RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSK3B (Homo sapiens)

Ensembl gene IDs: ENSG00000082701

Ensembl transcript IDs: ENST00000264235.13, ENST00000316626.6, ENST00000650344.2, ENST00000676566.1, ENST00000676650.1, ENST00000676722.1, ENST00000676733.1, ENST00000676743.1, ENST00000676775.1, ENST00000676844.1, ENST00000676910.1, ENST00000676948.1, ENST00000677034.1, ENST00000677046.1, ENST00000677069.1, ENST00000677128.1, ENST00000677169.1, ENST00000677338.1, ENST00000677423.1, ENST00000677483.1, ENST00000677502.1, ENST00000677530.1, ENST00000677648.1, ENST00000677788.1, ENST00000677870.1, ENST00000677878.1, ENST00000677903.1, ENST00000677995.1, ENST00000678013.1, ENST00000678064.1, ENST00000678121.1, ENST00000678245.1, ENST00000678350.1, ENST00000678377.1, ENST00000678439.1, ENST00000678561.1, ENST00000678608.1, ENST00000678678.1, ENST00000678787.1, ENST00000679068.1, ENST00000679085.1, ENST00000679131.1, ENST00000679201.1

Found 896 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGATGTATCCCTGACCTGTCCCCTTCCTCTGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAGCCTGCTCAACACCCCTTCCATCTC +
Preference number: 1 (lower is better)
Translates to: RCIPDLSPSSGLISL*PQQLAQPAQHPFHL
Trigger: GAGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCCAGAGGAAGGGGACAGGTCAGGGATACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 90 bp GCAAACAAAGAGCCACCTGTAGAGCATGTGTGCCTGAGTCTTGCTTaGTGCTTCCCCTCTGGCAGCCTCCTGTACAAGCCTCTACATCAC +
Preference number: 1 (lower is better)
Translates to: ANKEPPVEHVCLSLA*CFPSGSLLYKPLHH
Trigger: GTGATGTAGAGGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGTGGCTCTTTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 90 bp ACCTGTAGAGCATGTGTGCCTGAGTCTTGCTTGCTGCTTCCCCTCTaGCAGCCTCCTGTACAAGCCTCTACATCACTAGCACTAACTGAG +
Preference number: 1 (lower is better)
Translates to: TCRACVPESCLLLPL*QPPVQASTSLALTE
Trigger: CTCAGTTAGTGCTAGTGATGTAGAGGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 90 bp CTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAATGCAGGTCCATTTCTCTATCACAG +
Preference number: 1 (lower is better)
Translates to: LGSIPRPEQCLHPNA*WAVGSECRSISLSQ
Trigger: CTGTGATAGAGAAATGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 90 bp GGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTGCTaGGCAGTTGGATCTGAATGCAGGTCCATTTCTCTATCACAGACC +
Preference number: 1 (lower is better)
Translates to: GSIPRPEQCLHPNAC*AVGSECRSISLSQT
Trigger: GGTCTGTGATAGAGAAATGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 90 bp GATTTTTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGGCAGTTGGATCTGAATGCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: DFYGLWGVYHVQSSV*IQTLAGQLDLNAGP
Trigger: TGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 90 bp CAGCGAGTGAAAACCAAGATGGCTCACAGTTGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGGACAACTCTCTTGGAGAGTCACACA +
Preference number: 1 (lower is better)
Translates to: QRVKTKMAHSCLSGY*FTSAGRTTLLESHT
Trigger: TGTGTGACTCTCCAAGAGAGTTGTCCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGAGCCATCTTGGTTTTCACTCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR TCA 90 bp GCTCCCTGGTGCTACACTAAGTCCCTGAATGGACTAAGTATGAAATaGAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCAGAACC +
Preference number: 1 (lower is better)
Translates to: APWCYTKSLNGLSMK*NRSHCYRGGKTFRT
Trigger: GGTTCTGAATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCATTCAGGGACTTAGTGTAGCACCAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR TCA 90 bp AGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCTCATATAGGCAGCTGCCCCGCTGTG +
Preference number: 1 (lower is better)
Translates to: RNNAIGLCYSDLAFS*SGALDSHIGSCPAV
Trigger: CACAGCGGGGCAGCTGCCTATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678350.1
3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTaGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATA +
Preference number: 1 (lower is better)
Translates to: HHPVLEMSRLKHNMC*LPGRYSPTVRGVHI
Trigger: TATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR GCA 90 bp CCTCCCTGGGTTACGAATGATACACATTTCTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGCAAGTCTATAAATACCCGAAGATAT +
Preference number: 1 (lower is better)
Translates to: PPWVTNDTHFFVCHT*HQHAKGKSINTRRY
Trigger: ATATCTTCGGGTATTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCATTCGTAACCCAGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 90 bp GTGTCTGCAAAGCTTCCTCTACATCAAATCCAAAGGTTTCCAAGGTaGAAGCTGCACCTCTTGGGGCTACACAATGGAATAAAATCATTG +
Preference number: 1 (lower is better)
Translates to: VSAKLPLHQIQRFPR*KLHLLGLHNGIKSL
Trigger: CAATGATTTTATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTGGATTTGATGTAGAGGAAGCTTTGCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CCA 90 bp AGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTaGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAG +
Preference number: 1 (lower is better)
Translates to: SIGNEQTQTQHVLVT*EVQPHCSWCPYILQ
Trigger: CTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR TCA 90 bp CCTCTGGCAGCCTCCTGTACAAGCCTCTACATCACTAGCACTAACTaGGAGCAAAACAAAACCTTAACAAATCTACTAAGAATCTTCCCT +
Preference number: 1 (lower is better)
Translates to: PLAASCTSLYITSTN*EQNKTLTNLLRIFP
Trigger: AGGGAAGATTCTTAGTAGATTTGTTAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGATGTAGAGGCTTGTACAGGAGGCTGCCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 90 bp CTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTaGTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCTATGTGTAGT +
Preference number: 1 (lower is better)
Translates to: LPFCELSLQSVNCFL*CAEAFYLDVVPMCS
Trigger: ACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
3UTR TCA 90 bp ACTAAGAGACATAACATGTTTACATACATCATCCAGTATTGGAAATaGGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACA +
Preference number: 1 (lower is better)
Translates to: TKRHNMFTYIIQYWK*ADSNTTCVGYLGGT
Trigger: TGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATGTATGTAAACATGTTATGTCTCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR GCA 90 bp GTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATAAATaGAAATTTTACAGGCAAGCAGATTTTCATACAACTATCTGTATC +
Preference number: 1 (lower is better)
Translates to: VCVQAQVIHRQHIYK*KFYRQADFHTTICI
Trigger: GATACAGATAGTTGTATGAAAATCTGCTTGCCTGTAAAATTTGCATTTATAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACTGAGTCTTGCTTGCTaGTTCCCCTCTGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPLSLAC*FPSGSL
Trigger: GAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCAGGGTGCTAGGGCCTaGAGGAGGGCTGCCAACAGA +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPQGARA*RRAANR
Trigger: TCTGTTGGCAGCCCTCCTGCAGGCCCTAGCACCCTG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CAA 90 bp GGCAAACAAAGAGCCACCTGTAGAGCATGTGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAGCCTCCTGTACAAGCCTCTACATCA +
Preference number: 2 (lower is better)
Translates to: GKQRATCRACVPESC*LLPLWQPPVQASTS
Trigger: TGATGTAGAGGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGTGGCTCTTTGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGGTGAGATGTATCCCTaGCCTGTCCCCTTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAGEMYP*PVPFLW
Trigger: CCAGAGGAAGGGGACAGGTCAGGGATACATCTCACC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 2 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCTGAGTCTTGCTTGCTaGTTCCCCTCTGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVLSLAC*FPSGSL
Trigger: GAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTGCCTGAGTCTTGCTTaGTGCTTCCCCTCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPCLSLA*CFPSGS
Trigger: GCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTGTGTGCCTGAGTCTTaGTTGCTGCTTCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNACVPES*LLLPLW
Trigger: CCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAAACTGTGCTAAGATTTaGAAAGAACTTTGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPNCAKI*KELWSG
Trigger: GCCTGACCAAAGTTCTTTGCAAATCTTAGCACAGTT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCCATGGGCTCAGCTCTaGAGCCCTACAGTTACCAGC +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTPWAQL*SPTVTS
Trigger: GCTGGTAACTGTAGGGCTGCAGAGCTGAGCCCATGG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTTCCAAGGTGGAAGCTaGACCTCTTGGGGCTACACA +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPFQGGS*TSWGYT
Trigger: TGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAACAAAAACTCTTAACTaGGTGTGGGGGAAACATTCT +
Preference number: 2 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPTKTLN*VWGKHS
Trigger: AGAATGTTTCCCCCACACCCAGTTAAGAGTTTTTGT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCACTTCCGAACCCTCTaGAGGACGAGACCCATAAAG +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPHFRTL*RTRPIK
Trigger: CTTTATGGGTCTCGTCCTCCAGAGGGTTCGGAAGTG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGACAACAGTCCTCTATTaGCACGGTGGCACTCCGTGC +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVTTVLY*HGGTPC
Trigger: GCACGGAGTGCCACCGTGCCAATAGAGGACTGTTGT...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTGTGTGCCTGAGTCTTaGTTGCTGCTTCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTCVPES*LLLPLW
Trigger: CCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPCLSGY*FTSAGR
Trigger: CCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAAAGGTTTCCAAGGTaGAAGCTGCACCTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPQRFPR*KLHLLG
Trigger: CCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCATATCCAGAGGTTTGTaGAACCCCTTTTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPISRGL*NPFCGP
Trigger: TGGGCCACAAAAGGGGTTTCACAAACCTCTGGATAT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTCTAGGGCTCCCTGGTaGTACACTAAGTCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPSRAPW*YTKSLN
Trigger: ATTCAGGGACTTAGTGTAGCACCAGGGAGCCCTAGA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCATATCCAGAGGTTTGTaGAACCCCTTTTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPISRGL*NPFCGP
Trigger: TGGGCCACAAAAGGGGTTTCACAAACCTCTGGATAT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTT +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTVYRPK*SIGNTF
Trigger: AAATGTGTTGCCGATGGATCACTTGGGCCTGTACAC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGCAGCTAGCTCAGCCTaGTCAACACCCCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLAASSA*STPLPS
Trigger: AGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTGCAGTCTTCTGCCTTaGTGGAATGAACACACGATG +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPCSLLP*WNEHTM
Trigger: CATCGTGTGTTCATTCCAGCAAGGCAGAAGACTGCA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGGCAGGACAACTCTCTTaGAGAGTCACACACACAGTT +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVAGQLS*RVTHTV
Trigger: AACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGC...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCCCAGGTCACTAGTTTaGAACTGTGCTAAGATTTGC +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAPRSLV*NCAKIC
Trigger: GCAAATCTTAGCACAGTTTCAAACTAGTGACCTGGG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCCAGGTCACTAGTTTaGAACTGTGCTAAGATTTGC +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPPRSLV*NCAKIC
Trigger: GCAAATCTTAGCACAGTTTCAAACTAGTGACCTGGG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCACAGAATCACTGCCCTaGACAGTAACTTTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPTESLP*TVTFCS
Trigger: TGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTTGGTGCAGACAAGATaGCTGGTTAGGCATACATTG +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLVQTR*LVRHTL
Trigger: CAATGTATGCCTAACCAGTCATCTTGTCTGCACCAA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCACGGAGCAACAAACTTaGATAAAACGGCATAACCCT +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPTEQQT*IKRHNP
Trigger: AGGGTTATGCCGTTTTATTCAAGTTTGTTGCTCCGT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCACCTGCCACCAACATaGCAAAGGCAAGTCTATAAA +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVHLPPT*QRQVYK
Trigger: TTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTGAAACCCCTTTTGTaGCCCAAGACCTCAGCTAAA +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTVKPLL*PKTSAK
Trigger: TTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCAC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTCCCTGGGTTACGAATaGTACACATTTCTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASLGYE*YTFLCL
Trigger: CAGACAAAGAAATGTGTATCATTCGTAACCCAGGGA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAACGAGACCCATAAAGTaGCCTAAGGTGGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLTRPIK*PKVAMR
Trigger: CCTCATTGCCACCTTAGGTCACTTTATGGGTCTCGT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCACGGAGCAACAAACTTaGATAAAACGGCATAACCCT +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPTEQQT*IKRHNP
Trigger: AGGGTTATGCCGTTTTATTCAAGTTTGTTGCTCCGT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATGCCTGAGTCTTGCTTaGTGCTTCCCCTCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSICLSLA*CFPSGS
Trigger: GCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAACTGTGCTAAGATTTaGAAAGAACTTTGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPNCAKI*KELWSG
Trigger: GCCTGACCAAAGTTCTTTGCAAATCTTAGCACAGTT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGCAGTTGGATCTGAATaGAGGTCCATTTCTCTATCA +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAAVGSE*RSISLS
Trigger: TGATAGAGAAATGGACCTGCATTCAGATCCAACTGC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCCTGTCCCCTTCCTCTaGGCTCATCAGCCTTTGACC +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWPVPFL*AHQPLT
Trigger: GGTCAAAGGCTGATGAGCCCAGAGGAAGGGGACAGG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLCLSGY*FTSAGR
Trigger: CCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACATCCAAACGCTTGCTaGGCAGTTGGATCTGAATGC +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLHPNAC*AVGSEC
Trigger: GCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCAGAAACCTTTGCATTaGTGCAGACAAGATGACTGG +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTQKPLH*CRQDDW
Trigger: CCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CAA 90 bp ACATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTaGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATAT +
Preference number: 2 (lower is better)
Translates to: TSSSIGNEQTQTQHV*VTWEVQPHCSWCPY
Trigger: ATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPLIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCATGAAATTACGAATATaGTTTCCTCTTCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPMKLRI*FPLPTP
Trigger: AGGAGTGGGAAGAGGAAATCATATTCGTAATTTCAT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTCTGCCTTGCTGGAATaGACACACGATGTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTSALLE*THDVSK
Trigger: TTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGCAGCTAGCTCAGCCTaGTCAACACCCCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWAASSA*STPLPS
Trigger: AGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIVQSSV*IQTLAG
Trigger: CCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGAC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGAAGGTGCAGTCTTCTaGCTTGCTGGAATGAACACA +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLEGAVF*LAGMNT
Trigger: TGTGTTCATTCCAGCAAGGCAGAAGACTGCACCTTC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTTTTATTGCAGAGGTaGAAAACGGAGCAACAAACT +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLLLQR*KTEQQT
Trigger: AGTTTGTTGCTCCGTTTTGCACCTCTGCAATAAAAG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAAGCTCTAGGGCTCCCTaGTGCTACACTAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISSRAP*CYTKSL
Trigger: CAGGGACTTAGTGTAGCACCAGGGAGCCCTAGAGCT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp AACAAGAGGTTCTGCGGTTTAATATCCCGATGGCAGATTCCAAAGGAATGGATACAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: NKRFCGLISRWQIPKEWIQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...TATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCGCAGAACCTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
3UTR-3UTR CCA 90 bp CCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACAAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 2 (lower is better)
Translates to: PHHYPLEILVVLVTAQPTRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...TGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676733.1
3UTR-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGCATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTATCACTAGCACTAACTaGGAGCAAAACAAAACCTTA +
Preference number: 2 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAITSTN*EQNKTL
Trigger: TAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGAT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCTTAACATCGTTCACTaGTACACAAAGAAAACAGAC +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVLNIVH*YTKKTD
Trigger: GTCTGTTTTCTTTGTGTATCAGTGAACGATGTTAAG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGATGAAATTACGAATATaGTTTCCTCTTCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVMKLRI*FPLPTP
Trigger: AGGAGTGGGAAGAGGAAATCATATTCGTAATTTCAT...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTACAAAAACTCTTAACTaGGTGTGGGGGAAACATTCT +
Preference number: 2 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTTKTLN*VWGKHS
Trigger: AGAATGTTTCCCCCACACCCAGTTAAGAGTTTTTGT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCACTTCCGAACCCTCTaGAGGACGAGACCCATAAAG +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWHFRTL*RTRPIK
Trigger: CTTTATGGGTCTCGTCCTCCAGAGGGTTCGGAAGTG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGTGAAACCCCTTTTGTaGCCCAAGACCTCAGCTAAA +
Preference number: 2 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIVKPLL*PKTSAK
Trigger: TTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCAC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGAGAGAGAGAGAGCATaGAAGGCTCCCAGAATCTGC +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPERERA*KAPRIC
Trigger: GCAGATTCTGGGAGCCTTCCATGCTCTCTCTCTCTC...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGAGAGAGAGAGAGCATaGAAGGCTCCCAGAATCTGC +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWERERA*KAPRIC
Trigger: GCAGATTCTGGGAGCCTTCCATGCTCTCTCTCTCTC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTGGCCAAACTTCCTTTaGAAGATTCCAAAGTTAAAT +
Preference number: 2 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPWPNFL*KIPKLN
Trigger: ATTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTCTTTTATTTTCAGTaGCTCAGGTTTCTACCAGAA +
Preference number: 2 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLFYFQ*LRFLPE
Trigger: TTCTGGTAGAAACCTGAGCCACTGAAAATAAAAGAG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp GAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 2 (lower is better)
Translates to: ERLFGSTIVSGNSVYCFRLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...CCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
3UTR-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTCCCTGGGTTACGAATaGTACACATTTCTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSLGYE*YTFLCL
Trigger: CAGACAAAGAAATGTGTATCATTCGTAACCCAGGGA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTT +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPVYRPK*SIGNTF
Trigger: AAATGTGTTGCCGATGGATCACTTGGGCCTGTACAC...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp AAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 2 (lower is better)
Translates to: KSQGASVWLDYSVWQLCIRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...TATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
3UTR-3UTR TCA 90 bp ACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 2 (lower is better)
Translates to: TDPHHYPLEILVVLVTAQIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...CTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
3UTR-3UTR TCA 90 bp CCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 2 (lower is better)
Translates to: PTDPHHYPLEILVVLVTAIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...AGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
3UTR-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGCAGCTAGCTCAGCCTaGTCAACACCCCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGAASSA*STPLPS
Trigger: AGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAA +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWLHPNA*WAVGSE
Trigger: TTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGACTCTTAACTGGGTGTaGGGGAAACATTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQTLNWV*GKHSSH
Trigger: ATGAGAAGAATGTTTCCCCCACACCCAGTTAAGAGT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTCACAGTTGTCTTTCTaGGTACTGGTTCACTTCAGC +
Preference number: 2 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDISQLSF*VLVHFS
Trigger: GCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACATCCAAACGCTTGCTaGGCAGTTGGATCTGAATGC +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIHPNAC*AVGSEC
Trigger: GCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 2 (lower is better)
Translates to: HKSQGASVWLDYSVWQLCLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...ACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
3UTR-3UTR CCA 90 bp GGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 2 (lower is better)
Translates to: GSTIVSGNSVYCFRNIVQLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...CTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
3UTR-3UTR CCA 90 bp CGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 2 (lower is better)
Translates to: RLFGSTIVSGNSVYCFRNLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...GTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
3UTR-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAAAAATGATATTTCATTaGGCAAGGGTAGAGATGGCG +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLKMIFH*ARVEMA
Trigger: CGCCATCTCTACCCTTGCTCAATGAAATATCATTTT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp TTCATTTACTGTATCTCTTTCAGTACCAAATCTGAGGCCCTAAAGGAGAAATATTGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 2 (lower is better)
Translates to: FIYCISFSTKSEALKEKYWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...ATATTTCTCCTTTAGGGCCTCAGATTTGGTACTGAAAGAGATACAGTAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679068.1
3UTR-3UTR GCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGAACTGTGCTAAGATTTaGAAAGAACTTTGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQNCAKI*KELWSG
Trigger: GCCTGACCAAAGTTCTTTGCAAATCTTAGCACAGTT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAAAACCTTTGCATTGGTaGAGACAAGATGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLKPLHW*RQDDWL
Trigger: TAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCACTTCCGAACCCTCTaGAGGACGAGACCCATAAAG +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGHFRTL*RTRPIK
Trigger: CTTTATGGGTCTCGTCCTCCAGAGGGTTCGGAAGTG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCAAGCTTTCTCATGATCTaGAGCTCTCGATTCTCATAT +
Preference number: 2 (lower is better)
Translates to: LDYSVWQLCILFPEHSPASFLMI*SSRFSY
Trigger: ATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCT...TGCTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
3UTR-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGATCACTAGCACTAACTaGGAGCAAAACAAAACCTTA +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQITSTN*EQNKTL
Trigger: TAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGAT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCCCAGGTCACTAGTTTaGAACTGTGCTAAGATTTGC +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWPRSLV*NCAKIC
Trigger: GCAAATCTTAGCACAGTTTCAAACTAGTGACCTGGG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTACTTATTCACAGTGGTaGGATGTATCCCTGACCTGT +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPTYSQW*DVSLTC
Trigger: ACAGGTCAGGGATACATCTCACCACTGTGAATAAGT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACGAGACCCATAAAGTaGCCTAAGGTGGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTRPIK*PKVAMR
Trigger: CCTCATTGCCACCTTAGGTCACTTTATGGGTCTCGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAACACATTTCTTTGTCTaGCACACCTGCCACCAACAT +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSITHFFV*HTCHQH
Trigger: ATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGACTATGTGTAGAATGTaGCTATTTCTGCAAGCTCAA +
Preference number: 2 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQTMCRM*LFLQAQ
Trigger: TTGAGCTTGCAGAAATAGCCACATTCTACACATAGT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGCLSGY*FTSAGR
Trigger: CCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGATTTTTATGGACTCTaGGGAGTATACCACGTCCAG +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWDFYGL*GVYHVQ
Trigger: CTGGACGTGGTATACTCCCCAGAGTCCATAAAAATC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTCAGAAACCTTTGCATTaGTGCAGACAAGATGACTGG +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPQKPLH*CRQDDW
Trigger: CCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTG...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTAAATTCCTGGGGATCTaGCATTGGCCAAACTTCCTT +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPKFLGI*HWPNFL
Trigger: AAGGAAGTTTGGCCAATGCCAGATCCCCAGGAATTT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAAGTTCCAAACTTTATTaGCCTCCCTGGGTTACGAAT +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISSKLY*PPWVTN
Trigger: ATTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDILIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATCTCTATCACAGACCTaGCTTTTCAGATTCTTTATA +
Preference number: 2 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSLSQT*LFRFFI
Trigger: TATAAAGAATCTGAAAAGGCAGGTCTGTGATAGAGA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGCAGTTGGATCTGAATaGAGGTCCATTTCTCTATCA +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIAVGSE*RSISLS
Trigger: TGATAGAGAAATGGACCTGCATTCAGATCCAACTGC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGCAGGACAACTCTCTTaGAGAGTCACACACACAGTT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGAGQLS*RVTHTV
Trigger: AACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 2 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLALSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
3UTR-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGCACACACAATGAAATaGGAGAAAAGCGTGACTTTT +
Preference number: 2 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWAHTMK*EKSVTF
Trigger: AAAAGTCACGCTTTTCTCTCATTTCATTGTGTGTGC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCTGTGATCCCACCATaGTCCTTGAGAAAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISVIPP*SLRKKN
Trigger: ATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp TCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTACTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 2 (lower is better)
Translates to: SHHWSRRNNAIGLCYSDLLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...TAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
3UTR-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCAGTTCCAAACTTTATTaGCCTCCCTGGGTTACGAAT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGSSKLY*PPWVTN
Trigger: ATTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAATCACTAGCACTAACTaGGAGCAAAACAAAACCTTA +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIITSTN*EQNKTL
Trigger: TAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGAT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPLIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACAGAATCACTGCCCTaGACAGTAACTTTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTESLP*TVTFCS
Trigger: TGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR TCA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 2 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
3UTR-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPSFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 2 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACTCTTAACTGGGTGTaGGGGAAACATTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTLNWV*GKHSSH
Trigger: ATGAGAAGAATGTTTCCCCCACACCCAGTTAAGAGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTCTCTTTTATTTTCAGTaGCTCAGGTTTCTACCAGAA +
Preference number: 2 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPLFYFQ*LRFLPE
Trigger: TTCTGGTAGAAACCTGAGCCACTGAAAATAAAAGAG...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTCTGTGATCCCACCATaGTCCTTGAGAAAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGSVIPP*SLRKKN
Trigger: ATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACAAAAACTCTTAACTaGGTGTGGGGGAAACATTCT +
Preference number: 2 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTKTLN*VWGKHS
Trigger: AGAATGTTTCCCCCACACCCAGTTAAGAGTTTTTGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CCA 90 bp CTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCACTTTTTATCTTGATGTaGTCCCTATGTGTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LPFCELSLQSVNCFLCCALFILM*SLCVVS
Trigger: AGAAACTACACATAGGGACCACATCAAGATAAAAAG...TGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
3UTR-3UTR CCA 90 bp TCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCAGCTTTTTATCTTGATGTaGTCCCTATGTGTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SHFVNCLFSLLTVSFAVQLFILM*SLCVVS
Trigger: AGAAACTACACATAGGGACCACATCAAGATAAAAAG...CTGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
3UTR-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATGGGCTCATCAGCCTTaGACCTCAGCAGCTAGCTCA +
Preference number: 3 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPWAHQP*TSAASS
Trigger: TGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCCA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp GAGCCACCTGTAGAGCATGTGTGCCTGAGTCTTGCTTaGTGCTTCCCCTCTGGCAGCCTCCTGTACAAGCCT +
Preference number: 3 (lower is better)
Translates to: EPPVEHVCLSLA*CFPSGSLLYKP
Trigger: AGGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp CCACCTGTAGAGCATGTGTGCCTGAGTCTTGCTTGCTaGTTCCCCTCTGGCAGCCTCCTGTACAAGCCTCTA +
Preference number: 3 (lower is better)
Translates to: PPVEHVCLSLAC*FPSGSLLYKPL
Trigger: TAGAGGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAVPESC*LLPLWQ
Trigger: CTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCAC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAACAACAGTCCTCTATaGGCACGGTGGCACTCCGTG +
Preference number: 3 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPNNSPL*ARWHSV
Trigger: CACGGAGTGCCACCGTGCCAATAGAGGACTGTTGTT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR GCA 72 bp GGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGGCAGTTGGATCTGAAT +
Preference number: 3 (lower is better)
Translates to: GLWGVYHVQSSV*IQTLAGQLDLN
Trigger: ATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGCAGGACAACTCTCTaGGAGAGTCACACACACAGT +
Preference number: 3 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGRTTL*ESHTHS
Trigger: ACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGCC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CCA 72 bp GGTACTGGTTCACTTCAGCAGGCAGGACAACTCTCTTaGAGAGTCACACACACAGTTAAGGAGCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: GTGSLQQAGQLS*RVTHTVKEQDR
Trigger: CCTGTCCTGCTCCTTAACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGCCTGCTGAAGTGAACCAGTACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTAGTTACCAGCTAACCTaGGAAGGCATGTGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTSYQLT*EGMWGR
Trigger: CCTTCCCCACATGCCTTCCAAGGTTAGCTGGTAACT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR TCA 72 bp CTGGACAAACTTATTCACAGTGGTGAGATGTATCCCTaGCCTGTCCCCTTCCTCTGGGCTCATCAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: LDKLIHSGEMYP*PVPFLWAHQPL
Trigger: CAAAGGCTGATGAGCCCAGAGGAAGGGGACAGGTCAGGGATACATCTCACCACTGTGAATAAGTTTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp ATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAATGCAGGTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: IPRPEQCLHPNA*WAVGSECRSIS
Trigger: AGAAATGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGACGTGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGGTGAAGGAAGAGGGTaGGGTACTGAAATAAAGACC +
Preference number: 3 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPGEGRG*GTEIKT
Trigger: GGTCTTTATTTCAGTACCCAACCCTCTTCCTTCACC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTGGAAGCTGCACCTCTaGGGGCTACACAATGGAATA +
Preference number: 3 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTWKLHL*GLHNGI
Trigger: TATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR TCA 72 bp CCCTTTTGTGGCCCAAGACCTCAGCTAAACAGCGAGTaGAAACCAAGATGGCTCACAGTTGTCTTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: PFCGPRPQLNSE*KPRWLTVVFLG
Trigger: ACCCAGAAAGACAACTGTGAGCCATCTTGGTTTTCACTCGCTGTTTAGCTGAGGTCTTGGGCCACAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp CCTCCCTGGGTTACGAATGATACACATTTCTTTGTCTaGCACACCTGCCACCAACATGCCAAAGGCAAGTCT +
Preference number: 3 (lower is better)
Translates to: PPWVTNDTHFFV*HTCHQHAKGKS
Trigger: AGACTTGCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCATTCGTAACCCAGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp CTGCATCCAAACGCTTGCTGGGCAGTTGGATCTGAATaGAGGTCCATTTCTCTATCACAGACCTGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: LHPNACWAVGSE*RSISLSQTCLF
Trigger: GAAAAGGCAGGTCTGTGATAGAGAAATGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 72 bp GCGAGTGAAAACCAAGATGGCTCACAGTTGTCTTTCTaGGTACTGGTTCACTTCAGCAGGCAGGACAACTCT +
Preference number: 3 (lower is better)
Translates to: ASENQDGSQLSF*VLVHFSRQDNS
Trigger: AGAGTTGTCCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGAGCCATCTTGGTTTTCACTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIVPESC*LLPLWQ
Trigger: CTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCAC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAAGTTACCAGCTAACCTaGGAAGGCATGTGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSYQLT*EGMWGR
Trigger: CCTTCCCCACATGCCTTCCAAGGTTAGCTGGTAACT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCAAGATGGCTCACAGTaGTCTTTCTGGGTACTGGTT +
Preference number: 3 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTQDGSQ*SFWVLV
Trigger: AACCAGTACCCAGAAAGACAACTGTGAGCCATCTTG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CCA 72 bp AAAACCAAGATGGCTCACAGTTGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGGACAACTCTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: KTKMAHSCLSGY*FTSAGRTTLLE
Trigger: CTCCAAGAGAGTTGTCCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGAGCCATCTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 72 bp AATGAGCAGACTCAAACACAACATGTGTTGGTTACCTaGGAGGTACAGCCCCACTGTTCGTGGTGTCCATAT +
Preference number: 3 (lower is better)
Translates to: NEQTQTQHVLVT*EVQPHCSWCPY
Trigger: ATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CCA 72 bp TCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTTCCGGAACATAGTCCA +
Preference number: 3 (lower is better)
Translates to: SQGASVWLDYSV*QLCILFPEHSP
Trigger: TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
3UTR-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 3 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGTACTGGTTGTCATTTaGCTTTTATTGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPVLVVI*LLLQRC
Trigger: GCACCTCTGCAATAAAAGCAAAATGACAACCAGTAC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAATGATACACATTTCTTaGTCTGCCACACCTGCCACC +
Preference number: 3 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLMIHIS*SATPAT
Trigger: GGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCAT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTGGGCTCATCAGCCTTaGACCTCAGCAGCTAGCTCA +
Preference number: 3 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPWAHQP*TSAASS
Trigger: TGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCCA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTACGCTTGCTGGGCAGTaGGATCTGAATGCAGGTCCA +
Preference number: 3 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPTLAGQ*DLNAGP
Trigger: TGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCAGTGTTTGCAATAGTTaGTATACAACCCACAGTCCT +
Preference number: 3 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPSVCNS*YTTHSP
Trigger: AGGACTGTGGGTTGTATACAAACTATTGCAAACACT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp GATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 3 (lower is better)
Translates to: DYFYQLIHTTIPWKYWLSQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...GGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676733.1
3UTR TCA 72 bp TGCTACACTAAGTCCCTGAATGGACTAAGTATGAAATaGAACCGGTCTCACTGCTACCGAGGAGGAAAGACA +
Preference number: 3 (lower is better)
Translates to: CYTKSLNGLSMK*NRSHCYRGGKT
Trigger: TGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCATTCAGGGACTTAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCTCATATAGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDSHIGSC
Trigger: GCAGCTGCCTATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
3UTR GCA 72 bp TCTCAGCACACACACACACACACACACACGCACACATaGACACACAATGAAATGAGAGAAAAGCGTGACTTT +
Preference number: 3 (lower is better)
Translates to: SQHTHTHTHTHT*THNEMREKRDF
Trigger: AAAGTCACGCTTTTCTCTCATTTCATTGTGTGTGCATGTGTGCGTGTGTGTGTGTGTGTGTGTGTGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp ATCTATTCGATATCCTCCAGCTCTAGGGCTCCCTGGTaGTACACTAAGTCCCTGAATGGACTAAGTATGAAA +
Preference number: 3 (lower is better)
Translates to: IYSISSSSRAPW*YTKSLNGLSMK
Trigger: TTTCATACTTAGTCCATTCAGGGACTTAGTGTAGCACCAGGGAGCCCTAGAGCTGGAGGATATCGAATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 72 bp TTAATCTATTCGATATCCTCCAGCTCTAGGGCTCCCTaGTGCTACACTAAGTCCCTGAATGGACTAAGTATG +
Preference number: 3 (lower is better)
Translates to: LIYSISSSSRAP*CYTKSLNGLSM
Trigger: CATACTTAGTCCATTCAGGGACTTAGTGTAGCACCAGGGAGCCCTAGAGCTGGAGGATATCGAATAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CCA 72 bp AAGCTTCCTCTACATCAAATCCAAAGGTTTCCAAGGTaGAAGCTGCACCTCTTGGGGCTACACAATGGAATA +
Preference number: 3 (lower is better)
Translates to: KLPLHQIQRFPR*KLHLLGLHNGI
Trigger: TATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTGGATTTGATGTAGAGGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR GCA 72 bp TACACATTTCTTTGTCTGCCACACCTGCCACCAACATaGCAAAGGCAAGTCTATAAATACCCGAAGATATGG +
Preference number: 3 (lower is better)
Translates to: YTFLCLPHLPPT*QRQVYKYPKIW
Trigger: CCATATCTTCGGGTATTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 3 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATGATACACATTTCTTaGTCTGCCACACCTGCCACC +
Preference number: 3 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPMIHIS*SATPAT
Trigger: GGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCAAGATGGCTCACAGTaGTCTTTCTGGGTACTGGTT +
Preference number: 3 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWQDGSQ*SFWVLV
Trigger: AACCAGTACCCAGAAAGACAACTGTGAGCCATCTTG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
3UTR TCA 72 bp TCCTTTCTCATAAACTCTGATATATCCAGAGGTTTGTaGAACCCCTTTTGTGGCCCAAGACCTCAGCTAAAC +
Preference number: 3 (lower is better)
Translates to: SFLINSDISRGL*NPFCGPRPQLN
Trigger: GTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATATCAGAGTTTATGAGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp GTTACGAATGATACACATTTCTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGCAAGTCTATAAATACC +
Preference number: 3 (lower is better)
Translates to: VTNDTHFFVCHT*HQHAKGKSINT
Trigger: GGTATTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCATTCGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 3 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGAGTTCCAAACTTTATaGACCTCCCTGGGTTACGAA +
Preference number: 3 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWEFQTL*TSLGYE
Trigger: TTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACTC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGAGTTCCAAACTTTATaGACCTCCCTGGGTTACGAA +
Preference number: 3 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIEFQTL*TSLGYE
Trigger: TTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACTC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTCCTCTCAGAAACCTTaGCATTGGTGCAGACAAGAT +
Preference number: 3 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPSSQKP*HWCRQD
Trigger: ATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGGA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR TCA 72 bp CAAAGGCAGGGCTTCAACGAAATGAAATTACGAATATaGTTTCCTCTTCCCACTCCTGAGTATGGTATCACT +
Preference number: 3 (lower is better)
Translates to: QRQGFNEMKLRI*FPLPTPEYGIT
Trigger: AGTGATACCATACTCAGGAGTGGGAAGAGGAAATCATATTCGTAATTTCATTTCGTTGAAGCCCTGCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR TCA 72 bp ATGGCGACCAGTTCTCCTGAATCACAAAGTTTGGCTTaGTATACCACACCAAATGATCCATTTCCAATCACT +
Preference number: 3 (lower is better)
Translates to: MATSSPESQSLA*YTTPNDPFPIT
Trigger: AGTGATTGGAAATGGATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
3UTR-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGTCCTTCAATTCTCCTaGCTTTCCAAGGAATATTGC +
Preference number: 3 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWVLQFS*LSKEYC
Trigger: GCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGAC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp TCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAATAGATCTTGGTACATaGGAGGCTCCCACTAAAATG +
Preference number: 3 (lower is better)
Translates to: SHHWSRRNNAIGLCYSDLIDLGT*EAPTKM
Trigger: CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTAT...TAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
3UTR TCA 72 bp AGTGGTCACGCTAATTGGTATGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTTATAAATGCAAATTTT +
Preference number: 3 (lower is better)
Translates to: SGHANWYVYRPK*SIGNTFINANF
Trigger: AAAATTTGCATTTATAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR GCA 72 bp TGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTaGTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCT +
Preference number: 3 (lower is better)
Translates to: CELSLQSVNCFL*CAEAFYLDVVP
Trigger: AGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
3UTR-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGTCCTTCAATTCTCCTaGCTTTCCAAGGAATATTGC +
Preference number: 3 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGVLQFS*LSKEYC
Trigger: GCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGAC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR-3UTR CAA 90 bp GTTCCCAGGACCTGTTTGCCATCTGTATGTATCCTTTTGAATAATGTCTATTCACAGAAGCTTTTTATCTaGATGTGGTCCCTATGTGTA +
Preference number: 3 (lower is better)
Translates to: VPRTCLPSVCILLNNVYSQKLFI*MWSLCV
Trigger: TACACATAGGGACCACATCAAGATAAAAAGCTTCTG...TGAATAGACATTATTCAAAAGGATACATACAGATGGCAAACAGGTCCTGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
3UTR TCA 72 bp CATAACATGTTTACATACATCATCCAGTATTGGAAATaGGCAGACTCAAACACAACATGTGTTGGTTACCTG +
Preference number: 3 (lower is better)
Translates to: HNMFTYIIQYWK*ADSNTTCVGYL
Trigger: CAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATGTATGTAAACATGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACAGGGTGCTAGGGCCTaGAGGAGGGCTGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPQGARA*RRAANR
Trigger: TCTGTTGGCAGCCCTCCTGCAGGCCCTAGCACCCTG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPWAALT*SLSSRI
Trigger: GATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACACGAGTCTCACGCTTaGAGAGAAAGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPHESHA*RERGMG
Trigger: ACCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAGCCCTGTCAGCGGCTaGGGGGCCGGCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSPVSG*GAGSSS
Trigger: CGAGGAGGAGCCGGCCCCGCAGCCGCTGACAGGGCT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCCCGCCCCTCGGCTCTaGTCGGTGCCCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVPAPRL*SVPAQE
Trigger: TTCCTGAGCGGGCACCGAGCAGAGCCGAGGGGCGGG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATGTGTGCCTGAGTCTTaGTTGCTGCTTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPCVPES*LLLPLW
Trigger: CCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACTCGGCTCTGCTCGGTaGCCGCTCAGGAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLGSAR*PLRKCP
Trigger: CGGACACTTCCTGAGCGGGCACCGAGCAGAGCCGAG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTGCGACGGGAAACGCTaGAGCTCCGGCAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVCDGKR*SSGKPR
Trigger: CCGCGGCTTGCCGGAGCTGCAGCGTTTCCCGTCGCA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGAGGGAGGGAGGGGGTaGCTCGGAGATGCGACGGGA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAEGGRG*LGDATG
Trigger: TCCCGTCGCATCTCCGAGCCACCCCCTCCCTCCCTC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTGCGCCAGGAGCAGCTaGAGGCGGCGGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSCARSS*RRRLDP
Trigger: TGGATCCAGCCGCCGCCTGCAGCTGCTCCTGGCGCA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPAAAPA*SSPQRR
Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATCACTGGAAAGAAGGTaGAGTCTTCTGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPSLERR*SLLPCW
Trigger: CCAGCAAGGCAGAAGACTGCACCTTCTTTCCAGTGA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CAA 72 bp AGAGCCACCTGTAGAGCATGTGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAGCCTCCTGTACAAGCC +
Preference number: 4 (lower is better)
Translates to: RATCRACVPESC*LLPLWQPPVQA
Trigger: GGCTTGTACAGGAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACATGCTCTACAGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGSGPP*HDHSLR
Trigger: GCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGAAGTGTCCGCGCTTTaGCCCAGCCCAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPEVSAL*PSPEPC
Trigger: ACAGGGCTCTGGGCTGGGGCAAAGCGCGGACACTTC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPAAAPA*SSPQRR
Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACCTTCCTTTGTCACTTaGCCCGGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLPSFVT*PGRRRR
Trigger: CCGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCATTCGCCGGGGACATaGGAACCCGGCAACCGCTTC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAHSPGT*EPGNRF
Trigger: GAAGCGGTTGCCGGGTTCCCATGTCCCCGGCGAATG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPWAALT*SLSSRI
Trigger: GATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTAAAPA*SSPQRR
Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATGCCTGAGTCTTGCTTaGTGCTTCCCCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPCLSLA*CFPSGS
Trigger: GCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACCATGGGCTCAGCTCTaGAGCCCTACAGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPPWAQL*SPTVTS
Trigger: GCTGGTAACTGTAGGGCTGCAGAGCTGAGCCCATGG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTCTCCGCAAAGGAGGTaGTTCTGGGCCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASPQRR*FWAALT
Trigger: TGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATGCAATTGCCTCCGGTaGAGTTCGGGGTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPCNCLR*SSGSED
Trigger: GTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGATTTTTATGGACTCTaGGGAGTATACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPDFYGL*GVYHVQ
Trigger: CTGGACGTGGTATACTCCCCAGAGTCCATAAAAATC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACAGAAACCTTTGCATTaGTGCAGACAAGATGACTGG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPQKPLH*CRQDDW
Trigger: CCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACAGCCCCACTGTTCGTaGTGTCCATATATTTTACAG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPQPHCS*CPYILQ
Trigger: CTGTAAAATATATGGACACCACGAACAGTGGGGCTG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAAAACACAACATGTGTTaGTTACCTGGGAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPKHNMC*LPGRYS
Trigger: GCTGTACCTCCCAGGTAACCAACACATGTTGTGTTT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGAGTTCCCAGGACCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPEFPGP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGTCCTGGGAACTC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAAGTTCCAAACTTTATTaGCCTCCCTGGGTTACGAAT +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPSSKLY*PPWVTN
Trigger: ATTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAACAGAATCACTGCCCTaGACAGTAACTTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPTESLP*TVTFCS
Trigger: TGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGGGGTGGCTCGGAGATaGGACGGGAAACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQGVARR*DGKRCS
Trigger: GCTGCAGCGTTTCCCGTCGCATCTCCGAGCCACCCC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPPLLSP*CRPCLC
Trigger: GCAGAGACAAGGACGGCAGCAAGGTGACAACAGTGG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGCAGCTAGCTCAGCCTaGTCAACACCCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPAASSA*STPLPS
Trigger: AGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPVQSSV*IQTLAG
Trigger: CCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGAC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTGGATCCAGCGGCCATaGCGGTGGCGGAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIWIQRP*RWRRQL
Trigger: GAGCTGCCTCCGCCACCGCCATGGCCGCTGGATCCA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTGCAATTGCCTCCGGTaGAGTTCGGGGTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNACNCLR*SSGSED
Trigger: GTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCACGAGTCTCACGCTTaGAGAGAAAGGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPHESHA*RERGMG
Trigger: ACCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGATACATATACAACTTaGCATAAATCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPDTYTT*HKSQGA
Trigger: CGCTCCCTGTGATTTATGTCAAGTTGTATATGTATC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HRERLFGSTIVSGNSVYCKAEGC*TGLQLS
Trigger: GGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTT...ACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCTGAGTCTTGCTTGCTaGTTCCCCTCTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTLSLAC*FPSGSL
Trigger: GAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACAGGGTGCTAGGGCCTaGAGGAGGGCTGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLQGARA*RRAANR
Trigger: TCTGTTGGCAGCCCTCCTGCAGGCCCTAGCACCCTG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATTTCTAAGCAGTGTCTaGAAAGCTTCCTCTACATCA +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPFLSSV*KASSTS
Trigger: TGATGTAGAGGAAGCTTTGCAGACACTGCTTAGAAA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTCTCCGCAAAGGAGGTaGTTCTGGGCCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: NHRERLFGSTIVSGNSVYSPQRR*FWAALT
Trigger: TGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA...GTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCATGTGTTGGTTACCTaGGAGGTACAGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPHVLVT*EVQPHC
Trigger: ACAGTGGGGCTGTACCTCCCAGGTAACCAACACATG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGCAAAATAGTAGGGTaGAGGAAGAGGGTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGKIVG*RKRVGY
Trigger: GTACCCAACCCTCTTCCTTCACCCTACTATTTTGCC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTGGTGGTTTTTCCTGTaGAGCTGGCTGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSWWFFL*SWLLGT
Trigger: AGTCCCGAGCAGCCAGCTGCACAGGAAAAACCACCA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPSFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCTAGGGCTCCCTGGTaGTACACTAAGTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSRAPW*YTKSLN
Trigger: ATTCAGGGACTTAGTGTAGCACCAGGGAGCCCTAGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATCTCCGCAAAGGAGGTaGTTCTGGGCCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSPQRR*FWAALT
Trigger: TGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTCTCCGCAAAGGAGGTaGTTCTGGGCCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSPQRR*FWAALT
Trigger: TGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGTTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSTIVSGNSVYCFRNIVQFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...CTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp GCAGAGGTTGGAAGAGTAGTAAAGGGAGCAACGCTGCATAGTGACAGAGGCTTAATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AEVGRVVKGATLHSDRGLIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...TAAGCCTCTGTCACTATGCAGCGTTGCTCCCTTTACTACTCTTCCAACCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLFRWS*KLMQKQ
Trigger: CTGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAGCTCTAGGGCTCCCTaGTGCTACACTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSSRAP*CYTKSL
Trigger: CAGGGACTTAGTGTAGCACCAGGGAGCCCTAGAGCT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGAGAGAGAGAGAGCATaGAAGGCTCCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAERERA*KAPRIC
Trigger: GCAGATTCTGGGAGCCTTCCATGCTCTCTCTCTCTC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCAAAGGTTTCCAAGGTaGAAGCTGCACCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAQRFPR*KLHLLG
Trigger: CCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCATGTGTTGGTTACCTaGGAGGTACAGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPHVLVT*EVQPHC
Trigger: ACAGTGGGGCTGTACCTCCCAGGTAACCAACACATG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGCGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: WRPVLLNHKVWLDIPHQMGSGPP*HDHSLR
Trigger: GCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACC...CATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIGSGPP*HDHSLR
Trigger: GCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCCAGTATTAGCATCTaGCGCTGCTGTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSSISI*RCCGIC
Trigger: ACAAATGCCACAGCAGCGTCAGATGCTAATACTGGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGGTGAGATGTATCCCTaGCCTGTCCCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLGEMYP*PVPFLW
Trigger: CCAGAGGAAGGGGACAGGTCAGGGATACATCTCACC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCAGCTAAACAGCGAGTaGAAACCAAGATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPQLNSE*KPRWLT
Trigger: TGTGAGCCATCTTGGTTTTCACTCGCTGTTTAGCTG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp CTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCATGCAGCCTCTGCTGGTaGTACACAGGCAACCAGGGT +
Preference number: 4 (lower is better)
Translates to: LDYSVWQLCILFPEHSPACSLCW*YTGNQG
Trigger: ACCCTGGTTGCCTGTGTATCACCAGCAGAGGCTGCA...TGCTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR GCA 90 bp AACAAGAGGTTCTGCGGTTTAATATCCCGATGGCAGATTCCAAAGGAATGGATAGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKRFCGLISRWQIPKEWIAAAPA*SSPQRR
Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGC...TATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCGCAGAACCTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTTCCAAGGTGGAAGCTaGACCTCTTGGGGCTACACA +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSFQGGS*TSWGYT
Trigger: TGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGCTGCAGGCGGCGGCTaGATCCAGCGGCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLAAGGG*IQRPWR
Trigger: CCGCCATGGCCGCTGGATCCAGCCGCCGCCTGCAGC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NHRERLFGSTIVSGNSVYIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...GTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AAAAGGGAGGCAAGATCGTGGTCTGTTGGCCAGGTTGTAGTAAAAGTTACAACCTGCAATTGCCTCCGGTaGAGTTCGGGGTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KREARSWSVGQVVVKVTTCNCLR*SSGSED
Trigger: GTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCA...GGTTGTAACTTTTACTACAACCTGGCCAACAGACCACGATCTTGCCTCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678064.1
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLFRWS*KLMQKQ
Trigger: CTGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACCTGTCCCCTTCCTCTaGGCTCATCAGCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLPVPFL*AHQPLT
Trigger: GGTCAAAGGCTGATGAGCCCAGAGGAAGGGGACAGG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCATCCAAACGCTTGCTaGGCAGTTGGATCTGAATGC +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPHPNAC*AVGSEC
Trigger: GCATTCAGATCCAACTGCCCAGCAAGCGTTTGGATG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGAGAGAGAGAGAGCATaGAAGGCTCCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTERERA*KAPRIC
Trigger: GCAGATTCTGGGAGCCTTCCATGCTCTCTCTCTCTC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: SVWLDYSVWQLCILFPEHWAALT*SLSSRI
Trigger: GATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCA...ATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR TCA 90 bp AACAAGAGGTTCTGCGGTTTAATATCCCGATGGCAGATTCCAAAGGAATGGATAGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: NKRFCGLISRWQIPKEWIGSGPP*HDHSLR
Trigger: GCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACC...TATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCGCAGAACCTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR TCA 90 bp GAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGCCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ERLFGSTIVSGNSVYCFRPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...CCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGGGCTCATCAGCCTTTaGCCTCAGCAGCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIGLISL*PQQLAQ
Trigger: CTGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCAGCTAAACAGCGAGTaGAAACCAAGATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAQLNSE*KPRWLT
Trigger: TGTGAGCCATCTTGGTTTTCACTCGCTGTTTAGCTG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATTGGTGCAGACAAGATaGCTGGTTAGGCATACATTG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLVQTR*LVRHTL
Trigger: CAATGTATGCCTAACCAGTCATCTTGTCTGCACCAA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACAGAGGTGGATTACTTaGCAGTTCTTAGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPQRWIT*QFLVQG
Trigger: TCCTTGGACTAAGAACTGTCAAGTAATCCACCTCTG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676910.1
CDS-3UTR GCA 90 bp TCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHHWSRRNNAIGLCYSDLAAAPA*SSPQRR
Trigger: CCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGC...TAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR GCA 90 bp TCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCACACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: STIVSGNSVYCFRNIVQHTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...GTGCTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTCTCCTCGGACCAGCTaGTTTGCACTTCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSPRTS*FALPKS
Trigger: TGACTTTGGAAGTGCAAAGCAGCTGGTCCGAGGAGA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAACACATTTCTTTGTCTaGCACACCTGCCACCAACAT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPTHFFV*HTCHQH
Trigger: ATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCTGAGTCTTGCTTGCTaGTTCCCCTCTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDILSLAC*FPSGSL
Trigger: GAGGCTGCCAGAGGGGAAGCAGCAAGCAAGACTCAG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLVQSSV*IQTLAG
Trigger: CCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGAC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTGCAGTCTTCTGCCTTaGTGGAATGAACACACGATG +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNACSLLP*WNEHTM
Trigger: CATCGTGTGTTCATTCCAGCAAGGCAGAAGACTGCA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTGCAGTCTTCTGCCTTaGTGGAATGAACACACGATG +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVCSLLP*WNEHTM
Trigger: CATCGTGTGTTCATTCCAGCAAGGCAGAAGACTGCA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGAAGGTGCAGTCTTCTaGCTTGCTGGAATGAACACA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAEGAVF*LAGMNT
Trigger: TGTGTTCATTCCAGCAAGGCAGAAGACTGCACCTTC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACCTCTCAGAAACCTTTaGATTGGTGCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPPLRNL*IGADKM
Trigger: CATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTCTCCGCAAAGGAGGTaGTTCTGGGCCGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLASPQRR*FWAALT
Trigger: TGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp TTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCTTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FGSTIVSGNSVYCFRNIVFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...GACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp TGGCGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGTTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: WRPVLLNHKVWLDIPHQMFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...CATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCCAAAGATCAACTCTaGTGCCCTATAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSKDQL*CPIVPR
Trigger: TCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSLFRWS*KLMQKQ
Trigger: CTGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGCAGGACAACTCTCTTaGAGAGTCACACACACAGTT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPAGQLS*RVTHTV
Trigger: AACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCGTGAAACCCCTTTTGTaGCCCAAGACCTCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPVKPLL*PKTSAK
Trigger: TTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCAC...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGAGCTCTAGGGCTCCCTaGTGCTACACTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSSRAP*CYTKSL
Trigger: CAGGGACTTAGTGTAGCACCAGGGAGCCCTAGAGCT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGACAACAGTCCTCTATTaGCACGGTGGCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQTTVLY*HGGTPC
Trigger: GCACGGAGTGCCACCGTGCCAATAGAGGACTGTTGT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWGSGPP*HDHSLR
Trigger: GCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSTIVSGNSVYCFRNIVQGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...CTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR TCA 90 bp GCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAAGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASVWLDYSVWQLCILFPEGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...TTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNADLAFS*SGALDS
Trigger: AGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGCTTTCTCATGATCTGGAGCTCTCGATTCTCATATAGGCAGCTGCCCCGCTGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: SFLMIWSSRFSYRQLPRCDLAFS*SGALDS
Trigger: AGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...ACAGCGGGGCAGCTGCCTATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678013.1
ENST00000678439.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAGAGGTGGATTACTTaGCAGTTCTTGAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPQRWIT*QFLSGE
Trigger: TTCACCACTCAAGAACTGTCAAGTAATCCACCTCTG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCAGAGGTGGATTACTTaGCAGTTCTTGAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAQRWIT*QFLSGE
Trigger: TTCACCACTCAAGAACTGTCAAGTAATCCACCTCTG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTCCAGTATTAGCATCTaGCGCTGCTGTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSSISI*RCCGIC
Trigger: ACAAATGCCACAGCAGCGTCAGATGCTAATACTGGA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCCCTGGGTTACGAATaGTACACATTTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSLGYE*YTFLCL
Trigger: CAGACAAAGAAATGTGTATCATTCGTAACCCAGGGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGACTTATTCACAGTGGTaGGATGTATCCCTGACCTGT +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVTYSQW*DVSLTC
Trigger: ACAGGTCAGGGATACATCTCACCACTGTGAATAAGT...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTGGACTAAGTATGAAATaGAACCGGTCTCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAGLSMK*NRSHCY
Trigger: GTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCC...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTATGGAAATGGTGATGTaGCTACATATTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAMEMVM*LHIAAA
Trigger: TGCCGCTGCAATATGTAGTCACATCACCATTTCCAT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: VWLDYSVWQLCILFPEHSTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...ACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR GCA 90 bp TGGCGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: WRPVLLNHKVWLDIPHQMTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...CATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR GCA 90 bp ATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTAAAATGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: IWSSRFIDLGTLEAPTKMTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCACCTGCCACCAACATaGCAAAGGCAAGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPHLPPT*QRQVYK
Trigger: TTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTACACATTTCTTTGTCTaGCACACCTGCCACCAACAT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNATHFFV*HTCHQH
Trigger: ATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGCAGCTAGCTCAGCCTaGTCAACACCCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIAASSA*STPLPS
Trigger: AGATGGAAGGGGTGTTGAGCAGGCTGAGCTAGCTGC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGCAGTTGGATCTGAATaGAGGTCCATTTCTCTATCA +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPAVGSE*RSISLS
Trigger: TGATAGAGAAATGGACCTGCATTCAGATCCAACTGC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGATGTGACTACATATTaGAGCGGCAAAATAGTAGGG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPDVTTY*SGKIVG
Trigger: CCCTACTATTTTGCCGCTGCAATATGTAGTCACATC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCAGCGGCCATGGCGGTaGCGGAGGCAGCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLQRPWR*RRQLPS
Trigger: TGAAGGGAGCTGCCTCCGCCACCGCCATGGCCGCTG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CCA 90 bp TCTAGCTTTCTCATGATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGTTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SSFLMIWSSRFIDLGTLEFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...CTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGATCATGAGAAAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CCA 90 bp TGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCACAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: WLDYSVWQLCILFPEHSPQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
CDS-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNARYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTCCAAAGATCAACTCTaGTGCCCTATAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASKDQL*CPIVPR
Trigger: TCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTTCACAGTTGTCTTTCTaGGTACTGGTTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASQLSF*VLVHFS
Trigger: GCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGA...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAGTGGTCACGCTAATTaGTATGTGTACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSGHAN*YVYRPK
Trigger: CTTGGGCCTGTACACATACCAATTAGCGTGACCACT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACAAAGGTTTCCAAGGTaGAAGCTGCACCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLQRFPR*KLHLLG
Trigger: CCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAAACACAACATGTGTTaGTTACCTGGGAGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAKHNMC*LPGRYS
Trigger: GCTGTACCTCCCAGGTAACCAACACATGTTGTGTTT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AAAAGGGAGGCAAGATCGTGGTCTGTTGGCCAGGTTGTAGTAAAAGTTACAACCAGGGAGGCAAGATCGTaGTCTGTTGGCCAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: KREARSWSVGQVVVKVTTREARS*SVGQVV
Trigger: TACAACCTGGCCAACAGACCACGATCTTGCCTCCCT...GGTTGTAACTTTTACTACAACCTGGCCAACAGACCACGATCTTGCCTCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676844.1
ENST00000678064.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCTTATGGGCAGTAGGTaGCAGCAGAAAAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNALMGSR*QQKRFP
Trigger: AGGAAATCTTTTCTGCTGCCACCTACTGCCCATAAG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678439.1
3UTR CAA 72 bp ATTGACCTCCCTGGGTTACGAATGATACACATTTCTTaGTCTGCCACACCTGCCACCAACATGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: IDLPGLRMIHIS*SATPATNMPKA
Trigger: TGCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCATTCGTAACCCAGGGAGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CAA 72 bp AGTATTGGAAATGAGCAGACTCAAACACAACATGTGTaGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: SIGNEQTQTQHV*VTWEVQPHCSW
Trigger: CCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CAA 72 bp CTACCAACTGATCCACACCACTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCTCAGCCAACACACAGC +
Preference number: 4 (lower is better)
Translates to: LPTDPHHYPLEI*VVLVTAQPTHS
Trigger: GCTGTGTGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTDLAFS*SGALDS
Trigger: AGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGTGAGATGTATCCCTaGCCTGTCCCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPGEMYP*PVPFLW
Trigger: CCAGAGGAAGGGGACAGGTCAGGGATACATCTCACC...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTACTTATTCACAGTGGTaGGATGTATCCCTGACCTGT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTTYSQW*DVSLTC
Trigger: ACAGGTCAGGGATACATCTCACCACTGTGAATAAGT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCACTTATTCACAGTGGTaGGATGTATCCCTGACCTGT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSTYSQW*DVSLTC
Trigger: ACAGGTCAGGGATACATCTCACCACTGTGAATAAGT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGACGAGACCCATAAAGTaGCCTAAGGTGGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQTRPIK*PKVAMR
Trigger: CCTCATTGCCACCTTAGGTCACTTTATGGGTCTCGT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGCACACACAATGAAATaGGAGAAAAGCGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPAHTMK*EKSVTF
Trigger: AAAAGTCACGCTTTTCTCTCATTTCATTGTGTGTGC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTCTGTGATCCCACCATaGTCCTTGAGAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPSVIPP*SLRKKN
Trigger: ATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCTGTGATCCCACCATaGTCCTTGAGAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSVIPP*SLRKKN
Trigger: ATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCGGACTAAGTATGAAATaGAACCGGTCTCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSGLSMK*NRSHCY
Trigger: GTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCC...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAAAATGATATTTCATTaGGCAAGGGTAGAGATGGCG +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPKMIFH*ARVEMA
Trigger: CGCCATCTCTACCCTTGCTCAATGAAATATCATTTT...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAAAAATGATATTTCATTaGGCAAGGGTAGAGATGGCG +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPKMIFH*ARVEMA
Trigger: CGCCATCTCTACCCTTGCTCAATGAAATATCATTTT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGGCTCCTCTCCTCATTaGGCCAGGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGGSSPH*ARSSCR
Trigger: CCTGCAGCTGCTCCTGGCGCAATGAGGAGAGGAGCC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWKAEGC*TGLQLS
Trigger: GGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFKAEGC*TGLQLS
Trigger: GGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTT...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCACACATTTCTTTGTCTaGCACACCTGCCACCAACAT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSTHFFV*HTCHQH
Trigger: ATGTTGGTGGCAGGTGTGGCAGACAAAGAAATGTGT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCAGGGTGCTAGGGCCTaGAGGAGGGCTGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGQGARA*RRAANR
Trigger: TCTGTTGGCAGCCCTCCTGCAGGCCCTAGCACCCTG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLLHPNA*WAVGSE
Trigger: TTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATCTAGGGCTCCCTGGTaGTACACTAAGTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSRAPW*YTKSLN
Trigger: ATTCAGGGACTTAGTGTAGCACCAGGGAGCCCTAGA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCTCTCAGAAACCTTTaGATTGGTGCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSPLRNL*IGADKM
Trigger: CATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTTCCAAGGTGGAAGCTaGACCTCTTGGGGCTACACA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIFQGGS*TSWGYT
Trigger: TGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTTCTTGTGGCCTGTCTaGACCCTGCCCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWFLWPV*TLPRSC
Trigger: GCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGCTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQLFRWS*KLMQKQ
Trigger: CTGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACCTGTCCCCTTCCTCTaGGCTCATCAGCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIPVPFL*AHQPLT
Trigger: GGTCAAAGGCTGATGAGCCCAGAGGAAGGGGACAGG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTGTCTTTCTGGGTACTaGTTCACTTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQCLSGY*FTSAGR
Trigger: CCTGCCTGCTGAAGTGAACCAGTACCCAGAAAGACA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTCACAGTTGTCTTTCTaGGTACTGGTTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTSQLSF*VLVHFS
Trigger: GCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGATTTTTATGGACTCTaGGGAGTATACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTDFYGL*GVYHVQ
Trigger: CTGGACGTGGTATACTCCCCAGAGTCCATAAAAATC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCAGAAACCTTTGCATTaGTGCAGACAAGATGACTGG +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSQKPLH*CRQDDW
Trigger: CCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCCATTTCTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: VLLNHKVWLDIPHQMIHFWAALT*SLSSRI
Trigger: GATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCA...GAAATGGATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp CTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATACCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFGSTIVSGNSVYCFRNIPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...TATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR TCA 90 bp ATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTAAAATGCCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IWSSRFIDLGTLEAPTKMPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTTACTTGACAGTTCTTaGGTGGTGAAGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLLDSS*VVKLKS
Trigger: ACTCTTCAACTTCACCACTCAAGAACTGTCAAGTAA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCCTTAACATCGTTCACTaGTACACAAAGAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPLNIVH*YTKKTD
Trigger: GTCTGTTTTCTTTGTGTATCAGTGAACGATGTTAAG...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTACGAGACCCATAAAGTaGCCTAAGGTGGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDITRPIK*PKVAMR
Trigger: CCTCATTGCCACCTTAGGTCACTTTATGGGTCTCGT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAATATCCAGAGGTTTGTaGAACCCCTTTTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLISRGL*NPFCGP
Trigger: TGGGCCACAAAAGGGGTTTCACAAACCTCTGGATAT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTCTGTGATCCCACCATaGTCCTTGAGAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPSVIPP*SLRKKN
Trigger: ATTTTTCTTTCTCAAGGATCATGGTGGGATCACAGA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTACAGAATCACTGCCCTaGACAGTAACTTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTTESLP*TVTFCS
Trigger: TGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCAAAATGATATTTCATTaGGCAAGGGTAGAGATGGCG +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPKMIFH*ARVEMA
Trigger: CGCCATCTCTACCCTTGCTCAATGAAATATCATTTT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTACGGAGCAACAAACTTaGATAAAACGGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTTEQQT*IKRHNP
Trigger: AGGGTTATGCCGTTTTATTCAAGTTTGTTGCTCCGT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIVYRPK*SIGNTF
Trigger: AAATGTGTTGCCGATGGATCACTTGGGCCTGTACAC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACAGAGGTGGATTACTTaGCAGTTCTTGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPQRWIT*QFLIIS
Trigger: AGAAATAATCAAGAACTGTCAAGTAATCCACCTCTG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678013.1
CDS-3UTR TCA 90 bp CTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCACAACAGACCTGCAGCTaGGGGATCTTAAATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LDYSVWQLCILFPEHSPAQQTCS*GILNLL
Trigger: CAAGAGATTTAAGATCCCTCAGCTGCAGGTCTGTTG...TGCTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWPLLSP*CRPCLC
Trigger: GCAGAGACAAGGACGGCAGCAAGGTGACAACAGTGG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATGTGTGCCTGAGTCTTaGTTGCTGCTTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSICVPES*LLLPLW
Trigger: CCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGGCCTGCAGGAGGGCTaGCAACAGACTCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLGLQEG*QQTPLP
Trigger: CGGAAGTGGAGTCTGTTGGCAGCCCTCCTGCAGGCC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDILHPNA*WAVGSE
Trigger: TTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATGCAGTCTTCTGCCTTaGTGGAATGAACACACGATG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLCSLLP*WNEHTM
Trigger: CATCGTGTGTTCATTCCAGCAAGGCAGAAGACTGCA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAAACCTTTGCATTGGTaGAGACAAGATGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAKPLHW*RQDDWL
Trigger: TAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCAAACCTTTGCATTGGTaGAGACAAGATGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPKPLHW*RQDDWL
Trigger: TAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp CCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTTCTCCTCGGACCAGCTaGTTTGCATTACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PTDPHHYPLEILVVLVTASPRTS*FALPSK
Trigger: TTTGGAAGGTAATGCAAAGCAGCTGGTCCGAGGAGA...AGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676733.1
CDS-3UTR CCA 90 bp TCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SHHWSRRNNAIGLCYSDLIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...TAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR CCA 90 bp CATCTTTCTTCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLSSHHWSRRNNAIGLCYIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...GTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNALSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp TCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: STPLSPGNIGCPSNSSANRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...GTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CCA 90 bp GATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCATCCAAAGATCAACTCTaGTGCCCTATAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: DPHHYPLEILVVLVTAQPSKDQL*CPIVPR
Trigger: TCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGA...TGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CCA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAACTATGTGTAGAATGTaGCTATTTCTGCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPTMCRM*LFLQAQ
Trigger: TTGAGCTTGCAGAAATAGCCACATTCTACACATAGT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCACTCTTAACTGGGTGTaGGGGAAACATTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSTLNWV*GKHSSH
Trigger: ATGAGAAGAATGTTTCCCCCACACCCAGTTAAGAGT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCACAAAAACTCTTAACTaGGTGTGGGGGAAACATTCT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPTKTLN*VWGKHS
Trigger: AGAATGTTTCCCCCACACCCAGTTAAGAGTTTTTGT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTACAACAGTCCTCTATTaGCACGGTGGCACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPTTVLY*HGGTPC
Trigger: GCACGGAGTGCCACCGTGCCAATAGAGGACTGTTGT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAGTCTTCTGCCTTGCTaGAATGAACACACGATGTTT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSLLPC*NEHTMF
Trigger: AAACATCGTGTGTTCATTCCAGCAAGGCAGAAGACT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGAGTGGTCACGCTAATTaGTATGTGTACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSGHAN*YVYRPK
Trigger: CTTGGGCCTGTACACATACCAATTAGCGTGACCACT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGWAALT*SLSSRI
Trigger: GATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AGCTTTCTCATGATCTGGAGCTCTCGATTCTCATATAGGCAGCTGCCCCGCTGTTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: SFLMIWSSRFSYRQLPRCSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...ACAGCGGGGCAGCTGCCTATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR TCA 90 bp CGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RPVLLNHKVWLDIPHQMIGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...GATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp TCTAGCTTTCTCATGATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSFLMIWSSRFIDLGTLEGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...CTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGATCATGAGAAAGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp CGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCCCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPVLLNHKVWLDIPHQMIPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...GATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp CTCATGATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: LMIWSSRFIDLGTLEAPTRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...AGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGATCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp CACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACACACAGCATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: HYPLEILVVLVTAQPTHSIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...GCTGTGTGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR TCA 90 bp CCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACAGAGTTCCCAGGACCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: PHHYPLEILVVLVTAQPTEFPGP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGTCCTGGGAACTC...TGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677995.1
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTTACTTGACAGTTCTTaGGTGGTGAAGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTLLDSS*VVKLKS
Trigger: ACTCTTCAACTTCACCACTCAAGAACTGTCAAGTAA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTTACTTGACAGTTCTTaGGTGGTGAAGTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSLLDSS*VVKLKS
Trigger: ACTCTTCAACTTCACCACTCAAGAACTGTCAAGTAA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTCCAGTATTAGCATCTaGCGCTGCTGTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDISSISI*RCCGIC
Trigger: ACAAATGCCACAGCAGCGTCAGATGCTAATACTGGA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACCCAGGTCACTAGTTTaGAACTGTGCTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLPRSLV*NCAKIC
Trigger: GCAAATCTTAGCACAGTTTCAAACTAGTGACCTGGG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTTAACATCGTTCACTaGTACACAAAGAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPLNIVH*YTKKTD
Trigger: GTCTGTTTTCTTTGTGTATCAGTGAACGATGTTAAG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCAGCTAAACAGCGAGTaGAAACCAAGATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIQLNSE*KPRWLT
Trigger: TGTGAGCCATCTTGGTTTTCACTCGCTGTTTAGCTG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCGCACACACAATGAAATaGGAGAAAAGCGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSAHTMK*EKSVTF
Trigger: AAAAGTCACGCTTTTCTCTCATTTCATTGTGTGTGC...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTAT +
Preference number: 4 (lower is better)
Translates to: GSTIVSGNSVYCFRNIVQDLAFS*SGALDY
Trigger: ATAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...CTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676775.1
CDS-3UTR TCA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGCAGGACCTTTATGGATaGATCTCACACAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMQDLYG*ISHSGE
Trigger: CTCACCACTGTGTGAGATTCATCCATAAAGGTCCTG...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGKAEGC*TGLQLS
Trigger: GGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: STPLSPGNIGCPSNSSANKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...GTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR GCA 90 bp CACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACACACAGCAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: HYPLEILVVLVTAQPTHSKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...GCTGTGTGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTTTGTCTGCCACACCTaGCACCAACATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWFVCHT*HQHAKG
Trigger: GCCTTTGGCATGTTGGTGGCAGGTGTGGCAGACAAA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPSFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCCATGGGCTCAGCTCTaGAGCCCTACAGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGPWAQL*SPTVTS
Trigger: GCTGGTAACTGTAGGGCTGCAGAGCTGAGCCCATGG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGAAGGTGCAGTCTTCTaGCTTGCTGGAATGAACACA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIEGAVF*LAGMNT
Trigger: TGTGTTCATTCCAGCAAGGCAGAAGACTGCACCTTC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCTTTTATTGCAGAGGTaGAAAACGGAGCAACAAACT +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSLLLQR*KTEQQT
Trigger: AGTTTGTTGCTCCGTTTTGCACCTCTGCAATAAAAG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCTACTGGTTGTCATTTTaGTTTTATTGCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPYWLSF*FYCRGA
Trigger: TGCACCTCTGCAATAAAAGCAAAATGACAACCAGTA...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCCCACTGTTGTCACCTTaGTGCCGTCCTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFPLLSP*CRPCSL
Trigger: CAGTGAACAAGGACGGCAGCAAGGTGACAACAGTGG...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAGCTTTCTCATGATCTaGAGCTCTCGATTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASFLMI*SSRFLN
Trigger: ATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCCAGGGAGCGTCTGTTTaGCTCGACTATAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFQGASV*LDYSVW
Trigger: CCAGACACTATAGTCGAGCCAAACAGACGCTCCCTG...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp ACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: TDPHHYPLEILVVLVTAQRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...CTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTCCAAAGATCAACTCTaGTGCCCTATAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSKDQL*CPIVPR
Trigger: TCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGTCCAAAGATCAACTCTaGTGCCCTATAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: TDPHHYPLEILVVLVTAQSKDQL*CPIVPR
Trigger: TCTCGGTACTATAGGGCACCAGAGTTGATCTTTGGA...CTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CCA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGACTATGTGTAGAATGTaGCTATTTCTGCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVTMCRM*LFLQAQ
Trigger: TTGAGCTTGCAGAAATAGCCACATTCTACACATAGT...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACACTTCCGAACCCTCTaGAGGACGAGACCCATAAAG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIHFRTL*RTRPIK
Trigger: CTTTATGGGTCTCGTCCTCCAGAGGGTTCGGAAGTG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGAGAGAGAGAGAGCATaGAAGGCTCCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIERERA*KAPRIC
Trigger: GCAGATTCTGGGAGCCTTCCATGCTCTCTCTCTCTC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GCAGAGGTTGGAAGAGTAGTAAAGGGAGCAACGCTGCATAGTGACAGAGGCTTAAGCTTTCTCATGATCTaGAGCTCTCGATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: AEVGRVVKGATLHSDRGLSFLMI*SSRFID
Trigger: ATCTATGAATCGAGAGCTCCAGATCATGAGAAAGCT...TAAGCCTCTGTCACTATGCAGCGTTGCTCCCTTTACTACTCTTCCAACCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CCA 90 bp CACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTAGCTTTCTCATGATCTaGAGCTCTCGATTATTGTGT +
Preference number: 4 (lower is better)
Translates to: HRERLFGSTIVSGNSVYCSFLMI*SSRLLC
Trigger: ACACAATAATCGAGAGCTCCAGATCATGAGAAAGCT...ACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676775.1
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGACGGGGGCAAATACTTaGTTGAAAATGAGTACTTCG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQTGANT*LKMSTS
Trigger: CGAAGTACTCATTTTCAATCAAGTATTTGCCCCCGT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGGCGACCAGTTCTCCTaGATCACAAAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIGDQFS*ITKFGL
Trigger: CAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACCTGCAATACTTTCTTaGTGGCGACCAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIPAILS*WRPVLL
Trigger: CAGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCACGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: WLDYSVWQLCILFPEHSPRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTAAACTTCGGAACAGCTaGTACATATACAACTTGACA +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTKLRNS*YIYNLT
Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCCGAAGTTT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAAACTTCGGAACAGCTaGTACATATACAACTTGACA +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSKLRNS*YIYNLT
Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCCGAAGTTT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCATTTAAGTCCCCGTTaGGTTATACCTGCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIHLSPR*VIPAKL
Trigger: GAGCTTAGCAGGTATAACTCAACGGGGACTTAAATG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGAGTTCCAAACTTTATTaGCCTCCCTGGGTTACGAAT +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSSKLY*PPWVTN
Trigger: ATTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTATCACTAGCACTAACTaGGAGCAAAACAAAACCTTA +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTITSTN*EQNKTL
Trigger: TAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGAT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGGTGAGATGTATCCCTaGCCTGTCCCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLGEMYP*PVPFLW
Trigger: CCAGAGGAAGGGGACAGGTCAGGGATACATCTCACC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGACGAGACCCATAAAGTaGCCTAAGGTGGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWTRPIK*PKVAMR
Trigger: CCTCATTGCCACCTTAGGTCACTTTATGGGTCTCGT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTTTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTLIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATCTGCCTTGCTGGAATaGACACACGATGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSALLE*THDVSK
Trigger: TTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTT +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIVYRPK*SIGNTF
Trigger: AAATGTGTTGCCGATGGATCACTTGGGCCTGTACAC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGGCAAAATAGTAGGGTaGAGGAAGAGGGTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWGKIVG*RKRVGY
Trigger: GTACCCAACCCTCTTCCTTCACCCTACTATTTTGCC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGAAGACCCGCACTCCTaGGGTGAAATGTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGEDPHS*GEMSCS
Trigger: GGAACAGGACATTTCACCTCAGGAGTGCGGGTCTTC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCAACACCCGGTGTCTTCTaGCTCTCTCTGCTATACCAC +
Preference number: 4 (lower is better)
Translates to: WSRRNNAIGLCYSDLAFSTPGVF*LSLLYH
Trigger: GTGGTATAGCAGAGAGAGTCAGAAGACACCGGGTGT...TGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp TTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTTG +
Preference number: 4 (lower is better)
Translates to: FGSTIVSGNSVYCFRNIVDLAFS*SGALDL
Trigger: CAAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...GACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR TCA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGCCTGGGTTCCCCACTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMPGFPT*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGTGGGGAACCCAGG...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLKAEGC*TGLQLS
Trigger: GGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCTCCTCGGACCAGCTaGTTTGCACTTCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISPRTS*FALPKS
Trigger: TGACTTTGGAAGTGCAAAGCAGCTGGTCCGAGGAGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCTCCTCGGACCAGCTaGTTTGCACTTCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSPRTS*FALPKS
Trigger: TGACTTTGGAAGTGCAAAGCAGCTGGTCCGAGGAGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp ACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: TDPHHYPLEILVVLVTAQKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...CTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTCTGCATCCAAACGCTTaGTGGGCAGTTGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPLHPNA*WAVGSE
Trigger: TTCAGATCCAACTGCCCAGCAAGCGTTTGGATGCAG...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCACTGGAAAGAAGGTaGAGTCTTCTGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISLERR*SLLPCW
Trigger: CCAGCAAGGCAGAAGACTGCACCTTCTTTCCAGTGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGIADFL*PVWTLP
Trigger: GGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTAT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTAGCTTTCTCATGATCTaGAGCTCTCGATTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTSFLMI*SSRFLN
Trigger: ATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: NHRERLFGSTIVSGNSVYLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...GTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
CDS-3UTR CCA 90 bp CTTGACATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 4 (lower is better)
Translates to: LDINHRERLFGSTIVSGNLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...GTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
CDS-3UTR CCA 90 bp CCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: PTDPHHYPLEILVVLVTAGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...AGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676733.1
ENST00000677995.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTGCAATTGCCTCCGGTaGAGTTCGGGGTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLCNCLR*SSGSED
Trigger: GTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCCTGTCCCCTTCCTCTaGGCTCATCAGCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLPVPFL*AHQPLT
Trigger: GGTCAAAGGCTGATGAGCCCAGAGGAAGGGGACAGG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAAGTCTTCTGCCTTGCTaGAATGAACACACGATGTTT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLSLLPC*NEHTMF
Trigger: AAACATCGTGTGTTCATTCCAGCAAGGCAGAAGACT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAAATTCCTGGGGATCTaGCATTGGCCAAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIKFLGI*HWPNFL
Trigger: AAGGAAGTTTGGCCAATGCCAGATCCCCAGGAATTT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATAAGCTTTCTCATGATCTaGAGCTCTCGATTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: KSQGASVWLDYSVWQLCISFLMI*SSRFAN
Trigger: GTTAGCAAATCGAGAGCTCCAGATCATGAGAAAGCT...TATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CCA 90 bp AAAAGGGAGGCAAGATCGTGGTCTGTTGGCCAGGTTGTAGTAAAAGTTACAACCAAGATCGTGGTCTGTTaGCCAGGTTGTAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KREARSWSVGQVVVKVTTKIVVC*PGCSKS
Trigger: ACTTTTACTACAACCTGGCCAACAGACCACGATCTT...GGTTGTAACTTTTACTACAACCTGGCCAACAGACCACGATCTTGCCTCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676844.1
ENST00000678064.1
CDS-3UTR CCA 90 bp ATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTAAAATGTCGATTCATAGATCTTaGTACATTGGAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IWSSRFIDLGTLEAPTKMSIHRS*YIGGSH
Trigger: GTGGGAGCCTCCAATGTACCAAGATCTATGAATCGA...CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CCA 90 bp CATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTAGCTTTCTCATGATCTaGAGCTCTCGATTCTCATAT +
Preference number: 4 (lower is better)
Translates to: HKSQGASVWLDYSVWQLCSFLMI*SSRFSY
Trigger: ATATGAGAATCGAGAGCTCCAGATCATGAGAAAGCT...ACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CCA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGTTCCCAGGACCTTTATaGATGAATCTCACACAGTGG +
Preference number: 4 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMFPGPL*MNLTQW
Trigger: CCACTGTGTGAGATTCATCCATAAAGGTCCTGGGAA...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677483.1
3UTR CAA 72 bp ATCCACAGGGATAGAGAATACTCCTCTCAGAAACCTTaGCATTGGTGCAGACAAGATGACTGGTTAGGCATA +
Preference number: 4 (lower is better)
Translates to: IHRDREYSSQKP*HWCRQDDWLGI
Trigger: TATGCCTAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGGAGTATTCTCTATCCCTGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
3UTR CAA 72 bp ATGATCTGGAGCTCTCGATTCATAGATCTTGGTACATaGGAGGCTCCCACTAAAATGTTGCAGAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: MIWSSRFIDLGT*EAPTKMLQRLE
Trigger: TTCCAACCTCTGCAACATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp CGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: RLFGSTIVSGNSVYCFRNSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...GTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR TCA 90 bp CGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: RPVLLNHKVWLDIPHQMIDLAFS*SGALDS
Trigger: AGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...GATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp TTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: FGSTIVSGNSVYCFRNIVRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...GACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676775.1
ENST00000677169.1
ENST00000678350.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGATACATATACAACTTaGCATAAATCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLDTYTT*HKSQGA
Trigger: CGCTCCCTGTGATTTATGTCAAGTTGTATATGTATC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGCAGATACATATACAACTTaGCATAAATCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LDYSVWQLCILFPEHSPADTYTT*HKSQGA
Trigger: CGCTCCCTGTGATTTATGTCAAGTTGTATATGTATC...TGCTGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGATACATATACAACTTaGCATAAATCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQDTYTT*HKSQGA
Trigger: CGCTCCCTGTGATTTATGTCAAGTTGTATATGTATC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGAGTTCCCAGGACCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIEFPGP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGTCCTGGGAACTC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCCAGTATTAGCATCTaGCGCTGCTGTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSSISI*RCCGIC
Trigger: ACAAATGCCACAGCAGCGTCAGATGCTAATACTGGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAGTTCCAAACTTTATTaGCCTCCCTGGGTTACGAAT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDISSKLY*PPWVTN
Trigger: ATTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAGCACACACAATGAAATaGGAGAAAAGCGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLAHTMK*EKSVTF
Trigger: AAAAGTCACGCTTTTCTCTCATTTCATTGTGTGTGC...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTCTGCCTTGCTGGAATaGACACACGATGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDISALLE*THDVSK
Trigger: TTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGATCCAGTATTGGAAATaGGCAGACTCAAACACAACA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQIQYWK*ADSNTT
Trigger: TGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGAT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGAAATGTCCTGTTCCTaGCGAATCCTTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIEMSCS*RILSPR
Trigger: CCTTGGACTAAGGATTCGTCAGGAACAGGACATTTC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316626.6
CDS-3UTR TCA 90 bp TCTAGCTTTCTCATGATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCA +
Preference number: 4 (lower is better)
Translates to: SSFLMIWSSRFIDLGTLEDLAFS*SGALDS
Trigger: TGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...CTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGATCATGAGAAAGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR TCA 90 bp TCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACAAATCGTTGCTCCAGTaGCTACTTTTTATTGACCTA +
Preference number: 4 (lower is better)
Translates to: STPLSPGNIGCPSNSSANKSLLQ*LLFIDL
Trigger: TAGGTCAATAAAAAGTAGTCACTGGAGCAACGATTT...GTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678678.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLPLLSP*CRPCLC
Trigger: GCAGAGACAAGGACGGCAGCAAGGTGACAACAGTGG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLTLPRS*HHCCHL
Trigger: AAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTGTGTGCCTGAGTCTTaGTTGCTGCTTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLCVPES*LLLPLW
Trigger: CCAGAGGGGAAGCAGCAAGCAAGACTCAGGCACACA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTAAACTGTGCTAAGATTTaGAAAGAACTTTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLNCAKI*KELWSG
Trigger: GCCTGACCAAAGTTCTTTGCAAATCTTAGCACAGTT...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGTCCAGAGCAGTGTCTaGATCCAAACGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLVQSSV*IQTLAG
Trigger: CCCAGCAAGCGTTTGGATGCAGACACTGCTCTGGAC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGAAACCTTTGCATTGGTaGAGACAAGATGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQKPLHW*RQDDWL
Trigger: TAACCAGTCATCTTGTCTGCACCAATGCAAAGGTTT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTTTCTAAGCAGTGTCTaGAAAGCTTCCTCTACATCA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQFLSSV*KASSTS
Trigger: TGATGTAGAGGAAGCTTTGCAGACACTGCTTAGAAA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCCATTTCCTGTTGTCACCTTGCTaGCGTCCTTGTTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: VLLNHKVWLDIPHQMIHFLLSPC*RPCSLL
Trigger: TAGCAGTGAACAAGGACGGCAGCAAGGTGACAACAG...GAAATGGATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCTTTTGTCTTTATGTTaGGGTGTTAGGTTAACGATA +
Preference number: 4 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSLLSLC*GVRLTI
Trigger: TATCGTTAACCTAACACCCCAACATAAAGACAAAAG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTACTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLLDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: FGSTIVSGNSVYCFRNIVGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...GACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGCAGGACAACTCTCTTaGAGAGTCACACACACAGTT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWAGQLS*RVTHTV
Trigger: AACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAGTCTTCTGCCTTGCTaGAATGAACACACGATGTTT +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDISLLPC*NEHTMF
Trigger: AAACATCGTGTGTTCATTCCAGCAAGGCAGAAGACT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTAGTGGTCACGCTAATTaGTATGTGTACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPSGHAN*YVYRPK
Trigger: CTTGGGCCTGTACACATACCAATTAGCGTGACCACT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CAA 72 bp CAAATCCAAAGGTTTCCAAGGTGGAAGCTGCACCTCTaGGGGCTACACAATGGAATAAAATCATTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QIQRFPRWKLHL*GLHNGIKSLER
Trigger: TCTTTCCAATGATTTTATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCACCTTGGAAACCTTTGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLARTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR TCA 90 bp CAGGACCTTGATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: QDLDYFYQLIHTTIPWKYIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...ATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677995.1
ENST00000678377.1
CDS-3UTR TCA 90 bp GACCTTGATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGGAGTTCCCAGGACCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: DLDYFYQLIHTTIPWKYWEFPGP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGTCCTGGGAACTC...CCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677995.1
ENST00000678377.1
CDS-3UTR TCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLLIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGGACTAAGTATGAAATaGAACCGGTCTCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWGLSMK*NRSHCY
Trigger: GTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATTGGTGCAGACAAGATaGCTGGTTAGGCATACATTG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSILVQTR*LVRHTL
Trigger: CAATGTATGCCTAACCAGTCATCTTGTCTGCACCAA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGTGTACAGGCCCAAGTaGTCCATCGGCAACACATTT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGVYRPK*SIGNTF
Trigger: AAATGTGTTGCCGATGGATCACTTGGGCCTGTACAC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATGGAAATGGTGATGTaGCTACATATTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPMEMVM*LHIAAA
Trigger: TGCCGCTGCAATATGTAGTCACATCACCATTTCCAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AAAAGGGAGGCAAGATCGTGGTCTGTTGGCCAGGTTGTAGTAAAAGTTACAACCGAAATGTCCTGTTCCTaGCGAATCCATAAACTTTTA +
Preference number: 4 (lower is better)
Translates to: KREARSWSVGQVVVKVTTEMSCS*RIHKLL
Trigger: TAAAAGTTTATGGATTCGTCAGGAACAGGACATTTC...GGTTGTAACTTTTACTACAACCTGGCCAACAGACCACGATCTTGCCTCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676844.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCACCTGCCACCAACATaGCAAAGGCAAGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWHLPPT*QRQVYK
Trigger: TTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCCTCTCAGAAACCTTTaGATTGGTGCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWPLRNL*IGADKM
Trigger: CATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTGACATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACCTTTTGTCTTTATGTTaGGGTGTTAGGTTAACGATA +
Preference number: 4 (lower is better)
Translates to: LDINHRERLFGSTIVSGNLLSLC*GVRLTI
Trigger: TATCGTTAACCTAACACCCCAACATAAAGACAAAAG...GTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDILSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: DYFYQLIHTTIPWKYWLSGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...GGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678377.1
CDS-3UTR CCA 90 bp CTTGATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGAGATATACGAAACATTaGGTTCTCCTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: LDYFYQLIHTTIPWKYWLRYTKH*VLLGPA
Trigger: AGCTGGTCCGAGGAGAACCCAATGTTTCGTATATCT...CAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CCA 90 bp GATGTTAAGTTCATTTACTGTATCTCTTTCAGTACCAAATCTGAGGCCCTAAAGCTGTTCAGGTGGAGTTaGAAGCTGATGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DVKFIYCISFSTKSEALKLFRWS*KLMQKQ
Trigger: CTGCTTCTGCATCAGCTTCCAACTCCACCTGAACAG...CTTTAGGGCCTCAGATTTGGTACTGAAAGAGATACAGTAAATGAACTTAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679068.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCACTTCCGAACCCTCTaGAGGACGAGACCCATAAAG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLHFRTL*RTRPIK
Trigger: CTTTATGGGTCTCGTCCTCCAGAGGGTTCGGAAGTG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACAGCCCCACTGTTCGTaGTGTCCATATATTTTACAG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIQPHCS*CPYILQ
Trigger: CTGTAAAATATATGGACACCACGAACAGTGGGGCTG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGACGGGGGCAAATACTTaGTTGAAAATGAGTACTTCG +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWTGANT*LKMSTS
Trigger: CGAAGTACTCATTTTCAATCAAGTATTTGCCCCCGT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR TCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAAACTTCGGAACAGCTaGTACATATACAACTTGACA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIKLRNS*YIYNLT
Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCCGAAGTTT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp TTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLPTDPHHYPLEILVVLIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...TAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678377.1
ENST00000678678.1
CDS-3UTR TCA 90 bp CTTGTTGGAGTTCCCAGGACCTGTTTGCCATCTGTATGTATCCTTTTGAATAATATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: LVGVPRTCLPSVCILLNNIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...ATTATTCAAAAGGATACATACAGATGGCAAACAGGTCCTGGGAACTCCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR TCA 90 bp TCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCAGATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: SHFVNCLFSLLTVSFAVQIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...CTGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGAGTTCCCAGGACCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPEFPGP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGTCCTGGGAACTC...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCCCTGGGTTACGAATaGTACACATTTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISLGYE*YTFLCL
Trigger: CAGACAAAGAAATGTGTATCATTCGTAACCCAGGGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCTGGGCAGTTGGATCTaGATGCAGGTCCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLLGSWI*MQVHFS
Trigger: AGAGAAATGGACCTGCATTCAGATCCAACTGCCCAG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAACAGAATCACTGCCCTaGACAGTAACTTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSITESLP*TVTFCS
Trigger: TGAGCAAAAAGTTACTGTTCAGGGCAGTGATTCTGT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGACGGAGCAACAAACTTaGATAAAACGGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWTEQQT*IKRHNP
Trigger: AGGGTTATGCCGTTTTATTCAAGTTTGTTGCTCCGT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTCACTGGAAAGAAGGTaGAGTCTTCTGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLSLERR*SLLPCW
Trigger: CCAGCAAGGCAGAAGACTGCACCTTCTTTCCAGTGA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTTACTGGTTGTCATTTTaGTTTTATTGCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIYWLSF*FYCRGA
Trigger: TGCACCTCTGCAATAAAAGCAAAATGACAACCAGTA...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGATGTGACTACATATTaGAGCGGCAAAATAGTAGGG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIDVTTY*SGKIVG
Trigger: CCCTACTATTTTGCCGCTGCAATATGTAGTCACATC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp CTTGTTGGAGTTCCCAGGACCTGTTTGCCATCTGTATGTATCCTTTTGAATAATTTCCCAGGACCTGTTTaGCATCTGTATGTATCCTTT +
Preference number: 4 (lower is better)
Translates to: LVGVPRTCLPSVCILLNNFPGPV*HLYVSF
Trigger: AAAGGATACATACAGATGGCAAACAGGTCCTGGGAA...ATTATTCAAAAGGATACATACAGATGGCAAACAGGTCCTGGGAACTCCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR GCA 90 bp TTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCTCAGGCAGCAATATTTaGTGTTCTGCAGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: FGSTIVSGNSVYCFRNIVSGSNI*CSAVFV
Trigger: AACAAATACTGCAGAACAGCAAATATTGCTGCCTGA...GACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CCA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGCTTTTGTCTTTATGTTaGGGTGTTAGGTTAACGATA +
Preference number: 4 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQLLSLC*GVRLTI
Trigger: TATCGTTAACCTAACACCCCAACATAAAGACAAAAG...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GATGGCAGATTCCAAAGGAATGGATATAGGCTAAACTTCGGAACAGCTGATACACTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: DGRFQRNGYRLNFGTADTLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...TGTATCAGCTGTTCCGAAGTTTAGCCTATATCCATTCCTTTGGAATCTGCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTCTCGACTATAGTGTCTaGCAACTCTGTATACTGTTT +
Preference number: 4 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLALDYSV*QLCILF
Trigger: AAACAGTATACAGAGTTGCCAGACACTATAGTCGAG...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGGGTTTAATATCCCGATaGCAGATTCCAAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWGLISR*QIPKEW
Trigger: CCATTCCTTTGGAATCTGCCATCGGGATATTAAACC...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAACTCTTAACTGGGTGTaGGGGAAACATTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSITLNWV*GKHSSH
Trigger: ATGAGAAGAATGTTTCCCCCACACCCAGTTAAGAGT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATGGCCAAACTTCCTTTaGAAGATTCCAAAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLWPNFL*KIPKLN
Trigger: ATTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp TCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAAAATGTTGCAGAGGTTaGAAGAGTAGTAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SHHWSRRNNAIGLCYSDLKCCRG*KSSKGS
Trigger: GCTCCCTTTACTACTCTTCCAACCTCTGCAACATTT...TAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CCA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGTGCATTTATTTCACCTaGGTTCCCCACTTGATTATT +
Preference number: 4 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMCIYFT*VPHLII
Trigger: AATAATCAAGTGGGGAACCCAGGTGAAATAAATGCA...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGAAAATATGTATCACGTaGAACGGGGGCAAATACTTG +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWKICIT*NGGKYL
Trigger: CAAGTATTTGCCCCCGTTTCACGTGATACATATTTT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR TCA 90 bp CGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: RPVLLNHKVWLDIPHQMISQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...GATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLASQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGDLAFS*SGALDS
Trigger: AGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGATCCATTTCCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: VLLNHKVWLDIPHQMIHFRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...GAAATGGATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR TCA 90 bp AACAAGAGGTTCTGCGGTTTAATATCCCGATGGCAGATTCCAAAGGAATGGATAAAACTTCGGAACAGCTaGTACATATACAACTTGACA +
Preference number: 4 (lower is better)
Translates to: NKRFCGLISRWQIPKEWIKLRNS*YIYNLT
Trigger: TGTCAAGTTGTATATGTATCAGCTGTTCCGAAGTTT...TATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCGCAGAACCTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR TCA 90 bp AGTGGTGAGCTTTTACTCAACAATGAATGCACACAACATGACTGCCTTAAAGTTATTATTTCTACCAACTaGTCCACACCACTATCCCCT +
Preference number: 4 (lower is better)
Translates to: SGELLLNNECTQHDCLKVIISTN*STPLSP
Trigger: AGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAAT...AACTTTAAGGCAGTCATGTTGTGTGCATTCATTGTTGAGTAAAAGCTCACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCCCAGGTCACTAGTTTaGAACTGTGCTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGPRSLV*NCAKIC
Trigger: GCAAATCTTAGCACAGTTTCAAACTAGTGACCTGGG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATCCAGTATTGGAAATaGGCAGACTCAAACACAACA +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPIQYWK*ADSNTT
Trigger: TGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCACCTGCCACCAACATaGCAAAGGCAAGTCTATAAA +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGHLPPT*QRQVYK
Trigger: TTTATAGACTTGCCTTTGGCATGTTGGTGGCAGGTG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGAACTGTGCTAAGATTTaGAAAGAACTTTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWNCAKI*KELWSG
Trigger: GCCTGACCAAAGTTCTTTGCAAATCTTAGCACAGTT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTCTTTTATTGCAGAGGTaGAAAACGGAGCAACAAACT +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPLLLQR*KTEQQT
Trigger: AGTTTGTTGCTCCGTTTTGCACCTCTGCAATAAAAG...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACTTTTATTGCAGAGGTaGAAAACGGAGCAACAAACT +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSILLLQR*KTEQQT
Trigger: AGTTTGTTGCTCCGTTTTGCACCTCTGCAATAAAAG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGAGACTGGAAATCGTTaGTCCAGTGACTACTTTTTA +
Preference number: 4 (lower is better)
Translates to: LFLPTDPHHYPLEILVVLETGNR*SSDYFL
Trigger: TAAAAAGTAGTCACTGGAGCAACGATTTCCAGTCTC...TAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678678.1
CDS-3UTR GCA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGGTTTTGCTGTTGATTTaGATTTATTTCACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMVLLLI*IYFTWV
Trigger: AACCCAGGTGAAATAAATGCAAATCAACAGCAAAAC...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR GCA 90 bp CACACAGTGGTGAGCTTTTACTCAACAATGAATGCACACAACATGACTGCCTTATTACTCAACAATGAATaGACACAACATGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HTVVSFYSTMNAHNMTALLLNNE*TQHDCL
Trigger: AAGGCAGTCATGTTGTGTGCATTCATTGTTGAGTAA...TAAGGCAGTCATGTTGTGTGCATTCATTGTTGAGTAAAAGCTCACCACTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR CCA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTCTTTTGTCTTTATGTTaGGGTGTTAGGTTAACGATA +
Preference number: 4 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDILLSLC*GVRLTI
Trigger: TATCGTTAACCTAACACCCCAACATAAAGACAAAAG...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTAGCTTTCTCATGATCTaGAGCTCTCGATTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLASFLMI*SSRFLN
Trigger: ATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCT...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTCACAGTTGTCTTTCTaGGTACTGGTTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGSQLSF*VLVHFS
Trigger: GCTGAAGTGAACCAGTACCCAGAAAGACAACTGTGA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGTGAAACCCCTTTTGTaGCCCAAGACCTCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLVKPLL*PKTSAK
Trigger: TTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCAC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCAAATTCCTGGGGATCTaGCATTGGCCAAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGKFLGI*HWPNFL
Trigger: AAGGAAGTTTGGCCAATGCCAGATCCCCAGGAATTT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCACAAAGTTTGGCTTaGTATACCACACCAAATGAT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSQSLA*YTTPND
Trigger: ATCATTTGGTGTGGTATATCAAGCCAAACTTTGTGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCCGGACTATGTTACAGTaGTCTAGCTTTCTCATGATC +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGRTMLQ*SSFLMI
Trigger: GATCATGAGAAAGCTAGATCACTGTAACATAGTCCG...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCAGAGGTGGATTACTTaGCAGTTCTTGAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLQRWIT*QFLSGE
Trigger: TTCACCACTCAAGAACTGTCAAGTAATCCACCTCTG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGATCACTAGCACTAACTaGGAGCAAAACAAAACCTTA +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWITSTN*EQNKTL
Trigger: TAAGGTTTTGTTTTGCTCTCAGTTAGTGCTAGTGAT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGCTTAACATCGTTCACTaGTACACAAAGAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWLNIVH*YTKKTD
Trigger: GTCTGTTTTCTTTGTGTATCAGTGAACGATGTTAAG...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTATGAAATTACGAATATaGTTTCCTCTTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPMKLRI*FPLPTP
Trigger: AGGAGTGGGAAGAGGAAATCATATTCGTAATTTCAT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR TCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGATGAAATTACGAATATaGTTTCCTCTTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWMKLRI*FPLPTP
Trigger: AGGAGTGGGAAGAGGAAATCATATTCGTAATTTCAT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp GTTTCCTTTGCTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCTATGTGTAGTTATGCCAATTACCCCTTaGTTATTTCTACCAACTGAT +
Preference number: 4 (lower is better)
Translates to: VSFAVQKLFILMWSLCVVMPITP*LFLPTD
Trigger: ATCAGTTGGTAGAAATAATCAAGGGGTAATTGGCAT...AACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677069.1
CDS-3UTR TCA 90 bp CTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCATTTTCTCCCATTTTGTaGATTGTCTCTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPFCELSLQSVNCFLCCAFSPIL*IVSSVC
Trigger: ACAGACTGAAGAGACAATTCACAAAATGGGAGAAAA...TGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCCTTCAATTCTCCTTaGTTTCCAAGGAATATTGCT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSFNSP*FPRNIA
Trigger: AGCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTACTGGTTGTCATTTTaGTTTTATTGCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWYWLSF*FYCRGA
Trigger: TGCACCTCTGCAATAAAAGCAAAATGACAACCAGTA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TTTCTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTTTCCCAGGACCTGTTTaGCATCTGTATGTATCCTTT +
Preference number: 4 (lower is better)
Translates to: FLPFCELSLQSVNCFLCCFPGPV*HLYVSF
Trigger: AAAGGATACATACAGATGGCAAACAGGTCCTGGGAA...ACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAAGCTTTCTCATGATCTaGAGCTCTCGATTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISFLMI*SSRFLN
Trigger: ATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATCTTTCTTCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACACTTTCTTCTCACCACTaGAGTAGAAGAAATAACGCA +
Preference number: 4 (lower is better)
Translates to: IFLLTTGVEEITQSDYVTLSSHH*SRRNNA
Trigger: TGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAG...TGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCAGAAACCTTTGCATTaGTGCAGACAAGATGACTGG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLQKPLH*CRQDDW
Trigger: CCAGTCATCTTGTCTGCACCAATGCAAAGGTTTCTG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTCTTGGGGCTACACAATaGAATAAAATCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPLGATQ*NKIIGK
Trigger: CTTTCCAATGATTTTATTCCATTGTGTAGCCCCAAG...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACTTGGGGCTACACAATaGAATAAAATCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSILGATQ*NKIIGK
Trigger: CTTTCCAATGATTTTATTCCATTGTGTAGCCCCAAG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
3UTR CAA 72 bp TTAACTGTTTCCTTTGCTGTGCAGAAGCTTTTTATCTaGATGTGGTCCCTATGTGTAGTTTCTTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: LTVSFAVQKLFI*MWSLCVVSCMP
Trigger: TGGCATACAAGAAACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAACAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGGATCTCCCTCAAAGTaGGAATACAATGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGGSPSK*EYNEIG
Trigger: ACCAATTTCATTGTATTCTCACTTTGAGGGAGATCC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTCCCTGGGTTACGAATaGTACACATTTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLSLGYE*YTFLCL
Trigger: CAGACAAAGAAATGTGTATCATTCGTAACCCAGGGA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCACGGAGCAACAAACTTaGATAAAACGGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLTEQQT*IKRHNP
Trigger: AGGGTTATGCCGTTTTATTCAAGTTTGTTGCTCCGT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp TTCTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGTTTTCTCCCATTTTGTaGATTGTCTCTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSHFVNCLFSLLTVSFAVFSPIL*IVSSVC
Trigger: ACAGACTGAAGAGACAATTCACAAAATGGGAGAAAA...CACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR GCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCAAAGATCAACTCTGGTaGCCTATAGTACCGAGAACA +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLKDQLW*PIVPRT
Trigger: TGTTCTCGGTACTATAGGGCACCAGAGTTGATCTTT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCTCTATCACAGACCTaGCTTTTCAGATTCTTTATA +
Preference number: 4 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISLSQT*LFRFFI
Trigger: TATAAAGAATCTGAAAAGGCAGGTCTGTGATAGAGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTTCTCTATCACAGACCTaGCTTTTCAGATTCTTTATA +
Preference number: 4 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPSLSQT*LFRFFI
Trigger: TATAAAGAATCTGAAAAGGCAGGTCTGTGATAGAGA...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR GCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCTCTATCACAGACCTaGCTTTTCAGATTCTTTATA +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSLSQT*LFRFFI
Trigger: TATAAAGAATCTGAAAAGGCAGGTCTGTGATAGAGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR GCA 90 bp TCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCAGGTTAACTGTTTCCTTTaGTGTGCAGAAGCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: SHFVNCLFSLLTVSFAVQVNCFL*CAEAFY
Trigger: ATAAAAAGCTTCTGCACAGCAAAGGAAACAGTTAAC...CTGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR GCA 90 bp GTTTCCTTTGCTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCTATGTGTAGTTGTTAACTGTTTCCTTTaGTGTGCAGAAGCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: VSFAVQKLFILMWSLCVVVNCFL*CAEAFY
Trigger: ATAAAAAGCTTCTGCACAGCAAAGGAAACAGTTAAC...AACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR GCA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCCAATATTTGCTGTTCTaGAGTATTTGTTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFQYLLF*SICCSA
Trigger: TGCAGAACAACAAATACTGCAGAACAGCAAATATTG...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR GCA 90 bp AGTGGTGAGCTTTTACTCAACAATGAATGCACACAACATGACTGCCTTAAAGTTTGCACACAACATGACTaGCTTAAAGTTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: SGELLLNNECTQHDCLKVCTQHD*LKVQNQ
Trigger: CTGATTTTGAACTTTAAGGCAGTCATGTTGTGTGCA...AACTTTAAGGCAGTCATGTTGTGTGCATTCATTGTTGAGTAAAAGCTCACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCACTCTTAACTGGGTGTaGGGGAAACATTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLTLNWV*GKHSSH
Trigger: ATGAGAAGAATGTTTCCCCCACACCCAGTTAAGAGT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTGGCCAAACTTCCTTTaGAAGATTCCAAAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWWPNFL*KIPKLN
Trigger: ATTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTGTTGGAGTTCCCAGGACCTGTTTGCCATCTGTATGTATCCTTTTGAATAATCTTTTTATCTTGATGTaGTCCCTATGTGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVGVPRTCLPSVCILLNNLFILM*SLCVVS
Trigger: AGAAACTACACATAGGGACCACATCAAGATAAAAAG...ATTATTCAAAAGGATACATACAGATGGCAAACAGGTCCTGGGAACTCCAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTTGATTTGGTTTGACTaGGCATGTTTCCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGLIWFD*ACFLSH
Trigger: ATGAGAAAGGAAACATGCTCAGTCAAACCAAATCAA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCATGAAATTACGAATATaGTTTCCTCTTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGMKLRI*FPLPTP
Trigger: AGGAGTGGGAAGAGGAAATCATATTCGTAATTTCAT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR TCA 90 bp ATTTACTGTATCTCTTTCAGTACCAAATCTGAGGCCCTAAAGGAGAAATATTTCTTTCAGTACCAAATCTaGGGCCCTAAAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: IYCISFSTKSEALKEKYFFQYQI*GPKGEI
Trigger: TATTTCTCCTTTAGGGCCTCAGATTTGGTACTGAAA...GAAATATTTCTCCTTTAGGGCCTCAGATTTGGTACTGAAAGAGATACAGTAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679068.1
CDS-3UTR CCA 90 bp TGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCACTTTTGTCTTTATGTTaGGGTGTTAGGTTAACGATA +
Preference number: 4 (lower is better)
Translates to: WSRRNNAIGLCYSDLAFSLLSLC*GVRLTI
Trigger: TATCGTTAACCTAACACCCCAACATAAAGACAAAAG...TGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCATTTGCAAAGAACTTTaGTCAGGCAAACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLICKEL*SGKQRA
Trigger: GGCTCTTTGTTTGCCTGACCAAAGTTCTTTGCAAAT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACTATGTGTAGAATGTaGCTATTTCTGCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTMCRM*LFLQAQ
Trigger: TTGAGCTTGCAGAAATAGCCACATTCTACACATAGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CCA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCCTCTTTTATTTTCAGTaGCTCAGGTTTCTACCAGAA +
Preference number: 4 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLLFYFQ*LRFLPE
Trigger: TTCTGGTAGAAACCTGAGCCACTGAAAATAAAAGAG...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS TCA 90 bp GACGGGAAACGCTGCAGCTCCGGCAAGCCGCGGGATCCGGCGGGCTaGCGGCAGGGGCCCGGCGAACTAGAGGGCGGCGGAGTCGCGAGT +
Preference number: 5 (lower is better)
Translates to: DGKRCSSGKPRDPAG*RQGPGELEGGGVAS
Trigger: ACTCGCGACTCCGCCGCCCTCTAGTTCGCCGGGCCCCTGCCGTCAGCCCGCCGGATCCCGCGGCTTGCCGGAGCTGCAGCGTTTCCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS GCA 90 bp CGCGGCAACAGCTCGGCCGCCCTCCCGCCCCTCGGCTCTGCTCGGTaGCCGCTCAGGAAGTGTCCGCGCTTTGCCCCAGCCCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: RGNSSAALPPLGSAR*PLRKCPRFAPAQSP
Trigger: AGGGCTCTGGGCTGGGGCAAAGCGCGGACACTTCCTGAGCGGGCACCGAGCAGAGCCGAGGGGCGGGAGGGCGGCCGAGCTGTTGCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS GCA 90 bp GGTGGCGGTGGCGGCGGCTCCTCTCCTCATTGCGCCAGGAGCAGCTaGAGGCGGCGGCTGGATCCAGCGGCCATGGCGGTGGCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GGGGGGSSPHCARSS*RRRLDPAAMAVAEA
Trigger: TGCCTCCGCCACCGCCATGGCCGCTGGATCCAGCCGCCGCCTGCAGCTGCTCCTGGCGCAATGAGGAGAGGAGCCGCCGCCACCGCCACC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS CCA 90 bp GCTGCGGGGCCGGCTCCTCCTCGCTTCCTTCCTTCCTTTGTCACTTaGCCCGGGCGGCGGCGGCGGCGGCGGCGGCACAAGCCCGCATTC +
Preference number: 5 (lower is better)
Translates to: AAGPAPPRFLPSFVT*PGRRRRRRRHKPAF
Trigger: GAATGCGGGCTTGTGCCGCCGCCGCCGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGGAAGGAAGCGAGGAGGAGCCGGCCCCGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS CCA 90 bp CCAGGAGCAGCTGCAGGCGGCGGCTGGATCCAGCGGCCATGGCGGTaGCGGAGGCAGCTCCCTTCAGACCCCAGGCAGCGGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: PGAAAGGGWIQRPWR*RRQLPSDPRQRLLD
Trigger: GTCGAGGAGCCGCTGCCTGGGGTCTGAAGGGAGCTGCCTCCGCCACCGCCATGGCCGCTGGATCCAGCCGCCGCCTGCAGCTGCTCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS CCA 90 bp AGAGAAAGGGGGATGGGTAGGAGGGAGGGAGAGGGAGGGAGGGGGTaGCTCGGAGATGCGACGGGAAACGCTGCAGCTCCGGCAAGCCGC +
Preference number: 5 (lower is better)
Translates to: RERGMGRREGEGGRG*LGDATGNAAAPASR
Trigger: GCGGCTTGCCGGAGCTGCAGCGTTTCCCGTCGCATCTCCGAGCCACCCCCTCCCTCCCTCTCCCTCCCTCCTACCCATCCCCCTTTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS GCA 90 bp AGGAAGTGTCCGCGCTTTGCCCCAGCCCAGAGCCCTGTCAGCGGCTaGGGGGCCGGCTCCTCCTCGCTTCCTTCCTTCCTTTGTCACTTG +
Preference number: 5 (lower is better)
Translates to: RKCPRFAPAQSPVSG*GAGSSSLPSFLCHL
Trigger: CAAGTGACAAAGGAAGGAAGGAAGCGAGGAGGAGCCGGCCCCGCAGCCGCTGACAGGGCTCTGGGCTGGGGCAAAGCGCGGACACTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS CCA 90 bp AGCGGCGGAAGGATCACGAGTCTCACGCTTGAAGAGAAAGGGGGATaGGTAGGAGGGAGGGAGAGGGAGGGAGGGGGTGGCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: SGGRITSLTLEEKGG*VGGREREGGGGSEM
Trigger: CATCTCCGAGCCACCCCCTCCCTCCCTCTCCCTCCCTCCTACCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTGATCCTTCCGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPVPESC*LLPLWQ
Trigger: CTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCAC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS GCA 90 bp GGCCCTGTCTTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GPVLLTFMLPKAEGC*TGLQLSAKEVVLGR
Trigger: GCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAAGACAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676743.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPGCCTG*QLSAKE
Trigger: CTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS TCA 90 bp CACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGCGAATCACCTTTTCCTTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HRLAALRKGGGSGPP*HDHSLRESPFPSFL
Trigger: GAGGAAGGAAGGAAAAGGTGATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676743.1
ENST00000677034.1
ENST00000677128.1
ENST00000677169.1
ENST00000677338.1
ENST00000677423.1
ENST00000677530.1
ENST00000677788.1
ENST00000677903.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 90 bp TCCTTGTCTCTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SLSLLTFMLPKAEGC*TGLQLSAKEVVLGR
Trigger: GCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAGAGACAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000677530.1
ENST00000677788.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 90 bp CCGTCCTTGTCTCTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTaGTGCACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSLSLLTFMLPKAEG*CTGLQLSAKEVVLG
Trigger: GCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAGAGACAAGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000677530.1
ENST00000677788.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 90 bp GCTCTCGATTTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: ALDLLTFMLPKAEGC*TGLQLSAKEVVLGR
Trigger: GCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAAATCGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS GCA 90 bp CCTTGTTCACTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PCSLLTFMLPKAEGC*TGLQLSAKEVVLGR
Trigger: GCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAGTGAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS GCA 90 bp GAGGAAGTCATGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTaGACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: EEVMLTFMLPKAEGC*TGLQLSAKEVVLGR
Trigger: GCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCATGACTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS-3UTR CAA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCGGCTCCTCTCCTCATaGCGCCAGGAGCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNARLLSS*RQEQLQ
Trigger: CTGCAGCTGCTCCTGGCGCAATGAGGAGAGGAGCCG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAACCTTGCTGCCGTCCTaGTCTCTGCTAACTTTCATG +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPTLLPS*SLLTFM
Trigger: CATGAAAGTTAGCAGAGACAAGGACGGCAGCAAGGT...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS GCA 90 bp GGAGCTCTCGATTTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTaGTGCACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GALDLLTFMLPKAEG*CTGLQLSAKEVVLG
Trigger: GCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAAATCGAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS GCA 90 bp CGTCCTTGTTCACTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTaGTGCACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RPCSLLTFMLPKAEG*CTGLQLSAKEVVLG
Trigger: GCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAGTGAACAAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS GCA 90 bp GTGGAGGAAGTCATGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTaGTGCACCGGCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VEEVMLTFMLPKAEG*CTGLQLSAKEVVLG
Trigger: GCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCATGACTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS GCA 90 bp GCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCCAATCCTGGATGATTCTGAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ACLDPAQELPPLLSP*CRPCLQSWMILRSS
Trigger: TGAACTCCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCATCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCACAAGATGGCTCACAGTaGTCTTTCTGGGTACTGGTT +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPQDGSQ*SFWVLV
Trigger: AACCAGTACCCAGAAAGACAACTGTGAGCCATCTTG...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGGTGAAGGAAGAGGGTaGGGTACTGAAATAAAGACC +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPGEGRG*GTEIKT
Trigger: GGTCTTTATTTCAGTACCCAACCCTCTTCCTTCACC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS GCA 90 bp TGTATAGCTGACTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTTGCTGCCGTCCTTGTCTCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: CIADFLWPVWTLPRS*HHCCHLAAVLVSAN
Trigger: GTTAGCAGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000677530.1
ENST00000677788.1
ENST00000678245.1
ENST00000678439.1
CDS CCA 90 bp TGTTGTTCTGCAGCCTCTGCTGGTGATACACAGGCAACCAGGGTCTaGAGTGGAACTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: CCSAASAGDTQATRV*SGTPANSNRPAAEG
Trigger: TCCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGTTCCACTCCAGACCCTGGTTGCCTGTGTATCACCAGCAGAGGCTGCAGAACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CAA 90 bp GCAGGAGGGCTGCCAACAGACTCCACTTCCGAACCCTCTGGAGGACGAGACCCAGAGTTCCAAACTTTATaGACCTCCCTGGGTTACGAA +
Preference number: 5 (lower is better)
Translates to: AGGLPTDSTSEPSGGRDPEFQTL*TSLGYE
Trigger: TTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACTC...TGGGTCTCGTCCTCCAGAGGGTTCGGAAGTGGAGTCTGTTGGCAGCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS TCA 90 bp GCTTGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATCACCTTTTCCTTCCTTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ACSSPQRRWFWAALT*SLSSRITFSFLPPF
Trigger: AAAAGGAGGAAGGAAGGAAAAGGTGATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676743.1
ENST00000677034.1
ENST00000677128.1
ENST00000677169.1
ENST00000677338.1
ENST00000677423.1
ENST00000677530.1
ENST00000677788.1
ENST00000677903.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 90 bp TGTATAGCTGACTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTTGCTGCCGTCCTTGTCTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: CIADFLWPVWTLPRS*HHCCHLAAVLVSCK
Trigger: TTTACAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCACGAGTCTCACGCTaGAAGAGAAAGGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSRVSR*KRKGDG
Trigger: CCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQGCCTG*QLSAKE
Trigger: CTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: WLDYSVWQLCILFPEHSPGCCTG*QLSAKE
Trigger: CTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCC...TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPTTVVT*LPSLSL
Trigger: CAGAGACAAGGACGGCAGCAAGGTGACAACAGTGGT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS GCA 90 bp TGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTGCTaGCGTCCTTGTCTCCAATCCTGGATGATTCTGAGGAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: CLDPAQELPPLLSPC*RPCLQSWMILRSSK
Trigger: TTTTGAACTCCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIGCCTG*QLSAKE
Trigger: CTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPTTVVT*LPSLSL
Trigger: CAGAGACAAGGACGGCAGCAAGGTGACAACAGTGGT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACTCGGACCAGCTGCTTaGCACTTCCAAAGTCACAGA +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLGPAA*HFQSHR
Trigger: TCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGAG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTGGGCTCATCAGCCTTaGACCTCAGCAGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVWAHQP*TSAASS
Trigger: TGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCCA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGACGCTTGCTGGGCAGTaGGATCTGAATGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVTLAGQ*DLNAGP
Trigger: TGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGT...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCTCGGACCAGCTGCTTaGCACTTCCAAAGTCACAGA +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVLGPAA*HFQSHR
Trigger: TCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGAG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAGTTACCAGCTAACCTaGGAAGGCATGTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNASYQLT*EGMWGR
Trigger: CCTTCCCCACATGCCTTCCAAGGTTAGCTGGTAACT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTACGCTTGCTGGGCAGTaGGATCTGAATGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTTLAGQ*DLNAGP
Trigger: TGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGT...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATGGAAGCTGCACCTCTaGGGGCTACACAATGGAATA +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPWKLHL*GLHNGI
Trigger: TATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTCCTTCCTTTGTCACTaGGCCCGGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGSFLCH*ARAAAA
Trigger: CGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGGA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264235.13
CDS-3UTR CAA 90 bp TCTAGCTTTCTCATGATCTGGAGCTCTCGATTCTTAAATCTCTTGTCCTGCAATGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SSFLMIWSSRFLNLLSCNGCCTG*QLSAKE
Trigger: CTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCC...ATTGCAGGACAAGAGATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CAA 90 bp TGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: WLDYSVWQLCILFPEHSPELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000676910.1
ENST00000678013.1
ENST00000678439.1
ENST00000679201.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCAGTTACCAGCTAACCTaGGAAGGCATGTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSSYQLT*EGMWGR
Trigger: CCTTCCCCACATGCCTTCCAAGGTTAGCTGGTAACT...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCGGCAGGACAACTCTCTaGGAGAGTCACACACACAGT +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSGRTTL*ESHTHS
Trigger: ACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGCC...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCACAAGATGGCTCACAGTaGTCTTTCTGGGTACTGGTT +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPQDGSQ*SFWVLV
Trigger: AACCAGTACCCAGAAAGACAACTGTGAGCCATCTTG...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS GCA 90 bp AATAATAAAGTCTGGATCTCCCCCTTCATGCTCTCGCTCAGCTCTTaGCATGTGATGCACCTACTCGCCCTTCACCTTCTGCCCATGATT +
Preference number: 5 (lower is better)
Translates to: NNKVWISPFMLSLSS*HVMHLLALHLLPMI
Trigger: AATCATGGGCAGAAGGTGAAGGGCGAGTAGGTGCATCACATGGCAAGAGCTGAGCGAGAGCATGAAGGGGGAGATCCAGACTTTATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676650.1
ENST00000677530.1
CDS GCA 90 bp CCCCGCTGTGACGAAGCTTCCAGAGGAAGATCAGGCAGCAATATTTaGTGTTCTGCAGTATTTGTTGTTCTGCAGCCTCTGCTGGTGATA +
Preference number: 5 (lower is better)
Translates to: PRCDEASRGRSGSNI*CSAVFVVLQPLLVI
Trigger: TATCACCAGCAGAGGCTGCAGAACAACAAATACTGCAGAACAGCAAATATTGCTGCCTGATCTTCCTCTGGAAGCTTCGTCACAGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS CCA 90 bp AAGCTAACTGGTAAGACCTCAGAAAGCCCAGTGAACAGGCCCATGTaGCAAGGGACCAAAGTCTGCCAACAATCACATAGTACACTTGGG +
Preference number: 5 (lower is better)
Translates to: KLTGKTSESPVNRPM*QGTKVCQQSHSTLG
Trigger: CCCAAGTGTACTATGTGATTGTTGGCAGACTTTGGTCCCTTGCCACATGGGCCTGTTCACTGGGCTTTCTGAGGTCTTACCAGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CTTGACATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: LDINHRERLFGSTIVSGNCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...GTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CAA 90 bp CGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: RLFGSTIVSGNSVYCFRNCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...GTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGAGTTCCAAACTTTATaGACCTCCCTGGGTTACGAA +
Preference number: 5 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPEFQTL*TSLGYE
Trigger: TTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACTC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTCAAGATGGCTCACAGTaGTCTTTCTGGGTACTGGTT +
Preference number: 5 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNAQDGSQ*SFWVLV
Trigger: AACCAGTACCCAGAAAGACAACTGTGAGCCATCTTG...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGGGCTAAGAGTTCCCTaGTTAAAACAACAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPGLRVP*LKQQSS
Trigger: AGAGGACTGTTGTTTTAACAAGGGAACTCTTAGCCC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATCCTCTCAGAAACCTTaGCATTGGTGCAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSSQKP*HWCRQD
Trigger: ATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGGA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCTGGAAGCTGCACCTCTaGGGGCTACACAATGGAATA +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSWKLHL*GLHNGI
Trigger: TATTCCATTGTGTAGCCCCAAGAGGTGCAGCTTCCA...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGCAAACACAACATGTGTaGGTTACCTGGGAGGTACAG +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVQTQHV*VTWEVQ
Trigger: CTGTACCTCCCAGGTAACCAACACATGTTGTGTTTG...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCAAACACAACATGTGTaGGTTACCTGGGAGGTACAG +
Preference number: 5 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPQTQHV*VTWEVQ
Trigger: CTGTACCTCCCAGGTAACCAACACATGTTGTGTTTG...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS TCA 90 bp ATATTTGCTGTTCTGCAGTATTTGTTGTTCTGCAGCCTCTGCTGGTaGTACACAGGCAACCAGGGTCTGGAGTGGAACTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: IFAVLQYLLFCSLCW*YTGNQGLEWNSSKL
Trigger: GAGTTTGCTGGAGTTCCACTCCAGACCCTGGTTGCCTGTGTATCACCAGCAGAGGCTGCAGAACAACAAATACTGCAGAACAGCAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS CCA 90 bp AAGTCACTCCTCAGACCAATCCACTCCACGATGAATACGGTGACATaGACCCATCCAAGGTATGGAGGGAGTATCCAAAAGCCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KSLLRPIHSTMNTVT*THPRYGGSIQKPKV
Trigger: GACTTTTGGCTTTTGGATACTCCCTCCATACCTTGGATGGGTCCATGTCACCGTATTCATCGTGGAGTGGATTGGTCTGAGGAGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS-3UTR CAA 90 bp CACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: HHWSRRNNAIGLCYSDLAELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...AGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR CAA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: STPLSPGNIGCPSNSSANQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...GTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678013.1
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGTCCTTCAATTCTCCTaGCTTTCCAAGGAATATTGC +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPVLQFS*LSKEYC
Trigger: GCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGAC...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGGCAGGACAACTCTCTaGGAGAGTCACACACACAGT +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQGRTTL*ESHTHS
Trigger: ACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGCC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAACAACAGTCCTCTATaGGCACGGTGGCACTCCGTG +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDINNSPL*ARWHSV
Trigger: CACGGAGTGCCACCGTGCCAATAGAGGACTGTTGTT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCTCTCAGAAACCTTaGCATTGGTGCAGACAAGAT +
Preference number: 5 (lower is better)
Translates to: SNTTCVGYLGGTAPLFVVSSQKP*HWCRQD
Trigger: ATCTTGTCTGCACCAATGCAAAGGTTTCTGAGAGGA...CACCACGAACAGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCGTACTGGTTGTCATTTaGCTTTTATTGCAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPVLVVI*LLLQRC
Trigger: GCACCTCTGCAATAAAAGCAAAATGACAACCAGTAC...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGAGGTGGATTACTaGACAGTTCTTAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSPEVDY*TVLSPR
Trigger: CCTTGGACTAAGAACTGTCAAGTAATCCACCTCTGG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676910.1
CDS-3UTR CAA 90 bp CCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACACACAGCTCGGACCAGCTGCTTaGCATTACCTTCCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PLSPGNIGCPSNSSANTQLGPAA*HYLPKS
Trigger: TGACTTTGGAAGGTAATGCAAAGCAGCTGGTCCGAG...CTGTGTGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676733.1
CDS-3UTR CAA 90 bp ACCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCAAAGACTTCGTCCTCTaGGCTTTTCACTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: TWEVQPHCSWCPYILQRPKDFVL*AFHSFC
Trigger: ACAAAAGGAGTGAAAAGCCAAGAGGACGAAGTCTTT...GGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR CAA 90 bp TGGCGACCAGTTCTCCTGAATCACAAAGTTTGGCTTGATATACCACACCAAATGTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: WRPVLLNHKVWLDIPHQMCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...CATTTGGTGTGGTATATCAAGCCAAACTTTGTGATTCAGGAGAACTGGTCGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CAA 90 bp CTTGACATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LDINHRERLFGSTIVSGNSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...GTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTATGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CAA 90 bp ACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: TDPHHYPLEILVVLVTAQQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...CTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGGCAGGACAACTCTCTaGGAGAGTCACACACACAGT +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIGRTTL*ESHTHS
Trigger: ACTGTGTGTGTGACTCTCCAAGAGAGTTGTCCTGCC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAAGTGTTTGCAATAGTTaGTATACAACCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPSVCNS*YTTHSP
Trigger: AGGACTGTGGGTTGTATACAAACTATTGCAAACACT...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATAGCTGTTCTGCAGTATTaGTTGTTCTGCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: KSQGASVWLDYSVWQLCIAVLQY*LFCSLC
Trigger: GCAGAGGCTGCAGAACAACAAATACTGCAGAACAGC...TATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CAA 90 bp TTATGGACTCTGGGGAGTATACCACGTCCAGAGCAGTGTCTGCATCCAAACGCTAACGGGGGCAAATACTaGATTGAAAATGAGTACTTC +
Preference number: 5 (lower is better)
Translates to: LWTLGSIPRPEQCLHPNANGGKY*IENEYF
Trigger: GAAGTACTCATTTTCAATCAAGTATTTGCCCCCGTT...AGCGTTTGGATGCAGACACTGCTCTGGACGTGGTATACTCCCCAGAGTCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR CAA 90 bp ATAAATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: INHRERLFGSTIVSGNSVSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...TACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676775.1
ENST00000678350.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGATGATACACATTTCTTaGTCTGCCACACCTGCCACC +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQMIHIS*SATPAT
Trigger: GGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCAT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGTGCCTGAGTCTTGCTaGCTGCTTCCCCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGVPESC*LLPLWQ
Trigger: CTGCCAGAGGGGAAGCAGCAAGCAAGACTCAGGCAC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTGGGCTCATCAGCCTTaGACCTCAGCAGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWWAHQP*TSAASS
Trigger: TGAGCTAGCTGCTGAGGTCAAAGGCTGATGAGCCCA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTAACAACAGTCCTCTATaGGCACGGTGGCACTCCGTG +
Preference number: 5 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPNNSPL*ARWHSV
Trigger: CACGGAGTGCCACCGTGCCAATAGAGGACTGTTGTT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGAACAACAGTCCTCTATaGGCACGGTGGCACTCCGTG +
Preference number: 5 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWNNSPL*ARWHSV
Trigger: CACGGAGTGCCACCGTGCCAATAGAGGACTGTTGTT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CCTGGGAGGTACAGCCCCACTGTTCGTGGTGTCCATATATTTTACAGAGACCCCTTGGCCAAACTTCCTTaGGAAGATTCCAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: PGRYSPTVRGVHIFYRDPLAKLP*EDSKVK
Trigger: TTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCAA...GGGGTCTCTGTAAAATATATGGACACCACGAACAGTGGGGCTGTACCTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp GATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCATTGGCCAAACTTCCTTaGGAAGATTCCAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: DCRGREIVCSSAPLSPSPLAKLP*EDSKVK
Trigger: TTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCAA...TGGGGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATGAGCAGACTCAAACACAACATGTGTTGGTTACCTGGGAGGTACAGCCCCACTGTACTGGTTGTCATTTaGCTTTTATTGCAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: MSRLKHNMCWLPGRYSPTVLVVI*LLLQRC
Trigger: GCACCTCTGCAATAAAAGCAAAATGACAACCAGTAC...AGTGGGGCTGTACCTCCCAGGTAACCAACACATGTTGTGTTTGAGTCTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS GCA 90 bp AGTACCCTACTAAAGGGCCTCAGCACATTAAATGCATCTAGAAGATaGCCAAGTTCAAAACCAACGGAGGAGGCAGTGTTCAAATGCCTA +
Preference number: 5 (lower is better)
Translates to: STLLKGLSTLNASRR*PSSKPTEEAVFKCL
Trigger: TAGGCATTTGAACACTGCCTCCTCCGTTGGTTTTGAACTTGGGCATCTTCTAGATGCATTTAATGTGCTGAGGCCCTTTAGTAGGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGELPPL*SPCCRP
Trigger: AGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTC...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFCIADF*WPVWTL
Trigger: CAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACA...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676775.1
ENST00000677128.1
ENST00000678350.1
ENST00000678608.1
CDS-3UTR CAA 90 bp ATCTGGAGCTCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTAAAATGTCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: IWSSRFIDLGTLEAPTKMSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGAGCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACTCGGACCAGCTGCTTaGCACTTCCAAAGTCACAGA +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSILGPAA*HFQSHR
Trigger: TCTGTGACTTTGGAAGTGCAAAGCAGCTGGTCCGAG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CAGGACCTTGATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATCAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: QDLDYFYQLIHTTIPWKYQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...ATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677995.1
CDS-3UTR CAA 90 bp CCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTCAGCCAACATATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: PHHYPLEILVVLVTAQPTYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...TGTTGGCTGAGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGTCGTGGGAGAGAGATaGTATGTTCTAGTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIVVGER*YVLVLR
Trigger: GCGGAGCACTAGAACATACAATCTCTCTCCCACGAC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGAGTTCCAAACTTTATaGACCTCCCTGGGTTACGAA +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQEFQTL*TSLGYE
Trigger: TTCGTAACCCAGGGAGGTCAATAAAGTTTGGAACTC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGGGCTAAGAGTTCCCTaGTTAAAACAACAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQGLRVP*LKQQSS
Trigger: AGAGGACTGTTGTTTTAACAAGGGAACTCTTAGCCC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAGATTGTCGTGGGAGAGAGATTGTATGTTCTAGTGCTCCGCTTTCCCCCTCCCCAGAGGTGGATTACTaGACAGTTCTTGATTATTTC +
Preference number: 5 (lower is better)
Translates to: KDCRGREIVCSSAPLSPSPEVDY*TVLDYF
Trigger: GAAATAATCAAGAACTGTCAAGTAATCCACCTCTGG...GGAGGGGGAAAGCGGAGCACTAGAACATACAATCTCTCTCCCACGACAATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678013.1
CDS-3UTR CAA 90 bp CAACAAGAGGTTCTGCGGTTTAATATCCCGATGGCAGATTCCAAAGGAATGGATTCTGGAGCTCTCGATTaGCTAACTTTCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QQEVLRFNIPMADSKGMDSGALD*LTFMLP
Trigger: TGGCAGCATGAAAGTTAGCAAATCGAGAGCTCCAGA...ATCCATTCCTTTGGAATCTGCCATCGGGATATTAAACCGCAGAACCTCTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS TCA 90 bp TGTCTTCTGACTCTCTCTGCTATACCACAACATAGAGATGACATCTaGGCTTCCATGCATAGGCTCCCCTTAAATCTCTTGTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: CLLTLSAIPQHRDDI*ASMHRLPLNLLSCN
Trigger: ATTGCAGGACAAGAGATTTAAGGGGAGCCTATGCATGGAAGCTCAGATGTCATCTCTATGTTGTGGTATAGCAGAGAGAGTCAGAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676722.1
ENST00000678608.1
CDS CCA 90 bp TGCACAAAGTTCGTTTCCCTTTCAGTATTATCTCAGCAGCAGCAATaGTGCCAGTCTCAGAGGGGATGGAAATTTCCTTGTGTCTATTGT +
Preference number: 5 (lower is better)
Translates to: CTKFVSLSVLSQQQQ*CQSQRGWKFPCVYC
Trigger: ACAATAGACACAAGGAAATTTCCATCCCCTCTGAGACTGGCACCATTGCTGCTGCTGAGATAATACTGAAAGGGAAACGAACTTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678121.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTCACGAGTCTCACGCTaGAAGAGAAAGGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGSRVSR*KRKGDG
Trigger: CCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTGA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000678439.1
CDS-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGACCTTGCTGCCGTCCTaGTCTCTGCTAACTTTCATG +
Preference number: 5 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWTLLPS*SLLTFM
Trigger: CATGAAAGTTAGCAGAGACAAGGACGGCAGCAAGGT...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATACAGATATACGAAACATaGGGTTCTCCTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIQIYET*GSPRTS
Trigger: GCTGGTCCGAGGAGAACCCAATGTTTCGTATATCTG...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTAGTAACAGCTTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: PTDPHHYPLEILVVLVTAYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...AGCTGTTACTAGGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678678.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGGTCCTTCAATTCTCCTaGCTTTCCAAGGAATATTGC +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQVLQFS*LSKEYC
Trigger: GCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGAC...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCACGCTTGCTGGGCAGTaGGATCTGAATGCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGTLAGQ*DLNAGP
Trigger: TGGACCTGCATTCAGATCCAACTGCCCAGCAAGCGT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGGGCTAAGAGTTCCCTaGTTAAAACAACAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIGLRVP*LKQQSS
Trigger: AGAGGACTGTTGTTTTAACAAGGGAACTCTTAGCCC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CATCTTTCTTCTCACCACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACGTTCTGCAGTATTTGTaGTTCTGCAGCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLSSHHWSRRNNAIGLCYVLQYL*FCSLCW
Trigger: CCAGCAGAGGCTGCAGAACAACAAATACTGCAGAAC...GTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTGGTGAGAAGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CAA 90 bp AATCACAGGGAGCGTCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACATCAGGCAGCAATATTaGCTGTTCTGCAGTATTTGT +
Preference number: 5 (lower is better)
Translates to: NHRERLFGSTIVSGNSVYIRQQY*LFCSIC
Trigger: ACAAATACTGCAGAACAGCAAATATTGCTGCCTGAT...GTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGACGCTCCCTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CAA 90 bp TGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAGTCCAAGGGCCTTAAATCTCTaGTCCTGCAATACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: WLDYSVWQLCILFPEHSPRALNL*SCNTFL
Trigger: CAAGAAAGTATTGCAGGACAAGAGATTTAAGGCCCT...TGGACTATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676775.1
CDS TCA 90 bp AGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCAGCAGTCCTCAACCTTTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: RNNAIGLCYSDLAFS*SGALDSAVLNLFGT
Trigger: TGTGCCAAAAAGGTTGAGGACTGCTGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676566.1
CDS TCA 90 bp AGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCCGCACTTTCGCTTTCCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: RNNAIGLCYSDLAFS*SGALDSALSLSTVS
Trigger: TGAAACTGTGGAAAGCGAAAGTGCGGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677502.1
CDS-3UTR CAA 90 bp TCTGTTTGGCTCGACTATAGTGTCTGGCAACTCTGTATACTGTTTCCGGAACATAAAGACTTCGTCCTCTaGGCTTTTCACTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SVWLDYSVWQLCILFPEHKDFVL*AFHSFC
Trigger: ACAAAAGGAGTGAAAAGCCAAGAGGACGAAGTCTTT...ATGTTCCGGAAACAGTATACAGAGTTGCCAGACACTATAGTCGAGCCAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTAAAGACTTCGTCCTCTaGGCTTTTCACTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIKDFVL*AFHSFC
Trigger: ACAAAAGGAGTGAAAAGCCAAGAGGACGAAGTCTTT...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLTTVVT*LPSLSL
Trigger: CAGAGACAAGGACGGCAGCAAGGTGACAACAGTGGT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp GTCTTCTGCCTTGCTGGAATGAACACACGATGTTTCAAAAATAGTAACCTTTGGTCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VFCLAGMNTRCFKNSNLWSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...CCAAAGGTTACTATTTTTGAAACATCGTGTGTTCATTCCAGCAAGGCAGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TCTAGCTTTCTCATGATCTGGAGCTCTCGATTCTTAAATCTCTTGTCCTGCAATTCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SSFLMIWSSRFLNLLSCNSCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...ATTGCAGGACAAGAGATTTAAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATATCCTGCAATACTTTCTaGATGGCGACCAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISCNTF*MATSSP
Trigger: AGGAGAACTGGTCGCCATCAAGAAAGTATTGCAGGA...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAATGATACACATTTCTTaGTCTGCCACACCTGCCACC +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIMIHIS*SATPAT
Trigger: GGTGGCAGGTGTGGCAGACAAAGAAATGTGTATCAT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGGACTAAGTATGAAATGAAACCGGTCTCACTGCTACCGAGGAGGAAAGACATTGTACTGGTTGTCATTTaGCTTTTATTGCAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WTKYEMKPVSLLPRRKDIVLVVI*LLLQRC
Trigger: GCACCTCTGCAATAAAAGCAAAATGACAACCAGTAC...AATGTCTTTCCTCCTCGGTAGCAGTGAGACCGGTTTCATTTCATACTTAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAGGTGAAGGAAGAGGGTaGGGTACTGAAATAAAGACC +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSIGEGRG*GTEIKT
Trigger: GGTCTTTATTTCAGTACCCAACCCTCTTCCTTCACC...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp TCTCGATTCATAGATCTTGGTACATTGGAGGCTCCCACTAAAATGTTGCAGAGGCTCCCCTTAAATCTCTaGTCCTGCAATACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRFIDLGTLEAPTKMLQRLPLNL*SCNTFL
Trigger: CAAGAAAGTATTGCAGGACAAGAGATTTAAGGGGAG...CCTCTGCAACATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGAATCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCACCTTGCTGCCGTCCTaGTTCACTGCTAACTTTCAT +
Preference number: 5 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFTLLPS*FTANFH
Trigger: ATGAAAGTTAGCAGTGAACAAGGACGGCAGCAAGGT...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS GCA 90 bp ACAAAGTTCGTTTCCCTTTCAGTATTATCTCAGCAGCAGCAATGGTaGCAGTCTCAGAGGGGATGGAAATTTCCTTGTGTCTATTGTTTA +
Preference number: 5 (lower is better)
Translates to: TKFVSLSVLSQQQQW*QSQRGWKFPCVYCL
Trigger: TAAACAATAGACACAAGGAAATTTCCATCCCCTCTGAGACTGGCACCATTGCTGCTGCTGAGATAATACTGAAAGGGAAACGAACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678121.1
CDS-3UTR CAA 90 bp CACACAGTGGTGAGCTTTTACTCAACAATGAATGCACACAACATGACTGCCTTATATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: HTVVSFYSTMNAHNMTALYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...TAAGGCAGTCATGTTGTGTGCATTCATTGTTGAGTAAAAGCTCACCACTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR CAA 90 bp GATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTCCTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: DYFYQLIHTTIPWKYWLSYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...GGACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678377.1
ENST00000678678.1
CDS-3UTR CAA 90 bp GTCACGCTAATTGGTATGTGTACAGGCCCAAGTGATCCATCGGCAACACATTTATTGGCCAAACTTCCTTaGGAAGATTCCAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: VTLIGMCTGPSDPSATHLLAKLP*EDSKVK
Trigger: TTTAACTTTGGAATCTTCCAAAGGAAGTTTGGCCAA...TAAATGTGTTGCCGATGGATCACTTGGGCCTGTACACATACCAATTAGCGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp AAAAGGGAGGCAAGATCGTGGTCTGTTGGCCAGGTTGTAGTAAAAGTTACAACCATACTATTGAGGTCTTaGATTCTTAGTCCAAGGATG +
Preference number: 5 (lower is better)
Translates to: KREARSWSVGQVVVKVTTILLRS*ILSPRM
Trigger: CATCCTTGGACTAAGAATCAAAGACCTCAATAGTAT...GGTTGTAACTTTTACTACAACCTGGCCAACAGACCACGATCTTGCCTCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676844.1
ENST00000678064.1
CDS-3UTR CAA 90 bp TATATCCAGAGGTTTGTGAAACCCCTTTTGTGGCCCAAGACCTCAGCTAAACAGATTAGCATCTCTGTTTaGCAAATAGGAGAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: YIQRFVKPLLWPKTSAKQISISV*QIGERK
Trigger: CTTCCTTTCTCCTATTTGCAAAACAGAGATGCTAAT...CTGTTTAGCTGAGGTCTTGGGCCACAAAAGGGGTTTCACAAACCTCTGGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678439.1
CDS TCA 90 bp AGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTATTGTGTGATTCCAGGATGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: RNNAIGLCYSDLAFS*SGALDYCVIPGWAN
Trigger: ATTTGCCCATCCTGGAATCACACAATAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676775.1
CDS-3UTR CAA 90 bp TGTTTCCTTTGCTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCTATGTGTAGTTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: CFLCCAEAFYLDVVPMCSYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...ACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR CAA 90 bp CTTGATTATTTCTACCAACTGATCCACACCACTATCCCCTGGAAATATTGGTTGTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: LDYFYQLIHTTIPWKYWLYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...CAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676733.1
ENST00000677995.1
ENST00000678377.1
ENST00000678678.1
CDS-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCATAGATCTTGGTACATaGGAGGCTCCCACTAAAATG +
Preference number: 5 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFIDLGT*EAPTKM
Trigger: CATTTTAGTGGGAGCCTCCAATGTACCAAGATCTAT...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678608.1
CDS-3UTR CAA 90 bp CCCAGGACCTTTATGGATGAATCTCACACAGTGGTGAGCTTTTACTCAACAATGAGTTTTGCTGTTGATTaGCATTTATTTCACCTGGGT +
Preference number: 5 (lower is better)
Translates to: PRTFMDESHTVVSFYSTMSFAVD*HLFHLG
Trigger: ACCCAGGTGAAATAAATGCAAATCAACAGCAAAACT...CATTGTTGAGTAAAAGCTCACCACTGTGTGAGATTCATCCATAAAGGTCCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677483.1
CDS-3UTR CAA 90 bp TGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCAAAAGACTTCGTCCTCTaGGCTTTTCACTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: WSRRNNAIGLCYSDLAFSKDFVL*AFHSFC
Trigger: ACAAAAGGAGTGAAAAGCCAAGAGGACGAAGTCTTT...TGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS-3UTR CAA 90 bp TTCTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: FSHFVNCLFSLLTVSFAVYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...CACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR CAA 90 bp CATCATCCAGTATTGGAAATGAGCAGACTCAAACACAACATGTGTTGGTTACCTAGTGTTTGCAATAGTTaGTATACAACCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: HHPVLEMSRLKHNMCWLPSVCNS*YTTHSP
Trigger: AGGACTGTGGGTTGTATACAAACTATTGCAAACACT...AGGTAACCAACACATGTTGTGTTTGAGTCTGCTCATTTCCAATACTGGATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp AGACCCATGGTTAGGGCTTGTGGAAGAGACGAGCAAAATTTAATCTATTCGATAAGTGTTTGCAATAGTTaGTATACAACCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: RPMVRACGRDEQNLIYSISVCNS*YTTHSP
Trigger: AGGACTGTGGGTTGTATACAAACTATTGCAAACACT...TATCGAATAGATTAAATTTTGCTCGTCTCTTCCACAAGCCCTAACCATGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp TGTTTCCTTTGCTGTGCAGAAGCTTTTTATCTTGATGTGGTCCCTATGTGTAGTCAGAAGCTTTTTATCTaGATGTGGTCCCTATGTGTA +
Preference number: 5 (lower is better)
Translates to: CFLCCAEAFYLDVVPMCSQKLFI*MWSLCV
Trigger: TACACATAGGGACCACATCAAGATAAAAAGCTTCTG...ACTACACATAGGGACCACATCAAGATAAAAAGCTTCTGCACAGCAAAGGAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR CAA 90 bp CTCCCATTTTGTGAATTGTCTCTTCAGTCTGTTAACTGTTTCCTTTGCTGTGCACAGAAGCTTTTTATCTaGATGTGGTCCCTATGTGTA +
Preference number: 5 (lower is better)
Translates to: LPFCELSLQSVNCFLCCAQKLFI*MWSLCV
Trigger: TACACATAGGGACCACATCAAGATAAAAAGCTTCTG...TGCACAGCAAAGGAAACAGTTAACAGACTGAAGAGACAATTCACAAAATGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677648.1
CDS-3UTR CAA 90 bp CACTGGAGTAGAAGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCGGGATCTTAAATCTCTaGTCCTGCAATACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: HWSRRNNAIGLCYSDLAFGILNL*SCNTFL
Trigger: CAAGAAAGTATTGCAGGACAAGAGATTTAAGATCCC...GAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCTTCTACTCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCAAAGACTTCGTCCTCTaGGCTTTTCACTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGKDFVL*AFHSFC
Trigger: ACAAAAGGAGTGAAAAGCCAAGAGGACGAAGTCTTT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS TCA 90 bp AGAAATAACGCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCTTTCAGAAAAGCATTCTATCATTTG +
Preference number: 5 (lower is better)
Translates to: RNNAIGLCYSDLAFS*SGALDSFRKAFYHL
Trigger: CAAATGATAGAATGCTTTTCTGAAAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGCGTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677870.1
CDS-3UTR CAA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCTATCCCCTGGAAATATaGGTTGTCCTAGTAACAGCT +
Preference number: 5 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLYPLEI*VVLVTA
Trigger: AGCTGTTACTAGGACAACCAATATTTCCAGGGGATA...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCGTCCTTCAATTCTCCTaGCTTTCCAAGGAATATTGC +
Preference number: 5 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLVLQFS*LSKEYC
Trigger: GCAATATTCCTTGGAAAGCAAGGAGAATTGAAGGAC...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000678439.1
CDS-3UTR CAA 90 bp ATTGTTACAATAATACAGGCCGGTACCTACTGTACAGAGTTAAAACTATATGGCATACATCATCCAGTATaGGAAATGAGCAGACTCAAA +
Preference number: 5 (lower is better)
Translates to: IVTIIQAGTYCTELKLYGIHHPV*EMSRLK
Trigger: TTTGAGTCTGCTCATTTCCAATACTGGATGATGTAT...GCCATATAGTTTTAACTCTGTACAGTAGGTACCGGCCTGTATTATTGTAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS-3UTR CAA 90 bp CTTAACAAATCTACTAAGAATCTTCCCTGTAGAGTTCCAAACTTTATTGACCTCATACATCATCCAGTATaGGAAATGAGCAGACTCAAA +
Preference number: 5 (lower is better)
Translates to: LNKSTKNLPCRVPNFIDLIHHPV*EMSRLK
Trigger: TTTGAGTCTGCTCATTTCCAATACTGGATGATGTAT...GAGGTCAATAAAGTTTGGAACTCTACAGGGAAGATTCTTAGTAGATTTGTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000316626.6
CDS TCA 72 bp CGCTGCAGCTCCGGCAAGCCGCGGGATCCGGCGGGCTaGCGGCAGGGGCCCGGCGAACTAGAGGGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: RCSSGKPRDPAG*RQGPGELEGGG
Trigger: TCCGCCGCCCTCTAGTTCGCCGGGCCCCTGCCGTCAGCCCGCCGGATCCCGCGGCTTGCCGGAGCTGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS CAA 90 bp GGCTGCGGGGCCGGCTCCTCCTCGCTTCCTTCCTTCCTTTGTCACTaGGCCCGGGCGGCGGCGGCGGCGGCGGCGGCACAAGCCCGCATT +
Preference number: 6 (lower is better)
Translates to: GCGAGSSSLPSFLCH*ARAAAAAAAAQARI
Trigger: AATGCGGGCTTGTGCCGCCGCCGCCGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGGAAGGAAGCGAGGAGGAGCCGGCCCCGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS CAA 90 bp TGTCAGCGGCTGCGGGGCCGGCTCCTCCTCGCTTCCTTCCTTCCTTaGTCACTTGGCCCGGGCGGCGGCGGCGGCGGCGGCGGCACAAGC +
Preference number: 6 (lower is better)
Translates to: CQRLRGRLLLASFLP*SLGPGGGGGGGGTS
Trigger: GCTTGTGCCGCCGCCGCCGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGGAAGGAAGCGAGGAGGAGCCGGCCCCGCAGCCGCTGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS GCA 72 bp CGGCAACAGCTCGGCCGCCCTCCCGCCCCTCGGCTCTaGTCGGTGCCCGCTCAGGAAGTGTCCGCGCTTTGC +
Preference number: 6 (lower is better)
Translates to: RQQLGRPPAPRL*SVPAQEVSALC
Trigger: GCAAAGCGCGGACACTTCCTGAGCGGGCACCGAGCAGAGCCGAGGGGCGGGAGGGCGGCCGAGCTGTTGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS CCA 72 bp CCGGCTCCTCCTCGCTTCCTTCCTTCCTTTGTCACTTaGCCCGGGCGGCGGCGGCGGCGGCGGCGGCACAAG +
Preference number: 6 (lower is better)
Translates to: PAPPRFLPSFVT*PGRRRRRRRHK
Trigger: CTTGTGCCGCCGCCGCCGCCGCCGCCGCCCGGGCCAAGTGACAAAGGAAGGAAGGAAGCGAGGAGGAGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS GCA 72 bp GAGGGAGGGAGAGGGAGGGAGGGGGTGGCTCGGAGATaGGACGGGAAACGCTGCAGCTCCGGCAAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: EGGRGREGVARR*DGKRCSSGKPR
Trigger: CCGCGGCTTGCCGGAGCTGCAGCGTTTCCCGTCGCATCTCCGAGCCACCCCCTCCCTCCCTCTCCCTCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS CAA 72 bp GCTCTGCTCGGTGCCCGCTCAGGAAGTGTCCGCGCTTaGCCCCAGCCCAGAGCCCTGTCAGCGGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: ALLGARSGSVRA*PQPRALSAAAG
Trigger: CCCCGCAGCCGCTGACAGGGCTCTGGGCTGGGGCAAAGCGCGGACACTTCCTGAGCGGGCACCGAGCAGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264235.13
ENST00000677034.1
CDS GCA 72 bp TCATGCTGCCAAAAGCTGAAGGCTGCTGCACCGGCTTaGAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SCCQKLKAAAPA*SSPQRRWFWAA
Trigger: GGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676743.1
ENST00000677034.1
ENST00000677128.1
ENST00000677169.1
ENST00000677338.1
ENST00000677423.1
ENST00000677530.1
ENST00000677788.1
ENST00000677903.1
ENST00000678245.1
ENST00000678439.1
CDS CCA 72 bp AGGATCACGAGTCTCACGCTTGAAGAGAAAGGGGGATaGGTAGGAGGGAGGGAGAGGGAGGGAGGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RITSLTLEEKGG*VGGREREGGGG
Trigger: GCCACCCCCTCCCTCCCTCTCCCTCCCTCCTACCCATCCCCCTTTCTCTTCAAGCGTGAGACTCGTGATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264235.13
ENST00000677034.1
ENST00000677423.1
CDS CAA 72 bp GCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTCTCCAATCCTGG +
Preference number: 6 (lower is better)
Translates to: ACLDPAQELPPL*SPCCRPCLQSW
Trigger: CCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS GCA 72 bp GACTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTTGCTGCCGTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: DFLWPVWTLPRS*HHCCHLAAVLV
Trigger: GACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676650.1
ENST00000676722.1
ENST00000676775.1
ENST00000677034.1
ENST00000677530.1
ENST00000677788.1
ENST00000677878.1
ENST00000678245.1
ENST00000678350.1
ENST00000678439.1
ENST00000678608.1
ENST00000678787.1
ENST00000679131.1
CDS CAA 90 bp CTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTGACATG +
Preference number: 6 (lower is better)
Translates to: LLTFMLPKAEGCCTG*QLSAKEVVLGRPDM
Trigger: CATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000677128.1
ENST00000677530.1
ENST00000677788.1
ENST00000678245.1
ENST00000678439.1
CDS CAA 90 bp TTGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTGACATG +
Preference number: 6 (lower is better)
Translates to: LLTFMLPKAEGCCTG*QLSAKEVVLGRPDM
Trigger: CATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676743.1
ENST00000677169.1
CDS CAA 90 bp ATGCTAACTTTCATGCTGCCAAAAGCTGAAGGCTGCTGCACCGGCTaGCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTGACATG +
Preference number: 6 (lower is better)
Translates to: MLTFMLPKAEGCCTG*QLSAKEVVLGRPDM
Trigger: CATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGCAAGCCGGTGCAGCAGCCTTCAGCTTTTGGCAGCATGAAAGTTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS CAA 90 bp GGCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCCAATCCTGGATGATTCTGAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GLSGPCPGVATTVVT*LPSLSPILDDSEEF
Trigger: GAACTCCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS GCA 72 bp GACTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTaGCACCACTGTTGTCACCTTGCTGCCGTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: DFLWPVWTLPRS*HHCCHLAAVLV
Trigger: AACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS CAA 72 bp GCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTTCACTGCTAACT +
Preference number: 6 (lower is better)
Translates to: ACLDPAQELPPL*SPCCRPCSLLT
Trigger: AGTTAGCAGTGAACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS CAA 72 bp GCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTCTCCTAAAGGAA +
Preference number: 6 (lower is better)
Translates to: ACLDPAQELPPL*SPCCRPCLLKE
Trigger: TTCCTTTAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676650.1
CDS CAA 90 bp CTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTCTCCAATCCTGGATGATTCTG +
Preference number: 6 (lower is better)
Translates to: LLVACLDPAQELPPL*SPCCRPCLQSWMIL
Trigger: CAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS TCA 72 bp GCAGCTCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTaGCATGATCACTCTCTTCGCGAATCACCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: AALRKGGGSGPP*HDHSLRESPFP
Trigger: AGGAAAAGGTGATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676743.1
ENST00000677034.1
ENST00000677128.1
ENST00000677169.1
ENST00000677338.1
ENST00000677423.1
ENST00000677530.1
ENST00000677788.1
ENST00000677903.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 72 bp GTCTGGATCTCCCCCTTCATGCTCTCGCTCAGCTCTTaGCATGTGATGCACCTACTCGCCCTTCACCTTCTG +
Preference number: 6 (lower is better)
Translates to: VWISPFMLSLSS*HVMHLLALHLL
Trigger: CAGAAGGTGAAGGGCGAGTAGGTGCATCACATGGCAAGAGCTGAGCGAGAGCATGAAGGGGGAGATCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676650.1
ENST00000677530.1
CDS GCA 72 bp CCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTGCTaGCGTCCTTGTCTCCAATCCTGGATGATTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PAQELPPLLSPC*RPCLQSWMILR
Trigger: CCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS GCA 72 bp GACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCCAATCCTGGATGATTCTG +
Preference number: 6 (lower is better)
Translates to: DPAQELPPLLSP*CRPCLQSWMIL
Trigger: CAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS CAA 72 bp GGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCCAATCCTGGATGATTCT +
Preference number: 6 (lower is better)
Translates to: GPCPGVATTVVT*LPSLSPILDDS
Trigger: AGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS CAA 72 bp GGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCCTTTATCCATACTGCTG +
Preference number: 6 (lower is better)
Translates to: GPCPGVATTVVT*LPSLSPLSILL
Trigger: CAGCAGTATGGATAAAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679131.1
CDS CAA 90 bp CTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTTCACTGCTAACTTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: LLVACLDPAQELPPL*SPCCRPCSLLTFML
Trigger: CAGCATGAAAGTTAGCAGTGAACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS GCA 72 bp CCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTGCTaGCGTCCTTGTTCACTGCTAACTTTCATGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PAQELPPLLSPC*RPCSLLTFMLP
Trigger: TGGCAGCATGAAAGTTAGCAGTGAACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS GCA 72 bp GACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTaGTGCCGTCCTTGTTCACTGCTAACTTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: DPAQELPPLLSP*CRPCSLLTFML
Trigger: CAGCATGAAAGTTAGCAGTGAACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677128.1
CDS CAA 72 bp GGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCCTAAAGGAAGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: GPCPGVATTVVT*LPSLSPKGRKE
Trigger: TTCCTTTCTTCCTTTAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676650.1
CDS CAA 90 bp CTTCTTGTGGCCTGTCTGGACCCTGCCCAGGAGTTGCCACCACTGTaGTCACCTTGCTGCCGTCCTTGTCTCCTAAAGGAAGAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: LLVACLDPAQELPPL*SPCCRPCLLKEERK
Trigger: TTTCCTTTCTTCCTTTAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676650.1
CDS TCA 72 bp TCTCCGCAAAGGAGGTGGTTCTGGGCCGCCCTGACATaGTCACTCTCTTCGCGAATCACCTTTTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SPQRRWFWAALT*SLSSRITFSFL
Trigger: AAGGAAGGAAAAGGTGATTCGCGAAGAGAGTGATCATGTCAGGGCGGCCCAGAACCACCTCCTTTGCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676743.1
ENST00000677034.1
ENST00000677128.1
ENST00000677169.1
ENST00000677338.1
ENST00000677423.1
ENST00000677530.1
ENST00000677788.1
ENST00000677903.1
ENST00000678245.1
ENST00000678439.1
CDS GCA 72 bp GACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTaGTGCCGTCCTTGTCTCCTAAAGGAAGAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: DPAQELPPLLSP*CRPCLLKEERK
Trigger: TTTCCTTTCTTCCTTTAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676650.1
CDS CAA 72 bp GGACCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTaGCTGCCGTCCTTGTCTCCTGTAAACAACATTTTG +
Preference number: 6 (lower is better)
Translates to: GPCPGVATTVVT*LPSLSPVNNIL
Trigger: CAAAATGTTGTTTACAGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CAA 90 bp CCCTGCCCAGGAGTTGCCACCACTGTTGTCACCTTGCTGCCGTCCTaGTCTCCAATCCTGGATGATTCTGAGGAGTTCAAAACTTCAGTG +
Preference number: 6 (lower is better)
Translates to: PCPGVATTVVTLLPS*SPILDDSEEFKTSV
Trigger: CACTGAAGTTTTGAACTCCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCCTGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS CCA 72 bp TCCAATCACTTTAGTGTCTGTATAGCTGACTTCTTGTaGCCTGTCTGGACCCTGCCCAGGAGTTGCCACCAC +
Preference number: 6 (lower is better)
Translates to: SNHFSVCIADFL*PVWTLPRSCHH
Trigger: GTGGTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACAGACACTAAAGTGATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676650.1
ENST00000676722.1
ENST00000676775.1
ENST00000677034.1
ENST00000677128.1
ENST00000677530.1
ENST00000677788.1
ENST00000677878.1
ENST00000678245.1
ENST00000678350.1
ENST00000678439.1
ENST00000678608.1
ENST00000678787.1
ENST00000679131.1
CDS TCA 72 bp GGTTTCACAGTGGTAGCCAGGATGGTCTTGATCTCCTaGCCTCGTGATTTACCCACTTCAGCCTCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GFTVVARMVLIS*PRDLPTSASQS
Trigger: ACTTTGGGAGGCTGAAGTGGGTAAATCACGAGGTCAGGAGATCAAGACCATCCTGGCTACCACTGTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677788.1
CDS CAA 72 bp GGTAAGGCACTGGAGAGTCTGTCTAGATTCGAATCCTaGCTCATCCATCCACTTGCCAACTGTGTGACCCTG +
Preference number: 6 (lower is better)
Translates to: GKALESLSRFES*LIHPLANCVTL
Trigger: CAGGGTCACACAGTTGGCAAGTGGATGGATGAGCAAGGATTCGAATCTAGACAGACTCTCCAGTGCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CAA 72 bp GGAGTTGCCACCACTGTTGTCACCTTGCTGCCGTCCTaGTCTCCAATCCTGGATGATTCTGAGGAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: GVATTVVTLLPS*SPILDDSEEFK
Trigger: TTTGAACTCCTCAGAATCATCCAGGATTGGAGACAAGGACGGCAGCAAGGTGACAACAGTGGTGGCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677034.1
CDS GCA 72 bp CCAGTGAACAGGCCCATGTGGCAAGGGACCAAAGTCTaGCAACAATCACATAGTACACTTGGGGACAGATAT +
Preference number: 6 (lower is better)
Translates to: PVNRPMWQGTKV*QQSHSTLGDRY
Trigger: ATATCTGTCCCCAAGTGTACTATGTGATTGTTGGCAGACTTTGGTCCCTTGCCACATGGGCCTGTTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CCA 72 bp CTCAGACCAATCCACTCCACGATGAATACGGTGACATaGACCCATCCAAGGTATGGAGGGAGTATCCAAAAG +
Preference number: 6 (lower is better)
Translates to: LRPIHSTMNTVT*THPRYGGSIQK
Trigger: CTTTTGGATACTCCCTCCATACCTTGGATGGGTCCATGTCACCGTATTCATCGTGGAGTGGATTGGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CCA 72 bp CAAGGGAGGAGAATAATCCATCTTATGGGCAGTAGGTaGCAGCAGAAAAGATTTCCTGACGCTGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: QGRRIIHLMGSR*QQKRFPDAAVA
Trigger: TGCCACAGCAGCGTCAGGAAATCTTTTCTGCTGCCACCTACTGCCCATAAGATGGATTATTCTCCTCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678439.1
CDS CAA 72 bp ATTTCCAATCACTTTAGTGTCTGTATAGCTGACTTCTaGTGGCCTGTCTGGACCCTGCCCAGGAGTTGCCAC +
Preference number: 6 (lower is better)
Translates to: ISNHFSVCIADF*WPVWTLPRSCH
Trigger: GTGGCAACTCCTGGGCAGGGTCCAGACAGGCCACAAGAAGTCAGCTATACAGACACTAAAGTGATTGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000264235.13
ENST00000316626.6
ENST00000650344.2
ENST00000676650.1
ENST00000676722.1
ENST00000676775.1
ENST00000677034.1
ENST00000677128.1
ENST00000677530.1
ENST00000677788.1
ENST00000677878.1
ENST00000678245.1
ENST00000678350.1
ENST00000678439.1
ENST00000678608.1
ENST00000678787.1
ENST00000679131.1
CDS CAA 90 bp AACTGTGGTTTCTGTCTTGGGCTTACTGTTTTTCCAGTGGCTCCCTaGCCATGTAGGAAGCTAACTGGTAAGACCTCAGAAAGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: NCGFCLGLTVFPVAP*PCRKLTGKTSESPV
Trigger: CACTGGGCTTTCTGAGGTCTTACCAGTTAGCTTCCTACATGGCAAGGGAGCCACTGGAAAAACAGTAAGCCCAAGACAGAAACCACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CAA 90 bp CTTTCTCATGATCTGGAGCTCTCGATTCAGCAGTCCTCAACCTTTTaGGCACAAGGGACCAGTTCCATAGAAGACTATTTTTCCACGGAC +
Preference number: 6 (lower is better)
Translates to: LSHDLELSIQQSSTF*AQGTSSIEDYFSTD
Trigger: GTCCGTGGAAAAATAGTCTTCTATGGAACTGGTCCCTTGTGCCAAAAAGGTTGAGGACTGCTGAATCGAGAGCTCCAGATCATGAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676566.1
CDS TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCCGCACTTTCGCTTTCC +
Preference number: 6 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDSALSLS
Trigger: GGAAAGCGAAAGTGCGGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677502.1
CDS GCA 72 bp GACGAAGCTTCCAGAGGAAGATCAGGCAGCAATATTTaGTGTTCTGCAGTATTTGTTGTTCTGCAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: DEASRGRSGSNI*CSAVFVVLQPL
Trigger: CAGAGGCTGCAGAACAACAAATACTGCAGAACAGCAAATATTGCTGCCTGATCTTCCTCTGGAAGCTTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS CAA 72 bp TTCTGTCTTGGGCTTACTGTTTTTCCAGTGGCTCCCTaGCCATGTAGGAAGCTAACTGGTAAGACCTCAGAA +
Preference number: 6 (lower is better)
Translates to: FCLGLTVFPVAP*PCRKLTGKTSE
Trigger: TTCTGAGGTCTTACCAGTTAGCTTCCTACATGGCAAGGGAGCCACTGGAAAAACAGTAAGCCCAAGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCAGCAGTCCTCAACCTT +
Preference number: 6 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDSAVLNL
Trigger: AAGGTTGAGGACTGCTGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676566.1
CDS TCA 72 bp GTTCGGGGTCGGAAGACCTTGATTATTTCTACCAACTaGTCCACACCACTATCCCCTGGAAATATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: VRGRKTLIISTN*STPLSPGNIGC
Trigger: ACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGTCTTCCGACCCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678561.1
CDS GCA 72 bp TTCCAGAGGAAGATCAGGCAGCAATATTTGCTGTTCTaGAGTATTTGTTGTTCTGCAGCCTCTGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: FQRKIRQQYLLF*SICCSAASAGD
Trigger: ATCACCAGCAGAGGCTGCAGAACAACAAATACTGCAGAACAGCAAATATTGCTGCCTGATCTTCCTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678350.1
CDS CCA 72 bp TTCGTTTCCCTTTCAGTATTATCTCAGCAGCAGCAATaGTGCCAGTCTCAGAGGGGATGGAAATTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: FVSLSVLSQQQQ*CQSQRGWKFPC
Trigger: ACAAGGAAATTTCCATCCCCTCTGAGACTGGCACCATTGCTGCTGCTGAGATAATACTGAAAGGGAAACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678121.1
CDS TCA 72 bp CATAGTGACAGAGGCTTAATTACACCCGGTGTCTTCTaGCTCTCTCTGCTATACCACAACATAGAGATGACA +
Preference number: 6 (lower is better)
Translates to: HSDRGLITPGVF*LSLLYHNIEMT
Trigger: TGTCATCTCTATGTTGTGGTATAGCAGAGAGAGTCAGAAGACACCGGGTGTAATTAAGCCTCTGTCACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676722.1
ENST00000678608.1
CDS CAA 90 bp TCAGCAGCAGCAATGGTGCCAGTCTCAGAGGGGATGGAAATTTCCTaGTGTCTATTGTTTAAGTTCTTAGAAAGGGTTTATAGGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SAAAMVPVSEGMEIS*CLLFKFLERVYRAL
Trigger: TAGAGCCCTATAAACCCTTTCTAAGAACTTAAACAATAGACACAAGGAAATTTCCATCCCCTCTGAGACTGGCACCATTGCTGCTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678121.1
CDS TCA 72 bp AGTACAATATTCAGATATCAAGATCCAGTGGGCATTTaGCAACATGAGACTAGTACTTGGGGGAGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: STIFRYQDPVGI*QHETSTWGRGE
Trigger: CTCACCTCTCCCCCAAGTACTAGTCTCATGTTGTCAAATGCCCACTGGATCTTGATATCTGAATATTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTTGCTAACTTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDLLTFML
Trigger: CAGCATGAAAGTTAGCAAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677169.1
CDS TCA 72 bp CCTGTTCCTGACGAATCCTTGATTATTTCTACCAACTaGTCCACACCACTATCCCCTGGAAATATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: PVPDESLIISTN*STPLSPGNIGC
Trigger: ACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGATTCGTCAGGAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677046.1
CDS TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTATTGTGTGATTCCAGGA +
Preference number: 6 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDYCVIPG
Trigger: TCCTGGAATCACACAATAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676775.1
CDS TCA 72 bp GAATTTCTGGGGGACACCTTGATTATTTCTACCAACTaGTCCACACCACTATCCCCTGGAAATATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: EFLGDTLIISTN*STPLSPGNIGC
Trigger: ACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGTGTCCCCCAGAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676948.1
CDS TCA 72 bp GCAATCGGACTATGTTACAGTGATCTAGCTTTCTCATaGTCTGGAGCTCTCGATTCTTTCAGAAAAGCATTC +
Preference number: 6 (lower is better)
Translates to: AIGLCYSDLAFS*SGALDSFRKAF
Trigger: GAATGCTTTTCTGAAAGAATCGAGAGCTCCAGATCATGAGAAAGCTAGATCACTGTAACATAGTCCGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677870.1
CDS CAA 72 bp GTCCATGCTGATGAACACTTAGGTTGCTTCCAAATCTaGGCTATTGTGAAGAGTGCTGCAATAAACATAGGA +
Preference number: 6 (lower is better)
Translates to: VHADEHLGCFQI*AIVKSAAINIG
Trigger: TCCTATGTTTATTGCAGCACTCTTCACAATAGCCAAGATTTGGAAGCAACCTAAGTGTTCATCAGCATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677788.1
CDS TCA 72 bp TTGTATGCCAATTACCCCTTGATTATTTCTACCAACTaGTCCACACCACTATCCCCTGGAAATATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: LYANYPLIISTN*STPLSPGNIGC
Trigger: ACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGGGGTAATTGGCATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677069.1
ENST00000677788.1
CDS GCA 72 bp AGGTTGCTTCCAAATCTTGGCTATTGTGAAGAGTGCTaGAATAAACATAGGAGTGCAGATACCTGTTCAATA +
Preference number: 6 (lower is better)
Translates to: RLLPNLGYCEEC*NKHRSADTCSI
Trigger: TATTGAACAGGTATCTGCACTCCTATGTTTATTGCAGCACTCTTCACAATAGCCAAGATTTGGAAGCAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677788.1
CDS GCA 72 bp AGAAGCAGATGTCTGCACCACACTTCCTGTACAGTTTaGAGAATTGTGAGCCAATTAAACCTCTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: RSRCLHHTSCTV*RIVSQLNLFSL
Trigger: TAAAGAAAAGAGGTTTAATTGGCTCACAATTCTGCAAACTGTACAGGAAGTGTGGTGCAGACATCTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676650.1
ENST00000677530.1
CDS CCA 72 bp GAGATAACAGTACAATATTCAGATATCAAGATCCAGTaGGCATTTGACAACATGAGACTAGTACTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: EITVQYSDIKIQ*AFDNMRLVLGG
Trigger: TCCCCCAAGTACTAGTCTCATGTTGTCAAATGCCCACTGGATCTTGATATCTGAATATTGTACTGTTATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS CAA 72 bp TTATATCCCTTCATGTTTACCATAGATCTTGGTACATaGGAGGCTCCCACTAAAATGTTGCAGAGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: LYPFMFTIDLGT*EAPTKMLQRLE
Trigger: TTCCAACCTCTGCAACATTTTAGTGGGAGCCTCCAATGTACCAAGATCTATGGTAAACATGAAGGGATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676722.1
CDS TCA 72 bp CTCTCTTATGAGGTTTTCTTGATTATTTCTACCAACTaGTCCACACCACTATCCCCTGGAAATATTGGTTGT +
Preference number: 6 (lower is better)
Translates to: LSYEVFLIISTN*STPLSPGNIGC
Trigger: ACAACCAATATTTCCAGGGGATAGTGGTGTGGATCAGTTGGTAGAAATAATCAAGAAAACCTCATAAGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679085.1
CDS CCA 72 bp CAAAATAGTAATAACAATAATAATAATAATAAAGTCTaGATCTCCCCCTTCATGCTCTCGCTCAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: QNSNNNNNNNKV*ISPFMLSLSSC
Trigger: GCAAGAGCTGAGCGAGAGCATGAAGGGGGAGATCCAGACTTTATTATTATTATTATTGTTATTACTATTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676650.1
ENST00000677530.1
CDS CAA 72 bp ATGATCAATGATGTTGAGCACCTCTCATATACCTGTTaGCCATCTGTATGTATCCTTTTGAATAATGTCTAT +
Preference number: 6 (lower is better)
Translates to: MINDVEHLSYTC*PSVCILLNNVY
Trigger: ATAGACATTATTCAAAAGGATACATACAGATGGCAAACAGGTATATGAGAGGTGCTCAACATCATTGATCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677788.1
CDS CAA 72 bp AAAGTTACAACCTATAATTCTGGCACTAAAATACTATaGAGGTCTTTGATTCTTAGTCCAAGGATGTGCCTT +
Preference number: 6 (lower is better)
Translates to: KVTTYNSGTKIL*RSLILSPRMCL
Trigger: AAGGCACATCCTTGGACTAAGAATCAAAGACCTCAATAGTATTTTAGTGCCAGAATTATAGGTTGTAACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676844.1
ENST00000678064.1