCTATATGGGACTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SIVGLGSLVKAA*PRMISIWDLVR
Trigger: TCTCACCAAGTCCCATATAGAAATCATCCGTGGCCATGCAGCCTTCACGAGTGATCCCAAGCCCACAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
CDS CCA 72 bp GGTACACATCCAACATTCACCTACTCAAGGTCGCCTTaGCTGCAATTCAGATCACCCGAAAATCCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: GTHPTFTYSRSP*LQFRSPENPKA
Trigger: GGCTTTGGGATTTTCGGGTGATCTGAATTGCAGCCAAGGCGACCTTGAGTAGGTGAATGTTGGATGTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521479.1
ENST00000643525.1
CDS CAA 72 bp GGGTACACATCCAACATTCACCTACTCAAGGTCGCCTaGGCTGCAATTCAGATCACCCGAAAATCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: GYTSNIHLLKVA*AAIQITRKSQS
Trigger: GCTTTGGGATTTTCGGGTGATCTGAATTGCAGCCAAGGCGACCTTGAGTAGGTGAATGTTGGATGTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521479.1
ENST00000643525.1
CDS CAA 72 bp ACGGATGATTTCTATATGGGACTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCGGCTCACATAGGCATC +
Preference number: 6 (lower is better)
Translates to: TDDFYMGLGEIV*IDGIQAAHIGI
Trigger: GATGCCTATGTGAGCCGCCTGAATGCCATCTATCAAAACAATCTCACCAAGTCCCATATAGAAATCATCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
CDS TCA 72 bp CACAACTTGGAAAGCCATAATCAGCATGATCATGCATaGATTCAGAGTGGACAGCTGTGTTCCACATTACCT +
Preference number: 6 (lower is better)
Translates to: HNLESHNQHDHA*IQSGQLCSTLP
Trigger: AGGTAATGTGGAACACAGCTGTCCACTCTGAATTCATGCATGATCATGCTGATTATGGCTTTCCAAGTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000523295.5
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
ENST00000643525.1
ENST00000643653.1
CDS CAA 72 bp TTAATGACTTCATCTGCAATGCTTGGTGAGATTGTTTaGATAGATGGCATTCAGGCGGCTCACATAGGCATC +
Preference number: 6 (lower is better)
Translates to: LMTSSAMLGEIV*IDGIQAAHIGI
Trigger: GATGCCTATGTGAGCCGCCTGAATGCCATCTATCAAAACAATCTCACCAAGCATTGCAGATGAAGTCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643653.1
CDS CCA 72 bp CTTAATAACACGCCAATTGAATTTACCCTCACAACTTaGAAAGCCATAATCAGCATGATCATGCATGAATTC +
Preference number: 6 (lower is better)
Translates to: LNNTPIEFTLTT*KAIISMIMHEF
Trigger: GAATTCATGCATGATCATGCTGATTATGGCTTTCCAAGTTGTGAGGGTAAATTCAATTGGCGTGTTATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221130.11
ENST00000521479.1
ENST00000523295.5
ENST00000537535.5
ENST00000541648.5
ENST00000546342.5
ENST00000643525.1
ENST00000643653.1